data_6G6D # _entry.id 6G6D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.299 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6G6D WWPDB D_1200009466 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6G6D _pdbx_database_status.recvd_initial_deposition_date 2018-04-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Rhys, G.G.' 1 0000-0002-0247-9495 'Brady, R.L.' 2 ? 'Woolfson, D.N.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 9 _citation.language ? _citation.page_first 4132 _citation.page_last 4132 _citation.title 'Maintaining and breaking symmetry in homomeric coiled-coil assemblies.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-018-06391-y _citation.pdbx_database_id_PubMed 30297707 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rhys, G.G.' 1 0000-0002-0247-9495 primary 'Wood, C.W.' 2 0000-0003-1243-3105 primary 'Lang, E.J.M.' 3 0000-0002-3808-054X primary 'Mulholland, A.J.' 4 ? primary 'Brady, R.L.' 5 0000-0002-3575-5513 primary 'Thomson, A.R.' 6 0000-0002-1066-1369 primary 'Woolfson, D.N.' 7 0000-0002-0394-3202 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6G6D _cell.details ? _cell.formula_units_Z ? _cell.length_a 104.160 _cell.length_a_esd ? _cell.length_b 104.160 _cell.length_b_esd ? _cell.length_c 104.160 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 72 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6G6D _symmetry.cell_setting ? _symmetry.Int_Tables_number 213 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 3 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn CC-Type2-LL-Sg 3298.871 3 ? ? ? ? 2 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 3 water nat water 18.015 17 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)GELAQSLKELAKSLKELAWSLKELAQSLKG(NH2)' _entity_poly.pdbx_seq_one_letter_code_can XGELAQSLKELAKSLKELAWSLKELAQSLKGX _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 GLY n 1 3 GLU n 1 4 LEU n 1 5 ALA n 1 6 GLN n 1 7 SER n 1 8 LEU n 1 9 LYS n 1 10 GLU n 1 11 LEU n 1 12 ALA n 1 13 LYS n 1 14 SER n 1 15 LEU n 1 16 LYS n 1 17 GLU n 1 18 LEU n 1 19 ALA n 1 20 TRP n 1 21 SER n 1 22 LEU n 1 23 LYS n 1 24 GLU n 1 25 LEU n 1 26 ALA n 1 27 GLN n 1 28 SER n 1 29 LEU n 1 30 LYS n 1 31 GLY n 1 32 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 32 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details 'solid-phase peptide synthesis using the fmoc-based strategy' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6G6D _struct_ref.pdbx_db_accession 6G6D _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6G6D A 1 ? 32 ? 6G6D 0 ? 31 ? 0 31 2 1 6G6D B 1 ? 32 ? 6G6D 0 ? 31 ? 0 31 3 1 6G6D C 1 ? 32 ? 6G6D 0 ? 31 ? 0 31 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6G6D _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity 0.260 _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM Potassium formate and 10 % w/v PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 80 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-01-16 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97949 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I02' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97949 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I02 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6G6D _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.050 _reflns.d_resolution_low 73.650 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12704 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.000 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 70.000 _reflns.pdbx_Rmerge_I_obs 0.152 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 25.200 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects 1550 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.154 _reflns.pdbx_Rpim_I_all 0.019 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 889357 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.050 2.110 ? ? ? ? ? ? 957 100.000 ? ? ? ? 8.799 ? ? ? ? ? ? ? ? 69.800 ? ? ? ? 8.863 1.056 ? 1 1 0.432 ? 8.940 73.650 ? ? ? ? ? ? 208 99.800 ? ? ? ? 0.090 ? ? ? ? ? ? ? ? 53.900 ? ? ? ? 0.091 0.012 ? 2 1 0.997 ? # _refine.aniso_B[1][1] 0.0000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 0.0000 _refine.B_iso_max 133.830 _refine.B_iso_mean 62.8530 _refine.B_iso_min 37.340 _refine.correlation_coeff_Fo_to_Fc 0.9650 _refine.correlation_coeff_Fo_to_Fc_free 0.9590 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6G6D _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.0500 _refine.ls_d_res_low 73.6500 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12054 _refine.ls_number_reflns_R_free 601 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9800 _refine.ls_percent_reflns_R_free 4.7000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2007 _refine.ls_R_factor_R_free 0.2241 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1996 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1190 _refine.pdbx_overall_ESU_R_Free 0.1160 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 8.1410 _refine.overall_SU_ML 0.1000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.0500 _refine_hist.d_res_low 73.6500 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 17 _refine_hist.number_atoms_total 716 _refine_hist.pdbx_number_residues_total 92 _refine_hist.pdbx_B_iso_mean_ligand 116.48 _refine_hist.pdbx_B_iso_mean_solvent 66.61 _refine_hist.pdbx_number_atoms_protein 693 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.039 0.020 736 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.006 0.020 754 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 3.309 2.040 996 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.372 2.998 1772 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.900 5.000 105 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 40.303 26.667 24 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 18.681 15.000 161 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 0.192 0.200 120 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.017 0.020 803 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 117 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.0510 _refine_ls_shell.d_res_low 2.1040 _refine_ls_shell.number_reflns_all 901 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 39 _refine_ls_shell.number_reflns_R_work 862 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3630 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.3750 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6G6D _struct.title 'Crystal structure of a parallel six-helix coiled coil CC-Type2-LL-Sg' _struct.pdbx_descriptor CC-Type2-LL-Sg _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6G6D _struct_keywords.text 'de novo, coiled coil, alpha-helical bundle, synthetic construct, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 2 ? GLY A 31 ? GLY A 1 GLY A 30 1 ? 30 HELX_P HELX_P2 AA2 GLY B 2 ? GLY B 31 ? GLY B 1 GLY B 30 1 ? 30 HELX_P HELX_P3 AA3 GLU C 3 ? LYS C 30 ? GLU C 2 LYS C 29 1 ? 28 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A ACE 1 C ? ? ? 1_555 A GLY 2 N ? ? A ACE 0 A GLY 1 1_555 ? ? ? ? ? ? ? 1.361 ? covale2 covale both ? B ACE 1 C ? ? ? 1_555 B GLY 2 N ? ? B ACE 0 B GLY 1 1_555 ? ? ? ? ? ? ? 1.369 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B GOL 101 ? 1 'binding site for residue GOL B 101' AC2 Software B ACE 0 ? 4 'binding site for Di-peptide ACE B 0 and GLY B 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 HOH F . ? HOH B 201 . ? 1_555 ? 2 AC2 4 GLU B 3 ? GLU B 2 . ? 1_555 ? 3 AC2 4 LEU B 4 ? LEU B 3 . ? 1_555 ? 4 AC2 4 ALA B 5 ? ALA B 4 . ? 1_555 ? 5 AC2 4 GLN B 6 ? GLN B 5 . ? 1_555 ? # _atom_sites.entry_id 6G6D _atom_sites.fract_transf_matrix[1][1] 0.009601 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009601 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009601 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 0 0 ACE ACE A . n A 1 2 GLY 2 1 1 GLY GLY A . n A 1 3 GLU 3 2 2 GLU GLU A . n A 1 4 LEU 4 3 3 LEU LEU A . n A 1 5 ALA 5 4 4 ALA ALA A . n A 1 6 GLN 6 5 5 GLN GLN A . n A 1 7 SER 7 6 6 SER SER A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 LYS 9 8 8 LYS LYS A . n A 1 10 GLU 10 9 9 GLU GLU A . n A 1 11 LEU 11 10 10 LEU LEU A . n A 1 12 ALA 12 11 11 ALA ALA A . n A 1 13 LYS 13 12 12 LYS LYS A . n A 1 14 SER 14 13 13 SER SER A . n A 1 15 LEU 15 14 14 LEU LEU A . n A 1 16 LYS 16 15 15 LYS LYS A . n A 1 17 GLU 17 16 16 GLU GLU A . n A 1 18 LEU 18 17 17 LEU LEU A . n A 1 19 ALA 19 18 18 ALA ALA A . n A 1 20 TRP 20 19 19 TRP TRP A . n A 1 21 SER 21 20 20 SER SER A . n A 1 22 LEU 22 21 21 LEU LEU A . n A 1 23 LYS 23 22 22 LYS LYS A . n A 1 24 GLU 24 23 23 GLU GLU A . n A 1 25 LEU 25 24 24 LEU LEU A . n A 1 26 ALA 26 25 25 ALA ALA A . n A 1 27 GLN 27 26 26 GLN GLN A . n A 1 28 SER 28 27 27 SER SER A . n A 1 29 LEU 29 28 28 LEU LEU A . n A 1 30 LYS 30 29 29 LYS LYS A . n A 1 31 GLY 31 30 30 GLY GLY A . n A 1 32 NH2 32 31 ? ? ? A . n B 1 1 ACE 1 0 0 ACE ACE B . n B 1 2 GLY 2 1 1 GLY GLY B . n B 1 3 GLU 3 2 2 GLU GLU B . n B 1 4 LEU 4 3 3 LEU LEU B . n B 1 5 ALA 5 4 4 ALA ALA B . n B 1 6 GLN 6 5 5 GLN GLN B . n B 1 7 SER 7 6 6 SER SER B . n B 1 8 LEU 8 7 7 LEU LEU B . n B 1 9 LYS 9 8 8 LYS LYS B . n B 1 10 GLU 10 9 9 GLU GLU B . n B 1 11 LEU 11 10 10 LEU LEU B . n B 1 12 ALA 12 11 11 ALA ALA B . n B 1 13 LYS 13 12 12 LYS LYS B . n B 1 14 SER 14 13 13 SER SER B . n B 1 15 LEU 15 14 14 LEU LEU B . n B 1 16 LYS 16 15 15 LYS LYS B . n B 1 17 GLU 17 16 16 GLU GLU B . n B 1 18 LEU 18 17 17 LEU LEU B . n B 1 19 ALA 19 18 18 ALA ALA B . n B 1 20 TRP 20 19 19 TRP TRP B . n B 1 21 SER 21 20 20 SER SER B . n B 1 22 LEU 22 21 21 LEU LEU B . n B 1 23 LYS 23 22 22 LYS LYS B . n B 1 24 GLU 24 23 23 GLU GLU B . n B 1 25 LEU 25 24 24 LEU LEU B . n B 1 26 ALA 26 25 25 ALA ALA B . n B 1 27 GLN 27 26 26 GLN GLN B . n B 1 28 SER 28 27 27 SER SER B . n B 1 29 LEU 29 28 28 LEU LEU B . n B 1 30 LYS 30 29 29 LYS LYS B . n B 1 31 GLY 31 30 30 GLY GLY B . n B 1 32 NH2 32 31 ? ? ? B . n C 1 1 ACE 1 0 ? ? ? C . n C 1 2 GLY 2 1 1 GLY GLY C . n C 1 3 GLU 3 2 2 GLU GLU C . n C 1 4 LEU 4 3 3 LEU LEU C . n C 1 5 ALA 5 4 4 ALA ALA C . n C 1 6 GLN 6 5 5 GLN GLN C . n C 1 7 SER 7 6 6 SER SER C . n C 1 8 LEU 8 7 7 LEU LEU C . n C 1 9 LYS 9 8 8 LYS LYS C . n C 1 10 GLU 10 9 9 GLU GLU C . n C 1 11 LEU 11 10 10 LEU LEU C . n C 1 12 ALA 12 11 11 ALA ALA C . n C 1 13 LYS 13 12 12 LYS LYS C . n C 1 14 SER 14 13 13 SER SER C . n C 1 15 LEU 15 14 14 LEU LEU C . n C 1 16 LYS 16 15 15 LYS LYS C . n C 1 17 GLU 17 16 16 GLU GLU C . n C 1 18 LEU 18 17 17 LEU LEU C . n C 1 19 ALA 19 18 18 ALA ALA C . n C 1 20 TRP 20 19 19 TRP TRP C . n C 1 21 SER 21 20 20 SER SER C . n C 1 22 LEU 22 21 21 LEU LEU C . n C 1 23 LYS 23 22 22 LYS LYS C . n C 1 24 GLU 24 23 23 GLU GLU C . n C 1 25 LEU 25 24 24 LEU LEU C . n C 1 26 ALA 26 25 25 ALA ALA C . n C 1 27 GLN 27 26 26 GLN GLN C . n C 1 28 SER 28 27 27 SER SER C . n C 1 29 LEU 29 28 28 LEU LEU C . n C 1 30 LYS 30 29 29 LYS LYS C . n C 1 31 GLY 31 30 30 GLY GLY C . n C 1 32 NH2 32 31 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 GOL 1 101 1 GOL GOL B . E 3 HOH 1 101 10 HOH HOH A . E 3 HOH 2 102 3 HOH HOH A . E 3 HOH 3 103 17 HOH HOH A . E 3 HOH 4 104 1 HOH HOH A . E 3 HOH 5 105 14 HOH HOH A . E 3 HOH 6 106 4 HOH HOH A . E 3 HOH 7 107 5 HOH HOH A . E 3 HOH 8 108 9 HOH HOH A . E 3 HOH 9 109 11 HOH HOH A . F 3 HOH 1 201 8 HOH HOH B . F 3 HOH 2 202 7 HOH HOH B . F 3 HOH 3 203 13 HOH HOH B . F 3 HOH 4 204 12 HOH HOH B . F 3 HOH 5 205 15 HOH HOH B . G 3 HOH 1 101 16 HOH HOH C . G 3 HOH 2 102 2 HOH HOH C . G 3 HOH 3 103 6 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 10260 ? 1 MORE -92 ? 1 'SSA (A^2)' 8910 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 22_554 z+1/4,-y+1/4,x-1/4 0.0000000000 0.0000000000 1.0000000000 26.0400000000 0.0000000000 -1.0000000000 0.0000000000 26.0400000000 1.0000000000 0.0000000000 0.0000000000 -26.0400000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2018-10-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 14.8560 12.1582 0.2359 0.1447 0.1305 0.1121 0.0500 0.1182 0.0285 3.5037 0.5305 3.7874 1.0536 1.9779 1.3480 -0.0638 -0.0593 0.1231 0.0110 -0.0360 0.0395 -0.0229 -0.0935 -0.2495 'X-RAY DIFFRACTION' 2 ? refined 20.0445 6.9970 -2.2030 0.1221 0.1300 0.2536 0.0003 0.1642 -0.0010 2.6207 0.2106 6.4907 0.1899 3.4266 -0.3412 -0.2273 -0.0865 0.3137 -0.0764 -0.2128 -0.1708 -0.0872 0.0029 -0.0245 'X-RAY DIFFRACTION' 3 ? refined 13.2595 19.6233 -1.2087 0.3292 0.1321 0.0659 0.1386 0.0951 0.0101 6.6954 0.5531 2.1998 1.0348 1.9999 1.1008 0.3721 -0.1106 -0.2616 0.0886 -0.1710 -0.1436 -0.2914 -0.5938 -0.2740 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 B 0 B 30 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 0 A 30 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 C 1 C 30 ? ? ? ? ? ? # _pdbx_phasing_MR.entry_id 6G6D _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 4.160 _pdbx_phasing_MR.d_res_low_rotation 60.140 _pdbx_phasing_MR.d_res_high_translation 4.160 _pdbx_phasing_MR.d_res_low_translation 60.140 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.25 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.6.1 3 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 4 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 5 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD A GLN 5 ? A OE1 A GLN 5 ? A 0.801 1.235 -0.434 0.022 N 2 1 CD A GLN 5 ? B OE1 A GLN 5 ? B 0.865 1.235 -0.370 0.022 N 3 1 CD A GLN 5 ? A NE2 A GLN 5 ? A 1.554 1.324 0.230 0.025 N 4 1 CD A GLN 5 ? B NE2 A GLN 5 ? B 1.602 1.324 0.278 0.025 N 5 1 CD A LYS 8 ? ? CE A LYS 8 ? ? 1.052 1.508 -0.456 0.025 N 6 1 CD A GLU 16 ? ? OE1 A GLU 16 ? ? 1.367 1.252 0.115 0.011 N 7 1 CD A GLU 16 ? ? OE2 A GLU 16 ? ? 1.375 1.252 0.123 0.011 N 8 1 C A SER 20 ? ? O A SER 20 ? ? 1.344 1.229 0.115 0.019 N 9 1 CB A SER 27 ? ? OG A SER 27 ? ? 1.307 1.418 -0.111 0.013 N 10 1 CD B LYS 8 ? ? CE B LYS 8 ? ? 2.850 1.508 1.342 0.025 N 11 1 CD B GLU 9 ? B OE1 B GLU 9 ? B 1.325 1.252 0.073 0.011 N 12 1 N B LEU 17 ? ? CA B LEU 17 ? ? 1.602 1.459 0.143 0.020 N 13 1 CD B GLU 23 ? ? OE2 B GLU 23 ? ? 1.319 1.252 0.067 0.011 N 14 1 CG B LYS 29 ? ? CD B LYS 29 ? ? 1.297 1.520 -0.223 0.034 N 15 1 CG C GLU 2 ? ? CD C GLU 2 ? ? 1.723 1.515 0.208 0.015 N 16 1 CB C LYS 8 ? ? CG C LYS 8 ? ? 1.958 1.521 0.437 0.027 N 17 1 CD C LYS 29 ? ? CE C LYS 29 ? ? 1.081 1.508 -0.427 0.025 N 18 1 N C GLY 30 ? ? CA C GLY 30 ? ? 1.599 1.456 0.143 0.015 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 OE1 A GLN 5 ? A CD A GLN 5 ? A NE2 A GLN 5 ? A 140.81 121.90 18.91 2.30 N 2 1 CG A GLN 5 ? A CD A GLN 5 ? A OE1 A GLN 5 ? A 75.69 121.60 -45.91 2.00 N 3 1 CG A GLN 5 ? B CD A GLN 5 ? B OE1 A GLN 5 ? B 135.47 121.60 13.87 2.00 N 4 1 CG A GLN 5 ? A CD A GLN 5 ? A NE2 A GLN 5 ? A 72.40 116.70 -44.30 2.40 N 5 1 CG A GLN 5 ? B CD A GLN 5 ? B NE2 A GLN 5 ? B 87.55 116.70 -29.15 2.40 N 6 1 CG A LYS 8 ? ? CD A LYS 8 ? ? CE A LYS 8 ? ? 139.25 111.90 27.35 3.00 N 7 1 O B ACE 0 ? ? C B ACE 0 ? ? N B GLY 1 ? ? 112.52 123.20 -10.68 1.70 Y 8 1 CG B LYS 8 ? ? CD B LYS 8 ? ? CE B LYS 8 ? ? 69.09 111.90 -42.81 3.00 N 9 1 CD B LYS 8 ? ? CE B LYS 8 ? ? NZ B LYS 8 ? ? 95.43 111.70 -16.27 2.30 N 10 1 CG C GLU 2 ? ? CD C GLU 2 ? ? OE1 C GLU 2 ? ? 47.80 118.30 -70.50 2.00 N 11 1 CG C GLU 2 ? ? CD C GLU 2 ? ? OE2 C GLU 2 ? ? 165.93 118.30 47.63 2.00 N 12 1 CA C LYS 8 ? ? CB C LYS 8 ? ? CG C LYS 8 ? ? 87.78 113.40 -25.62 2.20 N 13 1 CD C LYS 15 ? ? CE C LYS 15 ? ? NZ C LYS 15 ? ? 126.39 111.70 14.69 2.30 N 14 1 CG C LYS 22 ? ? CD C LYS 22 ? ? CE C LYS 22 ? ? 92.48 111.90 -19.42 3.00 N # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id GLN _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 5 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.091 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A NH2 31 ? A NH2 32 2 1 Y 1 B NH2 31 ? B NH2 32 3 1 Y 1 C ACE 0 ? C ACE 1 4 1 Y 1 C NH2 31 ? C NH2 32 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Engineering and Physical Sciences Research Council' 'United Kingdom' EP/G036764/1 1 'European Research Council' 'United Kingdom' 340764 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'equilibrium centrifugation' _pdbx_struct_assembly_auth_evidence.details ? #