HEADER ISOMERASE 17-MAY-18 6GJX OBSLTE 15-APR-20 6GJX 6YBM TITLE SCAFFOLD-LIGAND COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE F, MITOCHONDRIAL; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: PPIASE F,CYCLOPHILIN D,CYPD,CYCLOPHILIN F,MITOCHONDRIAL COMPND 5 CYCLOPHILIN,CYP-M,ROTAMASE F; COMPND 6 EC: 5.2.1.8; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPIF, CYP3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.ZACHARCHENKO,L.Y.LIAN REVDAT 3 15-APR-20 6GJX 1 OBSLTE JRNL REVDAT 2 13-NOV-19 6GJX 1 TITLE REVDAT 1 29-MAY-19 6GJX 0 JRNL AUTH T.ZACHARCHENKO,L.Y.LIAN JRNL TITL SCAFFOLD-LIGAND COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 62.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 118024 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 5831 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 62.7618 - 4.3807 1.00 3885 221 0.1432 0.1440 REMARK 3 2 4.3807 - 3.4772 1.00 3814 176 0.1228 0.1319 REMARK 3 3 3.4772 - 3.0376 1.00 3851 167 0.1375 0.1661 REMARK 3 4 3.0376 - 2.7599 1.00 3795 161 0.1450 0.1656 REMARK 3 5 2.7599 - 2.5621 1.00 3739 193 0.1419 0.1747 REMARK 3 6 2.5621 - 2.4110 1.00 3772 220 0.1363 0.1833 REMARK 3 7 2.4110 - 2.2903 1.00 3757 198 0.1279 0.1505 REMARK 3 8 2.2903 - 2.1906 0.99 3717 212 0.1245 0.1639 REMARK 3 9 2.1906 - 2.1062 1.00 3774 174 0.1257 0.1748 REMARK 3 10 2.1062 - 2.0336 1.00 3738 208 0.1252 0.1867 REMARK 3 11 2.0336 - 1.9700 1.00 3708 216 0.1285 0.1609 REMARK 3 12 1.9700 - 1.9137 1.00 3738 211 0.1270 0.1705 REMARK 3 13 1.9137 - 1.8633 1.00 3747 190 0.1419 0.1850 REMARK 3 14 1.8633 - 1.8178 1.00 3780 170 0.1480 0.2063 REMARK 3 15 1.8178 - 1.7765 1.00 3690 174 0.1485 0.1681 REMARK 3 16 1.7765 - 1.7387 1.00 3789 191 0.1556 0.2115 REMARK 3 17 1.7387 - 1.7039 1.00 3743 202 0.1702 0.2216 REMARK 3 18 1.7039 - 1.6717 1.00 3744 186 0.1736 0.2617 REMARK 3 19 1.6717 - 1.6419 1.00 3714 199 0.1776 0.2638 REMARK 3 20 1.6419 - 1.6140 1.00 3700 193 0.1865 0.2315 REMARK 3 21 1.6140 - 1.5880 1.00 3771 195 0.1966 0.2668 REMARK 3 22 1.5880 - 1.5636 1.00 3748 199 0.2076 0.2499 REMARK 3 23 1.5636 - 1.5406 1.00 3722 161 0.2205 0.2920 REMARK 3 24 1.5406 - 1.5189 1.00 3751 213 0.2353 0.3179 REMARK 3 25 1.5189 - 1.4983 1.00 3672 204 0.2457 0.2726 REMARK 3 26 1.4983 - 1.4789 1.00 3755 187 0.2579 0.2955 REMARK 3 27 1.4789 - 1.4604 0.99 3681 207 0.2612 0.2917 REMARK 3 28 1.4604 - 1.4428 0.99 3663 193 0.2646 0.2851 REMARK 3 29 1.4428 - 1.4260 0.98 3657 200 0.2976 0.3114 REMARK 3 30 1.4260 - 1.4100 0.96 3578 210 0.3232 0.3618 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3995 REMARK 3 ANGLE : 0.898 5389 REMARK 3 CHIRALITY : 0.078 575 REMARK 3 PLANARITY : 0.005 697 REMARK 3 DIHEDRAL : 18.371 1484 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GJX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1200010083. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JAN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 118357 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.410 REMARK 200 RESOLUTION RANGE LOW (A) : 62.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.41 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.58800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5CBT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 0.1 M SODIUM REMARK 280 CITRATE TRIBASIC DIHYDRATE PH 5.6, 30% V/V (+/-)-2-METHYL-2,4- REMARK 280 PENTANEDIO, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 62.76050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.31750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 62.76050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.31750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 442 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 465 MET C 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 525 O HOH B 417 2.12 REMARK 500 O HOH B 315 O HOH C 311 2.12 REMARK 500 O HOH A 303 O HOH A 310 2.15 REMARK 500 O HOH C 419 O HOH C 451 2.16 REMARK 500 O HOH B 392 O HOH C 444 2.16 REMARK 500 O HOH C 323 O HOH C 356 2.16 REMARK 500 O HOH A 406 O HOH A 493 2.17 REMARK 500 O HOH C 337 O HOH C 456 2.18 REMARK 500 O HOH B 387 O HOH C 357 2.19 REMARK 500 O HOH A 475 O HOH A 497 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 60 -81.74 -145.68 REMARK 500 THR A 119 62.02 -114.05 REMARK 500 PHE B 60 -80.74 -146.90 REMARK 500 PHE C 60 -80.82 -144.06 REMARK 500 HIS C 70 18.48 59.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 526 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH B 418 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH C 483 DISTANCE = 6.45 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F2E A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F2E B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F2E C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 203 DBREF 6GJX A 2 165 UNP P30405 PPIF_HUMAN 44 207 DBREF 6GJX B 2 165 UNP P30405 PPIF_HUMAN 44 207 DBREF 6GJX C 2 165 UNP P30405 PPIF_HUMAN 44 207 SEQADV 6GJX MET A 1 UNP P30405 INITIATING METHIONINE SEQADV 6GJX ILE A 133 UNP P30405 LYS 175 CONFLICT SEQADV 6GJX MET B 1 UNP P30405 INITIATING METHIONINE SEQADV 6GJX ILE B 133 UNP P30405 LYS 175 CONFLICT SEQADV 6GJX MET C 1 UNP P30405 INITIATING METHIONINE SEQADV 6GJX ILE C 133 UNP P30405 LYS 175 CONFLICT SEQRES 1 A 165 MET GLY ASN PRO LEU VAL TYR LEU ASP VAL ASP ALA ASN SEQRES 2 A 165 GLY LYS PRO LEU GLY ARG VAL VAL LEU GLU LEU LYS ALA SEQRES 3 A 165 ASP VAL VAL PRO LYS THR ALA GLU ASN PHE ARG ALA LEU SEQRES 4 A 165 CYS THR GLY GLU LYS GLY PHE GLY TYR LYS GLY SER THR SEQRES 5 A 165 PHE HIS ARG VAL ILE PRO SER PHE MET CYS GLN ALA GLY SEQRES 6 A 165 ASP PHE THR ASN HIS ASN GLY THR GLY GLY LYS SER ILE SEQRES 7 A 165 TYR GLY SER ARG PHE PRO ASP GLU ASN PHE THR LEU LYS SEQRES 8 A 165 HIS VAL GLY PRO GLY VAL LEU SER MET ALA ASN ALA GLY SEQRES 9 A 165 PRO ASN THR ASN GLY SER GLN PHE PHE ILE CYS THR ILE SEQRES 10 A 165 LYS THR ASP TRP LEU ASP GLY LYS HIS VAL VAL PHE GLY SEQRES 11 A 165 HIS VAL ILE GLU GLY MET ASP VAL VAL LYS LYS ILE GLU SEQRES 12 A 165 SER PHE GLY SER LYS SER GLY ARG THR SER LYS LYS ILE SEQRES 13 A 165 VAL ILE THR ASP CYS GLY GLN LEU SER SEQRES 1 B 165 MET GLY ASN PRO LEU VAL TYR LEU ASP VAL ASP ALA ASN SEQRES 2 B 165 GLY LYS PRO LEU GLY ARG VAL VAL LEU GLU LEU LYS ALA SEQRES 3 B 165 ASP VAL VAL PRO LYS THR ALA GLU ASN PHE ARG ALA LEU SEQRES 4 B 165 CYS THR GLY GLU LYS GLY PHE GLY TYR LYS GLY SER THR SEQRES 5 B 165 PHE HIS ARG VAL ILE PRO SER PHE MET CYS GLN ALA GLY SEQRES 6 B 165 ASP PHE THR ASN HIS ASN GLY THR GLY GLY LYS SER ILE SEQRES 7 B 165 TYR GLY SER ARG PHE PRO ASP GLU ASN PHE THR LEU LYS SEQRES 8 B 165 HIS VAL GLY PRO GLY VAL LEU SER MET ALA ASN ALA GLY SEQRES 9 B 165 PRO ASN THR ASN GLY SER GLN PHE PHE ILE CYS THR ILE SEQRES 10 B 165 LYS THR ASP TRP LEU ASP GLY LYS HIS VAL VAL PHE GLY SEQRES 11 B 165 HIS VAL ILE GLU GLY MET ASP VAL VAL LYS LYS ILE GLU SEQRES 12 B 165 SER PHE GLY SER LYS SER GLY ARG THR SER LYS LYS ILE SEQRES 13 B 165 VAL ILE THR ASP CYS GLY GLN LEU SER SEQRES 1 C 165 MET GLY ASN PRO LEU VAL TYR LEU ASP VAL ASP ALA ASN SEQRES 2 C 165 GLY LYS PRO LEU GLY ARG VAL VAL LEU GLU LEU LYS ALA SEQRES 3 C 165 ASP VAL VAL PRO LYS THR ALA GLU ASN PHE ARG ALA LEU SEQRES 4 C 165 CYS THR GLY GLU LYS GLY PHE GLY TYR LYS GLY SER THR SEQRES 5 C 165 PHE HIS ARG VAL ILE PRO SER PHE MET CYS GLN ALA GLY SEQRES 6 C 165 ASP PHE THR ASN HIS ASN GLY THR GLY GLY LYS SER ILE SEQRES 7 C 165 TYR GLY SER ARG PHE PRO ASP GLU ASN PHE THR LEU LYS SEQRES 8 C 165 HIS VAL GLY PRO GLY VAL LEU SER MET ALA ASN ALA GLY SEQRES 9 C 165 PRO ASN THR ASN GLY SER GLN PHE PHE ILE CYS THR ILE SEQRES 10 C 165 LYS THR ASP TRP LEU ASP GLY LYS HIS VAL VAL PHE GLY SEQRES 11 C 165 HIS VAL ILE GLU GLY MET ASP VAL VAL LYS LYS ILE GLU SEQRES 12 C 165 SER PHE GLY SER LYS SER GLY ARG THR SER LYS LYS ILE SEQRES 13 C 165 VAL ILE THR ASP CYS GLY GLN LEU SER HET F2E A 201 34 HET EDO A 202 4 HET CIT A 203 13 HET F2E B 201 34 HET F2E C 201 34 HET EDO C 202 4 HET EDO C 203 4 HETNAM F2E 1-[(4-AMINOPHENYL)METHYL]-3-[(2~{S},3~{R})-1-[2-(2- HETNAM 2 F2E BROMOPHENYL)PYRAZOLIDIN-1-YL]-1-OXIDANYLIDENE-3-(3- HETNAM 3 F2E OXIDANYLPROPOXY)BUTAN-2-YL]UREA HETNAM EDO 1,2-ETHANEDIOL HETNAM CIT CITRIC ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 4 F2E 3(C24 H32 BR N5 O4) FORMUL 5 EDO 3(C2 H6 O2) FORMUL 6 CIT C6 H8 O7 FORMUL 11 HOH *527(H2 O) HELIX 1 AA1 VAL A 29 GLY A 42 1 14 HELIX 2 AA2 THR A 119 ASP A 123 5 5 HELIX 3 AA3 GLY A 135 PHE A 145 1 11 HELIX 4 AA4 VAL B 29 GLY B 42 1 14 HELIX 5 AA5 THR B 119 ASP B 123 5 5 HELIX 6 AA6 GLY B 135 PHE B 145 1 11 HELIX 7 AA7 VAL C 29 GLY C 42 1 14 HELIX 8 AA8 THR C 119 ASP C 123 5 5 HELIX 9 AA9 GLY C 135 PHE C 145 1 11 SHEET 1 AA1 8 PHE A 53 ILE A 57 0 SHEET 2 AA1 8 MET A 61 ALA A 64 -1 O GLN A 63 N ARG A 55 SHEET 3 AA1 8 PHE A 112 CYS A 115 -1 O PHE A 112 N ALA A 64 SHEET 4 AA1 8 VAL A 97 MET A 100 -1 N SER A 99 O PHE A 113 SHEET 5 AA1 8 VAL A 128 GLU A 134 -1 O PHE A 129 N LEU A 98 SHEET 6 AA1 8 LYS A 15 LEU A 24 -1 N VAL A 21 O ILE A 133 SHEET 7 AA1 8 LEU A 5 ALA A 12 -1 N VAL A 10 O LEU A 17 SHEET 8 AA1 8 ILE A 156 GLN A 163 -1 O ASP A 160 N ASP A 9 SHEET 1 AA2 8 ARG B 55 ILE B 57 0 SHEET 2 AA2 8 MET B 61 ALA B 64 -1 O GLN B 63 N ARG B 55 SHEET 3 AA2 8 PHE B 112 CYS B 115 -1 O PHE B 112 N ALA B 64 SHEET 4 AA2 8 VAL B 97 MET B 100 -1 N SER B 99 O PHE B 113 SHEET 5 AA2 8 VAL B 128 GLU B 134 -1 O PHE B 129 N LEU B 98 SHEET 6 AA2 8 LYS B 15 LEU B 24 -1 N VAL B 21 O GLU B 134 SHEET 7 AA2 8 LEU B 5 ALA B 12 -1 N VAL B 10 O LEU B 17 SHEET 8 AA2 8 ILE B 156 LEU B 164 -1 O VAL B 157 N ASP B 11 SHEET 1 AA3 8 PHE C 53 ILE C 57 0 SHEET 2 AA3 8 MET C 61 ALA C 64 -1 O GLN C 63 N ARG C 55 SHEET 3 AA3 8 PHE C 112 CYS C 115 -1 O PHE C 112 N ALA C 64 SHEET 4 AA3 8 VAL C 97 MET C 100 -1 N SER C 99 O PHE C 113 SHEET 5 AA3 8 VAL C 128 GLU C 134 -1 O PHE C 129 N LEU C 98 SHEET 6 AA3 8 LYS C 15 LEU C 24 -1 N VAL C 21 O GLU C 134 SHEET 7 AA3 8 LEU C 5 ALA C 12 -1 N VAL C 10 O LEU C 17 SHEET 8 AA3 8 ILE C 156 LEU C 164 -1 O ASP C 160 N ASP C 9 SITE 1 AC1 17 ARG A 55 PHE A 60 MET A 61 GLN A 63 SITE 2 AC1 17 GLY A 72 ALA A 101 ASN A 102 THR A 107 SITE 3 AC1 17 GLN A 111 PHE A 113 HIS A 126 HOH A 304 SITE 4 AC1 17 HOH A 307 HOH A 384 ARG B 55 LYS B 148 SITE 5 AC1 17 SER B 149 SITE 1 AC2 8 ASN A 13 SER A 153 LYS A 154 HOH A 322 SITE 2 AC2 8 HOH A 376 LYS C 125 ARG C 151 THR C 152 SITE 1 AC3 12 ARG A 151 LYS A 155 HOH A 302 HOH A 308 SITE 2 AC3 12 HOH A 309 HOH A 323 HOH A 337 HOH A 347 SITE 3 AC3 12 PRO B 105 GLY C 104 PRO C 105 ARG C 151 SITE 1 AC4 19 ARG A 55 LYS A 148 SER A 149 HOH A 415 SITE 2 AC4 19 ARG B 55 PHE B 60 MET B 61 GLN B 63 SITE 3 AC4 19 GLY B 72 ALA B 101 ASN B 102 ALA B 103 SITE 4 AC4 19 GLY B 104 THR B 107 GLY B 109 GLN B 111 SITE 5 AC4 19 PHE B 113 HIS B 126 HOH B 379 SITE 1 AC5 18 ARG C 55 PHE C 60 MET C 61 GLN C 63 SITE 2 AC5 18 GLY C 72 ARG C 82 ALA C 101 ASN C 102 SITE 3 AC5 18 THR C 107 GLN C 111 PHE C 113 HIS C 126 SITE 4 AC5 18 LYS C 148 SER C 149 ARG C 151 HOH C 302 SITE 5 AC5 18 HOH C 305 HOH C 387 SITE 1 AC6 7 SER A 147 ARG A 151 LYS B 125 ASN C 13 SITE 2 AC6 7 SER C 153 HOH C 344 HOH C 424 SITE 1 AC7 4 TYR C 79 PRO C 84 HOH C 362 HOH C 382 CRYST1 125.521 58.635 103.293 90.00 124.85 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007967 0.000000 0.005548 0.00000 SCALE2 0.000000 0.017055 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011797 0.00000