HEADER SIGNALING PROTEIN 13-APR-18 6GAY TITLE A FAST RECOVERING FULL-LENGTH LOV PROTEIN (DSLOV) FROM THE MARINE TITLE 2 PHOTOTROPHIC BACTERIUM DINOROSEOBACTER SHIBAE (DARK STATE) - M49I TITLE 3 MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE BLUE-LIGHT PHOTORECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 OTHER_DETAILS: C-TERMINAL HEXA-HISTIDINE-TAGGED FUSION PROTEINS (TAG COMPND 7 SEQUENCE: LEHHHHHH) IN E. COLI BL21(DE3) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DINOROSEOBACTER SHIBAE (STRAIN DSM 16493 / SOURCE 3 NCIMB 14021 / DFL 12); SOURCE 4 ORGANISM_TAXID: 398580; SOURCE 5 STRAIN: DSM 16493 / NCIMB 14021 / DFL 12; SOURCE 6 GENE: DSHI_2006; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS LIGHT-OXYGEN-VOLTAGE, LOV, PAS, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.GRANZIN,R.BATRA-SAFFERLING,K.ROELLEN REVDAT 3 17-JAN-24 6GAY 1 REMARK REVDAT 2 22-AUG-18 6GAY 1 JRNL REVDAT 1 18-JUL-18 6GAY 0 JRNL AUTH T.FETTWEISS,K.ROLLEN,J.GRANZIN,O.REINERS,S.ENDRES,T.DREPPER, JRNL AUTH 2 D.WILLBOLD,K.E.JAEGER,R.BATRA-SAFFERLING,U.KRAUSS JRNL TITL MECHANISTIC BASIS OF THE FAST DARK RECOVERY OF THE SHORT LOV JRNL TITL 2 PROTEIN DSLOV FROM DINOROSEOBACTER SHIBAE. JRNL REF BIOCHEMISTRY V. 57 4833 2018 JRNL REFN ISSN 1520-4995 JRNL PMID 29989797 JRNL DOI 10.1021/ACS.BIOCHEM.8B00645 REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1-2155_1692: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 22251 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1138 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.9025 - 3.7194 1.00 2845 150 0.1443 0.1774 REMARK 3 2 3.7194 - 2.9524 1.00 2692 137 0.1545 0.1978 REMARK 3 3 2.9524 - 2.5792 1.00 2621 142 0.1884 0.2312 REMARK 3 4 2.5792 - 2.3434 1.00 2634 135 0.1867 0.2397 REMARK 3 5 2.3434 - 2.1755 1.00 2585 146 0.1701 0.2298 REMARK 3 6 2.1755 - 2.0472 1.00 2588 157 0.1822 0.2297 REMARK 3 7 2.0472 - 1.9447 1.00 2570 138 0.2035 0.2655 REMARK 3 8 1.9447 - 1.8600 0.99 2578 133 0.2254 0.2721 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.570 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.020 1909 REMARK 3 ANGLE : 1.624 2624 REMARK 3 CHIRALITY : 0.102 282 REMARK 3 PLANARITY : 0.012 343 REMARK 3 DIHEDRAL : 16.428 1146 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.9456 -5.0429 -13.7320 REMARK 3 T TENSOR REMARK 3 T11: 0.2997 T22: 0.3713 REMARK 3 T33: 0.4353 T12: 0.0501 REMARK 3 T13: 0.0096 T23: -0.0112 REMARK 3 L TENSOR REMARK 3 L11: 4.2459 L22: 2.4866 REMARK 3 L33: 2.7944 L12: -2.1439 REMARK 3 L13: 1.4911 L23: 0.6541 REMARK 3 S TENSOR REMARK 3 S11: 0.1746 S12: 0.1713 S13: 1.0190 REMARK 3 S21: -0.0703 S22: 0.1328 S23: 0.8893 REMARK 3 S31: -0.2969 S32: -0.6968 S33: -0.4054 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 42 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0071 -4.4615 -19.0420 REMARK 3 T TENSOR REMARK 3 T11: 0.2326 T22: 0.3015 REMARK 3 T33: 0.2947 T12: -0.0298 REMARK 3 T13: 0.0288 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 7.0549 L22: 9.7386 REMARK 3 L33: 7.0592 L12: -5.5276 REMARK 3 L13: -0.4293 L23: -5.2390 REMARK 3 S TENSOR REMARK 3 S11: -0.0679 S12: 0.0409 S13: 0.1583 REMARK 3 S21: -0.2818 S22: -0.0895 S23: -0.8355 REMARK 3 S31: -0.0883 S32: 0.2496 S33: 0.1523 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 48 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.9933 -3.9193 -10.8876 REMARK 3 T TENSOR REMARK 3 T11: 0.2201 T22: 0.2107 REMARK 3 T33: 0.1977 T12: 0.0124 REMARK 3 T13: -0.0199 T23: -0.0425 REMARK 3 L TENSOR REMARK 3 L11: 4.5028 L22: 8.2141 REMARK 3 L33: 8.2926 L12: 3.2592 REMARK 3 L13: -6.0037 L23: -4.1293 REMARK 3 S TENSOR REMARK 3 S11: 0.2667 S12: -0.1960 S13: 0.5333 REMARK 3 S21: 0.0914 S22: -0.1919 S23: 0.3131 REMARK 3 S31: -0.7114 S32: -0.2330 S33: -0.0151 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 54 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3684 -10.7250 -6.4964 REMARK 3 T TENSOR REMARK 3 T11: 0.2139 T22: 0.3066 REMARK 3 T33: 0.2084 T12: 0.0301 REMARK 3 T13: -0.0058 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 4.8713 L22: 8.9381 REMARK 3 L33: 8.3688 L12: -5.0996 REMARK 3 L13: -3.8658 L23: 1.8631 REMARK 3 S TENSOR REMARK 3 S11: -0.0148 S12: -0.0019 S13: 0.0922 REMARK 3 S21: -0.0634 S22: 0.2145 S23: 0.0099 REMARK 3 S31: 0.1964 S32: -0.2540 S33: -0.2676 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.5201 -12.1749 -8.9215 REMARK 3 T TENSOR REMARK 3 T11: 0.2705 T22: 0.2535 REMARK 3 T33: 0.2843 T12: 0.0347 REMARK 3 T13: -0.0433 T23: 0.0151 REMARK 3 L TENSOR REMARK 3 L11: 3.6124 L22: 0.4494 REMARK 3 L33: 1.4863 L12: 1.2206 REMARK 3 L13: -1.1629 L23: -0.2598 REMARK 3 S TENSOR REMARK 3 S11: 0.0169 S12: -0.3421 S13: -0.2996 REMARK 3 S21: 0.1783 S22: -0.0901 S23: -0.0999 REMARK 3 S31: -0.0218 S32: 0.2017 S33: 0.1130 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 76 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.9861 -16.9943 -21.7033 REMARK 3 T TENSOR REMARK 3 T11: 0.1832 T22: 0.2426 REMARK 3 T33: 0.2337 T12: 0.0165 REMARK 3 T13: -0.0065 T23: -0.0402 REMARK 3 L TENSOR REMARK 3 L11: 0.6921 L22: 3.5924 REMARK 3 L33: 4.9568 L12: 0.0998 REMARK 3 L13: 0.4811 L23: -2.2026 REMARK 3 S TENSOR REMARK 3 S11: 0.0535 S12: 0.0479 S13: -0.0906 REMARK 3 S21: -0.1133 S22: 0.0490 S23: -0.0805 REMARK 3 S31: 0.2079 S32: 0.1719 S33: -0.0817 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 111 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.1169 -9.0747 -20.7269 REMARK 3 T TENSOR REMARK 3 T11: 0.2159 T22: 0.2224 REMARK 3 T33: 0.1899 T12: 0.0392 REMARK 3 T13: -0.0058 T23: -0.0167 REMARK 3 L TENSOR REMARK 3 L11: 7.0066 L22: 4.7814 REMARK 3 L33: 2.4024 L12: 5.7775 REMARK 3 L13: -1.7083 L23: -1.5199 REMARK 3 S TENSOR REMARK 3 S11: -0.0489 S12: 0.1717 S13: 0.3595 REMARK 3 S21: -0.1058 S22: 0.1079 S23: 0.5190 REMARK 3 S31: -0.0655 S32: -0.0992 S33: 0.0272 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 123 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.9320 9.6442 -25.8094 REMARK 3 T TENSOR REMARK 3 T11: 0.5861 T22: 0.3356 REMARK 3 T33: 0.7027 T12: -0.0818 REMARK 3 T13: 0.0774 T23: 0.0670 REMARK 3 L TENSOR REMARK 3 L11: 1.9964 L22: 5.8211 REMARK 3 L33: 3.6075 L12: -3.2020 REMARK 3 L13: 0.4698 L23: -2.3016 REMARK 3 S TENSOR REMARK 3 S11: 0.5759 S12: 0.1947 S13: 2.5989 REMARK 3 S21: -0.1386 S22: 0.2809 S23: 0.8530 REMARK 3 S31: -1.4961 S32: 0.2828 S33: -0.7464 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 128 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1307 -9.8624 -17.7418 REMARK 3 T TENSOR REMARK 3 T11: 0.1604 T22: 0.1766 REMARK 3 T33: 0.1813 T12: 0.0426 REMARK 3 T13: -0.0056 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 8.4330 L22: 7.6585 REMARK 3 L33: 7.0450 L12: 7.3572 REMARK 3 L13: -4.9034 L23: -5.8456 REMARK 3 S TENSOR REMARK 3 S11: 0.4371 S12: -0.3991 S13: 0.2022 REMARK 3 S21: 0.3490 S22: -0.4458 S23: 0.1342 REMARK 3 S31: -0.2551 S32: 0.1744 S33: -0.0121 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 500 THROUGH 500 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.8189 -13.3146 -19.7363 REMARK 3 T TENSOR REMARK 3 T11: 0.2366 T22: 0.3274 REMARK 3 T33: 0.3021 T12: 0.0146 REMARK 3 T13: 0.0012 T23: -0.1016 REMARK 3 L TENSOR REMARK 3 L11: 3.5230 L22: 2.1901 REMARK 3 L33: 6.5789 L12: -0.7544 REMARK 3 L13: -4.6126 L23: 0.8847 REMARK 3 S TENSOR REMARK 3 S11: -0.1022 S12: 0.3663 S13: -0.0101 REMARK 3 S21: -0.0481 S22: 0.6646 S23: -0.4755 REMARK 3 S31: 0.6901 S32: 1.0302 S33: -0.4668 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 34 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.8308 -21.2072 -41.9003 REMARK 3 T TENSOR REMARK 3 T11: 0.3265 T22: 0.3512 REMARK 3 T33: 0.3059 T12: -0.0650 REMARK 3 T13: -0.0193 T23: -0.0960 REMARK 3 L TENSOR REMARK 3 L11: 6.0207 L22: 8.9302 REMARK 3 L33: 7.3791 L12: -1.6596 REMARK 3 L13: 1.4941 L23: -4.6114 REMARK 3 S TENSOR REMARK 3 S11: -0.1943 S12: 0.3304 S13: -0.3248 REMARK 3 S21: -0.3807 S22: 0.2211 S23: 0.0143 REMARK 3 S31: 0.4004 S32: 0.0872 S33: 0.0183 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 54 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.1745 -9.3251 -46.1904 REMARK 3 T TENSOR REMARK 3 T11: 0.3649 T22: 0.3878 REMARK 3 T33: 0.3629 T12: -0.1204 REMARK 3 T13: -0.0627 T23: 0.0925 REMARK 3 L TENSOR REMARK 3 L11: 5.0164 L22: 6.5553 REMARK 3 L33: 8.7413 L12: 4.9246 REMARK 3 L13: -6.4598 L23: -6.7441 REMARK 3 S TENSOR REMARK 3 S11: -0.3304 S12: 1.4300 S13: 1.2278 REMARK 3 S21: 0.0413 S22: 0.2681 S23: 0.4748 REMARK 3 S31: -0.6869 S32: 0.1338 S33: -0.0363 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 61 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.3268 -16.6337 -51.3961 REMARK 3 T TENSOR REMARK 3 T11: 0.4729 T22: 0.6591 REMARK 3 T33: 0.2760 T12: -0.1352 REMARK 3 T13: 0.0358 T23: -0.0182 REMARK 3 L TENSOR REMARK 3 L11: 8.9686 L22: 7.8815 REMARK 3 L33: 7.5997 L12: -4.7321 REMARK 3 L13: 8.1374 L23: -5.1785 REMARK 3 S TENSOR REMARK 3 S11: 0.3104 S12: 1.2989 S13: 0.2235 REMARK 3 S21: -0.8830 S22: -0.0957 S23: 0.0306 REMARK 3 S31: 1.0613 S32: 0.4219 S33: -0.1722 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 72 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.7444 -14.1093 -39.1993 REMARK 3 T TENSOR REMARK 3 T11: 0.2561 T22: 0.3878 REMARK 3 T33: 0.2428 T12: 0.0248 REMARK 3 T13: 0.0590 T23: -0.0536 REMARK 3 L TENSOR REMARK 3 L11: 2.3739 L22: 1.8273 REMARK 3 L33: 5.6924 L12: 1.5012 REMARK 3 L13: -0.4661 L23: -2.4880 REMARK 3 S TENSOR REMARK 3 S11: -0.0714 S12: 0.3769 S13: -0.0210 REMARK 3 S21: -0.1880 S22: -0.0185 S23: -0.1811 REMARK 3 S31: 0.0766 S32: 0.3362 S33: 0.0843 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 94 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.1000 -14.7883 -35.6543 REMARK 3 T TENSOR REMARK 3 T11: 0.1536 T22: 0.2060 REMARK 3 T33: 0.1889 T12: 0.0108 REMARK 3 T13: -0.0078 T23: -0.0294 REMARK 3 L TENSOR REMARK 3 L11: 3.1977 L22: 4.0641 REMARK 3 L33: 4.3299 L12: 0.5782 REMARK 3 L13: -0.5302 L23: -1.3086 REMARK 3 S TENSOR REMARK 3 S11: 0.0062 S12: 0.1420 S13: -0.0871 REMARK 3 S21: -0.0645 S22: 0.1723 S23: 0.1458 REMARK 3 S31: 0.1245 S32: 0.0517 S33: -0.1602 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 128 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.5249 -13.7726 -37.0848 REMARK 3 T TENSOR REMARK 3 T11: 0.2110 T22: 0.2876 REMARK 3 T33: 0.2128 T12: 0.0084 REMARK 3 T13: -0.0182 T23: -0.0298 REMARK 3 L TENSOR REMARK 3 L11: 6.9562 L22: 3.7225 REMARK 3 L33: 8.4278 L12: -2.0568 REMARK 3 L13: 0.6114 L23: -1.2632 REMARK 3 S TENSOR REMARK 3 S11: -0.0986 S12: 0.2199 S13: 0.1201 REMARK 3 S21: -0.8681 S22: 0.1533 S23: -0.1885 REMARK 3 S31: -0.1422 S32: -0.0787 S33: -0.0850 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 500 THROUGH 500 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3322 -16.7974 -40.2354 REMARK 3 T TENSOR REMARK 3 T11: 0.2626 T22: 0.4036 REMARK 3 T33: 0.2544 T12: -0.0589 REMARK 3 T13: 0.0133 T23: -0.0711 REMARK 3 L TENSOR REMARK 3 L11: 8.9657 L22: 9.0430 REMARK 3 L33: 7.9904 L12: -0.0452 REMARK 3 L13: 2.4535 L23: -0.8743 REMARK 3 S TENSOR REMARK 3 S11: -0.2994 S12: 0.8889 S13: -0.0364 REMARK 3 S21: -0.2727 S22: -0.0482 S23: -0.1877 REMARK 3 S31: 0.4361 S32: 0.1078 S33: 0.2895 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GAY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-APR-18. REMARK 100 THE DEPOSITION ID IS D_1200009671. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22330 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 45.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.200 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4KUK REMARK 200 REMARK 200 REMARK: TETRAGONAL PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NA-ACETATE, 0.1 M AMMONIUM REMARK 280 SULFATE, 0.3 M SODIUM FORMATE, 3 % PGA-LM, 5 % (W/V) PEG 8000, REMARK 280 PH 5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.19150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.33750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.33750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 39.09575 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.33750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.33750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 117.28725 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.33750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.33750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 39.09575 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.33750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.33750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 117.28725 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 78.19150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 674 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 ARG A 3 REMARK 465 HIS A 4 REMARK 465 TYR A 5 REMARK 465 ARG A 6 REMARK 465 ASP A 7 REMARK 465 LEU A 8 REMARK 465 ILE A 9 REMARK 465 ARG A 10 REMARK 465 ASN A 11 REMARK 465 THR A 12 REMARK 465 PRO A 13 REMARK 465 MET A 14 REMARK 465 PRO A 15 REMARK 465 ASP A 16 REMARK 465 THR A 17 REMARK 465 PRO A 18 REMARK 465 GLN A 19 REMARK 465 ASP A 20 REMARK 465 ILE A 21 REMARK 465 ALA A 22 REMARK 465 ASP A 23 REMARK 465 LEU A 24 REMARK 465 ARG A 25 REMARK 465 ALA A 26 REMARK 465 LEU A 27 REMARK 465 LEU A 28 REMARK 465 ASP A 29 REMARK 465 GLU A 30 REMARK 465 ASP A 31 REMARK 465 HIS A 142 REMARK 465 HIS A 143 REMARK 465 HIS A 144 REMARK 465 HIS A 145 REMARK 465 HIS A 146 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 ARG B 3 REMARK 465 HIS B 4 REMARK 465 TYR B 5 REMARK 465 ARG B 6 REMARK 465 ASP B 7 REMARK 465 LEU B 8 REMARK 465 ILE B 9 REMARK 465 ARG B 10 REMARK 465 ASN B 11 REMARK 465 THR B 12 REMARK 465 PRO B 13 REMARK 465 MET B 14 REMARK 465 PRO B 15 REMARK 465 ASP B 16 REMARK 465 THR B 17 REMARK 465 PRO B 18 REMARK 465 GLN B 19 REMARK 465 ASP B 20 REMARK 465 ILE B 21 REMARK 465 ALA B 22 REMARK 465 ASP B 23 REMARK 465 LEU B 24 REMARK 465 ARG B 25 REMARK 465 ALA B 26 REMARK 465 LEU B 27 REMARK 465 LEU B 28 REMARK 465 ASP B 29 REMARK 465 GLU B 30 REMARK 465 ASP B 31 REMARK 465 GLU B 32 REMARK 465 ALA B 33 REMARK 465 HIS B 142 REMARK 465 HIS B 143 REMARK 465 HIS B 144 REMARK 465 HIS B 145 REMARK 465 HIS B 146 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 32 CG CD OE1 OE2 REMARK 470 GLU A 34 CG CD OE1 OE2 REMARK 470 GLU B 34 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 630 O HOH A 648 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 139 125.89 -172.58 REMARK 500 ASP B 46 33.81 70.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 502 DBREF 6GAY A 1 138 UNP A8LP63 A8LP63_DINSH 2 139 DBREF 6GAY B 1 138 UNP A8LP63 A8LP63_DINSH 2 139 SEQADV 6GAY ILE A 49 UNP A8LP63 MET 50 ENGINEERED MUTATION SEQADV 6GAY LEU A 139 UNP A8LP63 EXPRESSION TAG SEQADV 6GAY GLU A 140 UNP A8LP63 EXPRESSION TAG SEQADV 6GAY HIS A 141 UNP A8LP63 EXPRESSION TAG SEQADV 6GAY HIS A 142 UNP A8LP63 EXPRESSION TAG SEQADV 6GAY HIS A 143 UNP A8LP63 EXPRESSION TAG SEQADV 6GAY HIS A 144 UNP A8LP63 EXPRESSION TAG SEQADV 6GAY HIS A 145 UNP A8LP63 EXPRESSION TAG SEQADV 6GAY HIS A 146 UNP A8LP63 EXPRESSION TAG SEQADV 6GAY ILE B 49 UNP A8LP63 MET 50 ENGINEERED MUTATION SEQADV 6GAY LEU B 139 UNP A8LP63 EXPRESSION TAG SEQADV 6GAY GLU B 140 UNP A8LP63 EXPRESSION TAG SEQADV 6GAY HIS B 141 UNP A8LP63 EXPRESSION TAG SEQADV 6GAY HIS B 142 UNP A8LP63 EXPRESSION TAG SEQADV 6GAY HIS B 143 UNP A8LP63 EXPRESSION TAG SEQADV 6GAY HIS B 144 UNP A8LP63 EXPRESSION TAG SEQADV 6GAY HIS B 145 UNP A8LP63 EXPRESSION TAG SEQADV 6GAY HIS B 146 UNP A8LP63 EXPRESSION TAG SEQRES 1 A 146 MET ARG ARG HIS TYR ARG ASP LEU ILE ARG ASN THR PRO SEQRES 2 A 146 MET PRO ASP THR PRO GLN ASP ILE ALA ASP LEU ARG ALA SEQRES 3 A 146 LEU LEU ASP GLU ASP GLU ALA GLU MET SER VAL VAL PHE SEQRES 4 A 146 SER ASP PRO SER GLN PRO ASP ASN PRO ILE ILE TYR VAL SEQRES 5 A 146 SER ASP ALA PHE LEU VAL GLN THR GLY TYR THR LEU GLU SEQRES 6 A 146 GLU VAL LEU GLY ARG ASN CYS ARG PHE LEU GLN GLY PRO SEQRES 7 A 146 ASP THR ASN PRO HIS ALA VAL GLU ALA ILE ARG GLN GLY SEQRES 8 A 146 LEU LYS ALA GLU THR ARG PHE THR ILE ASP ILE LEU ASN SEQRES 9 A 146 TYR ARG LYS ASP GLY SER ALA PHE VAL ASN ARG LEU ARG SEQRES 10 A 146 ILE ARG PRO ILE TYR ASP PRO GLU GLY ASN LEU MET PHE SEQRES 11 A 146 PHE ALA GLY ALA GLN ASN PRO VAL LEU GLU HIS HIS HIS SEQRES 12 A 146 HIS HIS HIS SEQRES 1 B 146 MET ARG ARG HIS TYR ARG ASP LEU ILE ARG ASN THR PRO SEQRES 2 B 146 MET PRO ASP THR PRO GLN ASP ILE ALA ASP LEU ARG ALA SEQRES 3 B 146 LEU LEU ASP GLU ASP GLU ALA GLU MET SER VAL VAL PHE SEQRES 4 B 146 SER ASP PRO SER GLN PRO ASP ASN PRO ILE ILE TYR VAL SEQRES 5 B 146 SER ASP ALA PHE LEU VAL GLN THR GLY TYR THR LEU GLU SEQRES 6 B 146 GLU VAL LEU GLY ARG ASN CYS ARG PHE LEU GLN GLY PRO SEQRES 7 B 146 ASP THR ASN PRO HIS ALA VAL GLU ALA ILE ARG GLN GLY SEQRES 8 B 146 LEU LYS ALA GLU THR ARG PHE THR ILE ASP ILE LEU ASN SEQRES 9 B 146 TYR ARG LYS ASP GLY SER ALA PHE VAL ASN ARG LEU ARG SEQRES 10 B 146 ILE ARG PRO ILE TYR ASP PRO GLU GLY ASN LEU MET PHE SEQRES 11 B 146 PHE ALA GLY ALA GLN ASN PRO VAL LEU GLU HIS HIS HIS SEQRES 12 B 146 HIS HIS HIS HET FMN A 500 31 HET FMN B 500 31 HET SO4 B 501 5 HET SO4 B 502 5 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM SO4 SULFATE ION HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 3 FMN 2(C17 H21 N4 O9 P) FORMUL 5 SO4 2(O4 S 2-) FORMUL 7 HOH *135(H2 O) HELIX 1 AA1 SER A 53 GLY A 61 1 9 HELIX 2 AA2 THR A 63 LEU A 68 1 6 HELIX 3 AA3 ASN A 71 GLN A 76 5 6 HELIX 4 AA4 ASN A 81 GLU A 95 1 15 HELIX 5 AA5 SER B 53 GLY B 61 1 9 HELIX 6 AA6 THR B 63 LEU B 68 1 6 HELIX 7 AA7 ASN B 71 GLN B 76 5 6 HELIX 8 AA8 ASN B 81 GLU B 95 1 15 SHEET 1 AA110 ILE A 49 VAL A 52 0 SHEET 2 AA110 SER A 36 SER A 40 -1 N PHE A 39 O ILE A 50 SHEET 3 AA110 LEU A 128 GLN A 135 -1 O GLY A 133 N VAL A 38 SHEET 4 AA110 ALA A 111 TYR A 122 -1 N ILE A 121 O MET A 129 SHEET 5 AA110 PHE A 98 TYR A 105 -1 N ASN A 104 O PHE A 112 SHEET 6 AA110 PHE B 98 TYR B 105 -1 O THR B 99 N THR A 99 SHEET 7 AA110 ALA B 111 TYR B 122 -1 O ILE B 118 N PHE B 98 SHEET 8 AA110 LEU B 128 GLN B 135 -1 O MET B 129 N ILE B 121 SHEET 9 AA110 SER B 36 SER B 40 -1 N VAL B 38 O GLY B 133 SHEET 10 AA110 ILE B 49 VAL B 52 -1 O ILE B 50 N PHE B 39 SHEET 1 AA2 6 PRO A 137 GLU A 140 0 SHEET 2 AA2 6 ALA A 111 TYR A 122 -1 N VAL A 113 O VAL A 138 SHEET 3 AA2 6 PHE A 98 TYR A 105 -1 N ASN A 104 O PHE A 112 SHEET 4 AA2 6 PHE B 98 TYR B 105 -1 O THR B 99 N THR A 99 SHEET 5 AA2 6 ALA B 111 TYR B 122 -1 O ILE B 118 N PHE B 98 SHEET 6 AA2 6 PRO B 137 GLU B 140 -1 O VAL B 138 N VAL B 113 SITE 1 AC1 21 VAL A 38 SER A 40 ASN A 71 CYS A 72 SITE 2 AC1 21 ARG A 73 LEU A 75 GLN A 76 VAL A 85 SITE 3 AC1 21 ILE A 88 ARG A 89 LEU A 92 ASN A 104 SITE 4 AC1 21 ASN A 114 LEU A 116 PHE A 131 ALA A 132 SITE 5 AC1 21 GLY A 133 GLN A 135 HOH A 610 HOH A 623 SITE 6 AC1 21 HOH A 624 SITE 1 AC2 23 VAL B 38 SER B 40 ASN B 71 CYS B 72 SITE 2 AC2 23 ARG B 73 LEU B 75 GLN B 76 VAL B 85 SITE 3 AC2 23 ILE B 88 ARG B 89 LEU B 92 ASN B 104 SITE 4 AC2 23 ASN B 114 LEU B 116 PHE B 131 GLY B 133 SITE 5 AC2 23 GLN B 135 HOH B 611 HOH B 616 HOH B 626 SITE 6 AC2 23 HOH B 629 HOH B 631 HOH B 635 SITE 1 AC3 7 ARG A 97 THR A 99 ARG A 117 ARG B 97 SITE 2 AC3 7 THR B 99 ARG B 117 HOH B 603 SITE 1 AC4 7 ARG A 70 ASN A 71 HOH A 626 ARG B 97 SITE 2 AC4 7 HOH B 608 HOH B 610 HOH B 649 CRYST1 56.675 56.675 156.383 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017644 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017644 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006395 0.00000