HEADER TRANSFERASE 13-APR-18 6GB0 TITLE THE STRUCTURE OF VARIANT K294A OF THE MO-INSERTASE DOMAIN CNX1E FROM TITLE 2 ARABIDOPSIS THALIANA IN COMPLEX WITH AMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOLYBDOPTERIN BIOSYNTHESIS PROTEIN CNX1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MOLYBDENUM COFACTOR BIOSYNTHESIS ENZYME CNX1; COMPND 5 EC: 2.10.1.1,2.7.7.75; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: CNX1, AT5G20990, F22D1.6, T10F18.20; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: RK5204; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGPLUS-CNX1E KEYWDS ARABIDOPSIS, ARABIDOPSIS PROTEINS, COENZYMES, METALLOPROTEINS, KEYWDS 2 CATALYTIC DOMAIN, NUCLEOTIDE BINDING, ENTROPIC ENZYME, ADENOSINE KEYWDS 3 MONOPHOSPHATE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.KRAUSZE REVDAT 2 17-JAN-24 6GB0 1 LINK REVDAT 1 18-JUL-18 6GB0 0 JRNL AUTH J.KRAUSZE,T.W.HERCHER,D.ZWERSCHKE,M.L.KIRK,W.BLANKENFELDT, JRNL AUTH 2 R.R.MENDEL,T.KRUSE JRNL TITL THE FUNCTIONAL PRINCIPLE OF EUKARYOTIC MOLYBDENUM JRNL TITL 2 INSERTASES. JRNL REF BIOCHEM. J. V. 475 1739 2018 JRNL REFN ESSN 1470-8728 JRNL PMID 29717023 JRNL DOI 10.1042/BCJ20170935 REMARK 2 REMARK 2 RESOLUTION. 1.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 66.2 REMARK 3 NUMBER OF REFLECTIONS : 32829 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.810 REMARK 3 FREE R VALUE TEST SET COUNT : 1578 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.81 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.87 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 3.58 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 157 REMARK 3 BIN R VALUE (WORKING SET) : 0.2447 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.09 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3095 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 265 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.83230 REMARK 3 B22 (A**2) : 1.32410 REMARK 3 B33 (A**2) : -2.15650 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.270 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.170 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.145 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.285 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.144 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6404 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 11670 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1404 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 975 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6404 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 3 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 440 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6795 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.08 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.72 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 12.69 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 27.5681 19.5594 1.2906 REMARK 3 T TENSOR REMARK 3 T11: -0.1086 T22: -0.1016 REMARK 3 T33: -0.0779 T12: 0.0228 REMARK 3 T13: 0.0284 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 0.3433 L22: 0.5186 REMARK 3 L33: 1.3342 L12: 0.0408 REMARK 3 L13: 0.1796 L23: 0.1006 REMARK 3 S TENSOR REMARK 3 S11: 0.0722 S12: -0.0241 S13: 0.0867 REMARK 3 S21: -0.0046 S22: -0.0323 S23: 0.0432 REMARK 3 S31: -0.2513 S32: -0.1034 S33: -0.0399 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: DATA WERE CORRECTED FOR ANISOTROPY REMARK 3 PRIOR TO REFINEMENT REMARK 4 REMARK 4 6GB0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-APR-18. REMARK 100 THE DEPOSITION ID IS D_1200009678. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : SI111 DOUBLE CRYSTAL WITH REMARK 200 SAGITAL BENDER REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JUN 1, 2017 REMARK 200 DATA SCALING SOFTWARE : STARANISO 1.10.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32849 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.814 REMARK 200 RESOLUTION RANGE LOW (A) : 42.791 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 66.3 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.81 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 16.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.66500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.1 REMARK 200 STARTING MODEL: 5G2R REMARK 200 REMARK 200 REMARK: ISOMETRIC TETRAGONAL PRISM REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M IMIDAZOLE, 0.1 M MES PH 6.5; REMARK 280 0.06 M SODIUM NITRATE, 0.06 M SODIUM PHOSPHATE, 0.06 M AMMONIUM REMARK 280 SULFATE; 20 % (V/V) PEG 500 MME, 10 % PEG 8000, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 33.23500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 61.71000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 66.14000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 33.23500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 61.71000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 66.14000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 33.23500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 61.71000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 66.14000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 33.23500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 61.71000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 66.14000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -93.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 66.47000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -4 REMARK 465 SER A -3 REMARK 465 ARG A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 GLY A 3 REMARK 465 GLN A 4 REMARK 465 GLY A 5 REMARK 465 CYS A 6 REMARK 465 CYS A 7 REMARK 465 GLY A 8 REMARK 465 GLY A 9 REMARK 465 GLY A 10 REMARK 465 GLY A 11 REMARK 465 GLY A 12 REMARK 465 LYS A 13 REMARK 465 THR A 14 REMARK 465 GLU A 15 REMARK 465 SER A 131 REMARK 465 THR A 132 REMARK 465 GLU A 133 REMARK 465 THR A 309 REMARK 465 GLU A 310 REMARK 465 SER A 311 REMARK 465 MET A 312 REMARK 465 LEU A 313 REMARK 465 LYS A 443 REMARK 465 LYS A 444 REMARK 465 ALA A 445 REMARK 465 SER A 446 REMARK 465 LEU A 447 REMARK 465 SER A 448 REMARK 465 GLU A 449 REMARK 465 PRO A 450 REMARK 465 GLY A 451 REMARK 465 SER A 452 REMARK 465 THR A 453 REMARK 465 SER A 454 REMARK 465 GLY A 455 REMARK 465 GLY A 456 REMARK 465 SER A 457 REMARK 465 ALA A 458 REMARK 465 TRP A 459 REMARK 465 SER A 460 REMARK 465 HIS A 461 REMARK 465 PRO A 462 REMARK 465 GLN A 463 REMARK 465 PHE A 464 REMARK 465 GLU A 465 REMARK 465 LYS A 466 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 135 CG CD CE NZ REMARK 470 LYS A 277 CG CD CE NZ REMARK 470 LYS A 290 CD CE NZ REMARK 470 LYS A 307 CG CD CE NZ REMARK 470 LYS A 364 CE NZ REMARK 470 ASP A 435 CG OD1 OD2 REMARK 470 ILE A 436 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CB ILE A 436 CB ILE A 436 3655 1.10 REMARK 500 O HOH A 855 O HOH A 855 2655 1.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 129 -117.57 -94.82 REMARK 500 SER A 269 -143.34 -97.67 REMARK 500 LYS A 297 -53.76 179.84 REMARK 500 LEU A 299 110.16 -161.83 REMARK 500 ASP A 435 113.80 -26.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 864 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH A 865 DISTANCE = 6.80 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 AMP A 501 O2P REMARK 620 2 HOH A 610 O 92.3 REMARK 620 3 HOH A 631 O 90.4 177.3 REMARK 620 4 HOH A 638 O 172.8 92.0 85.3 REMARK 620 5 HOH A 722 O 93.4 89.5 90.8 92.4 REMARK 620 6 HOH A 800 O 94.5 84.0 95.4 80.3 169.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 504 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SASDCM8 RELATED DB: SASBDB DBREF 6GB0 A 1 452 UNP Q39054 CNX1_ARATH 1 452 SEQADV 6GB0 MET A -4 UNP Q39054 INITIATING METHIONINE SEQADV 6GB0 SER A -3 UNP Q39054 EXPRESSION TAG SEQADV 6GB0 ARG A -2 UNP Q39054 EXPRESSION TAG SEQADV 6GB0 GLY A -1 UNP Q39054 EXPRESSION TAG SEQADV 6GB0 SER A 0 UNP Q39054 EXPRESSION TAG SEQADV 6GB0 ALA A 294 UNP Q39054 LYS 294 ENGINEERED MUTATION SEQADV 6GB0 THR A 453 UNP Q39054 EXPRESSION TAG SEQADV 6GB0 SER A 454 UNP Q39054 EXPRESSION TAG SEQADV 6GB0 GLY A 455 UNP Q39054 EXPRESSION TAG SEQADV 6GB0 GLY A 456 UNP Q39054 EXPRESSION TAG SEQADV 6GB0 SER A 457 UNP Q39054 EXPRESSION TAG SEQADV 6GB0 ALA A 458 UNP Q39054 EXPRESSION TAG SEQADV 6GB0 TRP A 459 UNP Q39054 EXPRESSION TAG SEQADV 6GB0 SER A 460 UNP Q39054 EXPRESSION TAG SEQADV 6GB0 HIS A 461 UNP Q39054 EXPRESSION TAG SEQADV 6GB0 PRO A 462 UNP Q39054 EXPRESSION TAG SEQADV 6GB0 GLN A 463 UNP Q39054 EXPRESSION TAG SEQADV 6GB0 PHE A 464 UNP Q39054 EXPRESSION TAG SEQADV 6GB0 GLU A 465 UNP Q39054 EXPRESSION TAG SEQADV 6GB0 LYS A 466 UNP Q39054 EXPRESSION TAG SEQRES 1 A 471 MET SER ARG GLY SER MET GLU GLY GLN GLY CYS CYS GLY SEQRES 2 A 471 GLY GLY GLY GLY LYS THR GLU MET ILE PRO THR GLU GLU SEQRES 3 A 471 ALA LEU ARG ILE VAL PHE GLY VAL SER LYS ARG LEU PRO SEQRES 4 A 471 PRO VAL ILE VAL SER LEU TYR GLU ALA LEU GLY LYS VAL SEQRES 5 A 471 LEU ALA GLU ASP ILE ARG ALA PRO ASP PRO LEU PRO PRO SEQRES 6 A 471 TYR PRO ALA SER VAL LYS ASP GLY TYR ALA VAL VAL ALA SEQRES 7 A 471 SER ASP GLY PRO GLY GLU TYR PRO VAL ILE THR GLU SER SEQRES 8 A 471 ARG ALA GLY ASN ASP GLY LEU GLY VAL THR VAL THR PRO SEQRES 9 A 471 GLY THR VAL ALA TYR VAL THR THR GLY GLY PRO ILE PRO SEQRES 10 A 471 ASP GLY ALA ASP ALA VAL VAL GLN VAL GLU ASP THR LYS SEQRES 11 A 471 VAL ILE GLY ASP VAL SER THR GLU SER LYS ARG VAL LYS SEQRES 12 A 471 ILE LEU ILE GLN THR LYS LYS GLY THR ASP ILE ARG ARG SEQRES 13 A 471 VAL GLY CSX ASP ILE GLU LYS ASP ALA THR VAL LEU THR SEQRES 14 A 471 THR GLY GLU ARG ILE GLY ALA SER GLU ILE GLY LEU LEU SEQRES 15 A 471 ALA THR ALA GLY VAL THR MET VAL LYS VAL TYR PRO MET SEQRES 16 A 471 PRO ILE VAL ALA ILE LEU SER THR GLY ASP GLU LEU VAL SEQRES 17 A 471 GLU PRO THR ALA GLY THR LEU GLY ARG GLY GLN ILE ARG SEQRES 18 A 471 ASP SER ASN ARG ALA MET LEU VAL ALA ALA VAL MET GLN SEQRES 19 A 471 GLN GLN CYS LYS VAL VAL ASP LEU GLY ILE VAL ARG ASP SEQRES 20 A 471 ASP ARG LYS GLU LEU GLU LYS VAL LEU ASP GLU ALA VAL SEQRES 21 A 471 SER SER GLY VAL ASP ILE ILE LEU THR SER GLY GLY VAL SEQRES 22 A 471 SER MET GLY ASP ARG ASP PHE VAL LYS PRO LEU LEU GLU SEQRES 23 A 471 GLU LYS GLY LYS VAL TYR PHE SER LYS VAL LEU MET ALA SEQRES 24 A 471 PRO GLY LYS PRO LEU THR PHE ALA GLU ILE ARG ALA LYS SEQRES 25 A 471 PRO THR GLU SER MET LEU GLY LYS THR VAL LEU ALA PHE SEQRES 26 A 471 GLY LEU PRO GLY ASN PRO VAL SER CYS LEU VAL CYS PHE SEQRES 27 A 471 ASN ILE PHE VAL VAL PRO THR ILE ARG GLN LEU ALA GLY SEQRES 28 A 471 TRP THR SER PRO HIS PRO LEU ARG VAL ARG LEU ARG LEU SEQRES 29 A 471 GLN GLU PRO ILE LYS SER ASP PRO ILE ARG PRO GLU PHE SEQRES 30 A 471 HIS ARG ALA ILE ILE LYS TRP LYS ASP ASN ASP GLY SER SEQRES 31 A 471 GLY THR PRO GLY PHE VAL ALA GLU SER THR GLY HIS GLN SEQRES 32 A 471 MET SER SER ARG LEU LEU SER MET ARG SER ALA ASN ALA SEQRES 33 A 471 LEU LEU GLU LEU PRO ALA THR GLY ASN VAL LEU SER ALA SEQRES 34 A 471 GLY SER SER VAL SER ALA ILE ILE VAL SER ASP ILE SER SEQRES 35 A 471 ALA PHE SER ILE ASP LYS LYS ALA SER LEU SER GLU PRO SEQRES 36 A 471 GLY SER THR SER GLY GLY SER ALA TRP SER HIS PRO GLN SEQRES 37 A 471 PHE GLU LYS MODRES 6GB0 CSX A 154 CYS MODIFIED RESIDUE HET CSX A 154 11 HET AMP A 501 35 HET MG A 502 1 HET EDO A 503 10 HET CL A 504 1 HET CL A 505 1 HETNAM CSX S-OXY CYSTEINE HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 1 CSX C3 H7 N O3 S FORMUL 2 AMP C10 H14 N5 O7 P FORMUL 3 MG MG 2+ FORMUL 4 EDO C2 H6 O2 FORMUL 5 CL 2(CL 1-) FORMUL 7 HOH *265(H2 O) HELIX 1 AA1 THR A 19 SER A 30 1 12 HELIX 2 AA2 LEU A 40 LEU A 44 1 5 HELIX 3 AA3 VAL A 72 GLY A 76 5 5 HELIX 4 AA4 GLY A 170 ALA A 180 1 11 HELIX 5 AA5 SER A 218 GLN A 230 1 13 HELIX 6 AA6 ASP A 243 SER A 257 1 15 HELIX 7 AA7 PHE A 275 GLY A 284 1 10 HELIX 8 AA8 ASN A 325 ALA A 345 1 21 HELIX 9 AA9 ARG A 402 ARG A 407 5 6 SHEET 1 AA1 7 ILE A 17 PRO A 18 0 SHEET 2 AA1 7 LYS A 285 LEU A 292 1 O LEU A 292 N ILE A 17 SHEET 3 AA1 7 PRO A 298 ARG A 305 -1 O GLU A 303 N LYS A 285 SHEET 4 AA1 7 THR A 316 LEU A 322 -1 O ALA A 319 N ALA A 302 SHEET 5 AA1 7 ILE A 261 SER A 265 1 N ILE A 262 O LEU A 318 SHEET 6 AA1 7 VAL A 193 THR A 198 1 N ALA A 194 O ILE A 261 SHEET 7 AA1 7 VAL A 234 VAL A 240 1 O LEU A 237 N ILE A 195 SHEET 1 AA2 3 VAL A 36 SER A 39 0 SHEET 2 AA2 3 MET A 184 TYR A 188 -1 O VAL A 185 N VAL A 38 SHEET 3 AA2 3 VAL A 47 LEU A 48 -1 N VAL A 47 O TYR A 188 SHEET 1 AA3 2 ILE A 52 ARG A 53 0 SHEET 2 AA3 2 THR A 161 LEU A 163 -1 O LEU A 163 N ILE A 52 SHEET 1 AA4 2 ALA A 63 SER A 64 0 SHEET 2 AA4 2 ILE A 149 ARG A 150 -1 O ARG A 150 N ALA A 63 SHEET 1 AA5 6 ALA A 117 GLN A 120 0 SHEET 2 AA5 6 GLY A 68 VAL A 71 -1 N VAL A 71 O ALA A 117 SHEET 3 AA5 6 VAL A 102 VAL A 105 -1 O ALA A 103 N ALA A 70 SHEET 4 AA5 6 GLY A 78 SER A 86 1 N SER A 86 O TYR A 104 SHEET 5 AA5 6 ARG A 136 ILE A 139 -1 O VAL A 137 N TYR A 80 SHEET 6 AA5 6 THR A 124 ILE A 127 -1 N LYS A 125 O LYS A 138 SHEET 1 AA6 2 LEU A 202 VAL A 203 0 SHEET 2 AA6 2 ILE A 215 ARG A 216 1 O ILE A 215 N VAL A 203 SHEET 1 AA7 6 ARG A 354 LEU A 359 0 SHEET 2 AA7 6 GLY A 389 SER A 394 1 O ALA A 392 N ARG A 358 SHEET 3 AA7 6 GLU A 371 LYS A 380 -1 N LYS A 380 O GLY A 389 SHEET 4 AA7 6 ALA A 411 LEU A 415 -1 O LEU A 413 N HIS A 373 SHEET 5 AA7 6 SER A 427 ILE A 432 -1 O ILE A 431 N LEU A 412 SHEET 6 AA7 6 ARG A 354 LEU A 359 -1 N LEU A 357 O VAL A 428 SHEET 1 AA8 2 ILE A 363 LYS A 364 0 SHEET 2 AA8 2 VAL A 421 LEU A 422 -1 O LEU A 422 N ILE A 363 LINK C GLY A 153 N CSX A 154 1555 1555 1.34 LINK C CSX A 154 N ASP A 155 1555 1555 1.34 LINK O2P AMP A 501 MG MG A 502 1555 1555 2.06 LINK MG MG A 502 O HOH A 610 1555 1555 2.09 LINK MG MG A 502 O HOH A 631 1555 1555 2.09 LINK MG MG A 502 O HOH A 638 1555 1555 2.06 LINK MG MG A 502 O HOH A 722 1555 1555 2.07 LINK MG MG A 502 O HOH A 800 1555 3655 2.07 CISPEP 1 LEU A 58 PRO A 59 0 -6.28 CISPEP 2 ALA A 294 PRO A 295 0 8.59 SITE 1 AC1 26 THR A 107 GLY A 108 SER A 197 GLU A 201 SITE 2 AC1 26 LEU A 202 ILE A 215 ASP A 217 SER A 218 SITE 3 AC1 26 ASN A 219 GLY A 266 GLY A 267 SER A 269 SITE 4 AC1 26 GLY A 324 ASN A 325 MG A 502 HOH A 603 SITE 5 AC1 26 HOH A 607 HOH A 610 HOH A 631 HOH A 656 SITE 6 AC1 26 HOH A 669 HOH A 694 HOH A 712 HOH A 722 SITE 7 AC1 26 HOH A 778 HOH A 800 SITE 1 AC2 6 AMP A 501 HOH A 610 HOH A 631 HOH A 638 SITE 2 AC2 6 HOH A 722 HOH A 800 SITE 1 AC3 5 GLY A 166 GLY A 346 TRP A 347 THR A 348 SITE 2 AC3 5 SER A 349 SITE 1 AC4 3 GLY A 296 ARG A 369 HOH A 766 CRYST1 66.470 123.420 132.280 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015044 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008102 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007560 0.00000