data_6GE1 # _entry.id 6GE1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6GE1 pdb_00006ge1 10.2210/pdb6ge1/pdb WWPDB D_1200009177 ? ? BMRB 34265 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution structure of the r(UGGUGGU)4 RNA quadruplex' _pdbx_database_related.db_id 34265 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6GE1 _pdbx_database_status.recvd_initial_deposition_date 2018-04-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Andralojc, W.' 1 ? 'Gdaniec, Z.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev RNA _citation.journal_id_ASTM RNARFU _citation.journal_id_CSD 2122 _citation.journal_id_ISSN 1469-9001 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 25 _citation.language ? _citation.page_first 121 _citation.page_last 134 _citation.title ;Unraveling the structural basis for the exceptional stability of RNA G-quadruplexes capped by a uridine tetrad at the 3' terminus. ; _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1261/rna.068163.118 _citation.pdbx_database_id_PubMed 30341177 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Andralojc, W.' 1 ? primary 'Malgowska, M.' 2 ? primary 'Sarzynska, J.' 3 ? primary 'Pasternak, K.' 4 ? primary 'Szpotkowski, K.' 5 ? primary 'Kierzek, R.' 6 ? primary 'Gdaniec, Z.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;RNA (5'-R(*UP*GP*GP*UP*GP*GP*U)-3') ; _entity.formula_weight 2254.363 _entity.pdbx_number_of_molecules 4 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code UGGUGGU _entity_poly.pdbx_seq_one_letter_code_can UGGUGGU _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 U n 1 2 G n 1 3 G n 1 4 U n 1 5 G n 1 6 G n 1 7 U n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 7 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6GE1 _struct_ref.pdbx_db_accession 6GE1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6GE1 A 1 ? 7 ? 6GE1 1 ? 7 ? 1 7 2 1 6GE1 B 1 ? 7 ? 6GE1 1 ? 7 ? 1 7 3 1 6GE1 C 1 ? 7 ? 6GE1 1 ? 7 ? 1 7 4 1 6GE1 D 1 ? 7 ? 6GE1 1 ? 7 ? 1 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H NOESY' 1 isotropic 2 3 1 '2D 1H-1H NOESY' 1 isotropic 3 2 2 '2D 1H-1H NOESY' 1 isotropic 4 2 2 '2D 1H-1H TOCSY' 1 isotropic 5 3 1 '2D 1H-13C HSQC' 1 isotropic 6 3 1 '2D 1H-31P COSY' 1 isotropic # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 298 atm 1 6.8 0.06 ? ? M 25C ? pH ? ? K 2 278 atm 1 6.8 0.06 ? ? M 5C ? pH ? ? K 3 333 bar 1 6.8 0.06 ? ? M 55C ? pH ? ? K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '2.0 mM pUGGUGGU, 10 mM phosphate buffer, 50 mM potassium chloride, 100% D2O' '100% D2O' UGG_KCl_D2O solution ? 2 '2.0 mM pUGGUGGU, 10 mM phosphate buffer, 0.05 mM potassium chloride, 90% H2O/10% D2O' '90% H2O/10% D2O' UGG_KCl_H2O solution ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.details ? # loop_ _pdbx_nmr_refine.entry_id _pdbx_nmr_refine.method _pdbx_nmr_refine.details _pdbx_nmr_refine.software_ordinal 6GE1 'molecular dynamics' ? 1 6GE1 'simulated annealing' ? 2 # _pdbx_nmr_ensemble.entry_id 6GE1 _pdbx_nmr_ensemble.conformers_calculated_total_number 400 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6GE1 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 2 'structure calculation' Xplor-NIH ? 'Schwieters, Kuszewski, Tjandra and Clore' 3 'chemical shift assignment' Sparky ? Goddard 4 'peak picking' Sparky ? Goddard # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6GE1 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6GE1 _struct.title 'Solution structure of the r(UGGUGGU)4 RNA quadruplex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6GE1 _struct_keywords.text 'quadruplex, tetramolecular, parallel stranded, U-tetrad, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A U 1 O4 ? ? ? 1_555 B U 1 N3 ? ? A U 1 B U 1 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog2 hydrog ? ? A U 1 N3 ? ? ? 1_555 D U 1 O4 ? ? A U 1 D U 1 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog3 hydrog ? ? A G 2 N7 ? ? ? 1_555 B G 2 N2 ? ? A G 2 B G 2 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A G 2 O6 ? ? ? 1_555 B G 2 N1 ? ? A G 2 B G 2 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A G 2 N1 ? ? ? 1_555 D G 2 O6 ? ? A G 2 D G 2 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A G 2 N2 ? ? ? 1_555 D G 2 N7 ? ? A G 2 D G 2 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A G 3 N7 ? ? ? 1_555 B G 3 N2 ? ? A G 3 B G 3 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A G 3 O6 ? ? ? 1_555 B G 3 N1 ? ? A G 3 B G 3 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A G 3 N1 ? ? ? 1_555 D G 3 O6 ? ? A G 3 D G 3 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A G 3 N2 ? ? ? 1_555 D G 3 N7 ? ? A G 3 D G 3 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A U 4 O4 ? ? ? 1_555 B U 4 N3 ? ? A U 4 B U 4 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog12 hydrog ? ? A U 4 N3 ? ? ? 1_555 D U 4 O4 ? ? A U 4 D U 4 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog13 hydrog ? ? A G 5 N7 ? ? ? 1_555 B G 5 N2 ? ? A G 5 B G 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A G 5 O6 ? ? ? 1_555 B G 5 N1 ? ? A G 5 B G 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A G 5 N1 ? ? ? 1_555 D G 5 O6 ? ? A G 5 D G 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A G 5 N2 ? ? ? 1_555 D G 5 N7 ? ? A G 5 D G 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A G 6 N7 ? ? ? 1_555 B G 6 N2 ? ? A G 6 B G 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A G 6 O6 ? ? ? 1_555 B G 6 N1 ? ? A G 6 B G 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A G 6 N1 ? ? ? 1_555 D G 6 O6 ? ? A G 6 D G 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A G 6 N2 ? ? ? 1_555 D G 6 N7 ? ? A G 6 D G 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A U 7 N3 ? ? ? 1_555 B U 7 O4 ? ? A U 7 B U 7 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog22 hydrog ? ? A U 7 O4 ? ? ? 1_555 D U 7 N3 ? ? A U 7 D U 7 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog23 hydrog ? ? B U 1 O4 ? ? ? 1_555 C U 1 N3 ? ? B U 1 C U 1 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog24 hydrog ? ? B U 1 O4 ? ? ? 1_555 C G 2 N1 ? ? B U 1 C G 2 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog25 hydrog ? ? B G 2 N7 ? ? ? 1_555 C G 2 N2 ? ? B G 2 C G 2 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? B G 2 O6 ? ? ? 1_555 C G 2 N1 ? ? B G 2 C G 2 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? B G 3 N7 ? ? ? 1_555 C G 3 N2 ? ? B G 3 C G 3 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? B G 3 O6 ? ? ? 1_555 C G 3 N1 ? ? B G 3 C G 3 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? B U 4 O4 ? ? ? 1_555 C U 4 N3 ? ? B U 4 C U 4 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog30 hydrog ? ? B G 5 N7 ? ? ? 1_555 C G 5 N2 ? ? B G 5 C G 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog31 hydrog ? ? B G 5 O6 ? ? ? 1_555 C G 5 N1 ? ? B G 5 C G 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog32 hydrog ? ? B G 6 N7 ? ? ? 1_555 C G 6 N2 ? ? B G 6 C G 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog33 hydrog ? ? B G 6 O6 ? ? ? 1_555 C G 6 N1 ? ? B G 6 C G 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog34 hydrog ? ? B U 7 N3 ? ? ? 1_555 C U 7 O4 ? ? B U 7 C U 7 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog35 hydrog ? ? C U 1 O4 ? ? ? 1_555 D U 1 N3 ? ? C U 1 D U 1 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog36 hydrog ? ? C G 2 N7 ? ? ? 1_555 D G 2 N2 ? ? C G 2 D G 2 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog37 hydrog ? ? C G 2 O6 ? ? ? 1_555 D G 2 N1 ? ? C G 2 D G 2 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog38 hydrog ? ? C G 3 N7 ? ? ? 1_555 D G 3 N2 ? ? C G 3 D G 3 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog39 hydrog ? ? C G 3 O6 ? ? ? 1_555 D G 3 N1 ? ? C G 3 D G 3 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog40 hydrog ? ? C U 4 O4 ? ? ? 1_555 D U 4 N3 ? ? C U 4 D U 4 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog41 hydrog ? ? C G 5 N7 ? ? ? 1_555 D G 5 N2 ? ? C G 5 D G 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog42 hydrog ? ? C G 5 O6 ? ? ? 1_555 D G 5 N1 ? ? C G 5 D G 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog43 hydrog ? ? C G 6 N7 ? ? ? 1_555 D G 6 N2 ? ? C G 6 D G 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog44 hydrog ? ? C G 6 O6 ? ? ? 1_555 D G 6 N1 ? ? C G 6 D G 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog45 hydrog ? ? C U 7 N3 ? ? ? 1_555 D U 7 O4 ? ? C U 7 D U 7 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 6GE1 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 U 1 1 1 U U A . n A 1 2 G 2 2 2 G G A . n A 1 3 G 3 3 3 G G A . n A 1 4 U 4 4 4 U U A . n A 1 5 G 5 5 5 G G A . n A 1 6 G 6 6 6 G G A . n A 1 7 U 7 7 7 U U A . n B 1 1 U 1 1 1 U U B . n B 1 2 G 2 2 2 G G B . n B 1 3 G 3 3 3 G G B . n B 1 4 U 4 4 4 U U B . n B 1 5 G 5 5 5 G G B . n B 1 6 G 6 6 6 G G B . n B 1 7 U 7 7 7 U U B . n C 1 1 U 1 1 1 U U C . n C 1 2 G 2 2 2 G G C . n C 1 3 G 3 3 3 G G C . n C 1 4 U 4 4 4 U U C . n C 1 5 G 5 5 5 G G C . n C 1 6 G 6 6 6 G G C . n C 1 7 U 7 7 7 U U C . n D 1 1 U 1 1 1 U U D . n D 1 2 G 2 2 2 G G D . n D 1 3 G 3 3 3 G G D . n D 1 4 U 4 4 4 U U D . n D 1 5 G 5 5 5 G G D . n D 1 6 G 6 6 6 G G D . n D 1 7 U 7 7 7 U U D . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3150 ? 1 MORE -62 ? 1 'SSA (A^2)' 3750 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-10-31 2 'Structure model' 1 1 2018-12-26 3 'Structure model' 1 2 2019-05-08 4 'Structure model' 1 3 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' pdbx_database_proc 4 3 'Structure model' pdbx_nmr_software 5 4 'Structure model' database_2 6 4 'Structure model' pdbx_database_status 7 4 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.year' 5 2 'Structure model' '_citation_author.identifier_ORCID' 6 3 'Structure model' '_pdbx_nmr_software.name' 7 4 'Structure model' '_database_2.pdbx_DOI' 8 4 'Structure model' '_database_2.pdbx_database_accession' 9 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' 10 4 'Structure model' '_pdbx_nmr_spectrometer.model' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 pUGGUGGU 2.0 ? mM 'natural abundance' 1 'phosphate buffer' 10 ? mM 'natural abundance' 1 'potassium chloride' 50 ? mM 'natural abundance' 2 pUGGUGGU 2.0 ? mM 'natural abundance' 2 'phosphate buffer' 10 ? mM 'natural abundance' 2 'potassium chloride' 0.05 ? mM 'natural abundance' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 "HO2'" A G 2 ? ? OP2 A G 3 ? ? 1.56 2 2 OP2 D G 6 ? ? "HO2'" D U 7 ? ? 1.56 3 4 OP2 B G 6 ? ? "HO2'" B U 7 ? ? 1.58 4 4 OP2 D G 6 ? ? "HO2'" D U 7 ? ? 1.59 5 5 "HO2'" B G 2 ? ? OP2 B G 3 ? ? 1.56 6 5 OP2 B G 6 ? ? "HO2'" B U 7 ? ? 1.59 7 6 "HO2'" A G 2 ? ? OP2 A G 3 ? ? 1.59 8 8 OP2 B G 6 ? ? "HO2'" B U 7 ? ? 1.58 9 9 OP2 B G 6 ? ? "HO2'" B U 7 ? ? 1.59 10 11 OP2 C G 6 ? ? "HO2'" C U 7 ? ? 1.58 11 13 OP2 D G 6 ? ? "HO2'" D U 7 ? ? 1.58 12 14 OP2 A G 6 ? ? "HO2'" A U 7 ? ? 1.58 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A G 2 ? ? "C1'" A G 2 ? ? N9 A G 2 ? ? 112.98 108.50 4.48 0.70 N 2 1 "O4'" A U 7 ? ? "C1'" A U 7 ? ? N1 A U 7 ? ? 112.76 108.50 4.26 0.70 N 3 1 "O4'" B G 2 ? ? "C1'" B G 2 ? ? N9 B G 2 ? ? 113.12 108.50 4.62 0.70 N 4 1 "O4'" D U 4 ? ? "C1'" D U 4 ? ? N1 D U 4 ? ? 113.35 108.50 4.85 0.70 N 5 3 "O4'" C U 7 ? ? "C1'" C U 7 ? ? N1 C U 7 ? ? 112.75 108.50 4.25 0.70 N 6 4 "O4'" A G 2 ? ? "C1'" A G 2 ? ? N9 A G 2 ? ? 113.26 108.50 4.76 0.70 N 7 4 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 112.82 108.50 4.32 0.70 N 8 4 "O4'" B G 2 ? ? "C1'" B G 2 ? ? N9 B G 2 ? ? 113.16 108.50 4.66 0.70 N 9 4 "O4'" B U 4 ? ? "C1'" B U 4 ? ? N1 B U 4 ? ? 112.74 108.50 4.24 0.70 N 10 5 "O4'" A G 2 ? ? "C1'" A G 2 ? ? N9 A G 2 ? ? 113.88 108.50 5.38 0.70 N 11 5 "O4'" B G 2 ? ? "C1'" B G 2 ? ? N9 B G 2 ? ? 115.07 108.50 6.57 0.70 N 12 5 "O4'" C G 2 ? ? "C1'" C G 2 ? ? N9 C G 2 ? ? 112.75 108.50 4.25 0.70 N 13 6 "O4'" C U 4 ? ? "C1'" C U 4 ? ? N1 C U 4 ? ? 112.79 108.50 4.29 0.70 N 14 6 "O4'" D U 7 ? ? "C1'" D U 7 ? ? N1 D U 7 ? ? 113.49 108.50 4.99 0.70 N 15 7 "O4'" D G 2 ? ? "C1'" D G 2 ? ? N9 D G 2 ? ? 112.72 108.50 4.22 0.70 N 16 8 "O4'" A G 2 ? ? "C1'" A G 2 ? ? N9 A G 2 ? ? 115.75 108.50 7.25 0.70 N 17 8 "O4'" A U 4 ? ? "C1'" A U 4 ? ? N1 A U 4 ? ? 114.19 108.50 5.69 0.70 N 18 8 "O4'" C G 2 ? ? "C1'" C G 2 ? ? N9 C G 2 ? ? 113.08 108.50 4.58 0.70 N 19 8 "O4'" D G 2 ? ? "C1'" D G 2 ? ? N9 D G 2 ? ? 113.10 108.50 4.60 0.70 N 20 9 "O4'" C G 2 ? ? "C1'" C G 2 ? ? N9 C G 2 ? ? 112.94 108.50 4.44 0.70 N 21 10 "O4'" A G 2 ? ? "C1'" A G 2 ? ? N9 A G 2 ? ? 112.77 108.50 4.27 0.70 N 22 10 "O4'" C G 2 ? ? "C1'" C G 2 ? ? N9 C G 2 ? ? 115.08 108.50 6.58 0.70 N 23 10 "O4'" D G 2 ? ? "C1'" D G 2 ? ? N9 D G 2 ? ? 112.96 108.50 4.46 0.70 N 24 10 "O4'" D U 7 ? ? "C1'" D U 7 ? ? N1 D U 7 ? ? 113.09 108.50 4.59 0.70 N 25 12 "O4'" D U 4 ? ? "C1'" D U 4 ? ? N1 D U 4 ? ? 113.20 108.50 4.70 0.70 N 26 13 "O4'" C G 2 ? ? "C1'" C G 2 ? ? N9 C G 2 ? ? 112.73 108.50 4.23 0.70 N 27 14 "O4'" C U 4 ? ? "C1'" C U 4 ? ? N1 C U 4 ? ? 112.71 108.50 4.21 0.70 N 28 14 "O4'" C U 7 ? ? "C1'" C U 7 ? ? N1 C U 7 ? ? 113.00 108.50 4.50 0.70 N 29 14 "O4'" D G 2 ? ? "C1'" D G 2 ? ? N9 D G 2 ? ? 113.23 108.50 4.73 0.70 N 30 15 "O4'" A G 2 ? ? "C1'" A G 2 ? ? N9 A G 2 ? ? 112.79 108.50 4.29 0.70 N 31 15 N3 B G 2 ? ? C2 B G 2 ? ? N2 B G 2 ? ? 115.42 119.90 -4.48 0.70 N 32 15 "O4'" D G 2 ? ? "C1'" D G 2 ? ? N9 D G 2 ? ? 113.09 108.50 4.59 0.70 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 G A 2 ? ? 0.109 'SIDE CHAIN' 2 1 G A 3 ? ? 0.083 'SIDE CHAIN' 3 1 U A 7 ? ? 0.100 'SIDE CHAIN' 4 1 G B 2 ? ? 0.101 'SIDE CHAIN' 5 1 G B 5 ? ? 0.089 'SIDE CHAIN' 6 1 G C 2 ? ? 0.083 'SIDE CHAIN' 7 1 G C 3 ? ? 0.070 'SIDE CHAIN' 8 1 G C 5 ? ? 0.087 'SIDE CHAIN' 9 1 G D 2 ? ? 0.123 'SIDE CHAIN' 10 1 G D 3 ? ? 0.099 'SIDE CHAIN' 11 1 G D 5 ? ? 0.078 'SIDE CHAIN' 12 1 U D 7 ? ? 0.076 'SIDE CHAIN' 13 2 U A 1 ? ? 0.064 'SIDE CHAIN' 14 2 G A 2 ? ? 0.105 'SIDE CHAIN' 15 2 G A 3 ? ? 0.074 'SIDE CHAIN' 16 2 G A 5 ? ? 0.105 'SIDE CHAIN' 17 2 G A 6 ? ? 0.064 'SIDE CHAIN' 18 2 G B 2 ? ? 0.083 'SIDE CHAIN' 19 2 G B 3 ? ? 0.084 'SIDE CHAIN' 20 2 G B 5 ? ? 0.072 'SIDE CHAIN' 21 2 G C 2 ? ? 0.105 'SIDE CHAIN' 22 2 U C 4 ? ? 0.061 'SIDE CHAIN' 23 2 G D 2 ? ? 0.080 'SIDE CHAIN' 24 2 G D 3 ? ? 0.078 'SIDE CHAIN' 25 2 U D 4 ? ? 0.080 'SIDE CHAIN' 26 2 G D 5 ? ? 0.105 'SIDE CHAIN' 27 3 U A 1 ? ? 0.064 'SIDE CHAIN' 28 3 G A 2 ? ? 0.136 'SIDE CHAIN' 29 3 G A 3 ? ? 0.060 'SIDE CHAIN' 30 3 G A 5 ? ? 0.092 'SIDE CHAIN' 31 3 G B 2 ? ? 0.110 'SIDE CHAIN' 32 3 G B 5 ? ? 0.060 'SIDE CHAIN' 33 3 G C 2 ? ? 0.090 'SIDE CHAIN' 34 3 G C 3 ? ? 0.079 'SIDE CHAIN' 35 3 G C 5 ? ? 0.090 'SIDE CHAIN' 36 3 G D 2 ? ? 0.102 'SIDE CHAIN' 37 3 G D 3 ? ? 0.070 'SIDE CHAIN' 38 3 G D 5 ? ? 0.082 'SIDE CHAIN' 39 4 U A 1 ? ? 0.066 'SIDE CHAIN' 40 4 G A 2 ? ? 0.095 'SIDE CHAIN' 41 4 G A 3 ? ? 0.058 'SIDE CHAIN' 42 4 G A 5 ? ? 0.099 'SIDE CHAIN' 43 4 U A 7 ? ? 0.077 'SIDE CHAIN' 44 4 U B 1 ? ? 0.064 'SIDE CHAIN' 45 4 G B 2 ? ? 0.095 'SIDE CHAIN' 46 4 G B 3 ? ? 0.064 'SIDE CHAIN' 47 4 G B 5 ? ? 0.073 'SIDE CHAIN' 48 4 G B 6 ? ? 0.055 'SIDE CHAIN' 49 4 G C 2 ? ? 0.104 'SIDE CHAIN' 50 4 G C 5 ? ? 0.076 'SIDE CHAIN' 51 4 G D 2 ? ? 0.107 'SIDE CHAIN' 52 4 G D 3 ? ? 0.064 'SIDE CHAIN' 53 4 G D 5 ? ? 0.080 'SIDE CHAIN' 54 5 G A 2 ? ? 0.101 'SIDE CHAIN' 55 5 G A 3 ? ? 0.083 'SIDE CHAIN' 56 5 G A 5 ? ? 0.105 'SIDE CHAIN' 57 5 G B 2 ? ? 0.109 'SIDE CHAIN' 58 5 G B 3 ? ? 0.081 'SIDE CHAIN' 59 5 G B 5 ? ? 0.109 'SIDE CHAIN' 60 5 U B 7 ? ? 0.082 'SIDE CHAIN' 61 5 G C 2 ? ? 0.110 'SIDE CHAIN' 62 5 G C 3 ? ? 0.060 'SIDE CHAIN' 63 5 G C 5 ? ? 0.088 'SIDE CHAIN' 64 5 G D 2 ? ? 0.123 'SIDE CHAIN' 65 5 G D 3 ? ? 0.053 'SIDE CHAIN' 66 5 G D 5 ? ? 0.109 'SIDE CHAIN' 67 6 G A 2 ? ? 0.107 'SIDE CHAIN' 68 6 G A 3 ? ? 0.077 'SIDE CHAIN' 69 6 G A 5 ? ? 0.107 'SIDE CHAIN' 70 6 U A 7 ? ? 0.075 'SIDE CHAIN' 71 6 G B 2 ? ? 0.080 'SIDE CHAIN' 72 6 G B 3 ? ? 0.074 'SIDE CHAIN' 73 6 G B 5 ? ? 0.091 'SIDE CHAIN' 74 6 G C 2 ? ? 0.115 'SIDE CHAIN' 75 6 G C 3 ? ? 0.061 'SIDE CHAIN' 76 6 G C 5 ? ? 0.086 'SIDE CHAIN' 77 6 G D 2 ? ? 0.091 'SIDE CHAIN' 78 6 G D 3 ? ? 0.088 'SIDE CHAIN' 79 6 G D 5 ? ? 0.117 'SIDE CHAIN' 80 7 G A 2 ? ? 0.097 'SIDE CHAIN' 81 7 G A 3 ? ? 0.069 'SIDE CHAIN' 82 7 U A 7 ? ? 0.068 'SIDE CHAIN' 83 7 G B 2 ? ? 0.104 'SIDE CHAIN' 84 7 G B 3 ? ? 0.056 'SIDE CHAIN' 85 7 G B 5 ? ? 0.118 'SIDE CHAIN' 86 7 G C 2 ? ? 0.100 'SIDE CHAIN' 87 7 G D 2 ? ? 0.109 'SIDE CHAIN' 88 7 G D 3 ? ? 0.086 'SIDE CHAIN' 89 7 G D 5 ? ? 0.119 'SIDE CHAIN' 90 8 G A 2 ? ? 0.159 'SIDE CHAIN' 91 8 G A 3 ? ? 0.059 'SIDE CHAIN' 92 8 G A 5 ? ? 0.139 'SIDE CHAIN' 93 8 G B 2 ? ? 0.108 'SIDE CHAIN' 94 8 G B 3 ? ? 0.093 'SIDE CHAIN' 95 8 G B 5 ? ? 0.086 'SIDE CHAIN' 96 8 G C 2 ? ? 0.143 'SIDE CHAIN' 97 8 G C 3 ? ? 0.108 'SIDE CHAIN' 98 8 G C 5 ? ? 0.105 'SIDE CHAIN' 99 8 G D 2 ? ? 0.142 'SIDE CHAIN' 100 8 G D 3 ? ? 0.081 'SIDE CHAIN' 101 8 G D 5 ? ? 0.125 'SIDE CHAIN' 102 9 G A 2 ? ? 0.109 'SIDE CHAIN' 103 9 G A 3 ? ? 0.052 'SIDE CHAIN' 104 9 G A 5 ? ? 0.085 'SIDE CHAIN' 105 9 G B 2 ? ? 0.105 'SIDE CHAIN' 106 9 G B 3 ? ? 0.077 'SIDE CHAIN' 107 9 G B 5 ? ? 0.098 'SIDE CHAIN' 108 9 U C 1 ? ? 0.080 'SIDE CHAIN' 109 9 G C 2 ? ? 0.104 'SIDE CHAIN' 110 9 G C 5 ? ? 0.093 'SIDE CHAIN' 111 9 G D 2 ? ? 0.096 'SIDE CHAIN' 112 9 G D 3 ? ? 0.082 'SIDE CHAIN' 113 9 G D 5 ? ? 0.090 'SIDE CHAIN' 114 10 G A 2 ? ? 0.100 'SIDE CHAIN' 115 10 G A 5 ? ? 0.110 'SIDE CHAIN' 116 10 G B 2 ? ? 0.099 'SIDE CHAIN' 117 10 G B 3 ? ? 0.093 'SIDE CHAIN' 118 10 U B 4 ? ? 0.056 'SIDE CHAIN' 119 10 U C 1 ? ? 0.058 'SIDE CHAIN' 120 10 G C 2 ? ? 0.117 'SIDE CHAIN' 121 10 G C 3 ? ? 0.083 'SIDE CHAIN' 122 10 G C 5 ? ? 0.070 'SIDE CHAIN' 123 10 G D 2 ? ? 0.099 'SIDE CHAIN' 124 10 G D 3 ? ? 0.072 'SIDE CHAIN' 125 10 G D 5 ? ? 0.100 'SIDE CHAIN' 126 10 U D 7 ? ? 0.064 'SIDE CHAIN' 127 11 G A 2 ? ? 0.095 'SIDE CHAIN' 128 11 G A 3 ? ? 0.086 'SIDE CHAIN' 129 11 G A 5 ? ? 0.116 'SIDE CHAIN' 130 11 G B 2 ? ? 0.117 'SIDE CHAIN' 131 11 G B 5 ? ? 0.104 'SIDE CHAIN' 132 11 U B 7 ? ? 0.065 'SIDE CHAIN' 133 11 U C 1 ? ? 0.095 'SIDE CHAIN' 134 11 G C 2 ? ? 0.097 'SIDE CHAIN' 135 11 G C 5 ? ? 0.113 'SIDE CHAIN' 136 11 G D 2 ? ? 0.069 'SIDE CHAIN' 137 11 G D 3 ? ? 0.062 'SIDE CHAIN' 138 11 G D 5 ? ? 0.111 'SIDE CHAIN' 139 12 G A 2 ? ? 0.111 'SIDE CHAIN' 140 12 U A 4 ? ? 0.060 'SIDE CHAIN' 141 12 U B 1 ? ? 0.060 'SIDE CHAIN' 142 12 G B 2 ? ? 0.110 'SIDE CHAIN' 143 12 G B 5 ? ? 0.130 'SIDE CHAIN' 144 12 G C 2 ? ? 0.069 'SIDE CHAIN' 145 12 G C 3 ? ? 0.082 'SIDE CHAIN' 146 12 G C 5 ? ? 0.116 'SIDE CHAIN' 147 12 G D 2 ? ? 0.115 'SIDE CHAIN' 148 12 G D 5 ? ? 0.087 'SIDE CHAIN' 149 13 G A 2 ? ? 0.100 'SIDE CHAIN' 150 13 G A 3 ? ? 0.069 'SIDE CHAIN' 151 13 G A 5 ? ? 0.127 'SIDE CHAIN' 152 13 G B 2 ? ? 0.132 'SIDE CHAIN' 153 13 G B 5 ? ? 0.096 'SIDE CHAIN' 154 13 G C 2 ? ? 0.122 'SIDE CHAIN' 155 13 G C 5 ? ? 0.117 'SIDE CHAIN' 156 13 U D 1 ? ? 0.063 'SIDE CHAIN' 157 13 G D 2 ? ? 0.099 'SIDE CHAIN' 158 13 G D 3 ? ? 0.063 'SIDE CHAIN' 159 13 G D 5 ? ? 0.079 'SIDE CHAIN' 160 14 G A 2 ? ? 0.108 'SIDE CHAIN' 161 14 G A 3 ? ? 0.067 'SIDE CHAIN' 162 14 G A 5 ? ? 0.110 'SIDE CHAIN' 163 14 U A 7 ? ? 0.075 'SIDE CHAIN' 164 14 G B 2 ? ? 0.106 'SIDE CHAIN' 165 14 G B 3 ? ? 0.102 'SIDE CHAIN' 166 14 G B 5 ? ? 0.115 'SIDE CHAIN' 167 14 G C 2 ? ? 0.125 'SIDE CHAIN' 168 14 G C 5 ? ? 0.083 'SIDE CHAIN' 169 14 G D 2 ? ? 0.106 'SIDE CHAIN' 170 14 G D 5 ? ? 0.072 'SIDE CHAIN' 171 15 G A 2 ? ? 0.131 'SIDE CHAIN' 172 15 G A 3 ? ? 0.060 'SIDE CHAIN' 173 15 G A 5 ? ? 0.103 'SIDE CHAIN' 174 15 G B 2 ? ? 0.064 'SIDE CHAIN' 175 15 G B 5 ? ? 0.114 'SIDE CHAIN' 176 15 U C 1 ? ? 0.078 'SIDE CHAIN' 177 15 G C 2 ? ? 0.105 'SIDE CHAIN' 178 15 G C 3 ? ? 0.065 'SIDE CHAIN' 179 15 G C 5 ? ? 0.102 'SIDE CHAIN' 180 15 G D 2 ? ? 0.101 'SIDE CHAIN' 181 15 G D 3 ? ? 0.070 'SIDE CHAIN' 182 15 G D 5 ? ? 0.080 'SIDE CHAIN' # _ndb_struct_conf_na.entry_id 6GE1 _ndb_struct_conf_na.feature 'double helix' # _ndb_struct_na_base_pair.model_number 1 _ndb_struct_na_base_pair.i_label_asym_id A _ndb_struct_na_base_pair.i_label_comp_id G _ndb_struct_na_base_pair.i_label_seq_id 2 _ndb_struct_na_base_pair.i_symmetry 1_555 _ndb_struct_na_base_pair.j_label_asym_id D _ndb_struct_na_base_pair.j_label_comp_id G _ndb_struct_na_base_pair.j_label_seq_id 2 _ndb_struct_na_base_pair.j_symmetry 1_555 _ndb_struct_na_base_pair.shear 1.352 _ndb_struct_na_base_pair.stretch 3.556 _ndb_struct_na_base_pair.stagger -0.045 _ndb_struct_na_base_pair.buckle -3.646 _ndb_struct_na_base_pair.propeller 4.333 _ndb_struct_na_base_pair.opening -91.942 _ndb_struct_na_base_pair.pair_number 1 _ndb_struct_na_base_pair.pair_name A_G2:G2_D _ndb_struct_na_base_pair.i_auth_asym_id A _ndb_struct_na_base_pair.i_auth_seq_id 2 _ndb_struct_na_base_pair.i_PDB_ins_code ? _ndb_struct_na_base_pair.j_auth_asym_id D _ndb_struct_na_base_pair.j_auth_seq_id 2 _ndb_struct_na_base_pair.j_PDB_ins_code ? _ndb_struct_na_base_pair.hbond_type_28 6 _ndb_struct_na_base_pair.hbond_type_12 3 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Science Center' Poland UMO-2014/13/B/ST5/04144 1 'National Science Center' Poland UMO-2013/08/A/ST5/00295 2 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support SAXS _pdbx_struct_assembly_auth_evidence.details ? #