HEADER HYDROLASE 29-MAR-18 6G5J TITLE SECRETED PHOSPHOLIPASE A2 TYPE X IN COMPLEX WITH LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: GROUP 10 SECRETORY PHOSPHOLIPASE A2; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GROUP X SECRETORY PHOSPHOLIPASE A2,SPLA2-X, COMPND 5 PHOSPHATIDYLCHOLINE 2-ACYLHYDROLASE 10; COMPND 6 EC: 3.1.1.4; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLA2G10; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PET24A KEYWDS SECRETORY PHOSPHOLIPASE A2 TYPE X SPLA2X SPLA2-X PHOSPHOLIPASE ENZYME KEYWDS 2 INHIBITOR COMPLEX, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.SANDMARK,L.OSTER REVDAT 1 05-SEP-18 6G5J 0 JRNL AUTH F.GIORDANETTO,L.KNERR,P.NORDBERG,D.PETTERSEN,N.SELMI, JRNL AUTH 2 H.G.BEISEL,H.DE LA MOTTE,A.MANSSON,M.DAHLSTROM,J.BRODDEFALK, JRNL AUTH 3 G.SAARINEN,F.KLINGEGARD,E.HURT-CAMEJO,B.ROSENGREN, JRNL AUTH 4 J.WIKSTROM,M.WAGBERG,J.BRENGDAHL,M.ROHMAN,J.SANDMARK, JRNL AUTH 5 T.AKERUD,R.G.ROTH,F.JANSEN,M.AHLQVIST JRNL TITL DESIGN OF SELECTIVE SPLA2-X INHIBITOR JRNL TITL 2 (-)-2-{2-[CARBAMOYL-6-(TRIFLUOROMETHOXY) JRNL TITL 3 -1H-INDOL-1-YL]PYRIDINE-2-YL}PROPANOIC ACID. JRNL REF ACS MED CHEM LETT V. 9 600 2018 JRNL REFN ISSN 1948-5875 JRNL PMID 30034586 JRNL DOI 10.1021/ACSMEDCHEMLETT.7B00507 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 87.6 REMARK 3 NUMBER OF REFLECTIONS : 19791 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1060 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1302 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.31 REMARK 3 BIN R VALUE (WORKING SET) : 0.3050 REMARK 3 BIN FREE R VALUE SET COUNT : 52 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1880 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 136 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.08000 REMARK 3 B22 (A**2) : 0.33000 REMARK 3 B33 (A**2) : -0.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.164 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.145 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.090 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.975 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2111 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1771 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2888 ; 1.287 ; 2.027 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4123 ; 0.946 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 253 ; 5.271 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 90 ;31.705 ;24.889 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 316 ;14.468 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ; 8.874 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 280 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2405 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 443 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 991 ; 1.025 ; 2.183 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 990 ; 1.019 ; 2.180 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1239 ; 1.633 ; 3.265 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1240 ; 1.633 ; 3.269 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1120 ; 1.452 ; 2.395 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1121 ; 1.451 ; 2.396 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1646 ; 2.413 ; 3.509 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2534 ; 3.820 ;18.181 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2534 ; 3.820 ;18.181 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6G5J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-MAR-18. REMARK 100 THE DEPOSITION ID IS D_1200009441. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6-5.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21588 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 44.150 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.47800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 37-45% PEG400 0.1M BIS-TRIS PH 5.6 REMARK 280 -5.9, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 13.98100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.53950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.75050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.53950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 13.98100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.75050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -41 REMARK 465 GLY A -40 REMARK 465 PRO A -39 REMARK 465 LEU A -38 REMARK 465 PRO A -37 REMARK 465 VAL A -36 REMARK 465 CYS A -35 REMARK 465 LEU A -34 REMARK 465 PRO A -33 REMARK 465 ILE A -32 REMARK 465 MET A -31 REMARK 465 LEU A -30 REMARK 465 LEU A -29 REMARK 465 LEU A -28 REMARK 465 LEU A -27 REMARK 465 LEU A -26 REMARK 465 PRO A -25 REMARK 465 SER A -24 REMARK 465 LEU A -23 REMARK 465 LEU A -22 REMARK 465 LEU A -21 REMARK 465 LEU A -20 REMARK 465 LEU A -19 REMARK 465 LEU A -18 REMARK 465 LEU A -17 REMARK 465 PRO A -16 REMARK 465 GLY A -15 REMARK 465 PRO A -14 REMARK 465 GLY A -13 REMARK 465 SER A -12 REMARK 465 GLY A -11 REMARK 465 GLU A -10 REMARK 465 ALA A -9 REMARK 465 SER A -8 REMARK 465 ARG A -7 REMARK 465 ILE A -6 REMARK 465 LEU A -5 REMARK 465 ARG A -4 REMARK 465 VAL A -3 REMARK 465 HIS A -2 REMARK 465 ARG A -1 REMARK 465 ARG A 0 REMARK 465 ASP A 123 REMARK 465 MET B -41 REMARK 465 GLY B -40 REMARK 465 PRO B -39 REMARK 465 LEU B -38 REMARK 465 PRO B -37 REMARK 465 VAL B -36 REMARK 465 CYS B -35 REMARK 465 LEU B -34 REMARK 465 PRO B -33 REMARK 465 ILE B -32 REMARK 465 MET B -31 REMARK 465 LEU B -30 REMARK 465 LEU B -29 REMARK 465 LEU B -28 REMARK 465 LEU B -27 REMARK 465 LEU B -26 REMARK 465 PRO B -25 REMARK 465 SER B -24 REMARK 465 LEU B -23 REMARK 465 LEU B -22 REMARK 465 LEU B -21 REMARK 465 LEU B -20 REMARK 465 LEU B -19 REMARK 465 LEU B -18 REMARK 465 LEU B -17 REMARK 465 PRO B -16 REMARK 465 GLY B -15 REMARK 465 PRO B -14 REMARK 465 GLY B -13 REMARK 465 SER B -12 REMARK 465 GLY B -11 REMARK 465 GLU B -10 REMARK 465 ALA B -9 REMARK 465 SER B -8 REMARK 465 ARG B -7 REMARK 465 ILE B -6 REMARK 465 LEU B -5 REMARK 465 ARG B -4 REMARK 465 VAL B -3 REMARK 465 HIS B -2 REMARK 465 ARG B -1 REMARK 465 ARG B 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 22 88.80 -154.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A 26 O REMARK 620 2 GLY A 28 O 92.7 REMARK 620 3 GLY A 30 O 92.0 77.5 REMARK 620 4 ASP A 47 OD1 105.9 147.9 126.3 REMARK 620 5 ASP A 47 OD2 92.0 155.7 78.5 51.4 REMARK 620 6 EM8 A 202 O23 76.5 76.9 151.4 82.3 127.3 REMARK 620 7 EM8 A 202 O23 82.0 80.3 156.7 76.8 123.9 6.7 REMARK 620 8 EM8 A 202 O6 172.4 83.7 93.9 74.4 94.0 96.1 90.8 REMARK 620 9 EM8 A 202 O6 173.5 84.0 92.8 74.6 93.3 97.2 92.0 1.2 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE B 26 O REMARK 620 2 GLY B 28 O 91.5 REMARK 620 3 GLY B 30 O 91.3 77.9 REMARK 620 4 ASP B 47 OD1 102.7 150.7 126.5 REMARK 620 5 ASP B 47 OD2 92.8 153.9 76.3 52.0 REMARK 620 6 EM8 B 202 O6 166.0 85.2 101.2 74.8 96.1 REMARK 620 7 EM8 B 202 O23 76.0 76.8 151.2 81.9 129.2 90.1 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EM8 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EM8 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EM8 B 202 DBREF 6G5J A -41 123 UNP O15496 PA2GX_HUMAN 1 165 DBREF 6G5J B -41 123 UNP O15496 PA2GX_HUMAN 1 165 SEQRES 1 A 165 MET GLY PRO LEU PRO VAL CYS LEU PRO ILE MET LEU LEU SEQRES 2 A 165 LEU LEU LEU PRO SER LEU LEU LEU LEU LEU LEU LEU PRO SEQRES 3 A 165 GLY PRO GLY SER GLY GLU ALA SER ARG ILE LEU ARG VAL SEQRES 4 A 165 HIS ARG ARG GLY ILE LEU GLU LEU ALA GLY THR VAL GLY SEQRES 5 A 165 CYS VAL GLY PRO ARG THR PRO ILE ALA TYR MET LYS TYR SEQRES 6 A 165 GLY CYS PHE CYS GLY LEU GLY GLY HIS GLY GLN PRO ARG SEQRES 7 A 165 ASP ALA ILE ASP TRP CYS CYS HIS GLY HIS ASP CYS CYS SEQRES 8 A 165 TYR THR ARG ALA GLU GLU ALA GLY CYS SER PRO LYS THR SEQRES 9 A 165 GLU ARG TYR SER TRP GLN CYS VAL ASN GLN SER VAL LEU SEQRES 10 A 165 CYS GLY PRO ALA GLU ASN LYS CYS GLN GLU LEU LEU CYS SEQRES 11 A 165 LYS CYS ASP GLN GLU ILE ALA ASN CYS LEU ALA GLN THR SEQRES 12 A 165 GLU TYR ASN LEU LYS TYR LEU PHE TYR PRO GLN PHE LEU SEQRES 13 A 165 CYS GLU PRO ASP SER PRO LYS CYS ASP SEQRES 1 B 165 MET GLY PRO LEU PRO VAL CYS LEU PRO ILE MET LEU LEU SEQRES 2 B 165 LEU LEU LEU PRO SER LEU LEU LEU LEU LEU LEU LEU PRO SEQRES 3 B 165 GLY PRO GLY SER GLY GLU ALA SER ARG ILE LEU ARG VAL SEQRES 4 B 165 HIS ARG ARG GLY ILE LEU GLU LEU ALA GLY THR VAL GLY SEQRES 5 B 165 CYS VAL GLY PRO ARG THR PRO ILE ALA TYR MET LYS TYR SEQRES 6 B 165 GLY CYS PHE CYS GLY LEU GLY GLY HIS GLY GLN PRO ARG SEQRES 7 B 165 ASP ALA ILE ASP TRP CYS CYS HIS GLY HIS ASP CYS CYS SEQRES 8 B 165 TYR THR ARG ALA GLU GLU ALA GLY CYS SER PRO LYS THR SEQRES 9 B 165 GLU ARG TYR SER TRP GLN CYS VAL ASN GLN SER VAL LEU SEQRES 10 B 165 CYS GLY PRO ALA GLU ASN LYS CYS GLN GLU LEU LEU CYS SEQRES 11 B 165 LYS CYS ASP GLN GLU ILE ALA ASN CYS LEU ALA GLN THR SEQRES 12 B 165 GLU TYR ASN LEU LYS TYR LEU PHE TYR PRO GLN PHE LEU SEQRES 13 B 165 CYS GLU PRO ASP SER PRO LYS CYS ASP HET CA A 201 1 HET EM8 A 202 58 HET EM8 A 203 29 HET PEG A 204 7 HET DMS A 205 4 HET CA B 201 1 HET EM8 B 202 29 HETNAM CA CALCIUM ION HETNAM EM8 (3~{R})-3-[3-[2-AMINOCARBONYL-6-(TRIFLUOROMETHYLOXY) HETNAM 2 EM8 INDOL-1-YL]PHENYL]BUTANOIC ACID HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM DMS DIMETHYL SULFOXIDE FORMUL 3 CA 2(CA 2+) FORMUL 4 EM8 3(C20 H17 F3 N2 O4) FORMUL 6 PEG C4 H10 O3 FORMUL 7 DMS C2 H6 O S FORMUL 10 HOH *136(H2 O) HELIX 1 AA1 GLY A 1 GLY A 13 1 13 HELIX 2 AA2 THR A 16 MET A 21 5 6 HELIX 3 AA3 ASP A 37 ALA A 56 1 20 HELIX 4 AA4 ASN A 81 GLN A 100 1 20 HELIX 5 AA5 ASN A 104 LEU A 108 5 5 HELIX 6 AA6 PRO A 111 CYS A 115 5 5 HELIX 7 AA7 ILE B 2 GLY B 13 1 12 HELIX 8 AA8 THR B 16 MET B 21 5 6 HELIX 9 AA9 ASP B 37 ALA B 56 1 20 HELIX 10 AB1 ASN B 81 GLN B 100 1 20 HELIX 11 AB2 ASN B 104 LEU B 108 5 5 HELIX 12 AB3 PRO B 111 CYS B 115 5 5 SHEET 1 AA1 2 TRP A 67 VAL A 70 0 SHEET 2 AA1 2 SER A 73 CYS A 76 -1 O SER A 73 N VAL A 70 SHEET 1 AA2 2 TRP B 67 VAL B 70 0 SHEET 2 AA2 2 SER B 73 CYS B 76 -1 O LEU B 75 N GLN B 68 SSBOND 1 CYS A 11 CYS A 69 1555 1555 2.03 SSBOND 2 CYS A 25 CYS A 115 1555 1555 2.02 SSBOND 3 CYS A 27 CYS A 43 1555 1555 2.04 SSBOND 4 CYS A 42 CYS A 97 1555 1555 2.06 SSBOND 5 CYS A 48 CYS A 122 1555 1555 2.03 SSBOND 6 CYS A 49 CYS A 90 1555 1555 2.04 SSBOND 7 CYS A 58 CYS A 83 1555 1555 2.03 SSBOND 8 CYS A 76 CYS A 88 1555 1555 2.04 SSBOND 9 CYS B 11 CYS B 69 1555 1555 2.03 SSBOND 10 CYS B 25 CYS B 115 1555 1555 2.02 SSBOND 11 CYS B 27 CYS B 43 1555 1555 2.06 SSBOND 12 CYS B 42 CYS B 97 1555 1555 2.02 SSBOND 13 CYS B 48 CYS B 122 1555 1555 2.02 SSBOND 14 CYS B 49 CYS B 90 1555 1555 2.04 SSBOND 15 CYS B 58 CYS B 83 1555 1555 2.04 SSBOND 16 CYS B 76 CYS B 88 1555 1555 2.04 LINK O PHE A 26 CA CA A 201 1555 1555 2.33 LINK O GLY A 28 CA CA A 201 1555 1555 2.33 LINK O GLY A 30 CA CA A 201 1555 1555 2.37 LINK OD1 ASP A 47 CA CA A 201 1555 1555 2.54 LINK OD2 ASP A 47 CA CA A 201 1555 1555 2.49 LINK O PHE B 26 CA CA B 201 1555 1555 2.31 LINK O GLY B 28 CA CA B 201 1555 1555 2.35 LINK O GLY B 30 CA CA B 201 1555 1555 2.35 LINK OD1 ASP B 47 CA CA B 201 1555 1555 2.54 LINK OD2 ASP B 47 CA CA B 201 1555 1555 2.40 LINK CA CA A 201 O23AEM8 A 202 1555 1555 2.48 LINK CA CA A 201 O23BEM8 A 202 1555 1555 2.45 LINK CA CA A 201 O6 AEM8 A 202 1555 1555 2.28 LINK CA CA A 201 O6 BEM8 A 202 1555 1555 2.27 LINK CA CA B 201 O6 EM8 B 202 1555 1555 2.24 LINK CA CA B 201 O23 EM8 B 202 1555 1555 2.49 CISPEP 1 GLY A 77 PRO A 78 0 -0.77 CISPEP 2 GLY B 13 PRO B 14 0 8.54 CISPEP 3 GLY B 77 PRO B 78 0 -0.82 SITE 1 AC1 5 PHE A 26 GLY A 28 GLY A 30 ASP A 47 SITE 2 AC1 5 EM8 A 202 SITE 1 AC2 19 ILE A 2 LEU A 5 ALA A 6 PRO A 17 SITE 2 AC2 19 TYR A 20 MET A 21 PHE A 26 CYS A 27 SITE 3 AC2 19 GLY A 28 LEU A 29 GLY A 30 CYS A 43 SITE 4 AC2 19 HIS A 46 ASP A 47 ILE A 94 CA A 201 SITE 5 AC2 19 HOH A 323 HOH A 356 LEU B 114 SITE 1 AC3 9 ARG A 15 THR A 16 ILE A 18 ALA A 19 SITE 2 AC3 9 TYR A 103 PHE A 109 HOH A 316 LEU B 105 SITE 3 AC3 9 LEU B 108 SITE 1 AC4 6 ARG A 64 SER A 66 PRO A 78 GLU A 80 SITE 2 AC4 6 GLN B 68 LEU B 75 SITE 1 AC5 7 LYS A 22 GLY A 24 CYS A 25 CYS A 27 SITE 2 AC5 7 GLY A 28 LEU A 29 GLY A 30 SITE 1 AC6 5 PHE B 26 GLY B 28 GLY B 30 ASP B 47 SITE 2 AC6 5 EM8 B 202 SITE 1 AC7 18 PHE A 113 ILE B 2 LEU B 5 PRO B 17 SITE 2 AC7 18 ILE B 18 TYR B 20 MET B 21 PHE B 26 SITE 3 AC7 18 CYS B 27 GLY B 28 LEU B 29 GLY B 30 SITE 4 AC7 18 CYS B 43 HIS B 46 ASP B 47 ILE B 94 SITE 5 AC7 18 CA B 201 HOH B 319 CRYST1 27.962 85.501 103.079 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.035763 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011696 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009701 0.00000