HEADER HYDROLASE 27-APR-18 6GER TITLE WHEAT B-AMYLASE, A CLINICALLY RELEVANT FOOD ALLERGEN COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-AMYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 1,4-ALPHA-D-GLUCAN MALTOHYDROLASE; COMPND 5 EC: 3.2.1.2; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: C-TERMINAL HIS-TAG, 2 N-TERMINAL AMINO ACIDS AND 19 C- COMPND 8 TERMINAL AMINO ACIDS ARE NOT VISIBLE IN THE 2FO-FC MAP SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRITICUM AESTIVUM; SOURCE 3 ORGANISM_COMMON: WHEAT; SOURCE 4 ORGANISM_TAXID: 4565; SOURCE 5 GENE: BMY1, AMY1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TIM BARREL, WHEAT ALLERGEN, FOOD ALLERGEN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.HOFER,W.KELLER REVDAT 1 19-DEC-18 6GER 0 JRNL AUTH G.HOFER,S.WIESER,M.K.BOGDOS,P.GATTINGER,R.NAKAMURA, JRNL AUTH 2 M.EBISAWA,M.MAKELA,N.PAPADOPOULOS,R.VALENTA,W.KELLER JRNL TITL THREE-DIMENSIONAL STRUCTURE OF THE WHEAT BETA-AMYLASE TRI A JRNL TITL 2 17, A CLINICALLY RELEVANT FOOD ALLERGEN. JRNL REF ALLERGY 2018 JRNL REFN ESSN 1398-9995 JRNL PMID 30515829 JRNL DOI 10.1111/ALL.13696 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.V.AFONINE,R.W.GROSSE-KUNSTLEVE,N.ECHOLS,J.J.HEADD, REMARK 1 AUTH 2 N.W.MORIARTY,M.MUSTYAKIMOV,T.C.TERWILLIGER,A.URZHUMTSEV, REMARK 1 AUTH 3 P.H.ZWART,P.D.ADAMS REMARK 1 TITL TOWARDS AUTOMATED CRYSTALLOGRAPHIC STRUCTURE REFINEMENT WITH REMARK 1 TITL 2 PHENIX.REFINE. REMARK 1 REF ACTA CRYSTALLOGR. D BIOL. V. 68 352 2012 REMARK 1 REF 2 CRYSTALLOGR. REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 22505256 REMARK 1 DOI 10.1107/S0907444912001308 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.334 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 3 NUMBER OF REFLECTIONS : 38550 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.540 REMARK 3 FREE R VALUE TEST SET COUNT : 1253 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.0649 - 4.1558 1.00 4258 159 0.1216 0.1454 REMARK 3 2 4.1558 - 3.3004 0.86 3584 130 0.1332 0.1698 REMARK 3 3 3.3004 - 2.8838 1.00 4160 158 0.1404 0.1775 REMARK 3 4 2.8838 - 2.6204 0.91 3775 140 0.1493 0.2051 REMARK 3 5 2.6204 - 2.4327 1.00 4134 148 0.1541 0.1755 REMARK 3 6 2.4327 - 2.2893 0.99 4102 151 0.1734 0.2319 REMARK 3 7 2.2893 - 2.1747 0.68 2834 100 0.3643 0.4412 REMARK 3 8 2.1747 - 2.0801 1.00 3829 141 0.1742 0.1995 REMARK 3 9 2.0801 - 2.0000 1.00 3593 130 0.1803 0.2065 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.144 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.548 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.37 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4064 REMARK 3 ANGLE : 0.542 5523 REMARK 3 CHIRALITY : 0.039 572 REMARK 3 PLANARITY : 0.003 731 REMARK 3 DIHEDRAL : 15.878 2433 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 136.5254 -80.0492 14.3326 REMARK 3 T TENSOR REMARK 3 T11: 0.2019 T22: 0.0760 REMARK 3 T33: 0.0930 T12: 0.0301 REMARK 3 T13: 0.0312 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 0.4947 L22: 0.6950 REMARK 3 L33: 0.6149 L12: 0.1950 REMARK 3 L13: -0.0471 L23: -0.3431 REMARK 3 S TENSOR REMARK 3 S11: -0.0204 S12: -0.0869 S13: -0.0109 REMARK 3 S21: 0.3740 S22: 0.0721 S23: 0.1556 REMARK 3 S31: 0.1256 S32: 0.0631 S33: -0.0252 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 58 THROUGH 194 ) REMARK 3 ORIGIN FOR THE GROUP (A): 140.6401 -66.8105 2.6285 REMARK 3 T TENSOR REMARK 3 T11: 0.0970 T22: 0.0468 REMARK 3 T33: 0.0514 T12: 0.0145 REMARK 3 T13: 0.0076 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.8443 L22: 0.7666 REMARK 3 L33: 0.9863 L12: 0.1724 REMARK 3 L13: -0.1062 L23: 0.2024 REMARK 3 S TENSOR REMARK 3 S11: 0.0020 S12: -0.0144 S13: 0.0245 REMARK 3 S21: 0.0601 S22: -0.0075 S23: 0.0079 REMARK 3 S31: -0.0102 S32: 0.0363 S33: 0.0095 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 195 THROUGH 221 ) REMARK 3 ORIGIN FOR THE GROUP (A): 128.9026 -61.6719 -15.3813 REMARK 3 T TENSOR REMARK 3 T11: 0.0889 T22: 0.0794 REMARK 3 T33: 0.0910 T12: 0.0385 REMARK 3 T13: -0.0244 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 2.8448 L22: 1.3701 REMARK 3 L33: 2.6791 L12: 0.3383 REMARK 3 L13: -1.3689 L23: -0.2337 REMARK 3 S TENSOR REMARK 3 S11: -0.0525 S12: 0.0734 S13: 0.1084 REMARK 3 S21: -0.1269 S22: 0.0366 S23: 0.1466 REMARK 3 S31: -0.0600 S32: -0.0425 S33: -0.0184 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 222 THROUGH 254 ) REMARK 3 ORIGIN FOR THE GROUP (A): 119.6766 -64.5862 -22.0044 REMARK 3 T TENSOR REMARK 3 T11: 0.1867 T22: 0.2176 REMARK 3 T33: 0.2363 T12: 0.0355 REMARK 3 T13: -0.0914 T23: 0.0392 REMARK 3 L TENSOR REMARK 3 L11: 2.2852 L22: 0.8785 REMARK 3 L33: 1.7372 L12: 0.1300 REMARK 3 L13: -0.7881 L23: -0.1384 REMARK 3 S TENSOR REMARK 3 S11: 0.0087 S12: 0.4384 S13: 0.1546 REMARK 3 S21: -0.2100 S22: 0.1172 S23: 0.3809 REMARK 3 S31: -0.1322 S32: -0.3132 S33: -0.0505 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 255 THROUGH 306 ) REMARK 3 ORIGIN FOR THE GROUP (A): 134.6061 -74.5173 -11.7321 REMARK 3 T TENSOR REMARK 3 T11: 0.1007 T22: 0.0603 REMARK 3 T33: 0.0563 T12: 0.0128 REMARK 3 T13: -0.0089 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 1.3818 L22: 0.7389 REMARK 3 L33: 0.6822 L12: -0.1653 REMARK 3 L13: 0.1962 L23: -0.0637 REMARK 3 S TENSOR REMARK 3 S11: -0.0094 S12: 0.0983 S13: 0.0030 REMARK 3 S21: -0.0838 S22: 0.0106 S23: 0.0882 REMARK 3 S31: -0.0252 S32: -0.0353 S33: -0.0064 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 307 THROUGH 345 ) REMARK 3 ORIGIN FOR THE GROUP (A): 130.3705 -80.5550 -11.2778 REMARK 3 T TENSOR REMARK 3 T11: 0.1469 T22: 0.1042 REMARK 3 T33: 0.1108 T12: -0.0141 REMARK 3 T13: -0.0135 T23: -0.0147 REMARK 3 L TENSOR REMARK 3 L11: 0.4438 L22: 0.6740 REMARK 3 L33: 0.5569 L12: 0.1009 REMARK 3 L13: -0.1868 L23: -0.0670 REMARK 3 S TENSOR REMARK 3 S11: -0.0187 S12: 0.0026 S13: -0.1203 REMARK 3 S21: -0.0448 S22: 0.0001 S23: 0.1422 REMARK 3 S31: 0.1099 S32: -0.1118 S33: 0.0188 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 346 THROUGH 406 ) REMARK 3 ORIGIN FOR THE GROUP (A): 124.1355 -89.1158 -2.6804 REMARK 3 T TENSOR REMARK 3 T11: 0.1478 T22: 0.1275 REMARK 3 T33: 0.1769 T12: -0.0221 REMARK 3 T13: 0.0164 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.5394 L22: 0.7673 REMARK 3 L33: 1.1605 L12: 0.1645 REMARK 3 L13: -0.0937 L23: -0.1082 REMARK 3 S TENSOR REMARK 3 S11: -0.0479 S12: 0.0016 S13: -0.0367 REMARK 3 S21: 0.0641 S22: 0.0368 S23: 0.2970 REMARK 3 S31: 0.1972 S32: -0.2709 S33: -0.0168 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 407 THROUGH 439 ) REMARK 3 ORIGIN FOR THE GROUP (A): 127.7935 -89.4752 10.8220 REMARK 3 T TENSOR REMARK 3 T11: 0.2107 T22: 0.1029 REMARK 3 T33: 0.1498 T12: 0.0071 REMARK 3 T13: 0.0541 T23: 0.0298 REMARK 3 L TENSOR REMARK 3 L11: 0.9921 L22: 1.2556 REMARK 3 L33: 1.5929 L12: 0.1343 REMARK 3 L13: -0.1691 L23: 0.1799 REMARK 3 S TENSOR REMARK 3 S11: -0.0042 S12: -0.1712 S13: -0.0592 REMARK 3 S21: 0.1059 S22: -0.0244 S23: 0.3347 REMARK 3 S31: 0.0900 S32: -0.2017 S33: 0.0053 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 440 THROUGH 490 ) REMARK 3 ORIGIN FOR THE GROUP (A): 135.1797 -90.3827 -6.4478 REMARK 3 T TENSOR REMARK 3 T11: 0.2128 T22: 0.0472 REMARK 3 T33: 0.1681 T12: 0.0183 REMARK 3 T13: 0.0110 T23: -0.0393 REMARK 3 L TENSOR REMARK 3 L11: 0.6020 L22: 0.9420 REMARK 3 L33: 1.3422 L12: 0.1463 REMARK 3 L13: -0.0294 L23: -0.6756 REMARK 3 S TENSOR REMARK 3 S11: -0.0267 S12: 0.0314 S13: -0.0651 REMARK 3 S21: -0.1006 S22: 0.0279 S23: 0.1302 REMARK 3 S31: 0.1898 S32: -0.1653 S33: 0.0031 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GER COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-APR-18. REMARK 100 THE DEPOSITION ID IS D_1200009740. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-SEP-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 5.2R REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9717 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38550 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 27.062 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.12030 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.9300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.28610 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.760 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350 100MM BIS-TRIS PH 5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.93000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 49.39500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 16.46500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 HIS A 491 REMARK 465 THR A 492 REMARK 465 ASP A 493 REMARK 465 VAL A 494 REMARK 465 GLY A 495 REMARK 465 ASP A 496 REMARK 465 GLU A 497 REMARK 465 VAL A 498 REMARK 465 LEU A 499 REMARK 465 VAL A 500 REMARK 465 ALA A 501 REMARK 465 PRO A 502 REMARK 465 VAL A 503 REMARK 465 HIS A 504 REMARK 465 HIS A 505 REMARK 465 HIS A 506 REMARK 465 HIS A 507 REMARK 465 HIS A 508 REMARK 465 HIS A 509 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 176 HD22 ASN A 338 1.58 REMARK 500 O HOH A 1081 O HOH A 1100 2.05 REMARK 500 OD1 ASN A 249 O HOH A 601 2.07 REMARK 500 OE2 GLU A 408 O HOH A 602 2.14 REMARK 500 OE1 GLU A 184 OG SER A 295 2.18 REMARK 500 O HOH A 841 O HOH A 919 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 199 56.43 -106.70 REMARK 500 ALA A 356 66.48 -151.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1113 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH A1114 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH A1115 DISTANCE = 6.56 ANGSTROMS DBREF 6GER A 1 503 UNP P93594 AMYB_WHEAT 1 503 SEQADV 6GER HIS A 504 UNP P93594 EXPRESSION TAG SEQADV 6GER HIS A 505 UNP P93594 EXPRESSION TAG SEQADV 6GER HIS A 506 UNP P93594 EXPRESSION TAG SEQADV 6GER HIS A 507 UNP P93594 EXPRESSION TAG SEQADV 6GER HIS A 508 UNP P93594 EXPRESSION TAG SEQADV 6GER HIS A 509 UNP P93594 EXPRESSION TAG SEQRES 1 A 509 MET ALA GLY ASN MET LEU ALA ASN TYR VAL GLN VAL TYR SEQRES 2 A 509 VAL MET LEU PRO LEU ASP VAL VAL SER VAL ASP ASN LYS SEQRES 3 A 509 PHE GLU LYS GLY ASP GLU ILE ARG ALA GLN LEU LYS LYS SEQRES 4 A 509 LEU THR GLU ALA GLY VAL ASP GLY VAL MET ILE ASP VAL SEQRES 5 A 509 TRP TRP GLY LEU VAL GLU GLY LYS GLY PRO LYS ALA TYR SEQRES 6 A 509 ASP TRP SER ALA TYR LYS GLN VAL PHE ASP LEU VAL HIS SEQRES 7 A 509 GLU ALA GLY LEU LYS LEU GLN ALA ILE MET SER PHE HIS SEQRES 8 A 509 GLN CYS GLY GLY ASN VAL GLY ASP VAL VAL ASN ILE PRO SEQRES 9 A 509 ILE PRO GLN TRP VAL ARG ASP VAL GLY ALA THR ASP PRO SEQRES 10 A 509 ASP ILE PHE TYR THR ASN ARG GLY GLY THR ARG ASN ILE SEQRES 11 A 509 GLU TYR LEU THR LEU GLY VAL ASP ASP GLN PRO LEU PHE SEQRES 12 A 509 HIS GLY ARG THR ALA VAL GLN MET TYR ALA ASP TYR MET SEQRES 13 A 509 ALA SER PHE ARG GLU ASN MET LYS LYS PHE LEU ASP ALA SEQRES 14 A 509 GLY THR ILE VAL ASP ILE GLU VAL GLY LEU GLY PRO ALA SEQRES 15 A 509 GLY GLU MET ARG TYR PRO SER TYR PRO GLN SER GLN GLY SEQRES 16 A 509 TRP VAL PHE PRO GLY ILE GLY GLU PHE ILE CYS TYR ASP SEQRES 17 A 509 LYS TYR LEU GLU ALA ASP PHE LYS ALA ALA ALA ALA LYS SEQRES 18 A 509 ALA GLY HIS PRO GLU TRP GLU LEU PRO ASP ASP ALA GLY SEQRES 19 A 509 GLU TYR ASN ASP THR PRO GLU LYS THR GLN PHE PHE LYS SEQRES 20 A 509 ASP ASN GLY THR TYR LEU THR GLU LYS GLY LYS PHE PHE SEQRES 21 A 509 LEU SER TRP TYR SER ASN LYS LEU ILE LYS HIS GLY ASP SEQRES 22 A 509 LYS ILE LEU ASP GLU ALA ASN LYS VAL PHE LEU GLY CYS SEQRES 23 A 509 ARG VAL GLN LEU ALA ILE LYS ILE SER GLY ILE HIS TRP SEQRES 24 A 509 TRP TYR ARG VAL PRO ASN HIS ALA ALA GLU LEU THR ALA SEQRES 25 A 509 GLY TYR TYR ASN LEU ASP ASP ARG ASP GLY TYR ARG THR SEQRES 26 A 509 ILE ALA ARG MET LEU THR ARG HIS HIS ALA SER MET ASN SEQRES 27 A 509 PHE THR CYS ALA GLU MET ARG ASP SER GLU GLN SER GLU SEQRES 28 A 509 GLU ALA LYS SER ALA PRO GLU GLU LEU VAL GLN GLN VAL SEQRES 29 A 509 LEU SER ALA GLY TRP ARG GLU GLY LEU HIS VAL ALA CYS SEQRES 30 A 509 GLU ASN ALA LEU GLY ARG TYR ASP ALA THR ALA TYR ASN SEQRES 31 A 509 THR ILE LEU ARG ASN ALA ARG PRO LYS GLY ILE ASN LYS SEQRES 32 A 509 ASN GLY PRO PRO GLU HIS LYS LEU PHE GLY PHE THR TYR SEQRES 33 A 509 LEU ARG LEU SER ASN GLU LEU LEU GLU GLY GLN ASN TYR SEQRES 34 A 509 ALA THR PHE GLN THR PHE VAL GLU LYS MET HIS ALA ASN SEQRES 35 A 509 LEU GLY HIS ASP PRO SER VAL ASP PRO VAL ALA PRO LEU SEQRES 36 A 509 GLU ARG SER LYS PRO GLU MET PRO ILE GLU MET ILE LEU SEQRES 37 A 509 LYS ALA ALA GLN PRO LYS LEU GLU PRO PHE PRO PHE ASP SEQRES 38 A 509 LYS ASN THR ASP LEU PRO VAL LYS ASP HIS THR ASP VAL SEQRES 39 A 509 GLY ASP GLU VAL LEU VAL ALA PRO VAL HIS HIS HIS HIS SEQRES 40 A 509 HIS HIS FORMUL 2 HOH *515(H2 O) HELIX 1 AA1 MET A 5 TYR A 9 5 5 HELIX 2 AA2 LYS A 29 ALA A 43 1 15 HELIX 3 AA3 TRP A 54 GLU A 58 1 5 HELIX 4 AA4 TRP A 67 ALA A 80 1 14 HELIX 5 AA5 PRO A 106 ASP A 111 1 6 HELIX 6 AA6 VAL A 112 THR A 115 5 4 HELIX 7 AA7 ASP A 116 ASP A 118 5 3 HELIX 8 AA8 LEU A 135 ASP A 138 5 4 HELIX 9 AA9 THR A 147 MET A 163 1 17 HELIX 10 AB1 MET A 163 ALA A 169 1 7 HELIX 11 AB2 GLY A 180 GLU A 184 5 5 HELIX 12 AB3 PRO A 191 GLY A 195 5 5 HELIX 13 AB4 ASP A 208 ALA A 222 1 15 HELIX 14 AB5 THR A 239 THR A 243 5 5 HELIX 15 AB6 GLY A 250 LEU A 253 5 4 HELIX 16 AB7 THR A 254 PHE A 283 1 30 HELIX 17 AB8 HIS A 306 GLY A 313 1 8 HELIX 18 AB9 TYR A 323 ARG A 332 1 10 HELIX 19 AC1 ARG A 345 GLN A 349 5 5 HELIX 20 AC2 SER A 350 LYS A 354 5 5 HELIX 21 AC3 ALA A 356 GLU A 371 1 16 HELIX 22 AC4 ASP A 385 ARG A 397 1 13 HELIX 23 AC5 SER A 420 LEU A 424 5 5 HELIX 24 AC6 GLU A 425 HIS A 440 1 16 HELIX 25 AC7 PRO A 463 ALA A 470 1 8 SHEET 1 AA1 9 GLN A 11 MET A 15 0 SHEET 2 AA1 9 GLY A 47 TRP A 53 1 O MET A 49 N VAL A 14 SHEET 3 AA1 9 LYS A 83 SER A 89 1 O ILE A 87 N ILE A 50 SHEET 4 AA1 9 ILE A 172 VAL A 177 1 O GLU A 176 N MET A 88 SHEET 5 AA1 9 GLN A 289 LYS A 293 1 O ALA A 291 N VAL A 177 SHEET 6 AA1 9 SER A 336 PHE A 339 1 O SER A 336 N LEU A 290 SHEET 7 AA1 9 VAL A 375 GLU A 378 1 O ALA A 376 N PHE A 339 SHEET 8 AA1 9 GLY A 413 TYR A 416 1 O THR A 415 N CYS A 377 SHEET 9 AA1 9 GLN A 11 MET A 15 1 N TYR A 13 O PHE A 414 SHEET 1 AA2 2 PHE A 120 THR A 122 0 SHEET 2 AA2 2 ARG A 128 LEU A 133 -1 O ASN A 129 N TYR A 121 CISPEP 1 PHE A 198 PRO A 199 0 1.67 CISPEP 2 LEU A 417 ARG A 418 0 7.04 CISPEP 3 GLN A 472 PRO A 473 0 -5.23 CRYST1 93.870 93.870 65.860 90.00 90.00 90.00 P 43 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010653 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010653 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015184 0.00000