HEADER TRANSFERASE 28-MAR-18 6G4Y
TITLE CRYSTAL STRUCTURE OF MURINE NF-KAPPAB INDUCING KINASE (NIK) IN COMPLEX
TITLE 2 WITH COMPOUND 1A
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14;
COMPND 3 CHAIN: A, B;
COMPND 4 SYNONYM: NF-KAPPA-BETA-INDUCING KINASE,SERINE/THREONINE-PROTEIN
COMPND 5 KINASE NIK;
COMPND 6 EC: 2.7.11.25;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS;
SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE;
SOURCE 4 ORGANISM_TAXID: 10090;
SOURCE 5 GENE: MAP3K14, NIK;
SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA;
SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM;
SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108
KEYWDS PROTEIN SERINE/THREONINE KINASE, NF-KAPPAB, MAP3K14, TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR A.J.HOLE,S.G.HYMOWITZ,P.A.MCEWAN
REVDAT 4 08-MAY-24 6G4Y 1 REMARK
REVDAT 3 22-AUG-18 6G4Y 1 TITLE JRNL
REVDAT 2 01-AUG-18 6G4Y 1 JRNL
REVDAT 1 04-JUL-18 6G4Y 0
JRNL AUTH N.BLAQUIERE,G.M.CASTANEDO,J.D.BURCH,L.M.BEREZHKOVSKIY,
JRNL AUTH 2 H.BRIGHTBILL,S.BROWN,C.CHAN,P.C.CHIANG,J.J.CRAWFORD,T.DONG,
JRNL AUTH 3 P.FAN,J.FENG,N.GHILARDI,R.GODEMANN,E.GOGOL,A.GRABBE,
JRNL AUTH 4 A.J.HOLE,B.HU,S.G.HYMOWITZ,M.H.ALAOUI ISMAILI,H.LE,P.LEE,
JRNL AUTH 5 W.LEE,X.LIN,N.LIU,P.A.MCEWAN,B.MCKENZIE,H.L.SILVESTRE,
JRNL AUTH 6 E.SUTO,S.SUJATHA-BHASKAR,G.WU,L.C.WU,Y.ZHANG,Z.ZHONG,
JRNL AUTH 7 S.T.STABEN
JRNL TITL SCAFFOLD-HOPPING APPROACH TO DISCOVER POTENT, SELECTIVE, AND
JRNL TITL 2 EFFICACIOUS INHIBITORS OF NF-KAPPA B INDUCING KINASE.
JRNL REF J. MED. CHEM. V. 61 6801 2018
JRNL REFN ISSN 1520-4804
JRNL PMID 29940120
JRNL DOI 10.1021/ACS.JMEDCHEM.8B00678
REMARK 2
REMARK 2 RESOLUTION. 2.65 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.8.0189
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 143.80
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 3 NUMBER OF REFLECTIONS : 26274
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.198
REMARK 3 R VALUE (WORKING SET) : 0.196
REMARK 3 FREE R VALUE : 0.249
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100
REMARK 3 FREE R VALUE TEST SET COUNT : 1408
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.65
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.72
REMARK 3 REFLECTION IN BIN (WORKING SET) : 1894
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0
REMARK 3 BIN R VALUE (WORKING SET) : 0.3110
REMARK 3 BIN FREE R VALUE SET COUNT : 124
REMARK 3 BIN FREE R VALUE : 0.3620
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 5054
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 92
REMARK 3 SOLVENT ATOMS : 83
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.99
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -2.64000
REMARK 3 B22 (A**2) : -2.64000
REMARK 3 B33 (A**2) : 5.27000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.526
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.300
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.240
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 24.843
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5287 ; 0.008 ; 0.019
REMARK 3 BOND LENGTHS OTHERS (A): 4932 ; 0.001 ; 0.020
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7163 ; 1.309 ; 1.996
REMARK 3 BOND ANGLES OTHERS (DEGREES): 11472 ; 0.915 ; 3.000
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 649 ; 5.785 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 219 ;35.279 ;23.379
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 908 ;14.821 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;15.527 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 763 ; 0.065 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5857 ; 0.004 ; 0.021
REMARK 3 GENERAL PLANES OTHERS (A): 1033 ; 0.001 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2602 ; 1.020 ; 3.410
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2601 ; 1.020 ; 3.409
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3246 ; 1.880 ; 5.106
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3247 ; 1.879 ; 5.108
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2685 ; 0.823 ; 3.632
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2685 ; 0.822 ; 3.632
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3917 ; 1.522 ; 5.413
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5690 ; 3.903 ;40.105
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5681 ; 3.872 ;40.087
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 2
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 334 A 675
REMARK 3 ORIGIN FOR THE GROUP (A): 192.3391 20.8781 3.3872
REMARK 3 T TENSOR
REMARK 3 T11: 0.0630 T22: 0.0870
REMARK 3 T33: 0.0171 T12: -0.0103
REMARK 3 T13: 0.0209 T23: 0.0185
REMARK 3 L TENSOR
REMARK 3 L11: 3.9980 L22: 1.2810
REMARK 3 L33: 0.5096 L12: -0.6657
REMARK 3 L13: 0.1656 L23: -0.1568
REMARK 3 S TENSOR
REMARK 3 S11: 0.0339 S12: -0.2126 S13: -0.0786
REMARK 3 S21: 0.0309 S22: -0.0245 S23: 0.0808
REMARK 3 S31: -0.0872 S32: 0.1137 S33: -0.0094
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 334 B 675
REMARK 3 ORIGIN FOR THE GROUP (A): 163.6649 49.0317 -2.2381
REMARK 3 T TENSOR
REMARK 3 T11: 0.1495 T22: 0.0495
REMARK 3 T33: 0.0640 T12: 0.0340
REMARK 3 T13: 0.0399 T23: -0.0193
REMARK 3 L TENSOR
REMARK 3 L11: 3.3861 L22: 2.0845
REMARK 3 L33: 1.1181 L12: 1.0317
REMARK 3 L13: 0.4253 L23: 0.4367
REMARK 3 S TENSOR
REMARK 3 S11: -0.0859 S12: 0.1144 S13: -0.1111
REMARK 3 S21: -0.1431 S22: 0.1895 S23: -0.1450
REMARK 3 S31: -0.0904 S32: 0.1406 S33: -0.1036
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : NULL
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS
REMARK 4
REMARK 4 6G4Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-MAR-18.
REMARK 100 THE DEPOSITION ID IS D_1200008448.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 14-AUG-12
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 6.2
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : DIAMOND
REMARK 200 BEAMLINE : I04-1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.92
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : AIMLESS
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27695
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650
REMARK 200 RESOLUTION RANGE LOW (A) : 143.800
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0
REMARK 200 DATA REDUNDANCY : 6.700
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.9000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.78
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 59.81
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.3-0.9M AMMONIUM SULPHATE, 0.05-0.1M
REMARK 280 SODIUM CITRATE, 0.7-1.0M LITHIUM SULPHATE, PH 6.2, VAPOR
REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -Y,X,Z+3/4
REMARK 290 4555 Y,-X,Z+1/4
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 22.80700
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.21050
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 11.40350
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 GLY A 327
REMARK 465 SER A 328
REMARK 465 ALA A 329
REMARK 465 LEU A 330
REMARK 465 GLU A 331
REMARK 465 LYS A 332
REMARK 465 VAL A 333
REMARK 465 SER A 364
REMARK 465 GLY A 365
REMARK 465 SER A 366
REMARK 465 ALA A 367
REMARK 465 LYS A 368
REMARK 465 LEU A 369
REMARK 465 GLN A 370
REMARK 465 ARG A 371
REMARK 465 LEU A 372
REMARK 465 GLY A 373
REMARK 465 PRO A 374
REMARK 465 GLU A 375
REMARK 465 THR A 376
REMARK 465 GLU A 377
REMARK 465 PRO A 545
REMARK 465 ASP A 546
REMARK 465 GLY A 547
REMARK 465 LEU A 548
REMARK 465 GLY A 549
REMARK 465 LYS A 550
REMARK 465 GLY B 327
REMARK 465 SER B 328
REMARK 465 ALA B 329
REMARK 465 LEU B 330
REMARK 465 GLU B 331
REMARK 465 LYS B 332
REMARK 465 VAL B 333
REMARK 465 SER B 364
REMARK 465 GLY B 365
REMARK 465 SER B 366
REMARK 465 ALA B 367
REMARK 465 LYS B 368
REMARK 465 LEU B 369
REMARK 465 GLN B 370
REMARK 465 ARG B 371
REMARK 465 LEU B 372
REMARK 465 GLY B 373
REMARK 465 PRO B 374
REMARK 465 GLU B 375
REMARK 465 THR B 376
REMARK 465 GLU B 377
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 TRP A 362 42.08 -93.54
REMARK 500 TYR A 395 86.52 -156.90
REMARK 500 VAL A 399 -59.50 -130.00
REMARK 500 GLN A 405 -77.30 -29.55
REMARK 500 ARG A 407 82.55 -69.26
REMARK 500 ASP A 517 59.41 -163.69
REMARK 500 ASP A 536 86.21 62.40
REMARK 500 ASP A 576 -163.29 -129.64
REMARK 500 TRP A 598 -29.59 74.12
REMARK 500 PRO A 674 -173.78 -61.75
REMARK 500 GLN B 405 -99.54 4.69
REMARK 500 ARG B 407 96.17 -65.76
REMARK 500 CYS B 428 -157.81 -149.60
REMARK 500 ASP B 517 61.50 -159.93
REMARK 500 ASP B 536 89.83 62.43
REMARK 500 GLN B 544 171.29 -58.30
REMARK 500 ASP B 576 -163.95 -123.79
REMARK 500 TRP B 598 -25.97 75.07
REMARK 500 PRO B 605 109.22 -39.94
REMARK 500 PRO B 616 44.50 -74.17
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 701
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 702
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue ELZ A 703
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 701
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 702
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue ELZ B 703
DBREF 6G4Y A 329 675 UNP Q9WUL6 M3K14_MOUSE 329 675
DBREF 6G4Y B 329 675 UNP Q9WUL6 M3K14_MOUSE 329 675
SEQADV 6G4Y GLY A 327 UNP Q9WUL6 EXPRESSION TAG
SEQADV 6G4Y SER A 328 UNP Q9WUL6 EXPRESSION TAG
SEQADV 6G4Y GLY B 327 UNP Q9WUL6 EXPRESSION TAG
SEQADV 6G4Y SER B 328 UNP Q9WUL6 EXPRESSION TAG
SEQRES 1 A 349 GLY SER ALA LEU GLU LYS VAL PRO VAL GLU GLU TYR LEU
SEQRES 2 A 349 VAL HIS ALA LEU GLN GLY SER VAL SER SER GLY GLN ALA
SEQRES 3 A 349 HIS SER LEU ALA SER LEU ALA LYS THR TRP SER SER GLY
SEQRES 4 A 349 SER ALA LYS LEU GLN ARG LEU GLY PRO GLU THR GLU ASP
SEQRES 5 A 349 ASN GLU GLY VAL LEU LEU THR GLU LYS LEU LYS PRO VAL
SEQRES 6 A 349 ASP TYR GLU TYR ARG GLU GLU VAL HIS TRP MET THR HIS
SEQRES 7 A 349 GLN PRO ARG VAL GLY ARG GLY SER PHE GLY GLU VAL HIS
SEQRES 8 A 349 ARG MET LYS ASP LYS GLN THR GLY PHE GLN CYS ALA VAL
SEQRES 9 A 349 LYS LYS VAL ARG LEU GLU VAL PHE ARG VAL GLU GLU LEU
SEQRES 10 A 349 VAL ALA CYS ALA GLY LEU SER SER PRO ARG ILE VAL PRO
SEQRES 11 A 349 LEU TYR GLY ALA VAL ARG GLU GLY PRO TRP VAL ASN ILE
SEQRES 12 A 349 PHE MET GLU LEU LEU GLU GLY GLY SER LEU GLY GLN LEU
SEQRES 13 A 349 ILE LYS GLN MET GLY CYS LEU PRO GLU ASP ARG ALA LEU
SEQRES 14 A 349 TYR TYR LEU GLY GLN ALA LEU GLU GLY LEU GLU TYR LEU
SEQRES 15 A 349 HIS THR ARG ARG ILE LEU HIS GLY ASP VAL LYS ALA ASP
SEQRES 16 A 349 ASN VAL LEU LEU SER SER ASP GLY SER ARG ALA ALA LEU
SEQRES 17 A 349 CYS ASP PHE GLY HIS ALA LEU CYS LEU GLN PRO ASP GLY
SEQRES 18 A 349 LEU GLY LYS SER LEU LEU THR GLY ASP TYR ILE PRO GLY
SEQRES 19 A 349 THR GLU THR HIS MET ALA PRO GLU VAL VAL MET GLY LYS
SEQRES 20 A 349 PRO CYS ASP ALA LYS VAL ASP ILE TRP SER SER CYS CYS
SEQRES 21 A 349 MET MET LEU HIS MET LEU ASN GLY CYS HIS PRO TRP THR
SEQRES 22 A 349 GLN TYR PHE ARG GLY PRO LEU CYS LEU LYS ILE ALA SER
SEQRES 23 A 349 GLU PRO PRO PRO ILE ARG GLU ILE PRO PRO SER CYS ALA
SEQRES 24 A 349 PRO LEU THR ALA GLN ALA ILE GLN GLU GLY LEU ARG LYS
SEQRES 25 A 349 GLU PRO VAL HIS ARG ALA SER ALA MET GLU LEU ARG ARG
SEQRES 26 A 349 LYS VAL GLY LYS ALA LEU GLN GLU VAL GLY GLY LEU LYS
SEQRES 27 A 349 SER PRO TRP LYS GLY GLU TYR LYS GLU PRO ARG
SEQRES 1 B 349 GLY SER ALA LEU GLU LYS VAL PRO VAL GLU GLU TYR LEU
SEQRES 2 B 349 VAL HIS ALA LEU GLN GLY SER VAL SER SER GLY GLN ALA
SEQRES 3 B 349 HIS SER LEU ALA SER LEU ALA LYS THR TRP SER SER GLY
SEQRES 4 B 349 SER ALA LYS LEU GLN ARG LEU GLY PRO GLU THR GLU ASP
SEQRES 5 B 349 ASN GLU GLY VAL LEU LEU THR GLU LYS LEU LYS PRO VAL
SEQRES 6 B 349 ASP TYR GLU TYR ARG GLU GLU VAL HIS TRP MET THR HIS
SEQRES 7 B 349 GLN PRO ARG VAL GLY ARG GLY SER PHE GLY GLU VAL HIS
SEQRES 8 B 349 ARG MET LYS ASP LYS GLN THR GLY PHE GLN CYS ALA VAL
SEQRES 9 B 349 LYS LYS VAL ARG LEU GLU VAL PHE ARG VAL GLU GLU LEU
SEQRES 10 B 349 VAL ALA CYS ALA GLY LEU SER SER PRO ARG ILE VAL PRO
SEQRES 11 B 349 LEU TYR GLY ALA VAL ARG GLU GLY PRO TRP VAL ASN ILE
SEQRES 12 B 349 PHE MET GLU LEU LEU GLU GLY GLY SER LEU GLY GLN LEU
SEQRES 13 B 349 ILE LYS GLN MET GLY CYS LEU PRO GLU ASP ARG ALA LEU
SEQRES 14 B 349 TYR TYR LEU GLY GLN ALA LEU GLU GLY LEU GLU TYR LEU
SEQRES 15 B 349 HIS THR ARG ARG ILE LEU HIS GLY ASP VAL LYS ALA ASP
SEQRES 16 B 349 ASN VAL LEU LEU SER SER ASP GLY SER ARG ALA ALA LEU
SEQRES 17 B 349 CYS ASP PHE GLY HIS ALA LEU CYS LEU GLN PRO ASP GLY
SEQRES 18 B 349 LEU GLY LYS SER LEU LEU THR GLY ASP TYR ILE PRO GLY
SEQRES 19 B 349 THR GLU THR HIS MET ALA PRO GLU VAL VAL MET GLY LYS
SEQRES 20 B 349 PRO CYS ASP ALA LYS VAL ASP ILE TRP SER SER CYS CYS
SEQRES 21 B 349 MET MET LEU HIS MET LEU ASN GLY CYS HIS PRO TRP THR
SEQRES 22 B 349 GLN TYR PHE ARG GLY PRO LEU CYS LEU LYS ILE ALA SER
SEQRES 23 B 349 GLU PRO PRO PRO ILE ARG GLU ILE PRO PRO SER CYS ALA
SEQRES 24 B 349 PRO LEU THR ALA GLN ALA ILE GLN GLU GLY LEU ARG LYS
SEQRES 25 B 349 GLU PRO VAL HIS ARG ALA SER ALA MET GLU LEU ARG ARG
SEQRES 26 B 349 LYS VAL GLY LYS ALA LEU GLN GLU VAL GLY GLY LEU LYS
SEQRES 27 B 349 SER PRO TRP LYS GLY GLU TYR LYS GLU PRO ARG
HET SO4 A 701 5
HET SO4 A 702 5
HET ELZ A 703 36
HET SO4 B 701 5
HET SO4 B 702 5
HET ELZ B 703 36
HETNAM SO4 SULFATE ION
HETNAM ELZ 10-[2-[(3~{R})-1-METHYL-3-OXIDANYL-2-OXIDANYLIDENE-
HETNAM 2 ELZ PYRROLIDIN-3-YL]ETHYNYL]-~{N}3-(OXAN-4-YL)-5,6-
HETNAM 3 ELZ DIHYDROIMIDAZO[1,2-D][1,4]BENZOXAZEPINE-2,3-
HETNAM 4 ELZ DICARBOXAMIDE
FORMUL 3 SO4 4(O4 S 2-)
FORMUL 5 ELZ 2(C25 H27 N5 O6)
FORMUL 9 HOH *83(H2 O)
HELIX 1 AA1 PRO A 334 GLN A 344 1 11
HELIX 2 AA2 GLN A 351 LYS A 360 1 10
HELIX 3 AA3 GLU A 436 ARG A 439 5 4
HELIX 4 AA4 VAL A 440 ALA A 447 1 8
HELIX 5 AA5 LEU A 479 GLY A 487 1 9
HELIX 6 AA6 PRO A 490 ARG A 511 1 22
HELIX 7 AA7 LYS A 519 ASP A 521 5 3
HELIX 8 AA8 ALA A 566 MET A 571 1 6
HELIX 9 AA9 ALA A 577 GLY A 594 1 18
HELIX 10 AB1 PRO A 605 GLU A 613 1 9
HELIX 11 AB2 PRO A 616 ILE A 620 5 5
HELIX 12 AB3 ALA A 625 LEU A 636 1 12
HELIX 13 AB4 GLU A 639 ARG A 643 5 5
HELIX 14 AB5 SER A 645 VAL A 660 1 16
HELIX 15 AB6 VAL B 335 GLN B 344 1 10
HELIX 16 AB7 GLN B 351 LYS B 360 1 10
HELIX 17 AB8 THR B 361 SER B 363 5 3
HELIX 18 AB9 GLU B 436 ARG B 439 5 4
HELIX 19 AC1 VAL B 440 ALA B 447 1 8
HELIX 20 AC2 SER B 478 GLY B 487 1 10
HELIX 21 AC3 PRO B 490 ARG B 511 1 22
HELIX 22 AC4 LYS B 519 ASP B 521 5 3
HELIX 23 AC5 THR B 561 MET B 565 5 5
HELIX 24 AC6 ALA B 566 MET B 571 1 6
HELIX 25 AC7 ALA B 577 GLY B 594 1 18
HELIX 26 AC8 PRO B 605 GLU B 613 1 9
HELIX 27 AC9 PRO B 616 ILE B 620 5 5
HELIX 28 AD1 ALA B 625 LEU B 636 1 12
HELIX 29 AD2 SER B 645 VAL B 660 1 16
SHEET 1 AA1 7 VAL A 347 SER A 349 0
SHEET 2 AA1 7 ASN A 379 LEU A 383 1 O LEU A 383 N SER A 348
SHEET 3 AA1 7 LEU A 457 GLU A 463 -1 O ARG A 462 N GLU A 380
SHEET 4 AA1 7 TRP A 466 MET A 471 -1 O ASN A 468 N VAL A 461
SHEET 5 AA1 7 GLN A 427 ARG A 434 -1 N ALA A 429 O MET A 471
SHEET 6 AA1 7 VAL A 416 ASP A 421 -1 N HIS A 417 O VAL A 430
SHEET 7 AA1 7 TRP A 401 THR A 403 -1 N MET A 402 O LYS A 420
SHEET 1 AA2 3 GLY A 477 SER A 478 0
SHEET 2 AA2 3 VAL A 523 LEU A 525 -1 O LEU A 525 N GLY A 477
SHEET 3 AA2 3 ALA A 532 LEU A 534 -1 O ALA A 533 N LEU A 524
SHEET 1 AA3 2 ILE A 513 LEU A 514 0
SHEET 2 AA3 2 LEU A 541 CYS A 542 -1 O LEU A 541 N LEU A 514
SHEET 1 AA4 7 VAL B 347 SER B 349 0
SHEET 2 AA4 7 ASN B 379 LEU B 383 1 O LEU B 383 N SER B 348
SHEET 3 AA4 7 LEU B 457 GLU B 463 -1 O ARG B 462 N GLU B 380
SHEET 4 AA4 7 TRP B 466 MET B 471 -1 O PHE B 470 N TYR B 458
SHEET 5 AA4 7 GLN B 427 ARG B 434 -1 N LYS B 431 O ILE B 469
SHEET 6 AA4 7 VAL B 416 ASP B 421 -1 N MET B 419 O CYS B 428
SHEET 7 AA4 7 TRP B 401 THR B 403 -1 N MET B 402 O LYS B 420
SHEET 1 AA5 2 ILE B 513 LEU B 514 0
SHEET 2 AA5 2 LEU B 541 CYS B 542 -1 O LEU B 541 N LEU B 514
SHEET 1 AA6 2 VAL B 523 LEU B 525 0
SHEET 2 AA6 2 ALA B 532 LEU B 534 -1 O ALA B 533 N LEU B 524
SITE 1 AC1 4 ARG A 637 LYS A 638 GLU A 639 HIS A 642
SITE 1 AC2 2 ARG A 650 ARG A 651
SITE 1 AC3 17 ARG A 410 GLY A 411 VAL A 416 ARG A 418
SITE 2 AC3 17 ALA A 429 GLU A 442 VAL A 455 ILE A 469
SITE 3 AC3 17 MET A 471 GLU A 472 LEU A 473 LEU A 474
SITE 4 AC3 17 GLY A 477 LEU A 524 CYS A 535 ASP A 536
SITE 5 AC3 17 PHE A 537
SITE 1 AC4 4 ARG B 637 LYS B 638 GLU B 639 HIS B 642
SITE 1 AC5 4 LYS A 519 THR A 561 HIS A 596 GLN B 351
SITE 1 AC6 19 ARG B 410 GLY B 411 VAL B 416 ARG B 418
SITE 2 AC6 19 GLU B 442 VAL B 455 ILE B 469 MET B 471
SITE 3 AC6 19 GLU B 472 LEU B 474 GLU B 475 GLY B 477
SITE 4 AC6 19 SER B 478 GLN B 481 ASP B 521 LEU B 524
SITE 5 AC6 19 CYS B 535 ASP B 536 PHE B 537
CRYST1 143.829 143.829 45.614 90.00 90.00 90.00 P 43 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.006953 0.000000 0.000000 0.00000
SCALE2 0.000000 0.006953 0.000000 0.00000
SCALE3 0.000000 0.000000 0.021923 0.00000