HEADER ANTIMICROBIAL PROTEIN 12-MAY-18 6GIL TITLE NMR STRUCTURE OF TEMPORIN B IN SDS MICELLES COMPND MOL_ID: 1; COMPND 2 MOLECULE: TEMPORIN-B; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: TEMPORIN B IS AN ANTIMICROBIAL PEPTIDE DERIVED FROM COMPND 6 RANA TEMPORARIA SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: RANA TEMPORARIA; SOURCE 4 ORGANISM_COMMON: EUROPEAN COMMON FROG; SOURCE 5 ORGANISM_TAXID: 8407 KEYWDS AMP, TEMPORIN B, ANTIMICROBIAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.MANZO,J.A.MASON REVDAT 5 14-JUN-23 6GIL 1 REMARK REVDAT 4 08-MAY-19 6GIL 1 REMARK REVDAT 3 13-FEB-19 6GIL 1 JRNL REVDAT 2 12-SEP-18 6GIL 1 REMARK REVDAT 1 13-JUN-18 6GIL 0 JRNL AUTH G.MANZO,P.M.FERGUSON,V.B.GUSTILO,C.K.HIND,M.CLIFFORD, JRNL AUTH 2 T.T.BUI,A.F.DRAKE,R.A.ATKINSON,J.M.SUTTON,G.BATONI, JRNL AUTH 3 C.D.LORENZ,D.A.PHOENIX,A.J.MASON JRNL TITL MINOR SEQUENCE MODIFICATIONS IN TEMPORIN B CAUSE DRASTIC JRNL TITL 2 CHANGES IN ANTIBACTERIAL POTENCY AND SELECTIVITY BY JRNL TITL 3 FUNDAMENTALLY ALTERING MEMBRANE ACTIVITY. JRNL REF SCI REP V. 9 1385 2019 JRNL REFN ESSN 2045-2322 JRNL PMID 30718667 JRNL DOI 10.1038/S41598-018-37630-3 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYNAMO, DYNAMO REMARK 3 AUTHORS : DELAGLIO AND KUSZEWSKI (DYNAMO), DELAGLIO AND REMARK 3 KUSZEWSKI (DYNAMO) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GIL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1200010002. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.00 REMARK 210 IONIC STRENGTH : NO SALTS REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 100 MM U-98% 2H DEUTERATED REMARK 210 SODIUM DODECYL SULPHATE, 2 MM TEMPORIN B, 0.05 % W/W 2H 3- REMARK 210 (TRIMETHYLSILYL)PROPIONIC-2,2,3,3-D4 ACID, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H TOCSY; 2D 1H-1H NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CARA 1.9.1.2, TOPSPIN, NMRPIPE REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 1440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 2 -51.65 -179.57 REMARK 500 1 VAL A 5 98.18 57.07 REMARK 500 1 ASN A 7 -20.11 -148.69 REMARK 500 1 LEU A 8 49.60 -172.44 REMARK 500 1 LEU A 12 -1.72 68.71 REMARK 500 2 PRO A 3 -36.74 -37.69 REMARK 500 2 ILE A 4 34.83 -77.29 REMARK 500 2 VAL A 5 99.44 33.37 REMARK 500 2 ASN A 7 37.78 -158.87 REMARK 500 2 LEU A 8 56.43 82.36 REMARK 500 2 LYS A 10 -7.18 66.34 REMARK 500 2 SER A 11 -70.59 -64.43 REMARK 500 3 ILE A 4 -71.25 -83.81 REMARK 500 3 ASN A 7 -31.11 -148.95 REMARK 500 3 LEU A 8 47.11 -168.96 REMARK 500 3 LYS A 10 -124.53 53.58 REMARK 500 3 LEU A 12 -77.91 59.41 REMARK 500 4 ILE A 4 -73.73 -61.10 REMARK 500 4 VAL A 5 -126.57 -74.74 REMARK 500 4 ASN A 7 36.02 -172.94 REMARK 500 4 LEU A 8 64.45 84.07 REMARK 500 4 LYS A 10 171.16 54.94 REMARK 500 4 SER A 11 -10.44 -165.31 REMARK 500 5 PRO A 3 -35.05 -37.98 REMARK 500 5 ILE A 4 -100.93 -95.37 REMARK 500 5 ASN A 7 36.68 -147.38 REMARK 500 5 LEU A 8 63.25 93.74 REMARK 500 5 LYS A 10 160.25 -40.99 REMARK 500 5 SER A 11 -65.35 75.20 REMARK 500 6 VAL A 5 112.28 -173.00 REMARK 500 6 ASN A 7 -22.41 -155.07 REMARK 500 6 LEU A 8 50.40 -165.32 REMARK 500 6 LYS A 10 163.36 56.56 REMARK 500 6 SER A 11 -31.85 -153.39 REMARK 500 7 VAL A 5 115.78 -172.40 REMARK 500 7 ASN A 7 -15.37 -164.81 REMARK 500 7 LEU A 8 49.02 -170.24 REMARK 500 7 SER A 11 90.72 49.97 REMARK 500 8 ILE A 4 -70.23 -93.11 REMARK 500 8 VAL A 5 126.17 -172.96 REMARK 500 8 ASN A 7 -26.27 -156.05 REMARK 500 8 LEU A 8 55.34 -173.18 REMARK 500 9 PRO A 3 33.76 -77.30 REMARK 500 9 ILE A 4 -48.25 -144.36 REMARK 500 9 VAL A 5 48.38 -154.31 REMARK 500 9 ASN A 7 51.02 -94.41 REMARK 500 9 LEU A 8 74.43 66.46 REMARK 500 9 LYS A 10 -123.91 61.15 REMARK 500 9 SER A 11 81.16 48.95 REMARK 500 9 LEU A 12 -8.43 -58.72 REMARK 500 REMARK 500 THIS ENTRY HAS 120 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34274 RELATED DB: BMRB REMARK 900 NMR STRUCTURE OF TEMPORIN B IN SDS MICELLES DBREF 6GIL A 1 13 PDB 6GIL 6GIL 1 13 SEQRES 1 A 13 LEU LEU PRO ILE VAL GLY ASN LEU LEU LYS SER LEU LEU CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1