data_6GH0 # _entry.id 6GH0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.315 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6GH0 WWPDB D_1200009769 BMRB 34269 # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'NMR structure of two G-quartet G-quadruplex from promoter of c-KIT gene' _pdbx_database_related.db_id 34269 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6GH0 _pdbx_database_status.recvd_initial_deposition_date 2018-05-04 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kotar, A.' 1 ? 'Rigo, R.' 2 ? 'Sissi, C.' 3 ? 'Plavec, J.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 47 _citation.language ? _citation.page_first 2641 _citation.page_last 2653 _citation.title 'Two-quartet kit* G-quadruplex is formed via double-stranded pre-folded structure.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gky1269 _citation.pdbx_database_id_PubMed 30590801 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kotar, A.' 1 ? primary 'Rigo, R.' 2 ? primary 'Sissi, C.' 3 ? primary 'Plavec, J.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;DNA (5'-D(*GP*GP*CP*GP*AP*GP*GP*AP*GP*GP*GP*GP*CP*GP*TP*GP*GP*CP*CP*GP*GP*C)-3') ; _entity.formula_weight 6940.439 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;(DG)(DG)(DC)(DG)(DA)(DG)(DG)(DA)(DG)(DG)(DG)(DG)(DC)(DG)(DT)(DG)(DG)(DC)(DC)(DG) (DG)(DC) ; _entity_poly.pdbx_seq_one_letter_code_can GGCGAGGAGGGGCGTGGCCGGC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DC n 1 4 DG n 1 5 DA n 1 6 DG n 1 7 DG n 1 8 DA n 1 9 DG n 1 10 DG n 1 11 DG n 1 12 DG n 1 13 DC n 1 14 DG n 1 15 DT n 1 16 DG n 1 17 DG n 1 18 DC n 1 19 DC n 1 20 DG n 1 21 DG n 1 22 DC n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 22 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6GH0 _struct_ref.pdbx_db_accession 6GH0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6GH0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 22 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6GH0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 22 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 8 '2D 1H-1H NOESY' 1 isotropic 2 1 8 '2D 1H-1H NOESY' 2 isotropic 3 1 5 '1D 1H-15N HSQC' 2 isotropic 4 1 5 '2D 1H-15N HSQC' 2 isotropic 5 1 5 '2D 1H-13C HSQC' 2 isotropic 6 2 7 '2D 1H-1H TOCSY' 1 isotropic 7 1 6 '2D 1H-13C HSQC aromatic' 1 isotropic 8 1 5 '2D 1H-15N HSQC NH2 only' 2 isotropic 9 2 7 '2D DQF-COSY' 1 isotropic 10 1 6 '2D 1H-1H NOESY' 2 isotropic 11 1 6 '2D 1H-1H NOESY' 1 isotropic 12 2 7 '2D 1H-1H NOESY' 1 isotropic # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 310 atm 1 7.4 100 ? ? mM conditions_1 ? pH ? ? K 2 310 atm 1 7.8 100 ? ? mM conditions_2 ? pD ? ? K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 5 ;0.5 mM 10% 13C, 10% 15N DNA (5'-D(*GP*GP*CP*GP*AP*GP*GP*AP*GP*GP*GP*GP*CP*GP*TP*GP*GP*CP*CP*GP*GP*C)-3'), 100 mM potassium chloride, 20 mM potassium phosphate, 90% H2O/10% D2O ; '90% H2O/10% D2O' 13C_15N_sample solution ;Residue specific labeling. In total 19 samples were prepared differing only in the position of the isotopically enriched residue. ; 6 ;0.4 mM DNA (5'-D(*GP*GP*CP*GP*AP*GP*GP*AP*GP*GP*GP*GP*CP*GP*TP*GP*GP*CP*CP*GP*GP*C)-3'), 100 mM potassium chloride, 20 mM potassium phosphate, 90% H2O/10% D2O ; '90% H2O/10% D2O' sample_1 solution ? 7 ;0.4 mM DNA (5'-D(*GP*GP*CP*GP*AP*GP*GP*AP*GP*GP*GP*GP*CP*GP*TP*GP*GP*CP*CP*GP*GP*C)-3'), 100 mM potassium chloride, 20 mM potassium phosphate, 100% D2O ; '100% D2O' sample_2 solution ? 8 ;0.5 mM DNA (5'-D(*GP*GP*CP*GP*AP*GP*GP*AP*GP*GP*GP*GP*CP*GP*TP*GP*GP*CP*CP*GP*GP*C)-3'), 100 mM potassium chloride, 20 mM potassium phosphate, 90% H2O/10% D2O ; '90% H2O/10% D2O' sample_3 solution ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'Uniform NMR System' ? Varian 800 ? 2 'Uniform NMR System' ? Varian 600 ? # _pdbx_nmr_refine.entry_id 6GH0 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 6 # _pdbx_nmr_ensemble.entry_id 6GH0 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6GH0 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 collection VNMR 3.2A Varian 2 processing VNMR 3.2A Varian 3 'chemical shift assignment' Sparky 3.114 Goddard 4 'peak picking' Sparky 3.114 Goddard 5 'structure calculation' Amber 14 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 6 refinement Amber 14 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6GH0 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6GH0 _struct.title 'Two-quartet kit* G-quadruplex is formed via double-stranded pre-folded structure' _struct.pdbx_descriptor ;DNA (5'-D(*GP*GP*CP*GP*AP*GP*GP*AP*GP*GP*GP*GP*CP*GP*TP*GP*GP*CP*CP*GP*GP*C)-3') ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6GH0 _struct_keywords.text 'G-quadruplex, two G-quartets, c-KIT promoter, DNA' _struct_keywords.pdbx_keywords DNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog1 hydrog ? ? A DG 1 N7 ? ? ? 1_555 A DG 7 N2 ? ? A DG 1 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog2 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DG 7 N1 ? ? A DG 1 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog3 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DG 17 O6 ? ? A DG 1 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog4 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DG 17 N7 ? ? A DG 1 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog5 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DG 6 O6 ? ? A DG 2 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog6 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DG 6 N7 ? ? A DG 2 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog7 hydrog ? ? A DG 2 N7 ? ? ? 1_555 A DG 16 N2 ? ? A DG 2 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog8 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DG 16 N1 ? ? A DG 2 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog9 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DG 12 O6 ? ? A DG 6 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog10 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DG 12 N7 ? ? A DG 6 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog11 hydrog ? ? A DG 7 N7 ? ? ? 1_555 A DG 11 N2 ? ? A DG 7 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog12 hydrog ? ? A DG 7 O6 ? ? ? 1_555 A DG 11 N1 ? ? A DG 7 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog13 hydrog ? ? A DG 9 N7 ? ? ? 1_555 A DG 20 N1 ? ? A DG 9 A DG 20 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? hydrog14 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DC 18 N3 ? ? A DG 10 A DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DC 18 O2 ? ? A DG 10 A DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? A DG 10 O6 ? ? ? 1_555 A DC 18 N4 ? ? A DG 10 A DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? A DG 11 N7 ? ? ? 1_555 A DG 17 N2 ? ? A DG 11 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog18 hydrog ? ? A DG 11 O6 ? ? ? 1_555 A DG 17 N1 ? ? A DG 11 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog19 hydrog ? ? A DG 12 N1 ? ? ? 1_555 A DG 16 O6 ? ? A DG 12 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog20 hydrog ? ? A DG 12 N2 ? ? ? 1_555 A DG 16 N7 ? ? A DG 12 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 6GH0 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DC 3 3 3 DC DC A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DA 5 5 5 DA DA A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DA 8 8 8 DA DA A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DG 11 11 11 DG DG A . n A 1 12 DG 12 12 12 DG DG A . n A 1 13 DC 13 13 13 DC DC A . n A 1 14 DG 14 14 14 DG DG A . n A 1 15 DT 15 15 15 DT DT A . n A 1 16 DG 16 16 16 DG DG A . n A 1 17 DG 17 17 17 DG DG A . n A 1 18 DC 18 18 18 DC DC A . n A 1 19 DC 19 19 19 DC DC A . n A 1 20 DG 20 20 20 DG DG A . n A 1 21 DG 21 21 21 DG DG A . n A 1 22 DC 22 22 22 DC DC A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 4120 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-01-09 2 'Structure model' 1 1 2019-03-20 3 'Structure model' 1 2 2019-05-08 4 'Structure model' 1 3 2019-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' pdbx_database_proc 3 2 'Structure model' pdbx_seq_map_depositor_info 4 3 'Structure model' pdbx_nmr_software 5 3 'Structure model' pdbx_seq_map_depositor_info 6 4 'Structure model' pdbx_database_related # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.year' 5 2 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code_mod' 6 3 'Structure model' '_pdbx_nmr_software.name' 7 3 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code_mod' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 5 ;DNA (5'-D(*GP*GP*CP*GP*AP*GP*GP*AP*GP*GP*GP*GP*CP*GP*TP*GP*GP*CP*CP*GP*GP*C)-3') ; 0.5 ? mM '10% 13C, 10% 15N' 5 'potassium chloride' 100 ? mM 'natural abundance' 5 'potassium phosphate' 20 ? mM 'natural abundance' 6 ;DNA (5'-D(*GP*GP*CP*GP*AP*GP*GP*AP*GP*GP*GP*GP*CP*GP*TP*GP*GP*CP*CP*GP*GP*C)-3') ; 0.4 ? mM 'natural abundance' 6 'potassium chloride' 100 ? mM 'natural abundance' 6 'potassium phosphate' 20 ? mM 'natural abundance' 7 ;DNA (5'-D(*GP*GP*CP*GP*AP*GP*GP*AP*GP*GP*GP*GP*CP*GP*TP*GP*GP*CP*CP*GP*GP*C)-3') ; 0.4 ? mM 'natural abundance' 7 'potassium chloride' 100 ? mM 'natural abundance' 7 'potassium phosphate' 20 ? mM 'natural abundance' 8 ;DNA (5'-D(*GP*GP*CP*GP*AP*GP*GP*AP*GP*GP*GP*GP*CP*GP*TP*GP*GP*CP*CP*GP*GP*C)-3') ; 0.5 ? mM 'natural abundance' 8 'potassium chloride' 100 ? mM 'natural abundance' 8 'potassium phosphate' 20 ? mM 'natural abundance' # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 110.58 108.30 2.28 0.30 N 2 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.67 108.30 4.37 0.30 N 3 1 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 112.06 108.30 3.76 0.30 N 4 1 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 117.16 121.90 -4.74 0.70 N 5 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 112.01 108.30 3.71 0.30 N 6 1 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.98 117.00 -3.02 0.50 N 7 1 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 114.02 118.60 -4.58 0.60 N 8 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.20 108.30 1.90 0.30 N 9 1 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 112.42 108.30 4.12 0.30 N 10 1 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.65 117.00 -3.35 0.50 N 11 1 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.19 117.70 3.49 0.50 N 12 1 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 112.88 118.60 -5.72 0.60 N 13 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 114.38 108.30 6.08 0.30 N 14 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.94 108.30 4.64 0.30 N 15 1 C5 A DG 11 ? ? C6 A DG 11 ? ? N1 A DG 11 ? ? 114.58 111.50 3.08 0.50 N 16 1 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 112.78 108.30 4.48 0.30 N 17 1 "O4'" A DC 13 ? ? "C1'" A DC 13 ? ? N1 A DC 13 ? ? 111.36 108.30 3.06 0.30 N 18 1 N3 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 116.99 121.90 -4.91 0.70 N 19 1 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.94 108.30 2.64 0.30 N 20 1 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 111.88 108.30 3.58 0.30 N 21 1 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 110.32 108.30 2.02 0.30 N 22 1 N3 A DG 16 ? ? C4 A DG 16 ? ? C5 A DG 16 ? ? 124.61 128.60 -3.99 0.50 N 23 1 N3 A DG 16 ? ? C4 A DG 16 ? ? N9 A DG 16 ? ? 129.73 126.00 3.73 0.60 N 24 1 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 112.62 108.30 4.32 0.30 N 25 1 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 111.63 108.30 3.33 0.30 N 26 1 N1 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 122.71 118.90 3.81 0.60 N 27 1 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 116.02 121.90 -5.88 0.70 N 28 1 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 111.16 108.30 2.86 0.30 N 29 1 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.98 121.90 -4.92 0.70 N 30 1 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 114.02 108.30 5.72 0.30 N 31 1 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 111.98 108.30 3.68 0.30 N 32 1 N3 A DC 22 ? ? C2 A DC 22 ? ? O2 A DC 22 ? ? 116.22 121.90 -5.68 0.70 N 33 2 N3 A DG 1 ? ? C4 A DG 1 ? ? C5 A DG 1 ? ? 125.58 128.60 -3.02 0.50 N 34 2 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.56 108.30 5.26 0.30 N 35 2 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 111.02 108.30 2.72 0.30 N 36 2 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 117.41 121.90 -4.49 0.70 N 37 2 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 112.71 108.30 4.41 0.30 N 38 2 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 110.76 108.30 2.46 0.30 N 39 2 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.12 117.00 -3.88 0.50 N 40 2 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.18 117.70 3.48 0.50 N 41 2 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 112.30 118.60 -6.30 0.60 N 42 2 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.16 108.30 2.86 0.30 N 43 2 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 112.49 108.30 4.19 0.30 N 44 2 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.28 117.70 3.58 0.50 N 45 2 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.69 118.60 -4.91 0.60 N 46 2 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 113.24 108.30 4.94 0.30 N 47 2 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 111.72 108.30 3.42 0.30 N 48 2 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 110.21 108.30 1.91 0.30 N 49 2 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 113.27 108.30 4.97 0.30 N 50 2 "O4'" A DC 13 ? ? "C1'" A DC 13 ? ? N1 A DC 13 ? ? 111.46 108.30 3.16 0.30 N 51 2 N3 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 116.88 121.90 -5.02 0.70 N 52 2 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? "C2'" A DT 15 ? ? 100.64 105.90 -5.26 0.80 N 53 2 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 113.74 108.30 5.44 0.30 N 54 2 N3 A DT 15 ? ? C2 A DT 15 ? ? O2 A DT 15 ? ? 118.45 122.30 -3.85 0.60 N 55 2 C6 A DT 15 ? ? C5 A DT 15 ? ? C7 A DT 15 ? ? 119.07 122.90 -3.83 0.60 N 56 2 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.08 108.30 2.78 0.30 N 57 2 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 112.62 108.30 4.32 0.30 N 58 2 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 113.43 108.30 5.13 0.30 N 59 2 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.21 121.90 -4.69 0.70 N 60 2 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 117.31 121.90 -4.59 0.70 N 61 2 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 111.01 108.30 2.71 0.30 N 62 2 "O4'" A DC 22 ? ? "C1'" A DC 22 ? ? N1 A DC 22 ? ? 111.16 108.30 2.86 0.30 N 63 3 N3 A DG 1 ? ? C4 A DG 1 ? ? C5 A DG 1 ? ? 124.65 128.60 -3.95 0.50 N 64 3 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.33 108.30 4.03 0.30 N 65 3 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 112.11 108.30 3.81 0.30 N 66 3 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 122.90 118.90 4.00 0.60 N 67 3 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 116.33 121.90 -5.57 0.70 N 68 3 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.92 108.30 2.62 0.30 N 69 3 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 111.31 108.30 3.01 0.30 N 70 3 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.40 117.00 -3.60 0.50 N 71 3 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.35 117.70 3.65 0.50 N 72 3 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 114.08 118.60 -4.52 0.60 N 73 3 N3 A DG 6 ? ? C4 A DG 6 ? ? C5 A DG 6 ? ? 125.55 128.60 -3.05 0.50 N 74 3 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 112.01 108.30 3.71 0.30 N 75 3 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.69 117.00 -3.31 0.50 N 76 3 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.53 117.70 3.83 0.50 N 77 3 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 112.22 118.60 -6.38 0.60 N 78 3 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.81 108.30 3.51 0.30 N 79 3 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 111.56 108.30 3.26 0.30 N 80 3 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 110.30 108.30 2.00 0.30 N 81 3 N3 A DG 11 ? ? C4 A DG 11 ? ? C5 A DG 11 ? ? 125.53 128.60 -3.07 0.50 N 82 3 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 113.83 108.30 5.53 0.30 N 83 3 "O4'" A DC 13 ? ? "C1'" A DC 13 ? ? N1 A DC 13 ? ? 110.13 108.30 1.83 0.30 N 84 3 N3 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 117.24 121.90 -4.66 0.70 N 85 3 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.77 108.30 2.47 0.30 N 86 3 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 113.53 108.30 5.23 0.30 N 87 3 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 110.97 108.30 2.67 0.30 N 88 3 N3 A DG 16 ? ? C4 A DG 16 ? ? C5 A DG 16 ? ? 125.10 128.60 -3.50 0.50 N 89 3 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 113.78 108.30 5.48 0.30 N 90 3 "O4'" A DC 18 ? ? "C4'" A DC 18 ? ? "C3'" A DC 18 ? ? 101.82 104.50 -2.68 0.40 N 91 3 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 112.51 108.30 4.21 0.30 N 92 3 N1 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 122.70 118.90 3.80 0.60 N 93 3 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 116.41 121.90 -5.49 0.70 N 94 3 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.53 121.90 -5.37 0.70 N 95 3 "C3'" A DC 19 ? ? "O3'" A DC 19 ? ? P A DG 20 ? ? 127.38 119.70 7.68 1.20 Y 96 3 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 110.15 108.30 1.85 0.30 N 97 3 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 110.95 108.30 2.65 0.30 N 98 3 "O4'" A DC 22 ? ? "C1'" A DC 22 ? ? N1 A DC 22 ? ? 111.72 108.30 3.42 0.30 N 99 4 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 110.45 108.30 2.15 0.30 N 100 4 N3 A DG 1 ? ? C4 A DG 1 ? ? C5 A DG 1 ? ? 125.18 128.60 -3.42 0.50 N 101 4 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.67 108.30 5.37 0.30 N 102 4 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.95 108.30 2.65 0.30 N 103 4 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 117.20 121.90 -4.70 0.70 N 104 4 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.12 108.30 2.82 0.30 N 105 4 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 110.84 108.30 2.54 0.30 N 106 4 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.73 117.00 -3.27 0.50 N 107 4 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.38 117.70 3.68 0.50 N 108 4 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.08 118.60 -5.52 0.60 N 109 4 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.15 108.30 2.85 0.30 N 110 4 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 110.37 108.30 2.07 0.30 N 111 4 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.54 117.00 -3.46 0.50 N 112 4 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.59 117.70 3.89 0.50 N 113 4 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.16 118.60 -5.44 0.60 N 114 4 "C1'" A DG 9 ? ? "O4'" A DG 9 ? ? "C4'" A DG 9 ? ? 103.43 110.10 -6.67 1.00 N 115 4 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 114.53 108.30 6.23 0.30 N 116 4 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 110.39 108.30 2.09 0.30 N 117 4 N3 A DG 11 ? ? C4 A DG 11 ? ? C5 A DG 11 ? ? 125.22 128.60 -3.38 0.50 N 118 4 N3 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 116.73 121.90 -5.17 0.70 N 119 4 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 113.26 108.30 4.96 0.30 N 120 4 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 112.58 108.30 4.28 0.30 N 121 4 C6 A DT 15 ? ? C5 A DT 15 ? ? C7 A DT 15 ? ? 119.09 122.90 -3.81 0.60 N 122 4 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.22 108.30 2.92 0.30 N 123 4 N3 A DG 16 ? ? C4 A DG 16 ? ? C5 A DG 16 ? ? 125.53 128.60 -3.07 0.50 N 124 4 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 113.30 108.30 5.00 0.30 N 125 4 C5 A DG 17 ? ? C6 A DG 17 ? ? N1 A DG 17 ? ? 114.57 111.50 3.07 0.50 N 126 4 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 113.58 108.30 5.28 0.30 N 127 4 N1 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 122.52 118.90 3.62 0.60 N 128 4 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 116.34 121.90 -5.56 0.70 N 129 4 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 111.14 108.30 2.84 0.30 N 130 4 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 117.60 121.90 -4.30 0.70 N 131 4 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 111.34 108.30 3.04 0.30 N 132 4 "O4'" A DC 22 ? ? "C1'" A DC 22 ? ? N1 A DC 22 ? ? 110.42 108.30 2.12 0.30 N 133 4 N3 A DC 22 ? ? C2 A DC 22 ? ? O2 A DC 22 ? ? 117.45 121.90 -4.45 0.70 N 134 5 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 110.47 108.30 2.17 0.30 N 135 5 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.38 108.30 4.08 0.30 N 136 5 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 114.77 108.30 6.47 0.30 N 137 5 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 117.44 121.90 -4.46 0.70 N 138 5 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.63 108.30 2.33 0.30 N 139 5 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.27 117.00 -3.73 0.50 N 140 5 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.83 117.70 4.13 0.50 N 141 5 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.79 118.60 -4.81 0.60 N 142 5 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.25 108.30 1.95 0.30 N 143 5 N3 A DG 6 ? ? C4 A DG 6 ? ? C5 A DG 6 ? ? 125.55 128.60 -3.05 0.50 N 144 5 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.61 108.30 3.31 0.30 N 145 5 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.61 117.00 -3.39 0.50 N 146 5 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.58 117.70 3.88 0.50 N 147 5 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 112.97 118.60 -5.63 0.60 N 148 5 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.75 108.30 3.45 0.30 N 149 5 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.28 108.30 3.98 0.30 N 150 5 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 110.25 108.30 1.95 0.30 N 151 5 N3 A DG 11 ? ? C4 A DG 11 ? ? C5 A DG 11 ? ? 125.51 128.60 -3.09 0.50 N 152 5 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 111.47 108.30 3.17 0.30 N 153 5 "O4'" A DC 13 ? ? "C1'" A DC 13 ? ? N1 A DC 13 ? ? 111.39 108.30 3.09 0.30 N 154 5 N3 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 116.55 121.90 -5.35 0.70 N 155 5 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 114.33 108.30 6.03 0.30 N 156 5 C6 A DT 15 ? ? C5 A DT 15 ? ? C7 A DT 15 ? ? 119.25 122.90 -3.65 0.60 N 157 5 N3 A DG 16 ? ? C4 A DG 16 ? ? C5 A DG 16 ? ? 124.95 128.60 -3.65 0.50 N 158 5 N3 A DG 16 ? ? C4 A DG 16 ? ? N9 A DG 16 ? ? 129.61 126.00 3.61 0.60 N 159 5 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 113.35 108.30 5.05 0.30 N 160 5 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 115.84 108.30 7.54 0.30 N 161 5 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 116.63 121.90 -5.27 0.70 N 162 5 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 111.72 108.30 3.42 0.30 N 163 5 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.68 121.90 -5.22 0.70 N 164 5 "C3'" A DC 19 ? ? "O3'" A DC 19 ? ? P A DG 20 ? ? 127.37 119.70 7.67 1.20 Y 165 5 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 110.68 108.30 2.38 0.30 N 166 5 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 111.31 108.30 3.01 0.30 N 167 5 "O4'" A DC 22 ? ? "C1'" A DC 22 ? ? N1 A DC 22 ? ? 110.43 108.30 2.13 0.30 N 168 5 N3 A DC 22 ? ? C2 A DC 22 ? ? O2 A DC 22 ? ? 117.53 121.90 -4.37 0.70 N 169 6 "C3'" A DG 1 ? ? "C2'" A DG 1 ? ? "C1'" A DG 1 ? ? 97.59 102.40 -4.81 0.80 N 170 6 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 115.47 108.30 7.17 0.30 N 171 6 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.10 108.30 3.80 0.30 N 172 6 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 112.75 108.30 4.45 0.30 N 173 6 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 116.96 121.90 -4.94 0.70 N 174 6 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 113.37 108.30 5.07 0.30 N 175 6 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.20 117.00 -3.80 0.50 N 176 6 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.54 117.70 3.84 0.50 N 177 6 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.13 118.60 -5.47 0.60 N 178 6 C5 A DG 6 ? ? C6 A DG 6 ? ? N1 A DG 6 ? ? 114.50 111.50 3.00 0.50 N 179 6 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.33 108.30 3.03 0.30 N 180 6 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 111.77 108.30 3.47 0.30 N 181 6 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.25 117.00 -3.75 0.50 N 182 6 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.35 117.70 3.65 0.50 N 183 6 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 112.40 118.60 -6.20 0.60 N 184 6 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 113.81 108.30 5.51 0.30 N 185 6 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.24 108.30 3.94 0.30 N 186 6 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 113.02 108.30 4.72 0.30 N 187 6 N3 A DG 11 ? ? C4 A DG 11 ? ? C5 A DG 11 ? ? 125.08 128.60 -3.52 0.50 N 188 6 "O4'" A DC 13 ? ? "C1'" A DC 13 ? ? N1 A DC 13 ? ? 111.92 108.30 3.62 0.30 N 189 6 N3 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 117.11 121.90 -4.79 0.70 N 190 6 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 111.41 108.30 3.11 0.30 N 191 6 C6 A DT 15 ? ? C5 A DT 15 ? ? C7 A DT 15 ? ? 119.21 122.90 -3.69 0.60 N 192 6 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 113.35 108.30 5.05 0.30 N 193 6 C5 A DG 16 ? ? C6 A DG 16 ? ? N1 A DG 16 ? ? 114.57 111.50 3.07 0.50 N 194 6 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 111.45 108.30 3.15 0.30 N 195 6 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 114.35 108.30 6.05 0.30 N 196 6 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 116.96 121.90 -4.94 0.70 N 197 6 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 111.40 108.30 3.10 0.30 N 198 6 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.64 121.90 -5.26 0.70 N 199 6 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 112.40 108.30 4.10 0.30 N 200 6 "O4'" A DC 22 ? ? "C1'" A DC 22 ? ? N1 A DC 22 ? ? 110.29 108.30 1.99 0.30 N 201 6 N3 A DC 22 ? ? C2 A DC 22 ? ? O2 A DC 22 ? ? 116.98 121.90 -4.92 0.70 N 202 7 N3 A DG 1 ? ? C4 A DG 1 ? ? C5 A DG 1 ? ? 125.51 128.60 -3.09 0.50 N 203 7 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.61 108.30 3.31 0.30 N 204 7 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 112.85 108.30 4.55 0.30 N 205 7 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 117.17 121.90 -4.73 0.70 N 206 7 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 112.14 108.30 3.84 0.30 N 207 7 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.30 117.00 -3.70 0.50 N 208 7 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.51 117.70 3.81 0.50 N 209 7 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.10 118.60 -5.50 0.60 N 210 7 N3 A DG 6 ? ? C4 A DG 6 ? ? C5 A DG 6 ? ? 125.49 128.60 -3.11 0.50 N 211 7 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.79 108.30 3.49 0.30 N 212 7 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 111.57 108.30 3.27 0.30 N 213 7 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.44 117.00 -3.56 0.50 N 214 7 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.44 117.70 3.74 0.50 N 215 7 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 112.31 118.60 -6.29 0.60 N 216 7 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.21 108.30 3.91 0.30 N 217 7 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.07 108.30 3.77 0.30 N 218 7 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 110.56 108.30 2.26 0.30 N 219 7 N3 A DG 11 ? ? C4 A DG 11 ? ? C5 A DG 11 ? ? 125.37 128.60 -3.23 0.50 N 220 7 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 111.29 108.30 2.99 0.30 N 221 7 "O4'" A DC 13 ? ? "C1'" A DC 13 ? ? N1 A DC 13 ? ? 111.28 108.30 2.98 0.30 N 222 7 N3 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 117.70 121.90 -4.20 0.70 N 223 7 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 111.42 108.30 3.12 0.30 N 224 7 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 110.11 108.30 1.81 0.30 N 225 7 C6 A DT 15 ? ? C5 A DT 15 ? ? C7 A DT 15 ? ? 119.26 122.90 -3.64 0.60 N 226 7 C5 A DG 16 ? ? C6 A DG 16 ? ? N1 A DG 16 ? ? 114.56 111.50 3.06 0.50 N 227 7 "C3'" A DG 16 ? ? "O3'" A DG 16 ? ? P A DG 17 ? ? 127.16 119.70 7.46 1.20 Y 228 7 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 113.85 108.30 5.55 0.30 N 229 7 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 112.54 108.30 4.24 0.30 N 230 7 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 117.11 121.90 -4.79 0.70 N 231 7 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.96 108.30 2.66 0.30 N 232 7 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 117.01 121.90 -4.89 0.70 N 233 7 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 110.22 108.30 1.92 0.30 N 234 7 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 111.78 108.30 3.48 0.30 N 235 7 "O4'" A DC 22 ? ? "C1'" A DC 22 ? ? N1 A DC 22 ? ? 110.39 108.30 2.09 0.30 N 236 7 N3 A DC 22 ? ? C2 A DC 22 ? ? O2 A DC 22 ? ? 117.47 121.90 -4.43 0.70 N 237 8 N3 A DG 1 ? ? C4 A DG 1 ? ? C5 A DG 1 ? ? 125.06 128.60 -3.54 0.50 N 238 8 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.27 108.30 3.97 0.30 N 239 8 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 111.08 108.30 2.78 0.30 N 240 8 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 116.75 121.90 -5.15 0.70 N 241 8 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.36 108.30 2.06 0.30 N 242 8 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 111.67 108.30 3.37 0.30 N 243 8 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.51 117.00 -3.49 0.50 N 244 8 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.26 117.70 3.56 0.50 N 245 8 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.45 118.60 -5.15 0.60 N 246 8 N3 A DG 6 ? ? C4 A DG 6 ? ? C5 A DG 6 ? ? 124.96 128.60 -3.64 0.50 N 247 8 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.52 108.30 2.22 0.30 N 248 8 C5 A DG 7 ? ? C6 A DG 7 ? ? N1 A DG 7 ? ? 115.12 111.50 3.62 0.50 N 249 8 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 112.11 108.30 3.81 0.30 N 250 8 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.60 117.00 -3.40 0.50 N 251 8 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.39 117.70 3.69 0.50 N 252 8 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.31 118.60 -5.29 0.60 N 253 8 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 113.68 108.30 5.38 0.30 N 254 8 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 111.04 108.30 2.74 0.30 N 255 8 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 110.57 108.30 2.27 0.30 N 256 8 "O4'" A DC 13 ? ? "C1'" A DC 13 ? ? N1 A DC 13 ? ? 111.30 108.30 3.00 0.30 N 257 8 N3 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 117.16 121.90 -4.74 0.70 N 258 8 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 113.28 108.30 4.98 0.30 N 259 8 N3 A DT 15 ? ? C2 A DT 15 ? ? O2 A DT 15 ? ? 118.63 122.30 -3.67 0.60 N 260 8 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.60 108.30 3.30 0.30 N 261 8 N3 A DG 16 ? ? C4 A DG 16 ? ? C5 A DG 16 ? ? 125.11 128.60 -3.49 0.50 N 262 8 N3 A DG 16 ? ? C4 A DG 16 ? ? N9 A DG 16 ? ? 129.73 126.00 3.73 0.60 N 263 8 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 112.47 108.30 4.17 0.30 N 264 8 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 112.45 108.30 4.15 0.30 N 265 8 N1 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 122.73 118.90 3.83 0.60 N 266 8 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 116.86 121.90 -5.04 0.70 N 267 8 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 111.77 108.30 3.47 0.30 N 268 8 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.83 121.90 -5.07 0.70 N 269 8 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 111.54 108.30 3.24 0.30 N 270 8 "O4'" A DC 22 ? ? "C1'" A DC 22 ? ? N1 A DC 22 ? ? 113.31 108.30 5.01 0.30 N 271 9 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.54 108.30 5.24 0.30 N 272 9 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.47 108.30 2.17 0.30 N 273 9 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 116.71 121.90 -5.19 0.70 N 274 9 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.69 108.30 2.39 0.30 N 275 9 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.43 117.00 -3.57 0.50 N 276 9 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.27 117.70 3.57 0.50 N 277 9 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 113.41 118.60 -5.19 0.60 N 278 9 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.04 108.30 2.74 0.30 N 279 9 N3 A DG 6 ? ? C4 A DG 6 ? ? C5 A DG 6 ? ? 125.39 128.60 -3.21 0.50 N 280 9 "C3'" A DG 7 ? ? "C2'" A DG 7 ? ? "C1'" A DG 7 ? ? 97.50 102.40 -4.90 0.80 N 281 9 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 112.29 108.30 3.99 0.30 N 282 9 "O4'" A DA 8 ? ? "C1'" A DA 8 ? ? N9 A DA 8 ? ? 111.13 108.30 2.83 0.30 N 283 9 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.73 117.00 -3.27 0.50 N 284 9 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.02 117.70 3.32 0.50 N 285 9 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.99 118.60 -4.61 0.60 N 286 9 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.58 108.30 2.28 0.30 N 287 9 C5 A DG 11 ? ? C6 A DG 11 ? ? N1 A DG 11 ? ? 114.56 111.50 3.06 0.50 N 288 9 "O4'" A DC 13 ? ? "C1'" A DC 13 ? ? N1 A DC 13 ? ? 111.87 108.30 3.57 0.30 N 289 9 N3 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 116.81 121.90 -5.09 0.70 N 290 9 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.22 108.30 1.92 0.30 N 291 9 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 112.40 108.30 4.10 0.30 N 292 9 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 110.68 108.30 2.38 0.30 N 293 9 N3 A DG 16 ? ? C4 A DG 16 ? ? C5 A DG 16 ? ? 124.58 128.60 -4.02 0.50 N 294 9 N3 A DG 16 ? ? C4 A DG 16 ? ? N9 A DG 16 ? ? 129.92 126.00 3.92 0.60 N 295 9 "C3'" A DG 16 ? ? "O3'" A DG 16 ? ? P A DG 17 ? ? 126.91 119.70 7.21 1.20 Y 296 9 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 113.93 108.30 5.63 0.30 N 297 9 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 112.09 108.30 3.79 0.30 N 298 9 N1 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 122.78 118.90 3.88 0.60 N 299 9 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 116.13 121.90 -5.77 0.70 N 300 9 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.61 108.30 2.31 0.30 N 301 9 N1 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 122.61 118.90 3.71 0.60 N 302 9 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.50 121.90 -5.40 0.70 N 303 9 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 111.70 108.30 3.40 0.30 N 304 9 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 111.41 108.30 3.11 0.30 N 305 9 "O4'" A DC 22 ? ? "C1'" A DC 22 ? ? N1 A DC 22 ? ? 112.70 108.30 4.40 0.30 N 306 10 N3 A DG 1 ? ? C4 A DG 1 ? ? C5 A DG 1 ? ? 125.27 128.60 -3.33 0.50 N 307 10 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.55 108.30 3.25 0.30 N 308 10 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.68 108.30 2.38 0.30 N 309 10 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 117.19 121.90 -4.71 0.70 N 310 10 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 112.33 108.30 4.03 0.30 N 311 10 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 110.77 108.30 2.47 0.30 N 312 10 C4 A DA 5 ? ? C5 A DA 5 ? ? C6 A DA 5 ? ? 113.66 117.00 -3.34 0.50 N 313 10 C5 A DA 5 ? ? C6 A DA 5 ? ? N1 A DA 5 ? ? 121.25 117.70 3.55 0.50 N 314 10 N1 A DA 5 ? ? C6 A DA 5 ? ? N6 A DA 5 ? ? 112.32 118.60 -6.28 0.60 N 315 10 N3 A DG 6 ? ? C4 A DG 6 ? ? C5 A DG 6 ? ? 125.40 128.60 -3.20 0.50 N 316 10 C5 A DG 7 ? ? C6 A DG 7 ? ? N1 A DG 7 ? ? 114.82 111.50 3.32 0.50 N 317 10 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.73 117.00 -3.27 0.50 N 318 10 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.54 117.70 3.84 0.50 N 319 10 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.27 118.60 -5.33 0.60 N 320 10 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.29 108.30 3.99 0.30 N 321 10 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 113.70 108.30 5.40 0.30 N 322 10 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 116.10 108.30 7.80 0.30 N 323 10 "O4'" A DC 13 ? ? "C1'" A DC 13 ? ? N1 A DC 13 ? ? 110.53 108.30 2.23 0.30 N 324 10 N3 A DC 13 ? ? C2 A DC 13 ? ? O2 A DC 13 ? ? 117.05 121.90 -4.85 0.70 N 325 10 "O4'" A DT 15 ? ? "C1'" A DT 15 ? ? N1 A DT 15 ? ? 112.01 108.30 3.71 0.30 N 326 10 C6 A DT 15 ? ? C5 A DT 15 ? ? C7 A DT 15 ? ? 119.12 122.90 -3.78 0.60 N 327 10 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 113.33 108.30 5.03 0.30 N 328 10 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 113.08 108.30 4.78 0.30 N 329 10 "O4'" A DC 18 ? ? "C1'" A DC 18 ? ? N1 A DC 18 ? ? 115.23 108.30 6.93 0.30 N 330 10 N3 A DC 18 ? ? C2 A DC 18 ? ? O2 A DC 18 ? ? 116.35 121.90 -5.55 0.70 N 331 10 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.84 121.90 -5.06 0.70 N 332 10 "C3'" A DC 19 ? ? "O3'" A DC 19 ? ? P A DG 20 ? ? 127.35 119.70 7.65 1.20 Y 333 10 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 110.36 108.30 2.06 0.30 N 334 10 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 111.59 108.30 3.29 0.30 N 335 10 "O4'" A DC 22 ? ? "C1'" A DC 22 ? ? N1 A DC 22 ? ? 112.36 108.30 4.06 0.30 N 336 10 N3 A DC 22 ? ? C2 A DC 22 ? ? O2 A DC 22 ? ? 116.57 121.90 -5.33 0.70 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG A 1 ? ? 0.068 'SIDE CHAIN' 2 1 DG A 6 ? ? 0.085 'SIDE CHAIN' 3 1 DG A 7 ? ? 0.091 'SIDE CHAIN' 4 1 DG A 11 ? ? 0.100 'SIDE CHAIN' 5 1 DG A 16 ? ? 0.092 'SIDE CHAIN' 6 2 DG A 1 ? ? 0.082 'SIDE CHAIN' 7 2 DA A 5 ? ? 0.053 'SIDE CHAIN' 8 2 DG A 6 ? ? 0.133 'SIDE CHAIN' 9 2 DG A 7 ? ? 0.129 'SIDE CHAIN' 10 2 DG A 11 ? ? 0.112 'SIDE CHAIN' 11 2 DT A 15 ? ? 0.089 'SIDE CHAIN' 12 2 DG A 20 ? ? 0.066 'SIDE CHAIN' 13 3 DG A 1 ? ? 0.095 'SIDE CHAIN' 14 3 DG A 6 ? ? 0.118 'SIDE CHAIN' 15 3 DG A 7 ? ? 0.082 'SIDE CHAIN' 16 3 DG A 10 ? ? 0.063 'SIDE CHAIN' 17 3 DG A 11 ? ? 0.114 'SIDE CHAIN' 18 3 DG A 16 ? ? 0.089 'SIDE CHAIN' 19 3 DG A 20 ? ? 0.065 'SIDE CHAIN' 20 3 DC A 22 ? ? 0.070 'SIDE CHAIN' 21 4 DG A 6 ? ? 0.107 'SIDE CHAIN' 22 4 DG A 7 ? ? 0.064 'SIDE CHAIN' 23 4 DG A 9 ? ? 0.060 'SIDE CHAIN' 24 4 DG A 10 ? ? 0.068 'SIDE CHAIN' 25 4 DG A 11 ? ? 0.105 'SIDE CHAIN' 26 4 DG A 16 ? ? 0.075 'SIDE CHAIN' 27 5 DG A 1 ? ? 0.073 'SIDE CHAIN' 28 5 DA A 5 ? ? 0.063 'SIDE CHAIN' 29 5 DG A 7 ? ? 0.071 'SIDE CHAIN' 30 5 DG A 11 ? ? 0.118 'SIDE CHAIN' 31 5 DG A 12 ? ? 0.069 'SIDE CHAIN' 32 5 DG A 17 ? ? 0.053 'SIDE CHAIN' 33 5 DC A 18 ? ? 0.063 'SIDE CHAIN' 34 6 DG A 1 ? ? 0.074 'SIDE CHAIN' 35 6 DG A 4 ? ? 0.095 'SIDE CHAIN' 36 6 DG A 9 ? ? 0.051 'SIDE CHAIN' 37 6 DG A 10 ? ? 0.090 'SIDE CHAIN' 38 7 DG A 1 ? ? 0.065 'SIDE CHAIN' 39 7 DG A 6 ? ? 0.096 'SIDE CHAIN' 40 7 DG A 10 ? ? 0.123 'SIDE CHAIN' 41 7 DG A 11 ? ? 0.062 'SIDE CHAIN' 42 7 DG A 16 ? ? 0.069 'SIDE CHAIN' 43 8 DG A 1 ? ? 0.094 'SIDE CHAIN' 44 8 DG A 7 ? ? 0.087 'SIDE CHAIN' 45 8 DG A 10 ? ? 0.074 'SIDE CHAIN' 46 8 DG A 11 ? ? 0.169 'SIDE CHAIN' 47 8 DG A 12 ? ? 0.081 'SIDE CHAIN' 48 9 DG A 1 ? ? 0.070 'SIDE CHAIN' 49 9 DA A 8 ? ? 0.071 'SIDE CHAIN' 50 9 DG A 10 ? ? 0.055 'SIDE CHAIN' 51 9 DG A 11 ? ? 0.092 'SIDE CHAIN' 52 9 DG A 20 ? ? 0.059 'SIDE CHAIN' 53 10 DG A 1 ? ? 0.134 'SIDE CHAIN' 54 10 DG A 7 ? ? 0.085 'SIDE CHAIN' 55 10 DG A 11 ? ? 0.072 'SIDE CHAIN' 56 10 DG A 14 ? ? 0.057 'SIDE CHAIN' 57 10 DT A 15 ? ? 0.065 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6GH0 'double helix' 6GH0 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 2 1_555 A DG 6 1_555 0.801 4.177 -0.553 7.729 3.187 -90.379 1 A_DG2:DG6_A A 2 ? A 6 ? 6 3 1 A DG 11 1_555 A DG 7 1_555 0.751 4.232 0.451 -5.810 -4.051 -91.938 2 A_DG11:DG7_A A 11 ? A 7 ? 6 3 1 A DG 17 1_555 A DG 1 1_555 -0.735 -4.195 -0.680 9.882 4.045 91.943 3 A_DG17:DG1_A A 17 ? A 1 ? 6 3 1 A DG 12 1_555 A DG 16 1_555 0.811 4.184 -0.624 8.060 4.286 -90.811 4 A_DG12:DG16_A A 12 ? A 16 ? 6 3 1 A DG 9 1_555 A DG 20 1_555 -5.097 -0.293 0.004 -8.138 62.117 -166.699 5 A_DG9:DG20_A A 9 ? A 20 ? ? 4 1 A DG 10 1_555 A DC 18 1_555 -0.017 0.012 -0.367 -29.149 -17.487 -1.710 6 A_DG10:DC18_A A 10 ? A 18 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 2 1_555 A DG 6 1_555 A DG 11 1_555 A DG 7 1_555 -1.213 -3.174 -0.114 173.584 -38.032 37.757 -1.635 0.387 -0.516 -19.182 -87.551 177.825 1 AA_DG2DG11:DG7DG6_AA A 2 ? A 6 ? A 11 ? A 7 ? 1 A DG 11 1_555 A DG 7 1_555 A DG 17 1_555 A DG 1 1_555 0.966 4.208 0.018 12.546 -0.218 -179.251 -2.104 0.483 0.018 0.109 6.273 -179.255 2 AA_DG11DG17:DG1DG7_AA A 11 ? A 7 ? A 17 ? A 1 ? 1 A DG 17 1_555 A DG 1 1_555 A DG 12 1_555 A DG 16 1_555 0.877 3.315 0.095 -172.496 36.083 -12.911 -1.684 0.314 0.189 -18.384 -87.886 -176.253 3 AA_DG17DG12:DG16DG1_AA A 17 ? A 1 ? A 12 ? A 16 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Slovenian Research Agency' Slovenia P1-0242 1 'Slovenian Research Agency' Slovenia J1-6733 2 ? Italy CPDA147272/14 3 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #