data_6GF8 # _entry.id 6GF8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6GF8 pdb_00006gf8 10.2210/pdb6gf8/pdb WWPDB D_1200009795 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-06-19 2 'Structure model' 1 1 2019-07-17 3 'Structure model' 1 2 2019-07-24 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2021-10-20 6 'Structure model' 2 2 2024-01-17 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 4 'Structure model' Advisory 6 4 'Structure model' 'Atomic model' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Derived calculations' 9 4 'Structure model' 'Structure summary' 10 5 'Structure model' 'Database references' 11 5 'Structure model' 'Derived calculations' 12 5 'Structure model' 'Source and taxonomy' 13 5 'Structure model' 'Structure summary' 14 6 'Structure model' 'Data collection' 15 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 4 'Structure model' atom_site 4 4 'Structure model' atom_site_anisotrop 5 4 'Structure model' chem_comp 6 4 'Structure model' entity 7 4 'Structure model' pdbx_branch_scheme 8 4 'Structure model' pdbx_chem_comp_identifier 9 4 'Structure model' pdbx_entity_branch 10 4 'Structure model' pdbx_entity_branch_descriptor 11 4 'Structure model' pdbx_entity_branch_link 12 4 'Structure model' pdbx_entity_branch_list 13 4 'Structure model' pdbx_entity_nonpoly 14 4 'Structure model' pdbx_nonpoly_scheme 15 4 'Structure model' pdbx_struct_assembly_gen 16 4 'Structure model' pdbx_validate_close_contact 17 4 'Structure model' struct_asym 18 4 'Structure model' struct_conn 19 4 'Structure model' struct_site 20 4 'Structure model' struct_site_gen 21 5 'Structure model' chem_comp 22 5 'Structure model' database_2 23 5 'Structure model' entity_src_gen 24 5 'Structure model' pdbx_database_related 25 5 'Structure model' struct_conn 26 6 'Structure model' chem_comp_atom 27 6 'Structure model' chem_comp_bond 28 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.year' 7 3 'Structure model' '_citation.journal_volume' 8 3 'Structure model' '_citation.page_first' 9 3 'Structure model' '_citation.page_last' 10 3 'Structure model' '_citation.pdbx_database_id_PubMed' 11 3 'Structure model' '_citation.title' 12 4 'Structure model' '_atom_site.B_iso_or_equiv' 13 4 'Structure model' '_atom_site.Cartn_x' 14 4 'Structure model' '_atom_site.Cartn_y' 15 4 'Structure model' '_atom_site.Cartn_z' 16 4 'Structure model' '_atom_site.auth_asym_id' 17 4 'Structure model' '_atom_site.auth_atom_id' 18 4 'Structure model' '_atom_site.auth_comp_id' 19 4 'Structure model' '_atom_site.auth_seq_id' 20 4 'Structure model' '_atom_site.label_asym_id' 21 4 'Structure model' '_atom_site.label_atom_id' 22 4 'Structure model' '_atom_site.label_comp_id' 23 4 'Structure model' '_atom_site.label_entity_id' 24 4 'Structure model' '_atom_site.type_symbol' 25 4 'Structure model' '_atom_site_anisotrop.id' 26 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 27 4 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 28 4 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 29 4 'Structure model' '_chem_comp.name' 30 4 'Structure model' '_chem_comp.type' 31 4 'Structure model' '_entity.formula_weight' 32 4 'Structure model' '_entity.pdbx_description' 33 4 'Structure model' '_entity.pdbx_number_of_molecules' 34 4 'Structure model' '_entity.type' 35 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 36 4 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 37 4 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 38 4 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 39 4 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 40 4 'Structure model' '_struct_conn.pdbx_dist_value' 41 4 'Structure model' '_struct_conn.pdbx_role' 42 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 43 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 44 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 45 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 46 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 47 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 48 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 49 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 50 4 'Structure model' '_struct_conn.ptnr2_symmetry' 51 5 'Structure model' '_chem_comp.pdbx_synonyms' 52 5 'Structure model' '_database_2.pdbx_DOI' 53 5 'Structure model' '_database_2.pdbx_database_accession' 54 5 'Structure model' '_entity_src_gen.host_org_common_name' 55 5 'Structure model' '_entity_src_gen.pdbx_host_org_atcc' 56 5 'Structure model' '_entity_src_gen.pdbx_host_org_cell_line' 57 5 'Structure model' '_pdbx_database_related.db_id' 58 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6GF8 _pdbx_database_status.recvd_initial_deposition_date 2018-04-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'High-resolution orthorhombic structure of the same protein, treated with Endo-H' 6GF6 unspecified PDB 'Zn-SAD orthorhombic structure of the same protein, treated with Endo-H' 6GF7 unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Nishimura, K.' 1 ? 'Jovine, L.' 2 0000-0002-2679-6946 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? UK ? ? primary 'Nat Commun' ? ? 2041-1723 ? ? 10 ? 3086 3086 'Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility.' 2019 ? 10.1038/s41467-019-10931-5 31300655 ? ? ? ? ? ? ? ? UK ? ? 1 'J. Mol. Biol.' JMOBAK 0070 0022-2836 ? ? 181 ? 253 264 'Mouse egg extracellular coat is a matrix of interconnected filaments possessing a structural repeat.' 1985 ? ? 3845123 ? ? ? ? ? ? ? ? UK ? ? 2 Development ? ? 0950-1991 ? ? 126 ? 3847 3855 'Abnormal zonae pellucidae in mice lacking ZP1 result in early embryonic loss.' 1999 ? ? 10433913 ? ? ? ? ? ? ? ? ? ? ? 3 'Biol. Reprod.' ? ? 0006-3363 ? ? 64 ? 822 830 ;Morphological and biochemical changes of isolated chicken egg-envelope during sperm penetration: degradation of the 97-kilodalton glycoprotein is involved in sperm-driven hole formation on the egg-envelope. ; 2001 ? ? 11207197 ? ? ? ? ? ? ? ? UK ? ? 4 'Biochem. J.' BIJOAK 0043 1470-8728 ? ? 384 ? 191 199 ;A newly identified zona pellucida glycoprotein, ZPD, and dimeric ZP1 of chicken egg envelope are involved in sperm activation on sperm-egg interaction. ; 2004 ? 10.1042/BJ20040299 15264999 ? ? ? ? ? ? ? ? US ? ? 5 'N. Engl. J. Med.' ? ? 1533-4406 ? ? 370 ? 1220 1226 'Mutant ZP1 in familial infertility.' 2014 ? 10.1056/NEJMoa1308851 24670168 ? ? ? ? ? ? ? ? NE ? ? 6 'FEBS Open Bio' ? ? 2211-5463 ? ? 5 ? 454 465 ;Identification of distinctive interdomain interactions among ZP-N, ZP-C and other domains of zona pellucida glycoproteins underlying association of chicken egg-coat matrix. ; 2015 ? 10.1016/j.fob.2015.05.005 26106520 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nishimura, K.' 1 ? primary 'Dioguardi, E.' 2 ? primary 'Nishio, S.' 3 ? primary 'Villa, A.' 4 ? primary 'Han, L.' 5 ? primary 'Matsuda, T.' 6 ? primary 'Jovine, L.' 7 ? 1 'Greve, J.M.' 8 ? 1 'Wassarman, P.M.' 9 ? 2 'Rankin, T.' 10 ? 2 'Talbot, P.' 11 ? 2 'Lee, E.' 12 ? 2 'Dean, J.' 13 ? 3 'Takeuchi, Y.' 14 ? 3 'Cho, R.' 15 ? 3 'Iwata, Y.' 16 ? 3 'Nishimura, K.' 17 ? 3 'Kato, T.' 18 ? 3 'Aoki, N.' 19 ? 3 'Kitajima, K.' 20 ? 3 'Matsuda, T.' 21 ? 4 'Okumura, H.' 22 ? 4 'Kohno, Y.' 23 ? 4 'Iwata, Y.' 24 ? 4 'Mori, H.' 25 ? 4 'Aoki, N.' 26 ? 4 'Sato, C.' 27 ? 4 'Kitajima, K.' 28 ? 4 'Nadano, D.' 29 ? 4 'Matsuda, T.' 30 ? 5 'Huang, H.L.' 31 ? 5 'Lv, C.' 32 ? 5 'Zhao, Y.C.' 33 ? 5 'Li, W.' 34 ? 5 'He, X.M.' 35 ? 5 'Li, P.' 36 ? 5 'Sha, A.G.' 37 ? 5 'Tian, X.' 38 ? 5 'Papasian, C.J.' 39 ? 5 'Deng, H.W.' 40 ? 5 'Lu, G.X.' 41 ? 5 'Xiao, H.M.' 42 ? 6 'Okumura, H.' 43 ? 6 'Sato, T.' 44 ? 6 'Sakuma, R.' 45 ? 6 'Fukushima, H.' 46 ? 6 'Matsuda, T.' 47 ? 6 'Ujita, M.' 48 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Zona pellucida sperm-binding protein 1,Zona pellucida sperm-binding protein 1' 15485.485 2 ? 'N121Q, G140H(6), G149S,N121Q, G140H(6), G149S' ? ? 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose' 570.542 1 ? ? ? ? 3 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 4 non-polymer man '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 4 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;DAAQPALLQYHYDCGDFGMQLLAYPTRGRTVHFKVLDEFGTRFEVANCSICMHWLNTGEDGGLIFSAGYEGCHVLVKDGR YVLRVQLEEMLLSGVVAASYEVQMTCPRPAGYEILRDEKVHHHHHHHHQRPDRGNS ; _entity_poly.pdbx_seq_one_letter_code_can ;DAAQPALLQYHYDCGDFGMQLLAYPTRGRTVHFKVLDEFGTRFEVANCSICMHWLNTGEDGGLIFSAGYEGCHVLVKDGR YVLRVQLEEMLLSGVVAASYEVQMTCPRPAGYEILRDEKVHHHHHHHHQRPDRGNS ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name '(4S)-2-METHYL-2,4-PENTANEDIOL' _pdbx_entity_nonpoly.comp_id MPD # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ALA n 1 3 ALA n 1 4 GLN n 1 5 PRO n 1 6 ALA n 1 7 LEU n 1 8 LEU n 1 9 GLN n 1 10 TYR n 1 11 HIS n 1 12 TYR n 1 13 ASP n 1 14 CYS n 1 15 GLY n 1 16 ASP n 1 17 PHE n 1 18 GLY n 1 19 MET n 1 20 GLN n 1 21 LEU n 1 22 LEU n 1 23 ALA n 1 24 TYR n 1 25 PRO n 1 26 THR n 1 27 ARG n 1 28 GLY n 1 29 ARG n 1 30 THR n 1 31 VAL n 1 32 HIS n 1 33 PHE n 1 34 LYS n 1 35 VAL n 1 36 LEU n 1 37 ASP n 1 38 GLU n 1 39 PHE n 1 40 GLY n 1 41 THR n 1 42 ARG n 1 43 PHE n 1 44 GLU n 1 45 VAL n 1 46 ALA n 1 47 ASN n 1 48 CYS n 1 49 SER n 1 50 ILE n 1 51 CYS n 1 52 MET n 1 53 HIS n 1 54 TRP n 1 55 LEU n 1 56 ASN n 1 57 THR n 1 58 GLY n 1 59 GLU n 1 60 ASP n 1 61 GLY n 1 62 GLY n 1 63 LEU n 1 64 ILE n 1 65 PHE n 1 66 SER n 1 67 ALA n 1 68 GLY n 1 69 TYR n 1 70 GLU n 1 71 GLY n 1 72 CYS n 1 73 HIS n 1 74 VAL n 1 75 LEU n 1 76 VAL n 1 77 LYS n 1 78 ASP n 1 79 GLY n 1 80 ARG n 1 81 TYR n 1 82 VAL n 1 83 LEU n 1 84 ARG n 1 85 VAL n 1 86 GLN n 1 87 LEU n 1 88 GLU n 1 89 GLU n 1 90 MET n 1 91 LEU n 1 92 LEU n 1 93 SER n 1 94 GLY n 1 95 VAL n 1 96 VAL n 1 97 ALA n 1 98 ALA n 1 99 SER n 1 100 TYR n 1 101 GLU n 1 102 VAL n 1 103 GLN n 1 104 MET n 1 105 THR n 1 106 CYS n 1 107 PRO n 1 108 ARG n 1 109 PRO n 1 110 ALA n 1 111 GLY n 1 112 TYR n 1 113 GLU n 1 114 ILE n 1 115 LEU n 1 116 ARG n 1 117 ASP n 1 118 GLU n 1 119 LYS n 1 120 VAL n 1 121 HIS n 1 122 HIS n 1 123 HIS n 1 124 HIS n 1 125 HIS n 1 126 HIS n 1 127 HIS n 1 128 HIS n 1 129 GLN n 1 130 ARG n 1 131 PRO n 1 132 ASP n 1 133 ARG n 1 134 GLY n 1 135 ASN n 1 136 SER n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 121 Chicken ? ZP1 ? ? ? ? ? ? 'Gallus gallus' 9031 ? ? ? ? ? ? ? Human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293T ? ? ? ? ? Plasmid ? ATUM/DNA2.0 ? pJ609 ? ? 1 2 sample 'Biological sequence' 129 136 Chicken ? ZP1 ? ? ? ? ? ? 'Gallus gallus' 9031 ? ? ? ? ? ? ? Human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293T ? ? ? ? ? Plasmid ? ATUM/DNA2.0 ? pJ609 ? ? # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-1-2/a4-b1_a6-c1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}[(6+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? 4 3 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 6 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 FUC C1 O1 1 NAG O6 HO6 sing ? 3 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 19 ? ? ? A . n A 1 2 ALA 2 20 ? ? ? A . n A 1 3 ALA 3 21 ? ? ? A . n A 1 4 GLN 4 22 ? ? ? A . n A 1 5 PRO 5 23 ? ? ? A . n A 1 6 ALA 6 24 ? ? ? A . n A 1 7 LEU 7 25 25 LEU LEU A . n A 1 8 LEU 8 26 26 LEU LEU A . n A 1 9 GLN 9 27 27 GLN GLN A . n A 1 10 TYR 10 28 28 TYR TYR A . n A 1 11 HIS 11 29 29 HIS HIS A . n A 1 12 TYR 12 30 30 TYR TYR A . n A 1 13 ASP 13 31 31 ASP ASP A . n A 1 14 CYS 14 32 32 CYS CYS A . n A 1 15 GLY 15 33 33 GLY GLY A . n A 1 16 ASP 16 34 34 ASP ASP A . n A 1 17 PHE 17 35 35 PHE PHE A . n A 1 18 GLY 18 36 36 GLY GLY A . n A 1 19 MET 19 37 37 MET MET A . n A 1 20 GLN 20 38 38 GLN GLN A . n A 1 21 LEU 21 39 39 LEU LEU A . n A 1 22 LEU 22 40 40 LEU LEU A . n A 1 23 ALA 23 41 41 ALA ALA A . n A 1 24 TYR 24 42 42 TYR TYR A . n A 1 25 PRO 25 43 43 PRO PRO A . n A 1 26 THR 26 44 44 THR THR A . n A 1 27 ARG 27 45 45 ARG ARG A . n A 1 28 GLY 28 46 46 GLY GLY A . n A 1 29 ARG 29 47 47 ARG ARG A . n A 1 30 THR 30 48 48 THR THR A . n A 1 31 VAL 31 49 49 VAL VAL A . n A 1 32 HIS 32 50 50 HIS HIS A . n A 1 33 PHE 33 51 51 PHE PHE A . n A 1 34 LYS 34 52 52 LYS LYS A . n A 1 35 VAL 35 53 53 VAL VAL A . n A 1 36 LEU 36 54 54 LEU LEU A . n A 1 37 ASP 37 55 55 ASP ASP A . n A 1 38 GLU 38 56 56 GLU GLU A . n A 1 39 PHE 39 57 57 PHE PHE A . n A 1 40 GLY 40 58 58 GLY GLY A . n A 1 41 THR 41 59 59 THR THR A . n A 1 42 ARG 42 60 60 ARG ARG A . n A 1 43 PHE 43 61 61 PHE PHE A . n A 1 44 GLU 44 62 62 GLU GLU A . n A 1 45 VAL 45 63 63 VAL VAL A . n A 1 46 ALA 46 64 64 ALA ALA A . n A 1 47 ASN 47 65 65 ASN ASN A . n A 1 48 CYS 48 66 66 CYS CYS A . n A 1 49 SER 49 67 67 SER SER A . n A 1 50 ILE 50 68 68 ILE ILE A . n A 1 51 CYS 51 69 69 CYS CYS A . n A 1 52 MET 52 70 70 MET MET A . n A 1 53 HIS 53 71 71 HIS HIS A . n A 1 54 TRP 54 72 72 TRP TRP A . n A 1 55 LEU 55 73 73 LEU LEU A . n A 1 56 ASN 56 74 74 ASN ASN A . n A 1 57 THR 57 75 75 THR THR A . n A 1 58 GLY 58 76 76 GLY GLY A . n A 1 59 GLU 59 77 77 GLU GLU A . n A 1 60 ASP 60 78 78 ASP ASP A . n A 1 61 GLY 61 79 79 GLY GLY A . n A 1 62 GLY 62 80 80 GLY GLY A . n A 1 63 LEU 63 81 81 LEU LEU A . n A 1 64 ILE 64 82 82 ILE ILE A . n A 1 65 PHE 65 83 83 PHE PHE A . n A 1 66 SER 66 84 84 SER SER A . n A 1 67 ALA 67 85 85 ALA ALA A . n A 1 68 GLY 68 86 86 GLY GLY A . n A 1 69 TYR 69 87 87 TYR TYR A . n A 1 70 GLU 70 88 88 GLU GLU A . n A 1 71 GLY 71 89 89 GLY GLY A . n A 1 72 CYS 72 90 90 CYS CYS A . n A 1 73 HIS 73 91 91 HIS HIS A . n A 1 74 VAL 74 92 92 VAL VAL A . n A 1 75 LEU 75 93 93 LEU LEU A . n A 1 76 VAL 76 94 94 VAL VAL A . n A 1 77 LYS 77 95 95 LYS LYS A . n A 1 78 ASP 78 96 96 ASP ASP A . n A 1 79 GLY 79 97 97 GLY GLY A . n A 1 80 ARG 80 98 98 ARG ARG A . n A 1 81 TYR 81 99 99 TYR TYR A . n A 1 82 VAL 82 100 100 VAL VAL A . n A 1 83 LEU 83 101 101 LEU LEU A . n A 1 84 ARG 84 102 102 ARG ARG A . n A 1 85 VAL 85 103 103 VAL VAL A . n A 1 86 GLN 86 104 104 GLN GLN A . n A 1 87 LEU 87 105 105 LEU LEU A . n A 1 88 GLU 88 106 106 GLU GLU A . n A 1 89 GLU 89 107 107 GLU GLU A . n A 1 90 MET 90 108 108 MET MET A . n A 1 91 LEU 91 109 109 LEU LEU A . n A 1 92 LEU 92 110 110 LEU LEU A . n A 1 93 SER 93 111 111 SER SER A . n A 1 94 GLY 94 112 112 GLY GLY A . n A 1 95 VAL 95 113 113 VAL VAL A . n A 1 96 VAL 96 114 114 VAL VAL A . n A 1 97 ALA 97 115 115 ALA ALA A . n A 1 98 ALA 98 116 116 ALA ALA A . n A 1 99 SER 99 117 117 SER SER A . n A 1 100 TYR 100 118 118 TYR TYR A . n A 1 101 GLU 101 119 119 GLU GLU A . n A 1 102 VAL 102 120 120 VAL VAL A . n A 1 103 GLN 103 121 121 GLN GLN A . n A 1 104 MET 104 122 122 MET MET A . n A 1 105 THR 105 123 123 THR THR A . n A 1 106 CYS 106 124 124 CYS CYS A . n A 1 107 PRO 107 125 125 PRO PRO A . n A 1 108 ARG 108 126 126 ARG ARG A . n A 1 109 PRO 109 127 127 PRO PRO A . n A 1 110 ALA 110 128 ? ? ? A . n A 1 111 GLY 111 129 ? ? ? A . n A 1 112 TYR 112 130 ? ? ? A . n A 1 113 GLU 113 131 ? ? ? A . n A 1 114 ILE 114 132 ? ? ? A . n A 1 115 LEU 115 133 ? ? ? A . n A 1 116 ARG 116 134 ? ? ? A . n A 1 117 ASP 117 135 ? ? ? A . n A 1 118 GLU 118 136 ? ? ? A . n A 1 119 LYS 119 137 ? ? ? A . n A 1 120 VAL 120 138 ? ? ? A . n A 1 121 HIS 121 139 ? ? ? A . n A 1 122 HIS 122 140 ? ? ? A . n A 1 123 HIS 123 141 ? ? ? A . n A 1 124 HIS 124 142 ? ? ? A . n A 1 125 HIS 125 143 ? ? ? A . n A 1 126 HIS 126 144 ? ? ? A . n A 1 127 HIS 127 145 ? ? ? A . n A 1 128 HIS 128 146 ? ? ? A . n A 1 129 GLN 129 147 ? ? ? A . n A 1 130 ARG 130 148 ? ? ? A . n A 1 131 PRO 131 149 ? ? ? A . n A 1 132 ASP 132 150 ? ? ? A . n A 1 133 ARG 133 151 ? ? ? A . n A 1 134 GLY 134 152 ? ? ? A . n A 1 135 ASN 135 153 ? ? ? A . n A 1 136 SER 136 154 ? ? ? A . n B 1 1 ASP 1 19 ? ? ? B . n B 1 2 ALA 2 20 ? ? ? B . n B 1 3 ALA 3 21 ? ? ? B . n B 1 4 GLN 4 22 ? ? ? B . n B 1 5 PRO 5 23 23 PRO PRO B . n B 1 6 ALA 6 24 24 ALA ALA B . n B 1 7 LEU 7 25 25 LEU LEU B . n B 1 8 LEU 8 26 26 LEU LEU B . n B 1 9 GLN 9 27 27 GLN GLN B . n B 1 10 TYR 10 28 28 TYR TYR B . n B 1 11 HIS 11 29 29 HIS HIS B . n B 1 12 TYR 12 30 30 TYR TYR B . n B 1 13 ASP 13 31 31 ASP ASP B . n B 1 14 CYS 14 32 32 CYS CYS B . n B 1 15 GLY 15 33 33 GLY GLY B . n B 1 16 ASP 16 34 34 ASP ASP B . n B 1 17 PHE 17 35 35 PHE PHE B . n B 1 18 GLY 18 36 36 GLY GLY B . n B 1 19 MET 19 37 37 MET MET B . n B 1 20 GLN 20 38 38 GLN GLN B . n B 1 21 LEU 21 39 39 LEU LEU B . n B 1 22 LEU 22 40 40 LEU LEU B . n B 1 23 ALA 23 41 41 ALA ALA B . n B 1 24 TYR 24 42 42 TYR TYR B . n B 1 25 PRO 25 43 43 PRO PRO B . n B 1 26 THR 26 44 44 THR THR B . n B 1 27 ARG 27 45 45 ARG ARG B . n B 1 28 GLY 28 46 46 GLY GLY B . n B 1 29 ARG 29 47 47 ARG ARG B . n B 1 30 THR 30 48 48 THR THR B . n B 1 31 VAL 31 49 49 VAL VAL B . n B 1 32 HIS 32 50 50 HIS HIS B . n B 1 33 PHE 33 51 51 PHE PHE B . n B 1 34 LYS 34 52 52 LYS LYS B . n B 1 35 VAL 35 53 53 VAL VAL B . n B 1 36 LEU 36 54 54 LEU LEU B . n B 1 37 ASP 37 55 55 ASP ASP B . n B 1 38 GLU 38 56 56 GLU GLU B . n B 1 39 PHE 39 57 57 PHE PHE B . n B 1 40 GLY 40 58 58 GLY GLY B . n B 1 41 THR 41 59 59 THR THR B . n B 1 42 ARG 42 60 60 ARG ARG B . n B 1 43 PHE 43 61 61 PHE PHE B . n B 1 44 GLU 44 62 62 GLU GLU B . n B 1 45 VAL 45 63 63 VAL VAL B . n B 1 46 ALA 46 64 64 ALA ALA B . n B 1 47 ASN 47 65 65 ASN ASN B . n B 1 48 CYS 48 66 66 CYS CYS B . n B 1 49 SER 49 67 67 SER SER B . n B 1 50 ILE 50 68 68 ILE ILE B . n B 1 51 CYS 51 69 69 CYS CYS B . n B 1 52 MET 52 70 70 MET MET B . n B 1 53 HIS 53 71 71 HIS HIS B . n B 1 54 TRP 54 72 72 TRP TRP B . n B 1 55 LEU 55 73 73 LEU LEU B . n B 1 56 ASN 56 74 74 ASN ASN B . n B 1 57 THR 57 75 75 THR THR B . n B 1 58 GLY 58 76 76 GLY GLY B . n B 1 59 GLU 59 77 77 GLU GLU B . n B 1 60 ASP 60 78 78 ASP ASP B . n B 1 61 GLY 61 79 79 GLY GLY B . n B 1 62 GLY 62 80 80 GLY GLY B . n B 1 63 LEU 63 81 81 LEU LEU B . n B 1 64 ILE 64 82 82 ILE ILE B . n B 1 65 PHE 65 83 83 PHE PHE B . n B 1 66 SER 66 84 84 SER SER B . n B 1 67 ALA 67 85 85 ALA ALA B . n B 1 68 GLY 68 86 86 GLY GLY B . n B 1 69 TYR 69 87 87 TYR TYR B . n B 1 70 GLU 70 88 88 GLU GLU B . n B 1 71 GLY 71 89 89 GLY GLY B . n B 1 72 CYS 72 90 90 CYS CYS B . n B 1 73 HIS 73 91 91 HIS HIS B . n B 1 74 VAL 74 92 92 VAL VAL B . n B 1 75 LEU 75 93 93 LEU LEU B . n B 1 76 VAL 76 94 94 VAL VAL B . n B 1 77 LYS 77 95 95 LYS LYS B . n B 1 78 ASP 78 96 96 ASP ASP B . n B 1 79 GLY 79 97 97 GLY GLY B . n B 1 80 ARG 80 98 98 ARG ARG B . n B 1 81 TYR 81 99 99 TYR TYR B . n B 1 82 VAL 82 100 100 VAL VAL B . n B 1 83 LEU 83 101 101 LEU LEU B . n B 1 84 ARG 84 102 102 ARG ARG B . n B 1 85 VAL 85 103 103 VAL VAL B . n B 1 86 GLN 86 104 104 GLN GLN B . n B 1 87 LEU 87 105 105 LEU LEU B . n B 1 88 GLU 88 106 106 GLU GLU B . n B 1 89 GLU 89 107 107 GLU GLU B . n B 1 90 MET 90 108 108 MET MET B . n B 1 91 LEU 91 109 109 LEU LEU B . n B 1 92 LEU 92 110 110 LEU LEU B . n B 1 93 SER 93 111 111 SER SER B . n B 1 94 GLY 94 112 112 GLY GLY B . n B 1 95 VAL 95 113 113 VAL VAL B . n B 1 96 VAL 96 114 114 VAL VAL B . n B 1 97 ALA 97 115 115 ALA ALA B . n B 1 98 ALA 98 116 116 ALA ALA B . n B 1 99 SER 99 117 117 SER SER B . n B 1 100 TYR 100 118 118 TYR TYR B . n B 1 101 GLU 101 119 119 GLU GLU B . n B 1 102 VAL 102 120 120 VAL VAL B . n B 1 103 GLN 103 121 121 GLN GLN B . n B 1 104 MET 104 122 122 MET MET B . n B 1 105 THR 105 123 123 THR THR B . n B 1 106 CYS 106 124 124 CYS CYS B . n B 1 107 PRO 107 125 125 PRO PRO B . n B 1 108 ARG 108 126 126 ARG ARG B . n B 1 109 PRO 109 127 127 PRO PRO B . n B 1 110 ALA 110 128 ? ? ? B . n B 1 111 GLY 111 129 ? ? ? B . n B 1 112 TYR 112 130 ? ? ? B . n B 1 113 GLU 113 131 ? ? ? B . n B 1 114 ILE 114 132 ? ? ? B . n B 1 115 LEU 115 133 ? ? ? B . n B 1 116 ARG 116 134 ? ? ? B . n B 1 117 ASP 117 135 ? ? ? B . n B 1 118 GLU 118 136 ? ? ? B . n B 1 119 LYS 119 137 ? ? ? B . n B 1 120 VAL 120 138 ? ? ? B . n B 1 121 HIS 121 139 ? ? ? B . n B 1 122 HIS 122 140 ? ? ? B . n B 1 123 HIS 123 141 ? ? ? B . n B 1 124 HIS 124 142 ? ? ? B . n B 1 125 HIS 125 143 ? ? ? B . n B 1 126 HIS 126 144 ? ? ? B . n B 1 127 HIS 127 145 ? ? ? B . n B 1 128 HIS 128 146 ? ? ? B . n B 1 129 GLN 129 147 ? ? ? B . n B 1 130 ARG 130 148 ? ? ? B . n B 1 131 PRO 131 149 ? ? ? B . n B 1 132 ASP 132 150 ? ? ? B . n B 1 133 ARG 133 151 ? ? ? B . n B 1 134 GLY 134 152 ? ? ? B . n B 1 135 ASN 135 153 ? ? ? B . n B 1 136 SER 136 154 ? ? ? B . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 2 NAG 1 C NAG 1 A NAG 900 n C 2 NAG 2 C NAG 2 A NAG 901 n C 2 FUC 3 C FUC 3 A FUC 902 n D 3 NAG 1 D NAG 1 B NAG 900 n D 3 NAG 2 D NAG 2 B NAG 901 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 MPD 1 204 910 MPD MPD A . F 4 MPD 1 205 911 MPD MPD A . G 4 MPD 1 203 910 MPD MPD B . H 4 MPD 1 204 911 MPD MPD B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? MxCuBE ? ? ? . 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 5 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 6 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6GF8 _cell.details ? _cell.formula_units_Z ? _cell.length_a 90.774 _cell.length_a_esd ? _cell.length_b 125.734 _cell.length_b_esd ? _cell.length_c 105.001 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GF8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6GF8 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.23 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 70.91 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '29% (V/V) MPD, 0.1 M MES PH 6.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-07-17 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9791 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9791 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate 103.69 _reflns.entry_id 6GF8 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.10 _reflns.d_resolution_low 42.74 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11119 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.1 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.093 _reflns.pdbx_Rpim_I_all 0.043 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.00 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.10 _reflns_shell.d_res_low 3.24 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.0 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1328 _reflns_shell.percent_possible_all 96.9 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 4.2 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 1.114 _reflns_shell.pdbx_Rpim_I_all 0.520 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.65 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6GF8 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.100 _refine.ls_d_res_low 24.725 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11079 _refine.ls_number_reflns_R_free 1070 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.01 _refine.ls_percent_reflns_R_free 9.66 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2127 _refine.ls_R_factor_R_free 0.2352 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2104 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'Monomer 6GF6' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.83 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.45 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1638 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 98 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1736 _refine_hist.d_res_high 3.100 _refine_hist.d_res_low 24.725 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 1780 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.657 ? 2412 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 14.859 ? 1026 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.046 ? 270 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 298 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 3.1001 3.2409 . . 122 1197 96.00 . . . 0.3833 . 0.3532 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2409 3.4114 . . 128 1235 99.00 . . . 0.3800 . 0.3315 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4114 3.6245 . . 139 1242 100.00 . . . 0.3226 . 0.2924 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.6245 3.9034 . . 155 1216 99.00 . . . 0.2456 . 0.2245 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.9034 4.2943 . . 120 1266 99.00 . . . 0.2298 . 0.1932 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.2943 4.9115 . . 142 1245 99.00 . . . 0.2039 . 0.1686 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.9115 6.1720 . . 126 1276 99.00 . . . 0.2175 . 0.1975 . . . . . . . . . . 'X-RAY DIFFRACTION' 6.1720 24.7254 . . 138 1332 99.00 . . . 0.2115 . 0.1947 . . . . . . . . . . # _struct.entry_id 6GF8 _struct.title 'Molecular basis of egg coat filament cross-linking: structure of the glycosylated ZP1 ZP-N1 domain homodimer' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6GF8 _struct_keywords.text ;Zona pellucida, ZP1, ZP-N domain, ZP module, ZP domain, egg coat filament cross-linking, egg coat penetration by sperm, cell adhesion ; _struct_keywords.pdbx_keywords 'CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP A0A140JXP0_CHICK A0A140JXP0 ? 1 ;ALLQYHYDCGDFGMQLLAYPTRGRTVHFKVLDEFGTRFEVANCSICMHWLNTGEDGGLIFSAGYEGCHVLVKDGRYVLRV QLEEMLLSGVVAASYEVNMTCPRPAGYEILRDEKVH ; 24 2 UNP A0A140JXP0_CHICK A0A140JXP0 ? 1 HQRPDRGNG 141 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6GF8 A 6 ? 121 ? A0A140JXP0 24 ? 139 ? 24 139 2 2 6GF8 A 128 ? 136 ? A0A140JXP0 141 ? 149 ? 146 154 3 1 6GF8 B 6 ? 121 ? A0A140JXP0 24 ? 139 ? 24 139 4 2 6GF8 B 128 ? 136 ? A0A140JXP0 141 ? 149 ? 146 154 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6GF8 ASP A 1 ? UNP A0A140JXP0 ? ? 'expression tag' 19 1 1 6GF8 ALA A 2 ? UNP A0A140JXP0 ? ? 'expression tag' 20 2 1 6GF8 ALA A 3 ? UNP A0A140JXP0 ? ? 'expression tag' 21 3 1 6GF8 GLN A 4 ? UNP A0A140JXP0 ? ? 'expression tag' 22 4 1 6GF8 PRO A 5 ? UNP A0A140JXP0 ? ? 'expression tag' 23 5 1 6GF8 GLN A 103 ? UNP A0A140JXP0 ASN 121 'engineered mutation' 121 6 1 6GF8 HIS A 122 ? UNP A0A140JXP0 ? ? 'expression tag' 140 7 1 6GF8 HIS A 123 ? UNP A0A140JXP0 ? ? 'expression tag' 141 8 1 6GF8 HIS A 124 ? UNP A0A140JXP0 ? ? 'expression tag' 142 9 1 6GF8 HIS A 125 ? UNP A0A140JXP0 ? ? 'expression tag' 143 10 1 6GF8 HIS A 126 ? UNP A0A140JXP0 ? ? 'expression tag' 144 11 1 6GF8 HIS A 127 ? UNP A0A140JXP0 ? ? 'expression tag' 145 12 2 6GF8 SER A 136 ? UNP A0A140JXP0 GLY 149 'engineered mutation' 154 13 3 6GF8 ASP B 1 ? UNP A0A140JXP0 ? ? 'expression tag' 19 14 3 6GF8 ALA B 2 ? UNP A0A140JXP0 ? ? 'expression tag' 20 15 3 6GF8 ALA B 3 ? UNP A0A140JXP0 ? ? 'expression tag' 21 16 3 6GF8 GLN B 4 ? UNP A0A140JXP0 ? ? 'expression tag' 22 17 3 6GF8 PRO B 5 ? UNP A0A140JXP0 ? ? 'expression tag' 23 18 3 6GF8 GLN B 103 ? UNP A0A140JXP0 ASN 121 'engineered mutation' 121 19 3 6GF8 HIS B 122 ? UNP A0A140JXP0 ? ? 'expression tag' 140 20 3 6GF8 HIS B 123 ? UNP A0A140JXP0 ? ? 'expression tag' 141 21 3 6GF8 HIS B 124 ? UNP A0A140JXP0 ? ? 'expression tag' 142 22 3 6GF8 HIS B 125 ? UNP A0A140JXP0 ? ? 'expression tag' 143 23 3 6GF8 HIS B 126 ? UNP A0A140JXP0 ? ? 'expression tag' 144 24 3 6GF8 HIS B 127 ? UNP A0A140JXP0 ? ? 'expression tag' 145 25 4 6GF8 SER B 136 ? UNP A0A140JXP0 GLY 149 'engineered mutation' 154 26 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3560 ? 1 MORE -38 ? 1 'SSA (A^2)' 11950 ? 2 'ABSA (A^2)' 2960 ? 2 MORE -39 ? 2 'SSA (A^2)' 12260 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,3 A,C,E,F 2 1,2 B,D,G,H # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 cross-linking 'Dimer in non-reducing SDS-PAGE' 2 1 'gel filtration' ? 3 2 cross-linking 'Dimer in non-reducing SDS-PAGE' 4 2 'gel filtration' ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -52.5005000000 3 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 14 SG ? ? ? 1_555 A CYS 106 SG ? ? A CYS 32 A CYS 124 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf2 disulf ? ? A CYS 48 SG ? ? ? 1_555 A CYS 48 SG ? ? A CYS 66 A CYS 66 4_555 ? ? ? ? ? ? ? 2.025 ? ? disulf3 disulf ? ? A CYS 51 SG ? ? ? 1_555 A CYS 72 SG ? ? A CYS 69 A CYS 90 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf4 disulf ? ? B CYS 14 SG ? ? ? 1_555 B CYS 106 SG ? ? B CYS 32 B CYS 124 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf5 disulf ? ? B CYS 48 SG ? ? ? 1_555 B CYS 48 SG ? ? B CYS 66 B CYS 66 3_554 ? ? ? ? ? ? ? 2.042 ? ? disulf6 disulf ? ? B CYS 51 SG ? ? ? 1_555 B CYS 72 SG ? ? B CYS 69 B CYS 90 1_555 ? ? ? ? ? ? ? 2.040 ? ? covale1 covale one ? A ASN 47 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 65 C NAG 1 1_555 ? ? ? ? ? ? ? 1.449 ? N-Glycosylation covale2 covale one ? B ASN 47 ND2 ? ? ? 1_555 D NAG . C1 ? ? B ASN 65 D NAG 1 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale3 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.389 ? ? covale4 covale both ? C NAG . O6 ? ? ? 1_555 C FUC . C1 ? ? C NAG 1 C FUC 3 1_555 ? ? ? ? ? ? ? 1.412 ? ? covale5 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.389 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 CYS 106 A . ? CYS 124 A PRO 107 A ? PRO 125 A 1 -5.61 2 ARG 108 A . ? ARG 126 A PRO 109 A ? PRO 127 A 1 -3.77 3 CYS 106 B . ? CYS 124 B PRO 107 B ? PRO 125 B 1 -5.46 4 ARG 108 B . ? ARG 126 B PRO 109 B ? PRO 127 B 1 -3.71 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? AA3 ? 4 ? AA4 ? 4 ? AA5 ? 4 ? AA6 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 9 ? CYS A 14 ? GLN A 27 CYS A 32 AA1 2 GLY A 18 ? TYR A 24 ? GLY A 36 TYR A 42 AA1 3 LEU A 63 ? GLY A 68 ? LEU A 81 GLY A 86 AA1 4 HIS A 53 ? THR A 57 ? HIS A 71 THR A 75 AA2 1 ARG A 42 ? GLU A 44 ? ARG A 60 GLU A 62 AA2 2 THR A 30 ? LEU A 36 ? THR A 48 LEU A 54 AA2 3 ARG A 80 ? MET A 90 ? ARG A 98 MET A 108 AA2 4 LEU A 75 ? LYS A 77 ? LEU A 93 LYS A 95 AA3 1 ARG A 42 ? GLU A 44 ? ARG A 60 GLU A 62 AA3 2 THR A 30 ? LEU A 36 ? THR A 48 LEU A 54 AA3 3 ARG A 80 ? MET A 90 ? ARG A 98 MET A 108 AA3 4 VAL A 96 ? CYS A 106 ? VAL A 114 CYS A 124 AA4 1 GLN B 9 ? CYS B 14 ? GLN B 27 CYS B 32 AA4 2 GLY B 18 ? TYR B 24 ? GLY B 36 TYR B 42 AA4 3 LEU B 63 ? GLY B 68 ? LEU B 81 GLY B 86 AA4 4 HIS B 53 ? THR B 57 ? HIS B 71 THR B 75 AA5 1 ARG B 42 ? GLU B 44 ? ARG B 60 GLU B 62 AA5 2 THR B 30 ? LEU B 36 ? THR B 48 LEU B 54 AA5 3 ARG B 80 ? MET B 90 ? ARG B 98 MET B 108 AA5 4 LEU B 75 ? LYS B 77 ? LEU B 93 LYS B 95 AA6 1 ARG B 42 ? GLU B 44 ? ARG B 60 GLU B 62 AA6 2 THR B 30 ? LEU B 36 ? THR B 48 LEU B 54 AA6 3 ARG B 80 ? MET B 90 ? ARG B 98 MET B 108 AA6 4 VAL B 96 ? CYS B 106 ? VAL B 114 CYS B 124 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN A 9 ? N GLN A 27 O TYR A 24 ? O TYR A 42 AA1 2 3 N MET A 19 ? N MET A 37 O ALA A 67 ? O ALA A 85 AA1 3 4 O ILE A 64 ? O ILE A 82 N ASN A 56 ? N ASN A 74 AA2 1 2 O PHE A 43 ? O PHE A 61 N VAL A 35 ? N VAL A 53 AA2 2 3 N LYS A 34 ? N LYS A 52 O GLN A 86 ? O GLN A 104 AA2 3 4 O VAL A 82 ? O VAL A 100 N LEU A 75 ? N LEU A 93 AA3 1 2 O PHE A 43 ? O PHE A 61 N VAL A 35 ? N VAL A 53 AA3 2 3 N LYS A 34 ? N LYS A 52 O GLN A 86 ? O GLN A 104 AA3 3 4 N LEU A 87 ? N LEU A 105 O TYR A 100 ? O TYR A 118 AA4 1 2 N HIS B 11 ? N HIS B 29 O LEU B 22 ? O LEU B 40 AA4 2 3 N MET B 19 ? N MET B 37 O ALA B 67 ? O ALA B 85 AA4 3 4 O ILE B 64 ? O ILE B 82 N ASN B 56 ? N ASN B 74 AA5 1 2 O PHE B 43 ? O PHE B 61 N VAL B 35 ? N VAL B 53 AA5 2 3 N LYS B 34 ? N LYS B 52 O GLN B 86 ? O GLN B 104 AA5 3 4 O VAL B 82 ? O VAL B 100 N LEU B 75 ? N LEU B 93 AA6 1 2 O PHE B 43 ? O PHE B 61 N VAL B 35 ? N VAL B 53 AA6 2 3 N LYS B 34 ? N LYS B 52 O GLN B 86 ? O GLN B 104 AA6 3 4 N LEU B 83 ? N LEU B 101 O MET B 104 ? O MET B 122 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O4 _pdbx_validate_close_contact.auth_asym_id_1 C _pdbx_validate_close_contact.auth_comp_id_1 NAG _pdbx_validate_close_contact.auth_seq_id_1 1 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O5 _pdbx_validate_close_contact.auth_asym_id_2 C _pdbx_validate_close_contact.auth_comp_id_2 NAG _pdbx_validate_close_contact.auth_seq_id_2 2 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.03 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 25.8626 5.4361 -13.3653 1.2428 1.2323 1.2921 -0.2496 -0.0139 0.0102 4.8727 8.9179 8.3884 2.8667 0.0144 0.9841 -0.5724 0.3240 -0.4615 -1.2970 0.3373 0.2925 -0.1987 -0.0805 0.0001 'X-RAY DIFFRACTION' 2 ? refined 4.4766 -26.5701 -12.9753 1.2754 1.2204 1.1449 -0.2119 0.0101 -0.0057 5.9327 4.0815 7.1640 1.8380 0.1161 0.4063 0.4189 -0.9984 0.0580 0.4551 -0.3845 -0.0334 -0.2017 0.1908 -0.0002 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'chain A and (resi 25:127 or resi 201:203)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'chain B and (resi 23:127 or resi 201:203)' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 19 ? A ASP 1 2 1 Y 1 A ALA 20 ? A ALA 2 3 1 Y 1 A ALA 21 ? A ALA 3 4 1 Y 1 A GLN 22 ? A GLN 4 5 1 Y 1 A PRO 23 ? A PRO 5 6 1 Y 1 A ALA 24 ? A ALA 6 7 1 Y 1 A ALA 128 ? A ALA 110 8 1 Y 1 A GLY 129 ? A GLY 111 9 1 Y 1 A TYR 130 ? A TYR 112 10 1 Y 1 A GLU 131 ? A GLU 113 11 1 Y 1 A ILE 132 ? A ILE 114 12 1 Y 1 A LEU 133 ? A LEU 115 13 1 Y 1 A ARG 134 ? A ARG 116 14 1 Y 1 A ASP 135 ? A ASP 117 15 1 Y 1 A GLU 136 ? A GLU 118 16 1 Y 1 A LYS 137 ? A LYS 119 17 1 Y 1 A VAL 138 ? A VAL 120 18 1 Y 1 A HIS 139 ? A HIS 121 19 1 Y 1 A HIS 140 ? A HIS 122 20 1 Y 1 A HIS 141 ? A HIS 123 21 1 Y 1 A HIS 142 ? A HIS 124 22 1 Y 1 A HIS 143 ? A HIS 125 23 1 Y 1 A HIS 144 ? A HIS 126 24 1 Y 1 A HIS 145 ? A HIS 127 25 1 Y 1 A HIS 146 ? A HIS 128 26 1 Y 1 A GLN 147 ? A GLN 129 27 1 Y 1 A ARG 148 ? A ARG 130 28 1 Y 1 A PRO 149 ? A PRO 131 29 1 Y 1 A ASP 150 ? A ASP 132 30 1 Y 1 A ARG 151 ? A ARG 133 31 1 Y 1 A GLY 152 ? A GLY 134 32 1 Y 1 A ASN 153 ? A ASN 135 33 1 Y 1 A SER 154 ? A SER 136 34 1 Y 1 B ASP 19 ? B ASP 1 35 1 Y 1 B ALA 20 ? B ALA 2 36 1 Y 1 B ALA 21 ? B ALA 3 37 1 Y 1 B GLN 22 ? B GLN 4 38 1 Y 1 B ALA 128 ? B ALA 110 39 1 Y 1 B GLY 129 ? B GLY 111 40 1 Y 1 B TYR 130 ? B TYR 112 41 1 Y 1 B GLU 131 ? B GLU 113 42 1 Y 1 B ILE 132 ? B ILE 114 43 1 Y 1 B LEU 133 ? B LEU 115 44 1 Y 1 B ARG 134 ? B ARG 116 45 1 Y 1 B ASP 135 ? B ASP 117 46 1 Y 1 B GLU 136 ? B GLU 118 47 1 Y 1 B LYS 137 ? B LYS 119 48 1 Y 1 B VAL 138 ? B VAL 120 49 1 Y 1 B HIS 139 ? B HIS 121 50 1 Y 1 B HIS 140 ? B HIS 122 51 1 Y 1 B HIS 141 ? B HIS 123 52 1 Y 1 B HIS 142 ? B HIS 124 53 1 Y 1 B HIS 143 ? B HIS 125 54 1 Y 1 B HIS 144 ? B HIS 126 55 1 Y 1 B HIS 145 ? B HIS 127 56 1 Y 1 B HIS 146 ? B HIS 128 57 1 Y 1 B GLN 147 ? B GLN 129 58 1 Y 1 B ARG 148 ? B ARG 130 59 1 Y 1 B PRO 149 ? B PRO 131 60 1 Y 1 B ASP 150 ? B ASP 132 61 1 Y 1 B ARG 151 ? B ARG 133 62 1 Y 1 B GLY 152 ? B GLY 134 63 1 Y 1 B ASN 153 ? B ASN 135 64 1 Y 1 B SER 154 ? B SER 136 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FUC C1 C N R 88 FUC C2 C N S 89 FUC C3 C N R 90 FUC C4 C N S 91 FUC C5 C N S 92 FUC C6 C N N 93 FUC O1 O N N 94 FUC O2 O N N 95 FUC O3 O N N 96 FUC O4 O N N 97 FUC O5 O N N 98 FUC H1 H N N 99 FUC H2 H N N 100 FUC H3 H N N 101 FUC H4 H N N 102 FUC H5 H N N 103 FUC H61 H N N 104 FUC H62 H N N 105 FUC H63 H N N 106 FUC HO1 H N N 107 FUC HO2 H N N 108 FUC HO3 H N N 109 FUC HO4 H N N 110 GLN N N N N 111 GLN CA C N S 112 GLN C C N N 113 GLN O O N N 114 GLN CB C N N 115 GLN CG C N N 116 GLN CD C N N 117 GLN OE1 O N N 118 GLN NE2 N N N 119 GLN OXT O N N 120 GLN H H N N 121 GLN H2 H N N 122 GLN HA H N N 123 GLN HB2 H N N 124 GLN HB3 H N N 125 GLN HG2 H N N 126 GLN HG3 H N N 127 GLN HE21 H N N 128 GLN HE22 H N N 129 GLN HXT H N N 130 GLU N N N N 131 GLU CA C N S 132 GLU C C N N 133 GLU O O N N 134 GLU CB C N N 135 GLU CG C N N 136 GLU CD C N N 137 GLU OE1 O N N 138 GLU OE2 O N N 139 GLU OXT O N N 140 GLU H H N N 141 GLU H2 H N N 142 GLU HA H N N 143 GLU HB2 H N N 144 GLU HB3 H N N 145 GLU HG2 H N N 146 GLU HG3 H N N 147 GLU HE2 H N N 148 GLU HXT H N N 149 GLY N N N N 150 GLY CA C N N 151 GLY C C N N 152 GLY O O N N 153 GLY OXT O N N 154 GLY H H N N 155 GLY H2 H N N 156 GLY HA2 H N N 157 GLY HA3 H N N 158 GLY HXT H N N 159 HIS N N N N 160 HIS CA C N S 161 HIS C C N N 162 HIS O O N N 163 HIS CB C N N 164 HIS CG C Y N 165 HIS ND1 N Y N 166 HIS CD2 C Y N 167 HIS CE1 C Y N 168 HIS NE2 N Y N 169 HIS OXT O N N 170 HIS H H N N 171 HIS H2 H N N 172 HIS HA H N N 173 HIS HB2 H N N 174 HIS HB3 H N N 175 HIS HD1 H N N 176 HIS HD2 H N N 177 HIS HE1 H N N 178 HIS HE2 H N N 179 HIS HXT H N N 180 ILE N N N N 181 ILE CA C N S 182 ILE C C N N 183 ILE O O N N 184 ILE CB C N S 185 ILE CG1 C N N 186 ILE CG2 C N N 187 ILE CD1 C N N 188 ILE OXT O N N 189 ILE H H N N 190 ILE H2 H N N 191 ILE HA H N N 192 ILE HB H N N 193 ILE HG12 H N N 194 ILE HG13 H N N 195 ILE HG21 H N N 196 ILE HG22 H N N 197 ILE HG23 H N N 198 ILE HD11 H N N 199 ILE HD12 H N N 200 ILE HD13 H N N 201 ILE HXT H N N 202 LEU N N N N 203 LEU CA C N S 204 LEU C C N N 205 LEU O O N N 206 LEU CB C N N 207 LEU CG C N N 208 LEU CD1 C N N 209 LEU CD2 C N N 210 LEU OXT O N N 211 LEU H H N N 212 LEU H2 H N N 213 LEU HA H N N 214 LEU HB2 H N N 215 LEU HB3 H N N 216 LEU HG H N N 217 LEU HD11 H N N 218 LEU HD12 H N N 219 LEU HD13 H N N 220 LEU HD21 H N N 221 LEU HD22 H N N 222 LEU HD23 H N N 223 LEU HXT H N N 224 LYS N N N N 225 LYS CA C N S 226 LYS C C N N 227 LYS O O N N 228 LYS CB C N N 229 LYS CG C N N 230 LYS CD C N N 231 LYS CE C N N 232 LYS NZ N N N 233 LYS OXT O N N 234 LYS H H N N 235 LYS H2 H N N 236 LYS HA H N N 237 LYS HB2 H N N 238 LYS HB3 H N N 239 LYS HG2 H N N 240 LYS HG3 H N N 241 LYS HD2 H N N 242 LYS HD3 H N N 243 LYS HE2 H N N 244 LYS HE3 H N N 245 LYS HZ1 H N N 246 LYS HZ2 H N N 247 LYS HZ3 H N N 248 LYS HXT H N N 249 MET N N N N 250 MET CA C N S 251 MET C C N N 252 MET O O N N 253 MET CB C N N 254 MET CG C N N 255 MET SD S N N 256 MET CE C N N 257 MET OXT O N N 258 MET H H N N 259 MET H2 H N N 260 MET HA H N N 261 MET HB2 H N N 262 MET HB3 H N N 263 MET HG2 H N N 264 MET HG3 H N N 265 MET HE1 H N N 266 MET HE2 H N N 267 MET HE3 H N N 268 MET HXT H N N 269 MPD C1 C N N 270 MPD C2 C N N 271 MPD O2 O N N 272 MPD CM C N N 273 MPD C3 C N N 274 MPD C4 C N S 275 MPD O4 O N N 276 MPD C5 C N N 277 MPD H11 H N N 278 MPD H12 H N N 279 MPD H13 H N N 280 MPD HO2 H N N 281 MPD HM1 H N N 282 MPD HM2 H N N 283 MPD HM3 H N N 284 MPD H31 H N N 285 MPD H32 H N N 286 MPD H4 H N N 287 MPD HO4 H N N 288 MPD H51 H N N 289 MPD H52 H N N 290 MPD H53 H N N 291 NAG C1 C N R 292 NAG C2 C N R 293 NAG C3 C N R 294 NAG C4 C N S 295 NAG C5 C N R 296 NAG C6 C N N 297 NAG C7 C N N 298 NAG C8 C N N 299 NAG N2 N N N 300 NAG O1 O N N 301 NAG O3 O N N 302 NAG O4 O N N 303 NAG O5 O N N 304 NAG O6 O N N 305 NAG O7 O N N 306 NAG H1 H N N 307 NAG H2 H N N 308 NAG H3 H N N 309 NAG H4 H N N 310 NAG H5 H N N 311 NAG H61 H N N 312 NAG H62 H N N 313 NAG H81 H N N 314 NAG H82 H N N 315 NAG H83 H N N 316 NAG HN2 H N N 317 NAG HO1 H N N 318 NAG HO3 H N N 319 NAG HO4 H N N 320 NAG HO6 H N N 321 PHE N N N N 322 PHE CA C N S 323 PHE C C N N 324 PHE O O N N 325 PHE CB C N N 326 PHE CG C Y N 327 PHE CD1 C Y N 328 PHE CD2 C Y N 329 PHE CE1 C Y N 330 PHE CE2 C Y N 331 PHE CZ C Y N 332 PHE OXT O N N 333 PHE H H N N 334 PHE H2 H N N 335 PHE HA H N N 336 PHE HB2 H N N 337 PHE HB3 H N N 338 PHE HD1 H N N 339 PHE HD2 H N N 340 PHE HE1 H N N 341 PHE HE2 H N N 342 PHE HZ H N N 343 PHE HXT H N N 344 PRO N N N N 345 PRO CA C N S 346 PRO C C N N 347 PRO O O N N 348 PRO CB C N N 349 PRO CG C N N 350 PRO CD C N N 351 PRO OXT O N N 352 PRO H H N N 353 PRO HA H N N 354 PRO HB2 H N N 355 PRO HB3 H N N 356 PRO HG2 H N N 357 PRO HG3 H N N 358 PRO HD2 H N N 359 PRO HD3 H N N 360 PRO HXT H N N 361 SER N N N N 362 SER CA C N S 363 SER C C N N 364 SER O O N N 365 SER CB C N N 366 SER OG O N N 367 SER OXT O N N 368 SER H H N N 369 SER H2 H N N 370 SER HA H N N 371 SER HB2 H N N 372 SER HB3 H N N 373 SER HG H N N 374 SER HXT H N N 375 THR N N N N 376 THR CA C N S 377 THR C C N N 378 THR O O N N 379 THR CB C N R 380 THR OG1 O N N 381 THR CG2 C N N 382 THR OXT O N N 383 THR H H N N 384 THR H2 H N N 385 THR HA H N N 386 THR HB H N N 387 THR HG1 H N N 388 THR HG21 H N N 389 THR HG22 H N N 390 THR HG23 H N N 391 THR HXT H N N 392 TRP N N N N 393 TRP CA C N S 394 TRP C C N N 395 TRP O O N N 396 TRP CB C N N 397 TRP CG C Y N 398 TRP CD1 C Y N 399 TRP CD2 C Y N 400 TRP NE1 N Y N 401 TRP CE2 C Y N 402 TRP CE3 C Y N 403 TRP CZ2 C Y N 404 TRP CZ3 C Y N 405 TRP CH2 C Y N 406 TRP OXT O N N 407 TRP H H N N 408 TRP H2 H N N 409 TRP HA H N N 410 TRP HB2 H N N 411 TRP HB3 H N N 412 TRP HD1 H N N 413 TRP HE1 H N N 414 TRP HE3 H N N 415 TRP HZ2 H N N 416 TRP HZ3 H N N 417 TRP HH2 H N N 418 TRP HXT H N N 419 TYR N N N N 420 TYR CA C N S 421 TYR C C N N 422 TYR O O N N 423 TYR CB C N N 424 TYR CG C Y N 425 TYR CD1 C Y N 426 TYR CD2 C Y N 427 TYR CE1 C Y N 428 TYR CE2 C Y N 429 TYR CZ C Y N 430 TYR OH O N N 431 TYR OXT O N N 432 TYR H H N N 433 TYR H2 H N N 434 TYR HA H N N 435 TYR HB2 H N N 436 TYR HB3 H N N 437 TYR HD1 H N N 438 TYR HD2 H N N 439 TYR HE1 H N N 440 TYR HE2 H N N 441 TYR HH H N N 442 TYR HXT H N N 443 VAL N N N N 444 VAL CA C N S 445 VAL C C N N 446 VAL O O N N 447 VAL CB C N N 448 VAL CG1 C N N 449 VAL CG2 C N N 450 VAL OXT O N N 451 VAL H H N N 452 VAL H2 H N N 453 VAL HA H N N 454 VAL HB H N N 455 VAL HG11 H N N 456 VAL HG12 H N N 457 VAL HG13 H N N 458 VAL HG21 H N N 459 VAL HG22 H N N 460 VAL HG23 H N N 461 VAL HXT H N N 462 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FUC C1 C2 sing N N 83 FUC C1 O1 sing N N 84 FUC C1 O5 sing N N 85 FUC C1 H1 sing N N 86 FUC C2 C3 sing N N 87 FUC C2 O2 sing N N 88 FUC C2 H2 sing N N 89 FUC C3 C4 sing N N 90 FUC C3 O3 sing N N 91 FUC C3 H3 sing N N 92 FUC C4 C5 sing N N 93 FUC C4 O4 sing N N 94 FUC C4 H4 sing N N 95 FUC C5 C6 sing N N 96 FUC C5 O5 sing N N 97 FUC C5 H5 sing N N 98 FUC C6 H61 sing N N 99 FUC C6 H62 sing N N 100 FUC C6 H63 sing N N 101 FUC O1 HO1 sing N N 102 FUC O2 HO2 sing N N 103 FUC O3 HO3 sing N N 104 FUC O4 HO4 sing N N 105 GLN N CA sing N N 106 GLN N H sing N N 107 GLN N H2 sing N N 108 GLN CA C sing N N 109 GLN CA CB sing N N 110 GLN CA HA sing N N 111 GLN C O doub N N 112 GLN C OXT sing N N 113 GLN CB CG sing N N 114 GLN CB HB2 sing N N 115 GLN CB HB3 sing N N 116 GLN CG CD sing N N 117 GLN CG HG2 sing N N 118 GLN CG HG3 sing N N 119 GLN CD OE1 doub N N 120 GLN CD NE2 sing N N 121 GLN NE2 HE21 sing N N 122 GLN NE2 HE22 sing N N 123 GLN OXT HXT sing N N 124 GLU N CA sing N N 125 GLU N H sing N N 126 GLU N H2 sing N N 127 GLU CA C sing N N 128 GLU CA CB sing N N 129 GLU CA HA sing N N 130 GLU C O doub N N 131 GLU C OXT sing N N 132 GLU CB CG sing N N 133 GLU CB HB2 sing N N 134 GLU CB HB3 sing N N 135 GLU CG CD sing N N 136 GLU CG HG2 sing N N 137 GLU CG HG3 sing N N 138 GLU CD OE1 doub N N 139 GLU CD OE2 sing N N 140 GLU OE2 HE2 sing N N 141 GLU OXT HXT sing N N 142 GLY N CA sing N N 143 GLY N H sing N N 144 GLY N H2 sing N N 145 GLY CA C sing N N 146 GLY CA HA2 sing N N 147 GLY CA HA3 sing N N 148 GLY C O doub N N 149 GLY C OXT sing N N 150 GLY OXT HXT sing N N 151 HIS N CA sing N N 152 HIS N H sing N N 153 HIS N H2 sing N N 154 HIS CA C sing N N 155 HIS CA CB sing N N 156 HIS CA HA sing N N 157 HIS C O doub N N 158 HIS C OXT sing N N 159 HIS CB CG sing N N 160 HIS CB HB2 sing N N 161 HIS CB HB3 sing N N 162 HIS CG ND1 sing Y N 163 HIS CG CD2 doub Y N 164 HIS ND1 CE1 doub Y N 165 HIS ND1 HD1 sing N N 166 HIS CD2 NE2 sing Y N 167 HIS CD2 HD2 sing N N 168 HIS CE1 NE2 sing Y N 169 HIS CE1 HE1 sing N N 170 HIS NE2 HE2 sing N N 171 HIS OXT HXT sing N N 172 ILE N CA sing N N 173 ILE N H sing N N 174 ILE N H2 sing N N 175 ILE CA C sing N N 176 ILE CA CB sing N N 177 ILE CA HA sing N N 178 ILE C O doub N N 179 ILE C OXT sing N N 180 ILE CB CG1 sing N N 181 ILE CB CG2 sing N N 182 ILE CB HB sing N N 183 ILE CG1 CD1 sing N N 184 ILE CG1 HG12 sing N N 185 ILE CG1 HG13 sing N N 186 ILE CG2 HG21 sing N N 187 ILE CG2 HG22 sing N N 188 ILE CG2 HG23 sing N N 189 ILE CD1 HD11 sing N N 190 ILE CD1 HD12 sing N N 191 ILE CD1 HD13 sing N N 192 ILE OXT HXT sing N N 193 LEU N CA sing N N 194 LEU N H sing N N 195 LEU N H2 sing N N 196 LEU CA C sing N N 197 LEU CA CB sing N N 198 LEU CA HA sing N N 199 LEU C O doub N N 200 LEU C OXT sing N N 201 LEU CB CG sing N N 202 LEU CB HB2 sing N N 203 LEU CB HB3 sing N N 204 LEU CG CD1 sing N N 205 LEU CG CD2 sing N N 206 LEU CG HG sing N N 207 LEU CD1 HD11 sing N N 208 LEU CD1 HD12 sing N N 209 LEU CD1 HD13 sing N N 210 LEU CD2 HD21 sing N N 211 LEU CD2 HD22 sing N N 212 LEU CD2 HD23 sing N N 213 LEU OXT HXT sing N N 214 LYS N CA sing N N 215 LYS N H sing N N 216 LYS N H2 sing N N 217 LYS CA C sing N N 218 LYS CA CB sing N N 219 LYS CA HA sing N N 220 LYS C O doub N N 221 LYS C OXT sing N N 222 LYS CB CG sing N N 223 LYS CB HB2 sing N N 224 LYS CB HB3 sing N N 225 LYS CG CD sing N N 226 LYS CG HG2 sing N N 227 LYS CG HG3 sing N N 228 LYS CD CE sing N N 229 LYS CD HD2 sing N N 230 LYS CD HD3 sing N N 231 LYS CE NZ sing N N 232 LYS CE HE2 sing N N 233 LYS CE HE3 sing N N 234 LYS NZ HZ1 sing N N 235 LYS NZ HZ2 sing N N 236 LYS NZ HZ3 sing N N 237 LYS OXT HXT sing N N 238 MET N CA sing N N 239 MET N H sing N N 240 MET N H2 sing N N 241 MET CA C sing N N 242 MET CA CB sing N N 243 MET CA HA sing N N 244 MET C O doub N N 245 MET C OXT sing N N 246 MET CB CG sing N N 247 MET CB HB2 sing N N 248 MET CB HB3 sing N N 249 MET CG SD sing N N 250 MET CG HG2 sing N N 251 MET CG HG3 sing N N 252 MET SD CE sing N N 253 MET CE HE1 sing N N 254 MET CE HE2 sing N N 255 MET CE HE3 sing N N 256 MET OXT HXT sing N N 257 MPD C1 C2 sing N N 258 MPD C1 H11 sing N N 259 MPD C1 H12 sing N N 260 MPD C1 H13 sing N N 261 MPD C2 O2 sing N N 262 MPD C2 CM sing N N 263 MPD C2 C3 sing N N 264 MPD O2 HO2 sing N N 265 MPD CM HM1 sing N N 266 MPD CM HM2 sing N N 267 MPD CM HM3 sing N N 268 MPD C3 C4 sing N N 269 MPD C3 H31 sing N N 270 MPD C3 H32 sing N N 271 MPD C4 O4 sing N N 272 MPD C4 C5 sing N N 273 MPD C4 H4 sing N N 274 MPD O4 HO4 sing N N 275 MPD C5 H51 sing N N 276 MPD C5 H52 sing N N 277 MPD C5 H53 sing N N 278 NAG C1 C2 sing N N 279 NAG C1 O1 sing N N 280 NAG C1 O5 sing N N 281 NAG C1 H1 sing N N 282 NAG C2 C3 sing N N 283 NAG C2 N2 sing N N 284 NAG C2 H2 sing N N 285 NAG C3 C4 sing N N 286 NAG C3 O3 sing N N 287 NAG C3 H3 sing N N 288 NAG C4 C5 sing N N 289 NAG C4 O4 sing N N 290 NAG C4 H4 sing N N 291 NAG C5 C6 sing N N 292 NAG C5 O5 sing N N 293 NAG C5 H5 sing N N 294 NAG C6 O6 sing N N 295 NAG C6 H61 sing N N 296 NAG C6 H62 sing N N 297 NAG C7 C8 sing N N 298 NAG C7 N2 sing N N 299 NAG C7 O7 doub N N 300 NAG C8 H81 sing N N 301 NAG C8 H82 sing N N 302 NAG C8 H83 sing N N 303 NAG N2 HN2 sing N N 304 NAG O1 HO1 sing N N 305 NAG O3 HO3 sing N N 306 NAG O4 HO4 sing N N 307 NAG O6 HO6 sing N N 308 PHE N CA sing N N 309 PHE N H sing N N 310 PHE N H2 sing N N 311 PHE CA C sing N N 312 PHE CA CB sing N N 313 PHE CA HA sing N N 314 PHE C O doub N N 315 PHE C OXT sing N N 316 PHE CB CG sing N N 317 PHE CB HB2 sing N N 318 PHE CB HB3 sing N N 319 PHE CG CD1 doub Y N 320 PHE CG CD2 sing Y N 321 PHE CD1 CE1 sing Y N 322 PHE CD1 HD1 sing N N 323 PHE CD2 CE2 doub Y N 324 PHE CD2 HD2 sing N N 325 PHE CE1 CZ doub Y N 326 PHE CE1 HE1 sing N N 327 PHE CE2 CZ sing Y N 328 PHE CE2 HE2 sing N N 329 PHE CZ HZ sing N N 330 PHE OXT HXT sing N N 331 PRO N CA sing N N 332 PRO N CD sing N N 333 PRO N H sing N N 334 PRO CA C sing N N 335 PRO CA CB sing N N 336 PRO CA HA sing N N 337 PRO C O doub N N 338 PRO C OXT sing N N 339 PRO CB CG sing N N 340 PRO CB HB2 sing N N 341 PRO CB HB3 sing N N 342 PRO CG CD sing N N 343 PRO CG HG2 sing N N 344 PRO CG HG3 sing N N 345 PRO CD HD2 sing N N 346 PRO CD HD3 sing N N 347 PRO OXT HXT sing N N 348 SER N CA sing N N 349 SER N H sing N N 350 SER N H2 sing N N 351 SER CA C sing N N 352 SER CA CB sing N N 353 SER CA HA sing N N 354 SER C O doub N N 355 SER C OXT sing N N 356 SER CB OG sing N N 357 SER CB HB2 sing N N 358 SER CB HB3 sing N N 359 SER OG HG sing N N 360 SER OXT HXT sing N N 361 THR N CA sing N N 362 THR N H sing N N 363 THR N H2 sing N N 364 THR CA C sing N N 365 THR CA CB sing N N 366 THR CA HA sing N N 367 THR C O doub N N 368 THR C OXT sing N N 369 THR CB OG1 sing N N 370 THR CB CG2 sing N N 371 THR CB HB sing N N 372 THR OG1 HG1 sing N N 373 THR CG2 HG21 sing N N 374 THR CG2 HG22 sing N N 375 THR CG2 HG23 sing N N 376 THR OXT HXT sing N N 377 TRP N CA sing N N 378 TRP N H sing N N 379 TRP N H2 sing N N 380 TRP CA C sing N N 381 TRP CA CB sing N N 382 TRP CA HA sing N N 383 TRP C O doub N N 384 TRP C OXT sing N N 385 TRP CB CG sing N N 386 TRP CB HB2 sing N N 387 TRP CB HB3 sing N N 388 TRP CG CD1 doub Y N 389 TRP CG CD2 sing Y N 390 TRP CD1 NE1 sing Y N 391 TRP CD1 HD1 sing N N 392 TRP CD2 CE2 doub Y N 393 TRP CD2 CE3 sing Y N 394 TRP NE1 CE2 sing Y N 395 TRP NE1 HE1 sing N N 396 TRP CE2 CZ2 sing Y N 397 TRP CE3 CZ3 doub Y N 398 TRP CE3 HE3 sing N N 399 TRP CZ2 CH2 doub Y N 400 TRP CZ2 HZ2 sing N N 401 TRP CZ3 CH2 sing Y N 402 TRP CZ3 HZ3 sing N N 403 TRP CH2 HH2 sing N N 404 TRP OXT HXT sing N N 405 TYR N CA sing N N 406 TYR N H sing N N 407 TYR N H2 sing N N 408 TYR CA C sing N N 409 TYR CA CB sing N N 410 TYR CA HA sing N N 411 TYR C O doub N N 412 TYR C OXT sing N N 413 TYR CB CG sing N N 414 TYR CB HB2 sing N N 415 TYR CB HB3 sing N N 416 TYR CG CD1 doub Y N 417 TYR CG CD2 sing Y N 418 TYR CD1 CE1 sing Y N 419 TYR CD1 HD1 sing N N 420 TYR CD2 CE2 doub Y N 421 TYR CD2 HD2 sing N N 422 TYR CE1 CZ doub Y N 423 TYR CE1 HE1 sing N N 424 TYR CE2 CZ sing Y N 425 TYR CE2 HE2 sing N N 426 TYR CZ OH sing N N 427 TYR OH HH sing N N 428 TYR OXT HXT sing N N 429 VAL N CA sing N N 430 VAL N H sing N N 431 VAL N H2 sing N N 432 VAL CA C sing N N 433 VAL CA CB sing N N 434 VAL CA HA sing N N 435 VAL C O doub N N 436 VAL C OXT sing N N 437 VAL CB CG1 sing N N 438 VAL CB CG2 sing N N 439 VAL CB HB sing N N 440 VAL CG1 HG11 sing N N 441 VAL CG1 HG12 sing N N 442 VAL CG1 HG13 sing N N 443 VAL CG2 HG21 sing N N 444 VAL CG2 HG22 sing N N 445 VAL CG2 HG23 sing N N 446 VAL OXT HXT sing N N 447 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Swedish Research Council' Sweden 2012-5093 1 'Swedish Research Council' Sweden 2016-03999 2 'European Molecular Biology Organization' ? 'EMBO Young Investigator Programme' 3 'European Research Council' ? 'ERC 260759' 4 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 FUC 3 n 3 NAG 1 n 3 NAG 2 n # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6GF6 _pdbx_initial_refinement_model.details 'Monomer 6GF6' # _atom_sites.entry_id 6GF8 _atom_sites.fract_transf_matrix[1][1] 0.011016 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007953 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009524 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_