HEADER DE NOVO PROTEIN 01-APR-18 6G6D TITLE CRYSTAL STRUCTURE OF A PARALLEL SIX-HELIX COILED COIL CC-TYPE2-LL-SG COMPND MOL_ID: 1; COMPND 2 MOLECULE: CC-TYPE2-LL-SG; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 OTHER_DETAILS: SOLID-PHASE PEPTIDE SYNTHESIS USING THE FMOC-BASED SOURCE 6 STRATEGY KEYWDS DE NOVO, COILED COIL, ALPHA-HELICAL BUNDLE, SYNTHETIC CONSTRUCT, DE KEYWDS 2 NOVO PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.G.RHYS,R.L.BRADY,D.N.WOOLFSON REVDAT 1 17-OCT-18 6G6D 0 JRNL AUTH G.G.RHYS,C.W.WOOD,E.J.M.LANG,A.J.MULHOLLAND,R.L.BRADY, JRNL AUTH 2 A.R.THOMSON,D.N.WOOLFSON JRNL TITL MAINTAINING AND BREAKING SYMMETRY IN HOMOMERIC COILED-COIL JRNL TITL 2 ASSEMBLIES. JRNL REF NAT COMMUN V. 9 4132 2018 JRNL REFN ESSN 2041-1723 JRNL PMID 30297707 JRNL DOI 10.1038/S41467-018-06391-Y REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 73.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 12054 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 601 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 862 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3750 REMARK 3 BIN FREE R VALUE SET COUNT : 39 REMARK 3 BIN FREE R VALUE : 0.3630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 693 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 17 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.119 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.116 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.100 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.141 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 736 ; 0.039 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 754 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 996 ; 3.309 ; 2.040 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1772 ; 1.372 ; 2.998 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 105 ; 5.900 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 24 ;40.303 ;26.667 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 161 ;18.681 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 120 ; 0.192 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 803 ; 0.017 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 117 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 30 REMARK 3 ORIGIN FOR THE GROUP (A): 14.8560 12.1582 0.2359 REMARK 3 T TENSOR REMARK 3 T11: 0.1447 T22: 0.1305 REMARK 3 T33: 0.1121 T12: 0.0500 REMARK 3 T13: 0.1182 T23: 0.0285 REMARK 3 L TENSOR REMARK 3 L11: 3.5037 L22: 0.5305 REMARK 3 L33: 3.7874 L12: 1.0536 REMARK 3 L13: 1.9779 L23: 1.3480 REMARK 3 S TENSOR REMARK 3 S11: -0.0638 S12: 0.0110 S13: -0.0360 REMARK 3 S21: -0.0229 S22: -0.0593 S23: 0.0395 REMARK 3 S31: -0.0935 S32: -0.2495 S33: 0.1231 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 30 REMARK 3 ORIGIN FOR THE GROUP (A): 20.0445 6.9970 -2.2030 REMARK 3 T TENSOR REMARK 3 T11: 0.1221 T22: 0.1300 REMARK 3 T33: 0.2536 T12: 0.0003 REMARK 3 T13: 0.1642 T23: -0.0010 REMARK 3 L TENSOR REMARK 3 L11: 2.6207 L22: 0.2106 REMARK 3 L33: 6.4907 L12: 0.1899 REMARK 3 L13: 3.4266 L23: -0.3412 REMARK 3 S TENSOR REMARK 3 S11: -0.2273 S12: -0.0764 S13: -0.2128 REMARK 3 S21: -0.0872 S22: -0.0865 S23: -0.1708 REMARK 3 S31: 0.0029 S32: -0.0245 S33: 0.3137 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 30 REMARK 3 ORIGIN FOR THE GROUP (A): 13.2595 19.6233 -1.2087 REMARK 3 T TENSOR REMARK 3 T11: 0.3292 T22: 0.1321 REMARK 3 T33: 0.0659 T12: 0.1386 REMARK 3 T13: 0.0951 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 6.6954 L22: 0.5531 REMARK 3 L33: 2.1998 L12: 1.0348 REMARK 3 L13: 1.9999 L23: 1.1008 REMARK 3 S TENSOR REMARK 3 S11: 0.3721 S12: 0.0886 S13: -0.1710 REMARK 3 S21: -0.2914 S22: -0.1106 S23: -0.1436 REMARK 3 S31: -0.5938 S32: -0.2740 S33: -0.2616 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6G6D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-APR-18. REMARK 100 THE DEPOSITION ID IS D_1200009466. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JAN-16 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12704 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 73.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 70.00 REMARK 200 R MERGE (I) : 0.15200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 69.80 REMARK 200 R MERGE FOR SHELL (I) : 8.79900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.1 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM POTASSIUM FORMATE AND 10 % W/V REMARK 280 PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 52.08000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.08000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.08000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.08000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 52.08000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.08000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 52.08000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 52.08000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 52.08000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 52.08000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 52.08000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 52.08000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 52.08000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 52.08000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 52.08000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 52.08000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 52.08000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 52.08000 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 78.12000 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 26.04000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 26.04000 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 78.12000 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 78.12000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 78.12000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 26.04000 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 26.04000 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 78.12000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 26.04000 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 78.12000 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 26.04000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 78.12000 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 26.04000 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 26.04000 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 26.04000 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 78.12000 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 26.04000 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 78.12000 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 78.12000 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 78.12000 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 26.04000 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 26.04000 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 78.12000 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 78.12000 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 26.04000 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 26.04000 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 26.04000 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 26.04000 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 78.12000 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 26.04000 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 78.12000 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 26.04000 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 78.12000 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 78.12000 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 78.12000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -92.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 26.04000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 26.04000 REMARK 350 BIOMT3 2 1.000000 0.000000 0.000000 -26.04000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 NH2 A 31 REMARK 465 NH2 B 31 REMARK 465 ACE C 0 REMARK 465 NH2 C 31 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN A 5 OE1 NE2 REMARK 480 LYS A 8 CE NZ REMARK 480 LYS B 8 CE NZ REMARK 480 LYS B 29 CD CE NZ REMARK 480 GLU C 2 CD OE1 OE2 REMARK 480 LYS C 8 CG CD CE NZ REMARK 480 LYS C 22 CE NZ REMARK 480 LYS C 29 CE NZ REMARK 480 GLY C 30 CA C O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN A 5 CD GLN A 5 OE1 -0.434 REMARK 500 GLN A 5 CD GLN A 5 OE1 -0.370 REMARK 500 GLN A 5 CD GLN A 5 NE2 0.230 REMARK 500 GLN A 5 CD GLN A 5 NE2 0.278 REMARK 500 LYS A 8 CD LYS A 8 CE -0.456 REMARK 500 GLU A 16 CD GLU A 16 OE1 0.115 REMARK 500 GLU A 16 CD GLU A 16 OE2 0.123 REMARK 500 SER A 20 C SER A 20 O 0.115 REMARK 500 SER A 27 CB SER A 27 OG -0.111 REMARK 500 LYS B 8 CD LYS B 8 CE 1.342 REMARK 500 GLU B 9 CD GLU B 9 OE1 0.073 REMARK 500 LEU B 17 N LEU B 17 CA 0.143 REMARK 500 GLU B 23 CD GLU B 23 OE2 0.067 REMARK 500 LYS B 29 CG LYS B 29 CD -0.223 REMARK 500 GLU C 2 CG GLU C 2 CD 0.208 REMARK 500 LYS C 8 CB LYS C 8 CG 0.437 REMARK 500 LYS C 29 CD LYS C 29 CE -0.427 REMARK 500 GLY C 30 N GLY C 30 CA 0.143 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN A 5 OE1 - CD - NE2 ANGL. DEV. = 18.9 DEGREES REMARK 500 GLN A 5 CG - CD - OE1 ANGL. DEV. = -45.9 DEGREES REMARK 500 GLN A 5 CG - CD - OE1 ANGL. DEV. = 13.9 DEGREES REMARK 500 GLN A 5 CG - CD - NE2 ANGL. DEV. = -44.3 DEGREES REMARK 500 GLN A 5 CG - CD - NE2 ANGL. DEV. = -29.1 DEGREES REMARK 500 LYS A 8 CG - CD - CE ANGL. DEV. = 27.4 DEGREES REMARK 500 ACE B 0 O - C - N ANGL. DEV. = -10.7 DEGREES REMARK 500 LYS B 8 CG - CD - CE ANGL. DEV. = -42.8 DEGREES REMARK 500 LYS B 8 CD - CE - NZ ANGL. DEV. = -16.3 DEGREES REMARK 500 GLU C 2 CG - CD - OE1 ANGL. DEV. = -70.5 DEGREES REMARK 500 GLU C 2 CG - CD - OE2 ANGL. DEV. = 47.6 DEGREES REMARK 500 LYS C 8 CA - CB - CG ANGL. DEV. = -25.6 DEGREES REMARK 500 LYS C 15 CD - CE - NZ ANGL. DEV. = 14.7 DEGREES REMARK 500 LYS C 22 CG - CD - CE ANGL. DEV. = -19.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 GLN A 5 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE B 0 and GLY B 1 DBREF 6G6D A 0 31 PDB 6G6D 6G6D 0 31 DBREF 6G6D B 0 31 PDB 6G6D 6G6D 0 31 DBREF 6G6D C 0 31 PDB 6G6D 6G6D 0 31 SEQRES 1 A 32 ACE GLY GLU LEU ALA GLN SER LEU LYS GLU LEU ALA LYS SEQRES 2 A 32 SER LEU LYS GLU LEU ALA TRP SER LEU LYS GLU LEU ALA SEQRES 3 A 32 GLN SER LEU LYS GLY NH2 SEQRES 1 B 32 ACE GLY GLU LEU ALA GLN SER LEU LYS GLU LEU ALA LYS SEQRES 2 B 32 SER LEU LYS GLU LEU ALA TRP SER LEU LYS GLU LEU ALA SEQRES 3 B 32 GLN SER LEU LYS GLY NH2 SEQRES 1 C 32 ACE GLY GLU LEU ALA GLN SER LEU LYS GLU LEU ALA LYS SEQRES 2 C 32 SER LEU LYS GLU LEU ALA TRP SER LEU LYS GLU LEU ALA SEQRES 3 C 32 GLN SER LEU LYS GLY NH2 HET ACE A 0 3 HET ACE B 0 3 HET GOL B 101 6 HETNAM ACE ACETYL GROUP HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 ACE 2(C2 H4 O) FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *17(H2 O) HELIX 1 AA1 GLY A 1 GLY A 30 1 30 HELIX 2 AA2 GLY B 1 GLY B 30 1 30 HELIX 3 AA3 GLU C 2 LYS C 29 1 28 LINK C ACE A 0 N GLY A 1 1555 1555 1.36 LINK C ACE B 0 N GLY B 1 1555 1555 1.37 SITE 1 AC1 1 HOH B 201 SITE 1 AC2 4 GLU B 2 LEU B 3 ALA B 4 GLN B 5 CRYST1 104.160 104.160 104.160 90.00 90.00 90.00 P 41 3 2 72 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009601 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009601 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009601 0.00000 HETATM 1 C ACE A 0 7.343 6.877 -20.412 1.00122.93 C ANISOU 1 C ACE A 0 15623 15562 15520 -891 1853 -1271 C HETATM 2 O ACE A 0 7.064 7.480 -19.351 1.00107.90 O ANISOU 2 O ACE A 0 13667 13735 13592 -787 1766 -1255 O HETATM 3 CH3 ACE A 0 8.114 7.697 -21.743 1.00110.61 C ANISOU 3 CH3 ACE A 0 14118 13953 13954 -921 1822 -1273 C