data_6G5Y # _entry.id 6G5Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.295 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6G5Y WWPDB D_1200009463 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6G5Y _pdbx_database_status.recvd_initial_deposition_date 2018-03-30 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Merlino, A.' 1 ? 'Ferraro, G.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Dalton Trans' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1477-9234 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 47 _citation.language ? _citation.page_first 8716 _citation.page_last 8723 _citation.title 'A case of extensive protein platination: the reaction of lysozyme with a Pt(ii)-terpyridine complex.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1039/c8dt01254g _citation.pdbx_database_id_PubMed 29904761 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Ferraro, G.' 1 primary 'Marzo, T.' 2 primary 'Infrasca, T.' 3 primary 'Cilibrizzi, A.' 4 primary 'Vilar, R.' 5 primary 'Messori, L.' 6 primary 'Merlino, A.' 7 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6G5Y _cell.details ? _cell.formula_units_Z ? _cell.length_a 78.490 _cell.length_a_esd ? _cell.length_b 78.490 _cell.length_b_esd ? _cell.length_c 36.730 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6G5Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Lysozyme C' 14331.160 1 3.2.1.17 ? ? ? 2 non-polymer syn 'NITRATE ION' 62.005 3 ? ? ? ? 3 non-polymer syn 'PLATINUM (II) ION' 195.078 8 ? ? ? ? 4 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 7 ? ? ? ? 5 water nat water 18.015 121 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '1,4-beta-N-acetylmuramidase C,Allergen Gal d IV' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _entity_poly.pdbx_seq_one_letter_code_can ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 VAL n 1 3 PHE n 1 4 GLY n 1 5 ARG n 1 6 CYS n 1 7 GLU n 1 8 LEU n 1 9 ALA n 1 10 ALA n 1 11 ALA n 1 12 MET n 1 13 LYS n 1 14 ARG n 1 15 HIS n 1 16 GLY n 1 17 LEU n 1 18 ASP n 1 19 ASN n 1 20 TYR n 1 21 ARG n 1 22 GLY n 1 23 TYR n 1 24 SER n 1 25 LEU n 1 26 GLY n 1 27 ASN n 1 28 TRP n 1 29 VAL n 1 30 CYS n 1 31 ALA n 1 32 ALA n 1 33 LYS n 1 34 PHE n 1 35 GLU n 1 36 SER n 1 37 ASN n 1 38 PHE n 1 39 ASN n 1 40 THR n 1 41 GLN n 1 42 ALA n 1 43 THR n 1 44 ASN n 1 45 ARG n 1 46 ASN n 1 47 THR n 1 48 ASP n 1 49 GLY n 1 50 SER n 1 51 THR n 1 52 ASP n 1 53 TYR n 1 54 GLY n 1 55 ILE n 1 56 LEU n 1 57 GLN n 1 58 ILE n 1 59 ASN n 1 60 SER n 1 61 ARG n 1 62 TRP n 1 63 TRP n 1 64 CYS n 1 65 ASN n 1 66 ASP n 1 67 GLY n 1 68 ARG n 1 69 THR n 1 70 PRO n 1 71 GLY n 1 72 SER n 1 73 ARG n 1 74 ASN n 1 75 LEU n 1 76 CYS n 1 77 ASN n 1 78 ILE n 1 79 PRO n 1 80 CYS n 1 81 SER n 1 82 ALA n 1 83 LEU n 1 84 LEU n 1 85 SER n 1 86 SER n 1 87 ASP n 1 88 ILE n 1 89 THR n 1 90 ALA n 1 91 SER n 1 92 VAL n 1 93 ASN n 1 94 CYS n 1 95 ALA n 1 96 LYS n 1 97 LYS n 1 98 ILE n 1 99 VAL n 1 100 SER n 1 101 ASP n 1 102 GLY n 1 103 ASN n 1 104 GLY n 1 105 MET n 1 106 ASN n 1 107 ALA n 1 108 TRP n 1 109 VAL n 1 110 ALA n 1 111 TRP n 1 112 ARG n 1 113 ASN n 1 114 ARG n 1 115 CYS n 1 116 LYS n 1 117 GLY n 1 118 THR n 1 119 ASP n 1 120 VAL n 1 121 GLN n 1 122 ALA n 1 123 TRP n 1 124 ILE n 1 125 ARG n 1 126 GLY n 1 127 CYS n 1 128 ARG n 1 129 LEU n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 129 _entity_src_nat.common_name Chicken _entity_src_nat.pdbx_organism_scientific 'Gallus gallus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9031 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LYSC_CHICK _struct_ref.pdbx_db_accession P00698 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _struct_ref.pdbx_align_begin 19 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6G5Y _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 129 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00698 _struct_ref_seq.db_align_beg 19 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 147 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 129 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NO3 non-polymer . 'NITRATE ION' ? 'N O3 -1' 62.005 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PT non-polymer . 'PLATINUM (II) ION' ? 'Pt 2' 195.078 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6G5Y _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.97 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 37.68 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.4 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 283 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20% ethylene glicol, 0.10 M sodium acetate pH 4.4, 0.60 M sodium nitrate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 2M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-10-22 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.96771 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE MASSIF-3' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.96771 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline MASSIF-3 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6G5Y _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.49 _reflns.d_resolution_low 55.51 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18842 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.7 _reflns.pdbx_Rmerge_I_obs 0.039 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 18.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.025 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.00 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.49 _reflns_shell.d_res_low 1.57 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.514 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.219 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.672 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -1.06 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] -1.06 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 2.12 _refine.B_iso_max ? _refine.B_iso_mean 26.439 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.966 _refine.correlation_coeff_Fo_to_Fc_free 0.941 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6G5Y _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.49 _refine.ls_d_res_low 55.50 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 17866 _refine.ls_number_reflns_R_free 952 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.82 _refine.ls_percent_reflns_R_free 5.1 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.19566 _refine.ls_R_factor_R_free 0.24002 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.19331 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.092 _refine.pdbx_overall_ESU_R_Free 0.097 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.502 _refine.overall_SU_ML 0.087 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1001 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 48 _refine_hist.number_atoms_solvent 121 _refine_hist.number_atoms_total 1170 _refine_hist.d_res_high 1.49 _refine_hist.d_res_low 55.50 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.018 0.019 1145 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 1016 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.078 1.952 1570 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.209 3.000 2337 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.289 5.000 144 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 32.335 22.982 57 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 14.347 15.000 181 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 16.592 15.000 13 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.128 0.200 159 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.011 0.021 1357 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 265 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 2.112 2.391 558 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.096 2.386 557 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.870 3.591 708 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 2.878 3.596 709 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.962 2.768 587 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 2.960 2.770 588 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 4.642 4.071 885 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 6.123 29.840 1411 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 6.122 29.859 1412 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.492 _refine_ls_shell.d_res_low 1.531 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 79 _refine_ls_shell.number_reflns_R_work 1314 _refine_ls_shell.percent_reflns_obs 99.79 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.369 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.369 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6G5Y _struct.title 'The X-ray structure of the adduct formed in the reaction between lysozyme and a platinum(II) terpyridine compound (acid pH)' _struct.pdbx_descriptor 'Lysozyme C (E.C.3.2.1.17)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6G5Y _struct_keywords.text 'Platinum terpyridine compounds, Protein metalation, ESI MS elucidation, X-Ray structure determination, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 4 ? N N N 4 ? O N N 4 ? P N N 4 ? Q N N 4 ? R N N 4 ? S N N 4 ? T N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 4 ? HIS A 15 ? GLY A 4 HIS A 15 1 ? 12 HELX_P HELX_P2 AA2 ASN A 19 ? TYR A 23 ? ASN A 19 TYR A 23 5 ? 5 HELX_P HELX_P3 AA3 SER A 24 ? ASN A 37 ? SER A 24 ASN A 37 1 ? 14 HELX_P HELX_P4 AA4 PRO A 79 ? SER A 85 ? PRO A 79 SER A 85 5 ? 7 HELX_P HELX_P5 AA5 ILE A 88 ? SER A 100 ? ILE A 88 SER A 100 1 ? 13 HELX_P HELX_P6 AA6 ASN A 103 ? ALA A 107 ? ASN A 103 ALA A 107 5 ? 5 HELX_P HELX_P7 AA7 TRP A 108 ? CYS A 115 ? TRP A 108 CYS A 115 1 ? 8 HELX_P HELX_P8 AA8 ASP A 119 ? ARG A 125 ? ASP A 119 ARG A 125 5 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 127 SG ? ? A CYS 6 A CYS 127 1_555 ? ? ? ? ? ? ? 1.986 ? disulf2 disulf ? ? A CYS 30 SG ? ? ? 1_555 A CYS 115 SG ? ? A CYS 30 A CYS 115 1_555 ? ? ? ? ? ? ? 2.050 ? disulf3 disulf ? ? A CYS 64 SG ? ? ? 1_555 A CYS 80 SG ? ? A CYS 64 A CYS 80 1_555 ? ? ? ? ? ? ? 2.084 ? disulf4 disulf ? ? A CYS 76 SG ? ? ? 1_555 A CYS 94 SG ? ? A CYS 76 A CYS 94 1_555 ? ? ? ? ? ? ? 1.998 ? metalc1 metalc ? ? A LYS 1 N A ? ? 1_555 L PT . PT ? ? A LYS 1 A PT 211 1_555 ? ? ? ? ? ? ? 2.453 ? metalc2 metalc ? ? A LYS 1 N B ? ? 1_555 L PT . PT ? ? A LYS 1 A PT 211 1_555 ? ? ? ? ? ? ? 2.559 ? metalc3 metalc ? ? A LYS 1 NZ B ? ? 1_555 E PT . PT B ? A LYS 1 A PT 204 1_555 ? ? ? ? ? ? ? 2.204 ? metalc4 metalc ? ? A GLU 7 OE2 ? ? ? 1_555 E PT . PT B ? A GLU 7 A PT 204 1_555 ? ? ? ? ? ? ? 2.170 ? metalc5 metalc ? ? A LYS 13 NZ ? ? ? 1_555 H PT . PT A ? A LYS 13 A PT 207 1_555 ? ? ? ? ? ? ? 1.883 ? metalc6 metalc ? ? A ARG 14 NH2 ? ? ? 1_555 F PT . PT ? ? A ARG 14 A PT 205 1_555 ? ? ? ? ? ? ? 2.242 ? metalc7 metalc ? ? A HIS 15 ND1 ? ? ? 1_555 G PT . PT ? ? A HIS 15 A PT 206 1_555 ? ? ? ? ? ? ? 2.250 ? metalc8 metalc ? ? A HIS 15 NE2 ? ? ? 1_555 F PT . PT ? ? A HIS 15 A PT 205 1_555 ? ? ? ? ? ? ? 2.260 ? metalc9 metalc ? ? A ASN 93 ND2 B ? ? 1_555 J PT . PT ? ? A ASN 93 A PT 209 1_555 ? ? ? ? ? ? ? 1.927 ? metalc10 metalc ? ? A LYS 96 NZ ? ? ? 1_555 I PT . PT ? ? A LYS 96 A PT 208 1_555 ? ? ? ? ? ? ? 2.348 ? metalc11 metalc ? ? A LYS 97 NZ ? ? ? 1_555 J PT . PT ? ? A LYS 97 A PT 209 1_555 ? ? ? ? ? ? ? 2.634 ? metalc12 metalc ? ? A LEU 129 OXT ? ? ? 1_555 H PT . PT A ? A LEU 129 A PT 207 1_555 ? ? ? ? ? ? ? 2.693 ? metalc13 metalc ? ? E PT . PT B ? ? 1_555 M DMS . S ? ? A PT 204 A DMS 212 1_555 ? ? ? ? ? ? ? 2.211 ? metalc14 metalc ? ? E PT . PT B ? ? 1_555 T HOH . O B ? A PT 204 A HOH 373 1_555 ? ? ? ? ? ? ? 2.203 ? metalc15 metalc ? ? F PT . PT ? ? ? 1_555 R DMS . S ? ? A PT 205 A DMS 217 1_555 ? ? ? ? ? ? ? 2.207 ? metalc16 metalc ? ? F PT . PT ? ? ? 1_555 T HOH . O ? ? A PT 205 A HOH 382 1_555 ? ? ? ? ? ? ? 2.209 ? metalc17 metalc ? ? G PT . PT ? ? ? 1_555 T HOH . O ? ? A PT 206 A HOH 310 1_555 ? ? ? ? ? ? ? 2.217 ? metalc18 metalc ? ? G PT . PT ? ? ? 1_555 S DMS . S ? ? A PT 206 A DMS 218 1_555 ? ? ? ? ? ? ? 2.200 ? metalc19 metalc ? ? G PT . PT ? ? ? 1_555 S DMS . O ? ? A PT 206 A DMS 218 1_555 ? ? ? ? ? ? ? 2.661 ? metalc20 metalc ? ? G PT . PT ? ? ? 1_555 Q DMS . S ? ? A PT 206 A DMS 216 1_555 ? ? ? ? ? ? ? 2.196 ? metalc21 metalc ? ? H PT . PT A ? ? 1_555 O DMS . O ? ? A PT 207 A DMS 214 1_555 ? ? ? ? ? ? ? 2.707 ? metalc22 metalc ? ? I PT . PT ? ? ? 1_555 T HOH . O ? ? A PT 208 A HOH 386 1_555 ? ? ? ? ? ? ? 2.201 ? metalc23 metalc ? ? I PT . PT ? ? ? 1_555 T HOH . O ? ? A PT 208 A HOH 381 1_555 ? ? ? ? ? ? ? 2.200 ? metalc24 metalc ? ? J PT . PT ? ? ? 1_555 T HOH . O ? ? A PT 209 A HOH 380 1_555 ? ? ? ? ? ? ? 2.636 ? metalc25 metalc ? ? J PT . PT ? ? ? 1_555 T HOH . O ? ? A PT 209 A HOH 390 1_555 ? ? ? ? ? ? ? 2.206 ? metalc26 metalc ? ? K PT . PT ? ? ? 1_555 T HOH . O ? ? A PT 210 A HOH 304 1_555 ? ? ? ? ? ? ? 2.045 ? metalc27 metalc ? ? K PT . PT ? ? ? 1_555 T HOH . O ? ? A PT 210 A HOH 402 1_555 ? ? ? ? ? ? ? 2.203 ? metalc28 metalc ? ? K PT . PT ? ? ? 1_555 T HOH . O ? ? A PT 210 A HOH 411 1_555 ? ? ? ? ? ? ? 2.515 ? metalc29 metalc ? ? L PT . PT ? ? ? 1_555 T HOH . O ? ? A PT 211 A HOH 391 1_555 ? ? ? ? ? ? ? 2.199 ? metalc30 metalc ? ? A LEU 129 O ? ? ? 1_555 H PT . PT A ? A LEU 129 A PT 207 8_554 ? ? ? ? ? ? ? 2.735 ? metalc31 metalc ? ? A LEU 129 OXT ? ? ? 1_555 H PT . PT A ? A LEU 129 A PT 207 8_554 ? ? ? ? ? ? ? 2.272 ? metalc32 metalc ? ? I PT . PT ? ? ? 1_555 T HOH . O ? ? A PT 208 A HOH 408 8_554 ? ? ? ? ? ? ? 2.500 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 43 ? ARG A 45 ? THR A 43 ARG A 45 AA1 2 THR A 51 ? TYR A 53 ? THR A 51 TYR A 53 AA1 3 ILE A 58 ? ASN A 59 ? ILE A 58 ASN A 59 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASN A 44 ? N ASN A 44 O ASP A 52 ? O ASP A 52 AA1 2 3 N TYR A 53 ? N TYR A 53 O ILE A 58 ? O ILE A 58 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NO3 201 ? 5 'binding site for residue NO3 A 201' AC2 Software A NO3 202 ? 9 'binding site for residue NO3 A 202' AC3 Software A NO3 203 ? 9 'binding site for residue NO3 A 203' AC4 Software A PT 204 ? 5 'binding site for residue PT A 204' AC5 Software A PT 205 ? 4 'binding site for residue PT A 205' AC6 Software A PT 206 ? 4 'binding site for residue PT A 206' AC7 Software A PT 207 ? 5 'binding site for residue PT A 207' AC8 Software A PT 208 ? 5 'binding site for residue PT A 208' AC9 Software A PT 209 ? 4 'binding site for residue PT A 209' AD1 Software A PT 210 ? 4 'binding site for residue PT A 210' AD2 Software A PT 211 ? 3 'binding site for residue PT A 211' AD3 Software A DMS 212 ? 3 'binding site for residue DMS A 212' AD4 Software A DMS 213 ? 5 'binding site for residue DMS A 213' AD5 Software A DMS 214 ? 6 'binding site for residue DMS A 214' AD6 Software A DMS 215 ? 5 'binding site for residue DMS A 215' AD7 Software A DMS 216 ? 6 'binding site for residue DMS A 216' AD8 Software A DMS 217 ? 6 'binding site for residue DMS A 217' AD9 Software A DMS 218 ? 7 'binding site for residue DMS A 218' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASN A 65 ? ASN A 65 . ? 1_555 ? 2 AC1 5 ASN A 74 ? ASN A 74 . ? 1_555 ? 3 AC1 5 ASN A 77 ? ASN A 77 . ? 1_555 ? 4 AC1 5 ILE A 78 ? ILE A 78 . ? 1_555 ? 5 AC1 5 PRO A 79 ? PRO A 79 . ? 1_555 ? 6 AC2 9 CYS A 64 ? CYS A 64 . ? 1_555 ? 7 AC2 9 ASN A 65 ? ASN A 65 . ? 1_555 ? 8 AC2 9 ASP A 66 ? ASP A 66 . ? 1_555 ? 9 AC2 9 GLY A 67 ? GLY A 67 . ? 1_555 ? 10 AC2 9 ARG A 68 ? ARG A 68 . ? 1_555 ? 11 AC2 9 THR A 69 ? THR A 69 . ? 1_555 ? 12 AC2 9 SER A 72 ? SER A 72 . ? 1_555 ? 13 AC2 9 HOH T . ? HOH A 301 . ? 1_555 ? 14 AC2 9 HOH T . ? HOH A 337 . ? 1_555 ? 15 AC3 9 ARG A 21 ? ARG A 21 . ? 1_555 ? 16 AC3 9 VAL A 99 ? VAL A 99 . ? 1_555 ? 17 AC3 9 SER A 100 ? SER A 100 . ? 1_555 ? 18 AC3 9 GLY A 102 ? GLY A 102 . ? 1_555 ? 19 AC3 9 ASN A 103 ? ASN A 103 . ? 1_555 ? 20 AC3 9 GLY A 104 ? GLY A 104 . ? 1_555 ? 21 AC3 9 VAL A 109 ? VAL A 109 . ? 4_545 ? 22 AC3 9 ASN A 113 ? ASN A 113 . ? 4_545 ? 23 AC3 9 HOH T . ? HOH A 349 . ? 1_555 ? 24 AC4 5 LYS A 1 ? LYS A 1 . ? 1_555 ? 25 AC4 5 GLU A 7 ? GLU A 7 . ? 1_555 ? 26 AC4 5 DMS M . ? DMS A 212 . ? 1_555 ? 27 AC4 5 HOH T . ? HOH A 316 . ? 1_555 ? 28 AC4 5 HOH T . ? HOH A 373 . ? 1_555 ? 29 AC5 4 ARG A 14 ? ARG A 14 . ? 1_555 ? 30 AC5 4 HIS A 15 ? HIS A 15 . ? 1_555 ? 31 AC5 4 DMS R . ? DMS A 217 . ? 1_555 ? 32 AC5 4 HOH T . ? HOH A 382 . ? 1_555 ? 33 AC6 4 HIS A 15 ? HIS A 15 . ? 1_555 ? 34 AC6 4 DMS Q . ? DMS A 216 . ? 1_555 ? 35 AC6 4 DMS S . ? DMS A 218 . ? 1_555 ? 36 AC6 4 HOH T . ? HOH A 310 . ? 1_555 ? 37 AC7 5 LYS A 13 ? LYS A 13 . ? 1_555 ? 38 AC7 5 LEU A 129 ? LEU A 129 . ? 1_555 ? 39 AC7 5 LEU A 129 ? LEU A 129 . ? 8_554 ? 40 AC7 5 DMS O . ? DMS A 214 . ? 8_554 ? 41 AC7 5 DMS O . ? DMS A 214 . ? 1_555 ? 42 AC8 5 LYS A 96 ? LYS A 96 . ? 1_555 ? 43 AC8 5 DMS S . ? DMS A 218 . ? 1_555 ? 44 AC8 5 HOH T . ? HOH A 381 . ? 1_555 ? 45 AC8 5 HOH T . ? HOH A 386 . ? 1_555 ? 46 AC8 5 HOH T . ? HOH A 408 . ? 8_554 ? 47 AC9 4 ASN A 93 ? ASN A 93 . ? 1_555 ? 48 AC9 4 LYS A 97 ? LYS A 97 . ? 1_555 ? 49 AC9 4 HOH T . ? HOH A 380 . ? 1_555 ? 50 AC9 4 HOH T . ? HOH A 390 . ? 1_555 ? 51 AD1 4 ASP A 101 ? ASP A 101 . ? 1_555 ? 52 AD1 4 HOH T . ? HOH A 304 . ? 1_555 ? 53 AD1 4 HOH T . ? HOH A 402 . ? 1_555 ? 54 AD1 4 HOH T . ? HOH A 411 . ? 1_555 ? 55 AD2 3 LYS A 1 ? LYS A 1 . ? 1_555 ? 56 AD2 3 HOH T . ? HOH A 322 . ? 1_555 ? 57 AD2 3 HOH T . ? HOH A 391 . ? 1_555 ? 58 AD3 3 LYS A 1 ? LYS A 1 . ? 1_555 ? 59 AD3 3 PT E . ? PT A 204 . ? 1_555 ? 60 AD3 3 HOH T . ? HOH A 373 . ? 1_555 ? 61 AD4 5 ALA A 10 ? ALA A 10 . ? 1_555 ? 62 AD4 5 ALA A 11 ? ALA A 11 . ? 1_555 ? 63 AD4 5 ARG A 14 ? ARG A 14 . ? 8_554 ? 64 AD4 5 ARG A 14 ? ARG A 14 . ? 1_555 ? 65 AD4 5 DMS R . ? DMS A 217 . ? 8_554 ? 66 AD5 6 LYS A 13 ? LYS A 13 . ? 1_555 ? 67 AD5 6 ASP A 18 ? ASP A 18 . ? 1_555 ? 68 AD5 6 PRO A 70 ? PRO A 70 . ? 6_545 ? 69 AD5 6 LEU A 129 ? LEU A 129 . ? 1_555 ? 70 AD5 6 PT H . ? PT A 207 . ? 8_554 ? 71 AD5 6 PT H . ? PT A 207 . ? 1_555 ? 72 AD6 5 SER A 24 ? SER A 24 . ? 1_555 ? 73 AD6 5 LEU A 25 ? LEU A 25 . ? 1_555 ? 74 AD6 5 GLY A 26 ? GLY A 26 . ? 1_555 ? 75 AD6 5 GLN A 121 ? GLN A 121 . ? 1_555 ? 76 AD6 5 ILE A 124 ? ILE A 124 . ? 1_555 ? 77 AD7 6 ARG A 14 ? ARG A 14 . ? 1_555 ? 78 AD7 6 HIS A 15 ? HIS A 15 . ? 1_555 ? 79 AD7 6 ARG A 128 ? ARG A 128 . ? 8_554 ? 80 AD7 6 PT G . ? PT A 206 . ? 1_555 ? 81 AD7 6 DMS S . ? DMS A 218 . ? 1_555 ? 82 AD7 6 HOH T . ? HOH A 331 . ? 1_555 ? 83 AD8 6 LYS A 1 ? LYS A 1 . ? 8_554 ? 84 AD8 6 GLU A 7 ? GLU A 7 . ? 8_554 ? 85 AD8 6 ARG A 14 ? ARG A 14 . ? 1_555 ? 86 AD8 6 PT F . ? PT A 205 . ? 1_555 ? 87 AD8 6 DMS N . ? DMS A 213 . ? 8_554 ? 88 AD8 6 HOH T . ? HOH A 338 . ? 1_555 ? 89 AD9 7 ASN A 93 ? ASN A 93 . ? 1_555 ? 90 AD9 7 LYS A 96 ? LYS A 96 . ? 1_555 ? 91 AD9 7 ARG A 128 ? ARG A 128 . ? 8_554 ? 92 AD9 7 PT G . ? PT A 206 . ? 1_555 ? 93 AD9 7 PT I . ? PT A 208 . ? 1_555 ? 94 AD9 7 DMS Q . ? DMS A 216 . ? 1_555 ? 95 AD9 7 HOH T . ? HOH A 310 . ? 1_555 ? # _atom_sites.entry_id 6G5Y _atom_sites.fract_transf_matrix[1][1] 0.012740 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012740 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027226 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O PT S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 MET 12 12 12 MET MET A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 HIS 15 15 15 HIS HIS A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 TRP 28 28 28 TRP TRP A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 CYS 30 30 30 CYS CYS A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 TRP 62 62 62 TRP TRP A . n A 1 63 TRP 63 63 63 TRP TRP A . n A 1 64 CYS 64 64 64 CYS CYS A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 CYS 76 76 76 CYS CYS A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 CYS 80 80 80 CYS CYS A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 CYS 94 94 94 CYS CYS A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 MET 105 105 105 MET MET A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 TRP 108 108 108 TRP TRP A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 TRP 111 111 111 TRP TRP A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 ARG 114 114 114 ARG ARG A . n A 1 115 CYS 115 115 115 CYS CYS A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 TRP 123 123 123 TRP TRP A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 CYS 127 127 127 CYS CYS A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 LEU 129 129 129 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 1 201 408 NO3 NO3 A . C 2 NO3 1 202 406 NO3 NO3 A . D 2 NO3 1 203 407 NO3 NO3 A . E 3 PT 1 204 1 PT PT A . F 3 PT 1 205 2 PT PT A . G 3 PT 1 206 3 PT PT A . H 3 PT 1 207 4 PT PT A . I 3 PT 1 208 5 PT PT A . J 3 PT 1 209 6 PT PT A . K 3 PT 1 210 7 PT PT A . L 3 PT 1 211 8 PT PT A . M 4 DMS 1 212 1 DMS DMS A . N 4 DMS 1 213 2 DMS DMS A . O 4 DMS 1 214 3 DMS DMS A . P 4 DMS 1 215 4 DMS DMS A . Q 4 DMS 1 216 5 DMS DMS A . R 4 DMS 1 217 6 DMS DMS A . S 4 DMS 1 218 8 DMS DMS A . T 5 HOH 1 301 13 HOH HOH A . T 5 HOH 2 302 80 HOH HOH A . T 5 HOH 3 303 32 HOH HOH A . T 5 HOH 4 304 22 HOH HOH A . T 5 HOH 5 305 93 HOH HOH A . T 5 HOH 6 306 20 HOH HOH A . T 5 HOH 7 307 42 HOH HOH A . T 5 HOH 8 308 103 HOH HOH A . T 5 HOH 9 309 54 HOH HOH A . T 5 HOH 10 310 113 HOH HOH A . T 5 HOH 11 311 21 HOH HOH A . T 5 HOH 12 312 88 HOH HOH A . T 5 HOH 13 313 123 HOH HOH A . T 5 HOH 14 314 108 HOH HOH A . T 5 HOH 15 315 105 HOH HOH A . T 5 HOH 16 316 114 HOH HOH A . T 5 HOH 17 317 125 HOH HOH A . T 5 HOH 18 318 85 HOH HOH A . T 5 HOH 19 319 48 HOH HOH A . T 5 HOH 20 320 84 HOH HOH A . T 5 HOH 21 321 77 HOH HOH A . T 5 HOH 22 322 26 HOH HOH A . T 5 HOH 23 323 14 HOH HOH A . T 5 HOH 24 324 91 HOH HOH A . T 5 HOH 25 325 18 HOH HOH A . T 5 HOH 26 326 31 HOH HOH A . T 5 HOH 27 327 56 HOH HOH A . T 5 HOH 28 328 66 HOH HOH A . T 5 HOH 29 329 94 HOH HOH A . T 5 HOH 30 330 38 HOH HOH A . T 5 HOH 31 331 27 HOH HOH A . T 5 HOH 32 332 11 HOH HOH A . T 5 HOH 33 333 106 HOH HOH A . T 5 HOH 34 334 100 HOH HOH A . T 5 HOH 35 335 44 HOH HOH A . T 5 HOH 36 336 118 HOH HOH A . T 5 HOH 37 337 19 HOH HOH A . T 5 HOH 38 338 102 HOH HOH A . T 5 HOH 39 339 87 HOH HOH A . T 5 HOH 40 340 28 HOH HOH A . T 5 HOH 41 341 107 HOH HOH A . T 5 HOH 42 342 70 HOH HOH A . T 5 HOH 43 343 40 HOH HOH A . T 5 HOH 44 344 30 HOH HOH A . T 5 HOH 45 345 101 HOH HOH A . T 5 HOH 46 346 9 HOH HOH A . T 5 HOH 47 347 96 HOH HOH A . T 5 HOH 48 348 45 HOH HOH A . T 5 HOH 49 349 62 HOH HOH A . T 5 HOH 50 350 25 HOH HOH A . T 5 HOH 51 351 71 HOH HOH A . T 5 HOH 52 352 36 HOH HOH A . T 5 HOH 53 353 86 HOH HOH A . T 5 HOH 54 354 46 HOH HOH A . T 5 HOH 55 355 122 HOH HOH A . T 5 HOH 56 356 83 HOH HOH A . T 5 HOH 57 357 92 HOH HOH A . T 5 HOH 58 358 16 HOH HOH A . T 5 HOH 59 359 104 HOH HOH A . T 5 HOH 60 360 75 HOH HOH A . T 5 HOH 61 361 58 HOH HOH A . T 5 HOH 62 362 133 HOH HOH A . T 5 HOH 63 363 24 HOH HOH A . T 5 HOH 64 364 81 HOH HOH A . T 5 HOH 65 365 65 HOH HOH A . T 5 HOH 66 366 50 HOH HOH A . T 5 HOH 67 367 89 HOH HOH A . T 5 HOH 68 368 79 HOH HOH A . T 5 HOH 69 369 34 HOH HOH A . T 5 HOH 70 370 59 HOH HOH A . T 5 HOH 71 371 12 HOH HOH A . T 5 HOH 72 372 47 HOH HOH A . T 5 HOH 73 373 2 HOH HOH A . T 5 HOH 74 374 120 HOH HOH A . T 5 HOH 75 375 90 HOH HOH A . T 5 HOH 76 376 55 HOH HOH A . T 5 HOH 77 377 124 HOH HOH A . T 5 HOH 78 378 49 HOH HOH A . T 5 HOH 79 379 10 HOH HOH A . T 5 HOH 80 380 17 HOH HOH A . T 5 HOH 81 381 67 HOH HOH A . T 5 HOH 82 382 112 HOH HOH A . T 5 HOH 83 383 76 HOH HOH A . T 5 HOH 84 384 43 HOH HOH A . T 5 HOH 85 385 33 HOH HOH A . T 5 HOH 86 386 41 HOH HOH A . T 5 HOH 87 387 95 HOH HOH A . T 5 HOH 88 388 117 HOH HOH A . T 5 HOH 89 389 115 HOH HOH A . T 5 HOH 90 390 135 HOH HOH A . T 5 HOH 91 391 72 HOH HOH A . T 5 HOH 92 392 37 HOH HOH A . T 5 HOH 93 393 111 HOH HOH A . T 5 HOH 94 394 134 HOH HOH A . T 5 HOH 95 395 73 HOH HOH A . T 5 HOH 96 396 131 HOH HOH A . T 5 HOH 97 397 57 HOH HOH A . T 5 HOH 98 398 60 HOH HOH A . T 5 HOH 99 399 126 HOH HOH A . T 5 HOH 100 400 116 HOH HOH A . T 5 HOH 101 401 35 HOH HOH A . T 5 HOH 102 402 52 HOH HOH A . T 5 HOH 103 403 119 HOH HOH A . T 5 HOH 104 404 132 HOH HOH A . T 5 HOH 105 405 53 HOH HOH A . T 5 HOH 106 406 121 HOH HOH A . T 5 HOH 107 407 29 HOH HOH A . T 5 HOH 108 408 68 HOH HOH A . T 5 HOH 109 409 98 HOH HOH A . T 5 HOH 110 410 130 HOH HOH A . T 5 HOH 111 411 136 HOH HOH A . T 5 HOH 112 412 99 HOH HOH A . T 5 HOH 113 413 61 HOH HOH A . T 5 HOH 114 414 109 HOH HOH A . T 5 HOH 115 415 110 HOH HOH A . T 5 HOH 116 416 129 HOH HOH A . T 5 HOH 117 417 64 HOH HOH A . T 5 HOH 118 418 78 HOH HOH A . T 5 HOH 119 419 63 HOH HOH A . T 5 HOH 120 420 23 HOH HOH A . T 5 HOH 121 421 128 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2620 ? 1 MORE -116 ? 1 'SSA (A^2)' 6870 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 326 ? T HOH . 2 1 A HOH 366 ? T HOH . 3 1 A HOH 418 ? T HOH . 4 1 A HOH 420 ? T HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N A A LYS 1 ? A LYS 1 ? 1_555 PT ? L PT . ? A PT 211 ? 1_555 N B A LYS 1 ? A LYS 1 ? 1_555 8.4 ? 2 N A A LYS 1 ? A LYS 1 ? 1_555 PT ? L PT . ? A PT 211 ? 1_555 O ? T HOH . ? A HOH 391 ? 1_555 100.7 ? 3 N B A LYS 1 ? A LYS 1 ? 1_555 PT ? L PT . ? A PT 211 ? 1_555 O ? T HOH . ? A HOH 391 ? 1_555 94.4 ? 4 NZ B A LYS 1 ? A LYS 1 ? 1_555 PT B E PT . ? A PT 204 ? 1_555 OE2 ? A GLU 7 ? A GLU 7 ? 1_555 91.5 ? 5 NZ B A LYS 1 ? A LYS 1 ? 1_555 PT B E PT . ? A PT 204 ? 1_555 S ? M DMS . ? A DMS 212 ? 1_555 87.5 ? 6 OE2 ? A GLU 7 ? A GLU 7 ? 1_555 PT B E PT . ? A PT 204 ? 1_555 S ? M DMS . ? A DMS 212 ? 1_555 178.8 ? 7 NZ B A LYS 1 ? A LYS 1 ? 1_555 PT B E PT . ? A PT 204 ? 1_555 O B T HOH . ? A HOH 373 ? 1_555 179.5 ? 8 OE2 ? A GLU 7 ? A GLU 7 ? 1_555 PT B E PT . ? A PT 204 ? 1_555 O B T HOH . ? A HOH 373 ? 1_555 88.0 ? 9 S ? M DMS . ? A DMS 212 ? 1_555 PT B E PT . ? A PT 204 ? 1_555 O B T HOH . ? A HOH 373 ? 1_555 93.0 ? 10 NZ ? A LYS 13 ? A LYS 13 ? 1_555 PT A H PT . ? A PT 207 ? 1_555 OXT ? A LEU 129 ? A LEU 129 ? 1_555 94.2 ? 11 NZ ? A LYS 13 ? A LYS 13 ? 1_555 PT A H PT . ? A PT 207 ? 1_555 O ? O DMS . ? A DMS 214 ? 1_555 86.4 ? 12 OXT ? A LEU 129 ? A LEU 129 ? 1_555 PT A H PT . ? A PT 207 ? 1_555 O ? O DMS . ? A DMS 214 ? 1_555 106.8 ? 13 NZ ? A LYS 13 ? A LYS 13 ? 1_555 PT A H PT . ? A PT 207 ? 1_555 O ? A LEU 129 ? A LEU 129 ? 1_555 118.5 ? 14 OXT ? A LEU 129 ? A LEU 129 ? 1_555 PT A H PT . ? A PT 207 ? 1_555 O ? A LEU 129 ? A LEU 129 ? 1_555 25.0 ? 15 O ? O DMS . ? A DMS 214 ? 1_555 PT A H PT . ? A PT 207 ? 1_555 O ? A LEU 129 ? A LEU 129 ? 1_555 100.8 ? 16 NZ ? A LYS 13 ? A LYS 13 ? 1_555 PT A H PT . ? A PT 207 ? 1_555 OXT ? A LEU 129 ? A LEU 129 ? 1_555 94.2 ? 17 OXT ? A LEU 129 ? A LEU 129 ? 1_555 PT A H PT . ? A PT 207 ? 1_555 OXT ? A LEU 129 ? A LEU 129 ? 1_555 0.0 ? 18 O ? O DMS . ? A DMS 214 ? 1_555 PT A H PT . ? A PT 207 ? 1_555 OXT ? A LEU 129 ? A LEU 129 ? 1_555 106.8 ? 19 O ? A LEU 129 ? A LEU 129 ? 1_555 PT A H PT . ? A PT 207 ? 1_555 OXT ? A LEU 129 ? A LEU 129 ? 1_555 25.0 ? 20 NH2 ? A ARG 14 ? A ARG 14 ? 1_555 PT ? F PT . ? A PT 205 ? 1_555 NE2 ? A HIS 15 ? A HIS 15 ? 1_555 90.3 ? 21 NH2 ? A ARG 14 ? A ARG 14 ? 1_555 PT ? F PT . ? A PT 205 ? 1_555 S ? R DMS . ? A DMS 217 ? 1_555 88.2 ? 22 NE2 ? A HIS 15 ? A HIS 15 ? 1_555 PT ? F PT . ? A PT 205 ? 1_555 S ? R DMS . ? A DMS 217 ? 1_555 178.1 ? 23 NH2 ? A ARG 14 ? A ARG 14 ? 1_555 PT ? F PT . ? A PT 205 ? 1_555 O ? T HOH . ? A HOH 382 ? 1_555 178.4 ? 24 NE2 ? A HIS 15 ? A HIS 15 ? 1_555 PT ? F PT . ? A PT 205 ? 1_555 O ? T HOH . ? A HOH 382 ? 1_555 88.6 ? 25 S ? R DMS . ? A DMS 217 ? 1_555 PT ? F PT . ? A PT 205 ? 1_555 O ? T HOH . ? A HOH 382 ? 1_555 92.9 ? 26 ND1 ? A HIS 15 ? A HIS 15 ? 1_555 PT ? G PT . ? A PT 206 ? 1_555 O ? T HOH . ? A HOH 310 ? 1_555 91.6 ? 27 ND1 ? A HIS 15 ? A HIS 15 ? 1_555 PT ? G PT . ? A PT 206 ? 1_555 S ? S DMS . ? A DMS 218 ? 1_555 178.7 ? 28 O ? T HOH . ? A HOH 310 ? 1_555 PT ? G PT . ? A PT 206 ? 1_555 S ? S DMS . ? A DMS 218 ? 1_555 87.3 ? 29 ND1 ? A HIS 15 ? A HIS 15 ? 1_555 PT ? G PT . ? A PT 206 ? 1_555 O ? S DMS . ? A DMS 218 ? 1_555 144.9 ? 30 O ? T HOH . ? A HOH 310 ? 1_555 PT ? G PT . ? A PT 206 ? 1_555 O ? S DMS . ? A DMS 218 ? 1_555 60.7 ? 31 S ? S DMS . ? A DMS 218 ? 1_555 PT ? G PT . ? A PT 206 ? 1_555 O ? S DMS . ? A DMS 218 ? 1_555 33.8 ? 32 ND1 ? A HIS 15 ? A HIS 15 ? 1_555 PT ? G PT . ? A PT 206 ? 1_555 S ? Q DMS . ? A DMS 216 ? 1_555 90.2 ? 33 O ? T HOH . ? A HOH 310 ? 1_555 PT ? G PT . ? A PT 206 ? 1_555 S ? Q DMS . ? A DMS 216 ? 1_555 174.8 ? 34 S ? S DMS . ? A DMS 218 ? 1_555 PT ? G PT . ? A PT 206 ? 1_555 S ? Q DMS . ? A DMS 216 ? 1_555 90.8 ? 35 O ? S DMS . ? A DMS 218 ? 1_555 PT ? G PT . ? A PT 206 ? 1_555 S ? Q DMS . ? A DMS 216 ? 1_555 115.7 ? 36 ND2 B A ASN 93 ? A ASN 93 ? 1_555 PT ? J PT . ? A PT 209 ? 1_555 NZ ? A LYS 97 ? A LYS 97 ? 1_555 98.0 ? 37 ND2 B A ASN 93 ? A ASN 93 ? 1_555 PT ? J PT . ? A PT 209 ? 1_555 O ? T HOH . ? A HOH 380 ? 1_555 84.4 ? 38 NZ ? A LYS 97 ? A LYS 97 ? 1_555 PT ? J PT . ? A PT 209 ? 1_555 O ? T HOH . ? A HOH 380 ? 1_555 174.7 ? 39 ND2 B A ASN 93 ? A ASN 93 ? 1_555 PT ? J PT . ? A PT 209 ? 1_555 O ? T HOH . ? A HOH 390 ? 1_555 176.1 ? 40 NZ ? A LYS 97 ? A LYS 97 ? 1_555 PT ? J PT . ? A PT 209 ? 1_555 O ? T HOH . ? A HOH 390 ? 1_555 82.9 ? 41 O ? T HOH . ? A HOH 380 ? 1_555 PT ? J PT . ? A PT 209 ? 1_555 O ? T HOH . ? A HOH 390 ? 1_555 94.5 ? 42 NZ ? A LYS 96 ? A LYS 96 ? 1_555 PT ? I PT . ? A PT 208 ? 1_555 O ? T HOH . ? A HOH 386 ? 1_555 87.7 ? 43 NZ ? A LYS 96 ? A LYS 96 ? 1_555 PT ? I PT . ? A PT 208 ? 1_555 O ? T HOH . ? A HOH 381 ? 1_555 86.2 ? 44 O ? T HOH . ? A HOH 386 ? 1_555 PT ? I PT . ? A PT 208 ? 1_555 O ? T HOH . ? A HOH 381 ? 1_555 173.1 ? 45 NZ ? A LYS 96 ? A LYS 96 ? 1_555 PT ? I PT . ? A PT 208 ? 1_555 O ? T HOH . ? A HOH 408 ? 8_554 179.5 ? 46 O ? T HOH . ? A HOH 386 ? 1_555 PT ? I PT . ? A PT 208 ? 1_555 O ? T HOH . ? A HOH 408 ? 8_554 92.4 ? 47 O ? T HOH . ? A HOH 381 ? 1_555 PT ? I PT . ? A PT 208 ? 1_555 O ? T HOH . ? A HOH 408 ? 8_554 93.7 ? 48 O ? T HOH . ? A HOH 304 ? 1_555 PT ? K PT . ? A PT 210 ? 1_555 O ? T HOH . ? A HOH 402 ? 1_555 151.6 ? 49 O ? T HOH . ? A HOH 304 ? 1_555 PT ? K PT . ? A PT 210 ? 1_555 O ? T HOH . ? A HOH 411 ? 1_555 98.7 ? 50 O ? T HOH . ? A HOH 402 ? 1_555 PT ? K PT . ? A PT 210 ? 1_555 O ? T HOH . ? A HOH 411 ? 1_555 93.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-06-27 2 'Structure model' 1 1 2018-07-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 87 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 87 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 87 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 124.43 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 6.13 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 21 ? B 34.45 42.68 2 1 ARG A 68 ? ? -141.61 26.51 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 421 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.52 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NITRATE ION' NO3 3 'PLATINUM (II) ION' PT 4 'DIMETHYL SULFOXIDE' DMS 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #