data_6GBM # _entry.id 6GBM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.308 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6GBM WWPDB D_1200009708 BMRB 34259 # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution structure of FUS-RRM bound to stem-loop RNA' _pdbx_database_related.db_id 34259 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6GBM _pdbx_database_status.recvd_initial_deposition_date 2018-04-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Loughlin, F.E.' 1 ? 'Allain, F.H.-T.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Mol. Cell' _citation.journal_id_ASTM MOCEFL _citation.journal_id_CSD 2168 _citation.journal_id_ISSN 1097-4164 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 73 _citation.language ? _citation.page_first 490 _citation.page_last 504.e6 _citation.title 'The Solution Structure of FUS Bound to RNA Reveals a Bipartite Mode of RNA Recognition with Both Sequence and Shape Specificity.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.molcel.2018.11.012 _citation.pdbx_database_id_PubMed 30581145 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Loughlin, F.E.' 1 ? primary 'Lukavsky, P.J.' 2 ? primary 'Kazeeva, T.' 3 ? primary 'Reber, S.' 4 ? primary 'Hock, E.M.' 5 ? primary 'Colombo, M.' 6 ? primary 'Von Schroetter, C.' 7 ? primary 'Pauli, P.' 8 ? primary 'Clery, A.' 9 ? primary 'Muhlemann, O.' 10 ? primary 'Polymenidou, M.' 11 ? primary 'Ruepp, M.D.' 12 ? primary 'Allain, F.H.' 13 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RNA-binding protein FUS' 11289.521 1 ? ? ? ? 2 polymer syn ;RNA (5'-R(*GP*GP*CP*AP*GP*AP*UP*UP*AP*CP*AP*AP*UP*UP*CP*UP*AP*UP*UP*UP*GP*CP*C)-3') ; 7286.336 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '75 kDa DNA-pairing protein,Oncogene FUS,Oncogene TLS,POMp75,Translocated in liposarcoma protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFD GKEFSGNPIKVSFATRRADFNR ; ;GSHMDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFD GKEFSGNPIKVSFATRRADFNR ; B ? 2 polyribonucleotide no no GGCAGAUUACAAUUCUAUUUGCC GGCAGAUUACAAUUCUAUUUGCC A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ASP n 1 6 ASN n 1 7 SER n 1 8 ASP n 1 9 ASN n 1 10 ASN n 1 11 THR n 1 12 ILE n 1 13 PHE n 1 14 VAL n 1 15 GLN n 1 16 GLY n 1 17 LEU n 1 18 GLY n 1 19 GLU n 1 20 ASN n 1 21 VAL n 1 22 THR n 1 23 ILE n 1 24 GLU n 1 25 SER n 1 26 VAL n 1 27 ALA n 1 28 ASP n 1 29 TYR n 1 30 PHE n 1 31 LYS n 1 32 GLN n 1 33 ILE n 1 34 GLY n 1 35 ILE n 1 36 ILE n 1 37 LYS n 1 38 THR n 1 39 ASN n 1 40 LYS n 1 41 LYS n 1 42 THR n 1 43 GLY n 1 44 GLN n 1 45 PRO n 1 46 MET n 1 47 ILE n 1 48 ASN n 1 49 LEU n 1 50 TYR n 1 51 THR n 1 52 ASP n 1 53 ARG n 1 54 GLU n 1 55 THR n 1 56 GLY n 1 57 LYS n 1 58 LEU n 1 59 LYS n 1 60 GLY n 1 61 GLU n 1 62 ALA n 1 63 THR n 1 64 VAL n 1 65 SER n 1 66 PHE n 1 67 ASP n 1 68 ASP n 1 69 PRO n 1 70 PRO n 1 71 SER n 1 72 ALA n 1 73 LYS n 1 74 ALA n 1 75 ALA n 1 76 ILE n 1 77 ASP n 1 78 TRP n 1 79 PHE n 1 80 ASP n 1 81 GLY n 1 82 LYS n 1 83 GLU n 1 84 PHE n 1 85 SER n 1 86 GLY n 1 87 ASN n 1 88 PRO n 1 89 ILE n 1 90 LYS n 1 91 VAL n 1 92 SER n 1 93 PHE n 1 94 ALA n 1 95 THR n 1 96 ARG n 1 97 ARG n 1 98 ALA n 1 99 ASP n 1 100 PHE n 1 101 ASN n 1 102 ARG n 2 1 G n 2 2 G n 2 3 C n 2 4 A n 2 5 G n 2 6 A n 2 7 U n 2 8 U n 2 9 A n 2 10 C n 2 11 A n 2 12 A n 2 13 U n 2 14 U n 2 15 C n 2 16 U n 2 17 A n 2 18 U n 2 19 U n 2 20 U n 2 21 G n 2 22 C n 2 23 C n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 102 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'FUS, TLS' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 23 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP FUS_HUMAN P35637 ? 1 ;DNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEF SGNPIKVSFATRRADFNR ; 280 2 PDB 6GBM 6GBM ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6GBM B 5 ? 102 ? P35637 280 ? 377 ? 280 377 2 2 6GBM A 1 ? 23 ? 6GBM 1 ? 23 ? 1 23 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6GBM GLY B 1 ? UNP P35637 ? ? 'expression tag' 276 1 1 6GBM SER B 2 ? UNP P35637 ? ? 'expression tag' 277 2 1 6GBM HIS B 3 ? UNP P35637 ? ? 'expression tag' 278 3 1 6GBM MET B 4 ? UNP P35637 ? ? 'expression tag' 279 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '3D 1H-13C NOESY aromatic' 2 isotropic 2 1 1 '3D 1H-15N NOESY' 1 isotropic 3 1 1 '3D 1H-13C NOESY aliphatic' 2 isotropic 4 1 4 '3D 1H-13C NOESY aliphatic' 1 isotropic 5 1 4 '3D 1H-13C NOESY aromatic' 2 isotropic 6 1 5 '2D 1H-1H NOESY' 1 isotropic 7 1 3 '2D 1H-15N HSQC' 2 isotropic 8 1 1 '2D 1H-15N HSQC' 1 isotropic 9 1 2 '2D 1H-13C HSQC' 2 isotropic 10 1 4 '2D 1H-13C HSQC' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.pressure_units Pa _pdbx_nmr_exptl_sample_conditions.pressure AMBIENT _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 20 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label 303K _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 ;0.8 mM [U-99% 13C; U-99% 15N] FUS-RRM, 0.8 mM [U-99% 15N] RNA stem loop, 20 mM sodium phosphate, 1 mM beta-mercaptoethanol, 90% H2O/10% D2O ; '90% H2O/10% D2O' 13C15NRRM_SL_H2O solution ? 2 ;0.8 mM [U-99% 13C; U-99% 15N] FUS-RRM, 0.8 mM [U-99% 15N] stem-loop RNA, 20 mM sodium phosphate, 1 mM beta-mercaptoethanol, 100% D2O ; '100% D2O' 13C15NRRM_SL_D2O solution ? 3 ;1 mM [U-99% 15N] FUS-RRM, 0.8 mM [U-99% 13C; U-99% 15N] stem-loop RNA, 20 mM sodium phosphate, 1 mM beta-mercaptoethanol, 90% H2O/10% D2O ; '90% H2O/10% D2O' 13C15NRNA_RRM_H2O solution ? 4 ;1.0 mM [U-99% 15N] FUS-RRM, 0.8 mM [U-99% 13C; U-99% 15N] stem-loop RNA, 20 mM sodium phosphate, 1 mM beta-mercaptoethanol, 100% D2O ; '100% D2O' 13C15NRNA_RRM_D2O solution ? 5 '1.0 mM [U-99% 15N] FUS-RRM, 1.0 mM [U-99% 15N] stem-loop RNA, 20 mM sodium phosphate, 1 mM beta-mercaptoethanol, 100% D2O' '100% D2O' 15NRRM_SL_D2O solution ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 Avance ? Bruker 900 ? 2 AvanceIII ? Bruker 700 ? # _pdbx_nmr_refine.entry_id 6GBM _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 6GBM _pdbx_nmr_details.text NULL # _pdbx_nmr_ensemble.entry_id 6GBM _pdbx_nmr_ensemble.conformers_calculated_total_number 500 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6GBM _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 2 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 3 'data analysis' Sparky ? Goddard 4 'peak picking' CANDID ? 'Herrmann, Guntert and Wuthrich' 5 processing TopSpin ? 'Bruker Biospin' 6 collection TopSpin ? 'Bruker Biospin' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6GBM _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6GBM _struct.title 'Solution structure of FUS-RRM bound to stem-loop RNA' _struct.pdbx_descriptor 'RNA-binding protein FUS/RNA Complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6GBM _struct_keywords.text 'RNA, RNA recognition motif, RRM, RNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 22 ? LYS A 31 ? THR B 297 LYS B 306 1 ? 10 HELX_P HELX_P2 AA2 ASP A 68 ? ASP A 80 ? ASP B 343 ASP B 355 1 ? 13 HELX_P HELX_P3 AA3 ARG A 96 ? ASN A 101 ? ARG B 371 ASN B 376 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog1 hydrog ? ? B G 1 N1 ? ? ? 1_555 B C 23 N3 ? ? A G 1 A C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? B G 1 N2 ? ? ? 1_555 B C 23 O2 ? ? A G 1 A C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? B G 1 O6 ? ? ? 1_555 B C 23 N4 ? ? A G 1 A C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? B G 2 N1 ? ? ? 1_555 B C 22 N3 ? ? A G 2 A C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? B G 2 N2 ? ? ? 1_555 B C 22 O2 ? ? A G 2 A C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? B G 2 O6 ? ? ? 1_555 B C 22 N4 ? ? A G 2 A C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? B C 3 N3 ? ? ? 1_555 B G 21 N1 ? ? A C 3 A G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? B C 3 N4 ? ? ? 1_555 B G 21 O6 ? ? A C 3 A G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? B C 3 O2 ? ? ? 1_555 B G 21 N2 ? ? A C 3 A G 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? B A 4 N1 ? ? ? 1_555 B U 20 N3 ? ? A A 4 A U 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? B A 4 N6 ? ? ? 1_555 B U 20 O4 ? ? A A 4 A U 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? B G 5 N1 ? ? ? 1_555 B U 19 O2 ? ? A G 5 A U 19 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog13 hydrog ? ? B G 5 O6 ? ? ? 1_555 B U 19 N3 ? ? A G 5 A U 19 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? hydrog14 hydrog ? ? B A 6 N1 ? ? ? 1_555 B U 18 N3 ? ? A A 6 A U 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? B A 6 N6 ? ? ? 1_555 B U 18 O4 ? ? A A 6 A U 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? B U 7 N3 ? ? ? 1_555 B A 17 N1 ? ? A U 7 A A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? B U 7 O4 ? ? ? 1_555 B A 17 N6 ? ? A U 7 A A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? B U 8 N3 ? ? ? 1_555 B A 17 N1 ? ? A U 8 A A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? B U 8 O4 ? ? ? 1_555 B A 17 N6 ? ? A U 8 A A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? B A 9 N1 ? ? ? 1_555 B U 16 N3 ? ? A A 9 A U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? B A 9 N6 ? ? ? 1_555 B U 16 O4 ? ? A A 9 A U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 47 ? THR A 51 ? ILE B 322 THR B 326 AA1 2 LEU A 58 ? SER A 65 ? LEU B 333 SER B 340 AA1 3 THR A 11 ? GLN A 15 ? THR B 286 GLN B 290 AA1 4 LYS A 90 ? PHE A 93 ? LYS B 365 PHE B 368 AA2 1 GLU A 83 ? PHE A 84 ? GLU B 358 PHE B 359 AA2 2 ASN A 87 ? PRO A 88 ? ASN B 362 PRO B 363 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TYR A 50 ? N TYR B 325 O LYS A 59 ? O LYS B 334 AA1 2 3 O ALA A 62 ? O ALA B 337 N VAL A 14 ? N VAL B 289 AA1 3 4 N PHE A 13 ? N PHE B 288 O SER A 92 ? O SER B 367 AA2 1 2 N PHE A 84 ? N PHE B 359 O ASN A 87 ? O ASN B 362 # _atom_sites.entry_id 6GBM _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 276 276 GLY GLY B . n A 1 2 SER 2 277 277 SER SER B . n A 1 3 HIS 3 278 278 HIS HIS B . n A 1 4 MET 4 279 279 MET MET B . n A 1 5 ASP 5 280 280 ASP ASP B . n A 1 6 ASN 6 281 281 ASN ASN B . n A 1 7 SER 7 282 282 SER SER B . n A 1 8 ASP 8 283 283 ASP ASP B . n A 1 9 ASN 9 284 284 ASN ASN B . n A 1 10 ASN 10 285 285 ASN ASN B . n A 1 11 THR 11 286 286 THR THR B . n A 1 12 ILE 12 287 287 ILE ILE B . n A 1 13 PHE 13 288 288 PHE PHE B . n A 1 14 VAL 14 289 289 VAL VAL B . n A 1 15 GLN 15 290 290 GLN GLN B . n A 1 16 GLY 16 291 291 GLY GLY B . n A 1 17 LEU 17 292 292 LEU LEU B . n A 1 18 GLY 18 293 293 GLY GLY B . n A 1 19 GLU 19 294 294 GLU GLU B . n A 1 20 ASN 20 295 295 ASN ASN B . n A 1 21 VAL 21 296 296 VAL VAL B . n A 1 22 THR 22 297 297 THR THR B . n A 1 23 ILE 23 298 298 ILE ILE B . n A 1 24 GLU 24 299 299 GLU GLU B . n A 1 25 SER 25 300 300 SER SER B . n A 1 26 VAL 26 301 301 VAL VAL B . n A 1 27 ALA 27 302 302 ALA ALA B . n A 1 28 ASP 28 303 303 ASP ASP B . n A 1 29 TYR 29 304 304 TYR TYR B . n A 1 30 PHE 30 305 305 PHE PHE B . n A 1 31 LYS 31 306 306 LYS LYS B . n A 1 32 GLN 32 307 307 GLN GLN B . n A 1 33 ILE 33 308 308 ILE ILE B . n A 1 34 GLY 34 309 309 GLY GLY B . n A 1 35 ILE 35 310 310 ILE ILE B . n A 1 36 ILE 36 311 311 ILE ILE B . n A 1 37 LYS 37 312 312 LYS LYS B . n A 1 38 THR 38 313 313 THR THR B . n A 1 39 ASN 39 314 314 ASN ASN B . n A 1 40 LYS 40 315 315 LYS LYS B . n A 1 41 LYS 41 316 316 LYS LYS B . n A 1 42 THR 42 317 317 THR THR B . n A 1 43 GLY 43 318 318 GLY GLY B . n A 1 44 GLN 44 319 319 GLN GLN B . n A 1 45 PRO 45 320 320 PRO PRO B . n A 1 46 MET 46 321 321 MET MET B . n A 1 47 ILE 47 322 322 ILE ILE B . n A 1 48 ASN 48 323 323 ASN ASN B . n A 1 49 LEU 49 324 324 LEU LEU B . n A 1 50 TYR 50 325 325 TYR TYR B . n A 1 51 THR 51 326 326 THR THR B . n A 1 52 ASP 52 327 327 ASP ASP B . n A 1 53 ARG 53 328 328 ARG ARG B . n A 1 54 GLU 54 329 329 GLU GLU B . n A 1 55 THR 55 330 330 THR THR B . n A 1 56 GLY 56 331 331 GLY GLY B . n A 1 57 LYS 57 332 332 LYS LYS B . n A 1 58 LEU 58 333 333 LEU LEU B . n A 1 59 LYS 59 334 334 LYS LYS B . n A 1 60 GLY 60 335 335 GLY GLY B . n A 1 61 GLU 61 336 336 GLU GLU B . n A 1 62 ALA 62 337 337 ALA ALA B . n A 1 63 THR 63 338 338 THR THR B . n A 1 64 VAL 64 339 339 VAL VAL B . n A 1 65 SER 65 340 340 SER SER B . n A 1 66 PHE 66 341 341 PHE PHE B . n A 1 67 ASP 67 342 342 ASP ASP B . n A 1 68 ASP 68 343 343 ASP ASP B . n A 1 69 PRO 69 344 344 PRO PRO B . n A 1 70 PRO 70 345 345 PRO PRO B . n A 1 71 SER 71 346 346 SER SER B . n A 1 72 ALA 72 347 347 ALA ALA B . n A 1 73 LYS 73 348 348 LYS LYS B . n A 1 74 ALA 74 349 349 ALA ALA B . n A 1 75 ALA 75 350 350 ALA ALA B . n A 1 76 ILE 76 351 351 ILE ILE B . n A 1 77 ASP 77 352 352 ASP ASP B . n A 1 78 TRP 78 353 353 TRP TRP B . n A 1 79 PHE 79 354 354 PHE PHE B . n A 1 80 ASP 80 355 355 ASP ASP B . n A 1 81 GLY 81 356 356 GLY GLY B . n A 1 82 LYS 82 357 357 LYS LYS B . n A 1 83 GLU 83 358 358 GLU GLU B . n A 1 84 PHE 84 359 359 PHE PHE B . n A 1 85 SER 85 360 360 SER SER B . n A 1 86 GLY 86 361 361 GLY GLY B . n A 1 87 ASN 87 362 362 ASN ASN B . n A 1 88 PRO 88 363 363 PRO PRO B . n A 1 89 ILE 89 364 364 ILE ILE B . n A 1 90 LYS 90 365 365 LYS LYS B . n A 1 91 VAL 91 366 366 VAL VAL B . n A 1 92 SER 92 367 367 SER SER B . n A 1 93 PHE 93 368 368 PHE PHE B . n A 1 94 ALA 94 369 369 ALA ALA B . n A 1 95 THR 95 370 370 THR THR B . n A 1 96 ARG 96 371 371 ARG ARG B . n A 1 97 ARG 97 372 372 ARG ARG B . n A 1 98 ALA 98 373 373 ALA ALA B . n A 1 99 ASP 99 374 374 ASP ASP B . n A 1 100 PHE 100 375 375 PHE PHE B . n A 1 101 ASN 101 376 376 ASN ASN B . n A 1 102 ARG 102 377 377 ARG ARG B . n B 2 1 G 1 1 1 G G A . n B 2 2 G 2 2 2 G G A . n B 2 3 C 3 3 3 C C A . n B 2 4 A 4 4 4 A A A . n B 2 5 G 5 5 5 G G A . n B 2 6 A 6 6 6 A A A . n B 2 7 U 7 7 7 U U A . n B 2 8 U 8 8 8 U U A . n B 2 9 A 9 9 9 A A A . n B 2 10 C 10 10 10 C C A . n B 2 11 A 11 11 11 A A A . n B 2 12 A 12 12 12 A A A . n B 2 13 U 13 13 13 U U A . n B 2 14 U 14 14 14 U U A . n B 2 15 C 15 15 15 C C A . n B 2 16 U 16 16 16 U U A . n B 2 17 A 17 17 17 A A A . n B 2 18 U 18 18 18 U U A . n B 2 19 U 19 19 19 U U A . n B 2 20 U 20 20 20 U U A . n B 2 21 G 21 21 21 G G A . n B 2 22 C 22 22 22 C C A . n B 2 23 C 23 23 23 C C A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2240 ? 1 MORE -14 ? 1 'SSA (A^2)' 9490 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-02-20 2 'Structure model' 1 1 2019-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Data collection' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category pdbx_nmr_software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 2 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_pdbx_nmr_software.name' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 FUS-RRM 0.8 ? mM '[U-99% 13C; U-99% 15N]' 1 'RNA stem loop' 0.8 ? mM '[U-99% 15N]' 1 'sodium phosphate' 20 ? mM 'natural abundance' 1 beta-mercaptoethanol 1 ? mM 'natural abundance' 2 FUS-RRM 0.8 ? mM '[U-99% 13C; U-99% 15N]' 2 'stem-loop RNA' 0.8 ? mM '[U-99% 15N]' 2 'sodium phosphate' 20 ? mM 'natural abundance' 2 beta-mercaptoethanol 1 ? mM 'natural abundance' 3 FUS-RRM 1 ? mM '[U-99% 15N]' 3 'stem-loop RNA' 0.8 ? mM '[U-99% 13C; U-99% 15N]' 3 'sodium phosphate' 20 ? mM 'natural abundance' 3 beta-mercaptoethanol 1 ? mM 'natural abundance' 4 FUS-RRM 1.0 ? mM '[U-99% 15N]' 4 'stem-loop RNA' 0.8 ? mM '[U-99% 13C; U-99% 15N]' 4 'sodium phosphate' 20 ? mM 'natural abundance' 4 beta-mercaptoethanol 1 ? mM 'natural abundance' 5 FUS-RRM 1.0 ? mM '[U-99% 15N]' 5 'stem-loop RNA' 1.0 ? mM '[U-99% 15N]' 5 'sodium phosphate' 20 ? mM 'natural abundance' 5 beta-mercaptoethanol 1 ? mM 'natural abundance' # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 15 _pdbx_validate_close_contact.auth_atom_id_1 "HO2'" _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 A _pdbx_validate_close_contact.auth_seq_id_1 12 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 "O4'" _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 U _pdbx_validate_close_contact.auth_seq_id_2 13 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.59 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 11 "O4'" A U 13 ? ? "C1'" A U 13 ? ? N1 A U 13 ? ? 113.18 108.50 4.68 0.70 N 2 16 "O4'" A A 12 ? ? "C1'" A A 12 ? ? N9 A A 12 ? ? 112.71 108.50 4.21 0.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP B 355 ? ? -52.27 108.23 2 1 SER B 360 ? ? 53.99 19.28 3 1 THR B 370 ? ? -144.56 -154.81 4 2 LYS B 332 ? ? -70.28 -108.79 5 2 ASP B 355 ? ? -52.29 108.50 6 2 SER B 360 ? ? 55.49 17.13 7 2 THR B 370 ? ? -147.65 -155.01 8 3 ASN B 281 ? ? -91.34 31.79 9 3 SER B 360 ? ? 53.31 19.50 10 3 THR B 370 ? ? -148.30 -155.93 11 4 ASN B 281 ? ? -84.61 39.70 12 4 ASN B 295 ? ? -141.22 24.40 13 4 LYS B 332 ? ? -74.60 -101.62 14 4 ASP B 355 ? ? -49.19 109.68 15 4 SER B 360 ? ? 54.36 19.00 16 4 THR B 370 ? ? -134.45 -155.77 17 5 HIS B 278 ? ? 59.58 12.50 18 5 ASP B 280 ? ? 51.74 17.68 19 5 ASP B 283 ? ? -143.22 26.90 20 5 LYS B 332 ? ? -72.94 -107.03 21 5 ASP B 355 ? ? -53.08 107.71 22 5 SER B 360 ? ? 53.14 18.87 23 5 ARG B 371 ? ? -51.27 102.28 24 6 LYS B 332 ? ? -72.75 -111.05 25 6 ASP B 355 ? ? -51.92 109.52 26 6 SER B 360 ? ? 54.11 18.77 27 6 THR B 370 ? ? -147.68 -154.04 28 6 PHE B 375 ? ? -140.95 -26.41 29 7 SER B 360 ? ? 55.19 17.69 30 7 THR B 370 ? ? -138.41 -158.91 31 8 ASP B 355 ? ? -52.28 109.30 32 8 THR B 370 ? ? -142.16 -130.95 33 8 ARG B 372 ? ? 60.76 -39.17 34 9 ASP B 280 ? ? 60.95 150.46 35 9 LYS B 332 ? ? -73.56 -114.33 36 9 ASP B 355 ? ? -50.38 109.23 37 9 SER B 360 ? ? 55.24 17.94 38 9 ARG B 371 ? ? -108.70 70.23 39 9 ASN B 376 ? ? -141.58 -9.25 40 10 LYS B 332 ? ? -73.44 -100.62 41 10 SER B 360 ? ? 53.91 18.96 42 10 THR B 370 ? ? -146.53 -152.57 43 11 ASN B 281 ? ? -78.63 23.59 44 12 SER B 277 ? ? -150.26 10.52 45 12 HIS B 278 ? ? 57.20 -178.86 46 12 SER B 360 ? ? 54.19 18.51 47 12 THR B 370 ? ? -139.63 -157.10 48 13 LYS B 332 ? ? -75.12 -103.45 49 13 SER B 360 ? ? 55.32 17.29 50 13 ARG B 371 ? ? -108.11 75.66 51 14 SER B 277 ? ? 61.11 162.96 52 14 MET B 279 ? ? 58.55 179.88 53 14 ASN B 281 ? ? -146.39 25.69 54 14 LYS B 332 ? ? -75.36 -96.37 55 14 ASP B 355 ? ? -48.35 109.43 56 14 SER B 360 ? ? 54.45 18.77 57 14 THR B 370 ? ? -148.32 -158.68 58 14 ARG B 372 ? ? 60.71 -28.39 59 15 SER B 277 ? ? -151.27 15.51 60 15 MET B 279 ? ? 62.45 152.58 61 15 ASP B 280 ? ? 53.16 88.55 62 15 ASP B 355 ? ? -48.49 108.40 63 15 SER B 360 ? ? 53.35 19.48 64 15 THR B 370 ? ? -144.02 -155.37 65 15 ARG B 371 ? ? -118.63 66.56 66 16 ASP B 355 ? ? -55.46 108.04 67 16 SER B 360 ? ? 54.90 16.15 68 16 THR B 370 ? ? -147.69 -159.18 69 17 ASP B 355 ? ? -49.22 109.16 70 17 SER B 360 ? ? 54.89 18.11 71 17 THR B 370 ? ? -148.13 -156.01 72 18 LYS B 332 ? ? -73.75 -108.42 73 18 ASP B 355 ? ? -49.18 108.43 74 18 SER B 360 ? ? 54.73 18.31 75 18 THR B 370 ? ? -143.19 -146.52 76 19 SER B 282 ? ? -69.39 0.63 77 19 LYS B 332 ? ? -76.76 -107.16 78 19 ASP B 355 ? ? -45.86 107.51 79 19 SER B 360 ? ? 54.71 19.65 80 20 SER B 360 ? ? 52.73 19.53 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 12 _pdbx_validate_planes.auth_comp_id U _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 13 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.064 _pdbx_validate_planes.type 'SIDE CHAIN' # _ndb_struct_conf_na.entry_id 6GBM _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B G 1 1_555 B C 23 1_555 -0.191 -0.122 -0.253 2.250 -8.363 -0.364 1 A_G1:C23_A A 1 ? A 23 ? 19 1 1 B G 2 1_555 B C 22 1_555 -0.270 -0.004 0.351 18.249 -1.195 -0.355 2 A_G2:C22_A A 2 ? A 22 ? 19 1 1 B C 3 1_555 B G 21 1_555 0.137 -0.036 -0.485 16.035 -8.867 -0.242 3 A_C3:G21_A A 3 ? A 21 ? 19 1 1 B A 4 1_555 B U 20 1_555 -0.041 -0.081 -0.195 6.140 -6.366 0.245 4 A_A4:U20_A A 4 ? A 20 ? 20 1 1 B G 5 1_555 B U 19 1_555 -2.263 -0.338 -0.047 2.737 -9.162 7.128 5 A_G5:U19_A A 5 ? A 19 ? 28 1 1 B A 6 1_555 B U 18 1_555 0.175 -0.019 -0.245 -5.927 -12.902 -1.512 6 A_A6:U18_A A 6 ? A 18 ? 20 1 1 B U 7 1_555 B A 17 1_555 0.127 0.073 -0.156 -11.343 -7.255 -11.928 7 A_U7:A17_A A 7 ? A 17 ? 20 1 1 B A 9 1_555 B U 16 1_555 0.057 0.001 -0.710 -6.448 -12.435 -1.290 8 A_A9:U16_A A 9 ? A 16 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B G 1 1_555 B C 23 1_555 B G 2 1_555 B C 22 1_555 0.446 -0.973 3.059 -4.418 12.585 27.107 -4.086 -1.634 2.293 25.019 8.782 30.156 1 AA_G1G2:C22C23_AA A 1 ? A 23 ? A 2 ? A 22 ? 1 B G 2 1_555 B C 22 1_555 B C 3 1_555 B G 21 1_555 -0.157 -1.286 3.458 5.185 17.911 31.844 -4.384 0.929 2.376 29.680 -8.592 36.779 2 AA_G2C3:G21C22_AA A 2 ? A 22 ? A 3 ? A 21 ? 1 B C 3 1_555 B G 21 1_555 B A 4 1_555 B U 20 1_555 -0.059 -1.343 3.619 -1.218 21.495 29.739 -5.066 -0.071 2.190 36.476 2.067 36.571 3 AA_C3A4:U20G21_AA A 3 ? A 21 ? A 4 ? A 20 ? 1 B A 4 1_555 B U 20 1_555 B G 5 1_555 B U 19 1_555 0.928 -1.947 3.257 -2.636 10.000 23.196 -6.923 -2.770 2.130 23.433 6.178 25.368 4 AA_A4G5:U19U20_AA A 4 ? A 20 ? A 5 ? A 19 ? 1 B G 5 1_555 B U 19 1_555 B A 6 1_555 B U 18 1_555 -0.488 -1.682 3.596 -0.732 6.375 40.599 -3.133 0.611 3.313 9.119 1.047 41.082 5 AA_G5A6:U18U19_AA A 5 ? A 19 ? A 6 ? A 18 ? 1 B A 6 1_555 B U 18 1_555 B U 7 1_555 B A 17 1_555 -0.502 -2.243 3.453 2.772 2.251 32.590 -4.373 1.378 3.243 3.996 -4.922 32.780 6 AA_A6U7:A17U18_AA A 6 ? A 18 ? A 7 ? A 17 ? 1 B U 7 1_555 B A 17 1_555 B A 9 1_555 B U 16 1_555 -1.443 -1.774 5.203 25.731 8.616 44.861 -2.860 4.148 3.569 10.260 -30.640 52.064 7 AA_U7A9:U16A17_AA A 7 ? A 17 ? A 9 ? A 16 ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'isothermal titration calorimetry' _pdbx_struct_assembly_auth_evidence.details ? #