HEADER LIPID TRANSPORT 21-MAY-18 6GKI TITLE STRUCTURE OF E COLI MLAC IN VARIOUSLY LOADED STATES COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE PHOSPHOLIPID-BINDING PROTEIN MLAC; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 GENE: MLAC, YRBC, B3192, JW3159; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS LIPID TRANSFER OUTER MEMBRANES, LIPID TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR T.J.KNOWLES,A.L.LOVERING REVDAT 4 17-JAN-24 6GKI 1 REMARK REVDAT 3 02-OCT-19 6GKI 1 JRNL REVDAT 2 04-SEP-19 6GKI 1 JRNL REVDAT 1 17-APR-19 6GKI 0 JRNL AUTH G.W.HUGHES,S.C.L.HALL,C.S.LAXTON,P.SRIDHAR,A.H.MAHADI, JRNL AUTH 2 C.HATTON,T.J.PIGGOT,P.J.WOTHERSPOON,A.C.LENEY,D.G.WARD, JRNL AUTH 3 M.JAMSHAD,V.SPANA,I.T.CADBY,C.HARDING,G.L.ISOM,J.A.BRYANT, JRNL AUTH 4 R.J.PARR,Y.YAKUB,M.JEEVES,D.HUBER,I.R.HENDERSON,L.A.CLIFTON, JRNL AUTH 5 A.L.LOVERING,T.J.KNOWLES JRNL TITL EVIDENCE FOR PHOSPHOLIPID EXPORT FROM THE BACTERIAL INNER JRNL TITL 2 MEMBRANE BY THE MLA ABC TRANSPORT SYSTEM. JRNL REF NAT MICROBIOL V. 4 1692 2019 JRNL REFN ESSN 2058-5276 JRNL PMID 31235958 JRNL DOI 10.1038/S41564-019-0481-Y REMARK 2 REMARK 2 RESOLUTION. 2.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0216 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 28511 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1573 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.23 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.29 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1886 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.69 REMARK 3 BIN R VALUE (WORKING SET) : 0.3490 REMARK 3 BIN FREE R VALUE SET COUNT : 82 REMARK 3 BIN FREE R VALUE : 0.3990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2985 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 75 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.25000 REMARK 3 B22 (A**2) : 1.25000 REMARK 3 B33 (A**2) : -4.06000 REMARK 3 B12 (A**2) : 0.63000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.199 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.179 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.157 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.017 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3119 ; 0.014 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2882 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4244 ; 1.571 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6713 ; 0.811 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 382 ; 5.079 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 152 ;39.229 ;24.737 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 545 ;14.608 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;15.055 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 461 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3484 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 616 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 24 206 B 24 206 5502 0.150 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 23 A 207 REMARK 3 ORIGIN FOR THE GROUP (A): 64.5430 27.2240 34.0200 REMARK 3 T TENSOR REMARK 3 T11: 0.0217 T22: 0.0138 REMARK 3 T33: 0.0416 T12: 0.0007 REMARK 3 T13: -0.0151 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: 2.0325 L22: 0.5582 REMARK 3 L33: 3.1133 L12: 0.1383 REMARK 3 L13: 1.0862 L23: 0.5489 REMARK 3 S TENSOR REMARK 3 S11: 0.1908 S12: 0.0148 S13: -0.2243 REMARK 3 S21: -0.0197 S22: -0.0237 S23: -0.1097 REMARK 3 S31: 0.0782 S32: 0.1258 S33: -0.1671 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 24 B 208 REMARK 3 ORIGIN FOR THE GROUP (A): 42.6080 7.8510 49.0310 REMARK 3 T TENSOR REMARK 3 T11: 0.1855 T22: 0.0121 REMARK 3 T33: 0.0845 T12: -0.0288 REMARK 3 T13: 0.0388 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 1.1539 L22: 1.9440 REMARK 3 L33: 5.1935 L12: 0.2744 REMARK 3 L13: -0.7504 L23: 0.8071 REMARK 3 S TENSOR REMARK 3 S11: 0.1549 S12: -0.0502 S13: 0.0509 REMARK 3 S21: -0.0674 S22: 0.0367 S23: -0.1670 REMARK 3 S31: -0.1696 S32: 0.2153 S33: -0.1916 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 6GKI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1200010126. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97951 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30115 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.230 REMARK 200 RESOLUTION RANGE LOW (A) : 52.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 18.60 REMARK 200 R MERGE (I) : 0.11300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.10 REMARK 200 R MERGE FOR SHELL (I) : 2.49200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5UWA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SEED GROWN IN (0.1M NA CACODYLATE PH REMARK 280 6.5, 2M AMMONIUM SULPHATE, 0.2M NACL) SEED TRANSFERRED TO DROP REMARK 280 OF (0.09M NAF/BR/I, 0.1M TRIS/BICINE PH 8.5, 20% GLYCEROL, 10% REMARK 280 PEG 4000), VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.13667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 64.27333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 64.27333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 32.13667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 411 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 22 REMARK 465 GLU A 208 REMARK 465 GLU A 209 REMARK 465 LYS A 210 REMARK 465 LYS A 211 REMARK 465 LEU A 212 REMARK 465 GLU A 213 REMARK 465 HIS A 214 REMARK 465 HIS A 215 REMARK 465 HIS A 216 REMARK 465 HIS A 217 REMARK 465 HIS A 218 REMARK 465 HIS A 219 REMARK 465 ALA B 22 REMARK 465 ASP B 23 REMARK 465 GLU B 209 REMARK 465 LYS B 210 REMARK 465 LYS B 211 REMARK 465 LEU B 212 REMARK 465 GLU B 213 REMARK 465 HIS B 214 REMARK 465 HIS B 215 REMARK 465 HIS B 216 REMARK 465 HIS B 217 REMARK 465 HIS B 218 REMARK 465 HIS B 219 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 432 O HOH A 449 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 BR BR A 301 O HOH A 452 3664 1.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 115 150.93 -45.92 REMARK 500 GLU A 169 58.96 39.95 REMARK 500 ASN B 52 93.46 -161.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BR B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 305 DBREF 6GKI A 22 211 UNP P0ADV7 MLAC_ECOLI 22 211 DBREF 6GKI B 22 211 UNP P0ADV7 MLAC_ECOLI 22 211 SEQADV 6GKI LEU A 212 UNP P0ADV7 EXPRESSION TAG SEQADV 6GKI GLU A 213 UNP P0ADV7 EXPRESSION TAG SEQADV 6GKI HIS A 214 UNP P0ADV7 EXPRESSION TAG SEQADV 6GKI HIS A 215 UNP P0ADV7 EXPRESSION TAG SEQADV 6GKI HIS A 216 UNP P0ADV7 EXPRESSION TAG SEQADV 6GKI HIS A 217 UNP P0ADV7 EXPRESSION TAG SEQADV 6GKI HIS A 218 UNP P0ADV7 EXPRESSION TAG SEQADV 6GKI HIS A 219 UNP P0ADV7 EXPRESSION TAG SEQADV 6GKI LEU B 212 UNP P0ADV7 EXPRESSION TAG SEQADV 6GKI GLU B 213 UNP P0ADV7 EXPRESSION TAG SEQADV 6GKI HIS B 214 UNP P0ADV7 EXPRESSION TAG SEQADV 6GKI HIS B 215 UNP P0ADV7 EXPRESSION TAG SEQADV 6GKI HIS B 216 UNP P0ADV7 EXPRESSION TAG SEQADV 6GKI HIS B 217 UNP P0ADV7 EXPRESSION TAG SEQADV 6GKI HIS B 218 UNP P0ADV7 EXPRESSION TAG SEQADV 6GKI HIS B 219 UNP P0ADV7 EXPRESSION TAG SEQRES 1 A 198 ALA ASP GLN THR ASN PRO TYR LYS LEU MET ASP GLU ALA SEQRES 2 A 198 ALA GLN LYS THR PHE ASP ARG LEU LYS ASN GLU GLN PRO SEQRES 3 A 198 GLN ILE ARG ALA ASN PRO ASP TYR LEU ARG THR ILE VAL SEQRES 4 A 198 ASP GLN GLU LEU LEU PRO TYR VAL GLN VAL LYS TYR ALA SEQRES 5 A 198 GLY ALA LEU VAL LEU GLY GLN TYR TYR LYS SER ALA THR SEQRES 6 A 198 PRO ALA GLN ARG GLU ALA TYR PHE ALA ALA PHE ARG GLU SEQRES 7 A 198 TYR LEU LYS GLN ALA TYR GLY GLN ALA LEU ALA MET TYR SEQRES 8 A 198 HIS GLY GLN THR TYR GLN ILE ALA PRO GLU GLN PRO LEU SEQRES 9 A 198 GLY ASP LYS THR ILE VAL PRO ILE ARG VAL THR ILE ILE SEQRES 10 A 198 ASP PRO ASN GLY ARG PRO PRO VAL ARG LEU ASP PHE GLN SEQRES 11 A 198 TRP ARG LYS ASN SER GLN THR GLY ASN TRP GLN ALA TYR SEQRES 12 A 198 ASP MET ILE ALA GLU GLY VAL SER MET ILE THR THR LYS SEQRES 13 A 198 GLN ASN GLU TRP GLY THR LEU LEU ARG THR LYS GLY ILE SEQRES 14 A 198 ASP GLY LEU THR ALA GLN LEU LYS SER ILE SER GLN GLN SEQRES 15 A 198 LYS ILE THR LEU GLU GLU LYS LYS LEU GLU HIS HIS HIS SEQRES 16 A 198 HIS HIS HIS SEQRES 1 B 198 ALA ASP GLN THR ASN PRO TYR LYS LEU MET ASP GLU ALA SEQRES 2 B 198 ALA GLN LYS THR PHE ASP ARG LEU LYS ASN GLU GLN PRO SEQRES 3 B 198 GLN ILE ARG ALA ASN PRO ASP TYR LEU ARG THR ILE VAL SEQRES 4 B 198 ASP GLN GLU LEU LEU PRO TYR VAL GLN VAL LYS TYR ALA SEQRES 5 B 198 GLY ALA LEU VAL LEU GLY GLN TYR TYR LYS SER ALA THR SEQRES 6 B 198 PRO ALA GLN ARG GLU ALA TYR PHE ALA ALA PHE ARG GLU SEQRES 7 B 198 TYR LEU LYS GLN ALA TYR GLY GLN ALA LEU ALA MET TYR SEQRES 8 B 198 HIS GLY GLN THR TYR GLN ILE ALA PRO GLU GLN PRO LEU SEQRES 9 B 198 GLY ASP LYS THR ILE VAL PRO ILE ARG VAL THR ILE ILE SEQRES 10 B 198 ASP PRO ASN GLY ARG PRO PRO VAL ARG LEU ASP PHE GLN SEQRES 11 B 198 TRP ARG LYS ASN SER GLN THR GLY ASN TRP GLN ALA TYR SEQRES 12 B 198 ASP MET ILE ALA GLU GLY VAL SER MET ILE THR THR LYS SEQRES 13 B 198 GLN ASN GLU TRP GLY THR LEU LEU ARG THR LYS GLY ILE SEQRES 14 B 198 ASP GLY LEU THR ALA GLN LEU LYS SER ILE SER GLN GLN SEQRES 15 B 198 LYS ILE THR LEU GLU GLU LYS LYS LEU GLU HIS HIS HIS SEQRES 16 B 198 HIS HIS HIS HET BR A 301 1 HET BR A 302 1 HET BR A 303 1 HET BR A 304 1 HET BR A 305 1 HET BR A 306 1 HET BR B 301 1 HET BR B 302 1 HET BR B 303 1 HET BR B 304 1 HET GOL B 305 6 HETNAM BR BROMIDE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 BR 10(BR 1-) FORMUL 13 GOL C3 H8 O3 FORMUL 14 HOH *75(H2 O) HELIX 1 AA1 ASN A 26 GLU A 45 1 20 HELIX 2 AA2 GLU A 45 ASN A 52 1 8 HELIX 3 AA3 ASP A 54 LEU A 64 1 11 HELIX 4 AA4 LEU A 65 VAL A 68 5 4 HELIX 5 AA5 GLN A 69 GLY A 79 1 11 HELIX 6 AA6 GLN A 80 TYR A 82 5 3 HELIX 7 AA7 THR A 86 LEU A 109 1 24 HELIX 8 AA8 ALA A 110 TYR A 112 5 3 HELIX 9 AA9 LYS A 177 GLN A 202 1 26 HELIX 10 AB1 ASN B 26 GLU B 45 1 20 HELIX 11 AB2 GLU B 45 ASN B 52 1 8 HELIX 12 AB3 ASP B 54 LEU B 64 1 11 HELIX 13 AB4 LEU B 65 VAL B 68 5 4 HELIX 14 AB5 GLN B 69 GLY B 79 1 11 HELIX 15 AB6 GLN B 80 ALA B 85 1 6 HELIX 16 AB7 THR B 86 ALA B 110 1 25 HELIX 17 AB8 MET B 173 GLN B 202 1 30 SHEET 1 AA1 5 TYR A 117 ILE A 119 0 SHEET 2 AA1 5 ILE A 130 ILE A 137 -1 O THR A 136 N GLN A 118 SHEET 3 AA1 5 VAL A 146 LYS A 154 -1 O LEU A 148 N VAL A 135 SHEET 4 AA1 5 TRP A 161 ALA A 168 -1 O GLN A 162 N ARG A 153 SHEET 5 AA1 5 VAL A 171 SER A 172 -1 O VAL A 171 N ALA A 168 SHEET 1 AA2 5 THR B 116 ILE B 119 0 SHEET 2 AA2 5 ILE B 130 ILE B 138 -1 O THR B 136 N GLN B 118 SHEET 3 AA2 5 VAL B 146 ASN B 155 -1 O VAL B 146 N ILE B 137 SHEET 4 AA2 5 ASN B 160 ALA B 168 -1 O GLN B 162 N ARG B 153 SHEET 5 AA2 5 VAL B 171 SER B 172 -1 O VAL B 171 N ALA B 168 SITE 1 AC1 4 PRO A 140 SER A 156 HOH A 402 HOH A 452 SITE 1 AC2 2 THR A 158 GLN B 157 SITE 1 AC3 2 ASN B 44 GLN B 48 SITE 1 AC4 5 THR A 86 PRO A 87 ALA A 88 ASN B 44 SITE 2 AC4 5 GLN B 62 SITE 1 AC5 1 ALA B 96 SITE 1 AC6 6 GLU A 91 HOH A 404 VAL B 68 VAL B 70 SITE 2 AC6 6 LYS B 71 ARG B 98 CRYST1 105.290 105.290 96.410 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009498 0.005483 0.000000 0.00000 SCALE2 0.000000 0.010967 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010372 0.00000