HEADER TRANSFERASE 23-MAY-18 6GLA TITLE CRYSTAL STRUCTURE OF JAK3 IN COMPLEX WITH COMPOUND 11 (FM481) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE JAK3; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: JANUS KINASE 3,JAK-3,LEUKOCYTE JANUS KINASE,L-JAK; COMPND 5 EC: 2.7.10.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: JAK3; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BACMID KEYWDS KINASE, JAK3, COVALENT INHIBITOR, REVERSIBLE COVALENT INHIBITOR, KEYWDS 2 INDUCED POCKET, ARGININE POCKET, STRUCTURAL GENOMICS CONSORTIUM, KEYWDS 3 SGC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.CHAIKUAD,M.FORSTER,F.VON DELFT,A.M.EDWARDS,C.H.ARROWSMITH, AUTHOR 2 C.BOUNTRA,S.A.LAUFER,S.KNAPP,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 3 17-JAN-24 6GLA 1 REMARK REVDAT 2 11-JUL-18 6GLA 1 JRNL REVDAT 1 27-JUN-18 6GLA 0 JRNL AUTH M.FORSTER,A.CHAIKUAD,T.DIMITROV,E.DORING,J.HOLSTEIN, JRNL AUTH 2 B.T.BERGER,M.GEHRINGER,K.GHORESCHI,S.MULLER,S.KNAPP, JRNL AUTH 3 S.A.LAUFER JRNL TITL DEVELOPMENT, OPTIMIZATION, AND STRUCTURE-ACTIVITY JRNL TITL 2 RELATIONSHIPS OF COVALENT-REVERSIBLE JAK3 INHIBITORS BASED JRNL TITL 3 ON A TRICYCLIC IMIDAZO[5,4- D]PYRROLO[2,3- B]PYRIDINE JRNL TITL 4 SCAFFOLD. JRNL REF J. MED. CHEM. V. 61 5350 2018 JRNL REFN ISSN 1520-4804 JRNL PMID 29852068 JRNL DOI 10.1021/ACS.JMEDCHEM.8B00571 REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 37123 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1928 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.92 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.97 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2714 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.02 REMARK 3 BIN R VALUE (WORKING SET) : 0.3580 REMARK 3 BIN FREE R VALUE SET COUNT : 119 REMARK 3 BIN FREE R VALUE : 0.3900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4566 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 106 REMARK 3 SOLVENT ATOMS : 233 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.04000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : 2.99000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.25000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.235 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.195 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.167 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.952 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4804 ; 0.017 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4568 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6484 ; 1.662 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10494 ; 1.226 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 575 ; 6.267 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 220 ;35.224 ;22.545 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 806 ;13.323 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 47 ;16.848 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 680 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5701 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1154 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2301 ; 1.233 ; 1.835 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2296 ; 1.233 ; 1.834 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2868 ; 2.095 ; 2.737 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2867 ; 2.095 ; 2.737 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2503 ; 1.476 ; 2.033 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2503 ; 1.476 ; 2.033 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3614 ; 2.431 ; 2.961 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5418 ; 4.917 ;14.872 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5419 ; 4.917 ;14.874 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 813 1103 B 813 1103 35108 0.06 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 813 A 990 REMARK 3 ORIGIN FOR THE GROUP (A): 5.8143 19.8829 -5.2975 REMARK 3 T TENSOR REMARK 3 T11: 0.0771 T22: 0.0455 REMARK 3 T33: 0.0207 T12: -0.0074 REMARK 3 T13: 0.0283 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 0.6353 L22: 0.1987 REMARK 3 L33: 0.5412 L12: -0.1702 REMARK 3 L13: 0.1020 L23: 0.1136 REMARK 3 S TENSOR REMARK 3 S11: 0.0047 S12: 0.0275 S13: 0.0197 REMARK 3 S21: -0.0038 S22: -0.0042 S23: -0.0329 REMARK 3 S31: 0.0206 S32: -0.0365 S33: -0.0005 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 991 A 1103 REMARK 3 ORIGIN FOR THE GROUP (A): 17.8807 21.9830 14.3147 REMARK 3 T TENSOR REMARK 3 T11: 0.0910 T22: 0.0702 REMARK 3 T33: 0.0186 T12: -0.0040 REMARK 3 T13: 0.0224 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 1.1462 L22: 0.7423 REMARK 3 L33: 0.3221 L12: 0.1549 REMARK 3 L13: 0.3495 L23: 0.1209 REMARK 3 S TENSOR REMARK 3 S11: -0.0193 S12: -0.1079 S13: -0.0625 REMARK 3 S21: 0.0961 S22: 0.0136 S23: -0.0307 REMARK 3 S31: -0.0142 S32: 0.0278 S33: 0.0057 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 813 B 990 REMARK 3 ORIGIN FOR THE GROUP (A): 3.7027 21.9251 44.9410 REMARK 3 T TENSOR REMARK 3 T11: 0.0994 T22: 0.0741 REMARK 3 T33: 0.0167 T12: -0.0037 REMARK 3 T13: 0.0332 T23: 0.0118 REMARK 3 L TENSOR REMARK 3 L11: 0.6211 L22: 0.2265 REMARK 3 L33: 0.6484 L12: -0.3502 REMARK 3 L13: 0.2004 L23: -0.0172 REMARK 3 S TENSOR REMARK 3 S11: 0.0603 S12: 0.0672 S13: 0.0475 REMARK 3 S21: -0.0211 S22: -0.0372 S23: -0.0279 REMARK 3 S31: 0.0391 S32: -0.0110 S33: -0.0230 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 991 B 1103 REMARK 3 ORIGIN FOR THE GROUP (A): 15.7460 23.6057 64.3919 REMARK 3 T TENSOR REMARK 3 T11: 0.0865 T22: 0.0965 REMARK 3 T33: 0.0079 T12: -0.0061 REMARK 3 T13: 0.0170 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 1.7496 L22: 1.1418 REMARK 3 L33: 0.2985 L12: 0.2517 REMARK 3 L13: 0.0774 L23: 0.0290 REMARK 3 S TENSOR REMARK 3 S11: 0.0131 S12: -0.1201 S13: -0.0402 REMARK 3 S21: 0.1005 S22: 0.0062 S23: -0.0340 REMARK 3 S31: 0.0082 S32: 0.0123 S33: -0.0193 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6GLA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1200010180. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAY-16 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.5-6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39077 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.920 REMARK 200 RESOLUTION RANGE LOW (A) : 52.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.14600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.52800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5LWM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24-30% PEG 3350, 0.1 M MES, PH 5.5-6.0 REMARK 280 AND 0.1-0.2 M MGCL2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.67900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 810 REMARK 465 MET A 811 REMARK 465 GLN A 812 REMARK 465 GLU A 985 REMARK 465 PRO A 986 REMARK 465 GLY A 987 REMARK 465 SER B 810 REMARK 465 MET B 811 REMARK 465 GLN B 812 REMARK 465 GLU B 985 REMARK 465 PRO B 986 REMARK 465 GLY B 987 REMARK 465 GLY B 1039 REMARK 465 SER B 1040 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 813 CG OD1 OD2 REMARK 470 ARG A 895 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 896 CG CD OE1 NE2 REMARK 470 ASP B 813 CG OD1 OD2 REMARK 470 ARG B 895 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 896 CG CD OE1 NE2 REMARK 470 GLU B1041 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 984 O HOH A 1301 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A1009 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 825 -60.67 -124.25 REMARK 500 ARG A 948 -4.70 74.06 REMARK 500 ALA A 966 -163.69 -126.69 REMARK 500 ASP A 967 84.37 45.61 REMARK 500 ILE B 825 -60.87 -123.28 REMARK 500 ARG B 948 -3.93 74.28 REMARK 500 ALA B 966 -166.17 -126.98 REMARK 500 ASP B 967 84.06 47.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F4B A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PHU A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F4B B 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PHU B 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6GL9 RELATED DB: PDB REMARK 900 RELATED ID: 6GLB RELATED DB: PDB DBREF 6GLA A 812 1103 UNP P52333 JAK3_HUMAN 812 1103 DBREF 6GLA B 812 1103 UNP P52333 JAK3_HUMAN 812 1103 SEQADV 6GLA SER A 810 UNP P52333 EXPRESSION TAG SEQADV 6GLA MET A 811 UNP P52333 EXPRESSION TAG SEQADV 6GLA ALA A 949 UNP P52333 ASP 949 CONFLICT SEQADV 6GLA SER A 1040 UNP P52333 CYS 1040 CONFLICT SEQADV 6GLA SER A 1048 UNP P52333 CYS 1048 CONFLICT SEQADV 6GLA SER B 810 UNP P52333 EXPRESSION TAG SEQADV 6GLA MET B 811 UNP P52333 EXPRESSION TAG SEQADV 6GLA ALA B 949 UNP P52333 ASP 949 CONFLICT SEQADV 6GLA SER B 1040 UNP P52333 CYS 1040 CONFLICT SEQADV 6GLA SER B 1048 UNP P52333 CYS 1048 CONFLICT SEQRES 1 A 294 SER MET GLN ASP PRO THR ILE PHE GLU GLU ARG HIS LEU SEQRES 2 A 294 LYS TYR ILE SER GLN LEU GLY LYS GLY ASN PHE GLY SER SEQRES 3 A 294 VAL GLU LEU CYS ARG TYR ASP PRO LEU GLY ASP ASN THR SEQRES 4 A 294 GLY ALA LEU VAL ALA VAL LYS GLN LEU GLN HIS SER GLY SEQRES 5 A 294 PRO ASP GLN GLN ARG ASP PHE GLN ARG GLU ILE GLN ILE SEQRES 6 A 294 LEU LYS ALA LEU HIS SER ASP PHE ILE VAL LYS TYR ARG SEQRES 7 A 294 GLY VAL SER TYR GLY PRO GLY ARG GLN SER LEU ARG LEU SEQRES 8 A 294 VAL MET GLU TYR LEU PRO SER GLY CYS LEU ARG ASP PHE SEQRES 9 A 294 LEU GLN ARG HIS ARG ALA ARG LEU ASP ALA SER ARG LEU SEQRES 10 A 294 LEU LEU TYR SER SER GLN ILE CYS LYS GLY MET GLU TYR SEQRES 11 A 294 LEU GLY SER ARG ARG CYS VAL HIS ARG ALA LEU ALA ALA SEQRES 12 A 294 ARG ASN ILE LEU VAL GLU SER GLU ALA HIS VAL LYS ILE SEQRES 13 A 294 ALA ASP PHE GLY LEU ALA LYS LEU LEU PRO LEU ASP LYS SEQRES 14 A 294 ASP TYR TYR VAL VAL ARG GLU PRO GLY GLN SER PRO ILE SEQRES 15 A 294 PHE TRP TYR ALA PRO GLU SER LEU SER ASP ASN ILE PHE SEQRES 16 A 294 SER ARG GLN SER ASP VAL TRP SER PHE GLY VAL VAL LEU SEQRES 17 A 294 TYR GLU LEU PHE THR TYR CYS ASP LYS SER CYS SER PRO SEQRES 18 A 294 SER ALA GLU PHE LEU ARG MET MET GLY SER GLU ARG ASP SEQRES 19 A 294 VAL PRO ALA LEU SER ARG LEU LEU GLU LEU LEU GLU GLU SEQRES 20 A 294 GLY GLN ARG LEU PRO ALA PRO PRO ALA CYS PRO ALA GLU SEQRES 21 A 294 VAL HIS GLU LEU MET LYS LEU CYS TRP ALA PRO SER PRO SEQRES 22 A 294 GLN ASP ARG PRO SER PHE SER ALA LEU GLY PRO GLN LEU SEQRES 23 A 294 ASP MET LEU TRP SER GLY SER ARG SEQRES 1 B 294 SER MET GLN ASP PRO THR ILE PHE GLU GLU ARG HIS LEU SEQRES 2 B 294 LYS TYR ILE SER GLN LEU GLY LYS GLY ASN PHE GLY SER SEQRES 3 B 294 VAL GLU LEU CYS ARG TYR ASP PRO LEU GLY ASP ASN THR SEQRES 4 B 294 GLY ALA LEU VAL ALA VAL LYS GLN LEU GLN HIS SER GLY SEQRES 5 B 294 PRO ASP GLN GLN ARG ASP PHE GLN ARG GLU ILE GLN ILE SEQRES 6 B 294 LEU LYS ALA LEU HIS SER ASP PHE ILE VAL LYS TYR ARG SEQRES 7 B 294 GLY VAL SER TYR GLY PRO GLY ARG GLN SER LEU ARG LEU SEQRES 8 B 294 VAL MET GLU TYR LEU PRO SER GLY CYS LEU ARG ASP PHE SEQRES 9 B 294 LEU GLN ARG HIS ARG ALA ARG LEU ASP ALA SER ARG LEU SEQRES 10 B 294 LEU LEU TYR SER SER GLN ILE CYS LYS GLY MET GLU TYR SEQRES 11 B 294 LEU GLY SER ARG ARG CYS VAL HIS ARG ALA LEU ALA ALA SEQRES 12 B 294 ARG ASN ILE LEU VAL GLU SER GLU ALA HIS VAL LYS ILE SEQRES 13 B 294 ALA ASP PHE GLY LEU ALA LYS LEU LEU PRO LEU ASP LYS SEQRES 14 B 294 ASP TYR TYR VAL VAL ARG GLU PRO GLY GLN SER PRO ILE SEQRES 15 B 294 PHE TRP TYR ALA PRO GLU SER LEU SER ASP ASN ILE PHE SEQRES 16 B 294 SER ARG GLN SER ASP VAL TRP SER PHE GLY VAL VAL LEU SEQRES 17 B 294 TYR GLU LEU PHE THR TYR CYS ASP LYS SER CYS SER PRO SEQRES 18 B 294 SER ALA GLU PHE LEU ARG MET MET GLY SER GLU ARG ASP SEQRES 19 B 294 VAL PRO ALA LEU SER ARG LEU LEU GLU LEU LEU GLU GLU SEQRES 20 B 294 GLY GLN ARG LEU PRO ALA PRO PRO ALA CYS PRO ALA GLU SEQRES 21 B 294 VAL HIS GLU LEU MET LYS LEU CYS TRP ALA PRO SER PRO SEQRES 22 B 294 GLN ASP ARG PRO SER PHE SER ALA LEU GLY PRO GLN LEU SEQRES 23 B 294 ASP MET LEU TRP SER GLY SER ARG HET F4B A1201 27 HET PHU A1202 10 HET EDO A1203 4 HET EDO A1204 4 HET EDO A1205 4 HET EDO A1206 4 HET EDO A1207 4 HET EDO A1208 4 HET F4B B1201 27 HET PHU B1202 10 HET EDO B1203 4 HET EDO B1204 4 HETNAM F4B (~{E})-3-[5-(3-CYCLOHEXYL-3,5,8,10- HETNAM 2 F4B TETRAZATRICYCLO[7.3.0.0^{2,6}]DODECA-1(9),2(6),4,7,11- HETNAM 3 F4B PENTAEN-4-YL)FURAN-2-YL]PROP-2-ENENITRILE HETNAM PHU 1-PHENYLUREA HETNAM EDO 1,2-ETHANEDIOL HETSYN PHU PHENYLUREA HETSYN EDO ETHYLENE GLYCOL FORMUL 3 F4B 2(C21 H19 N5 O) FORMUL 4 PHU 2(C7 H8 N2 O) FORMUL 5 EDO 8(C2 H6 O2) FORMUL 15 HOH *233(H2 O) HELIX 1 AA1 GLU A 818 ARG A 820 5 3 HELIX 2 AA2 GLY A 861 LEU A 878 1 18 HELIX 3 AA3 CYS A 909 ARG A 918 1 10 HELIX 4 AA4 ALA A 919 LEU A 921 5 3 HELIX 5 AA5 ASP A 922 ARG A 943 1 22 HELIX 6 AA6 ALA A 951 ARG A 953 5 3 HELIX 7 AA7 PRO A 990 TYR A 994 5 5 HELIX 8 AA8 ALA A 995 ASN A 1002 1 8 HELIX 9 AA9 SER A 1005 THR A 1022 1 18 HELIX 10 AB1 ASP A 1025 CYS A 1028 5 4 HELIX 11 AB2 SER A 1029 MET A 1038 1 10 HELIX 12 AB3 PRO A 1045 GLU A 1056 1 12 HELIX 13 AB4 PRO A 1067 TRP A 1078 1 12 HELIX 14 AB5 SER A 1081 ARG A 1085 5 5 HELIX 15 AB6 SER A 1087 SER A 1102 1 16 HELIX 16 AB7 GLY B 861 LEU B 878 1 18 HELIX 17 AB8 CYS B 909 ARG B 918 1 10 HELIX 18 AB9 ALA B 919 LEU B 921 5 3 HELIX 19 AC1 ASP B 922 ARG B 943 1 22 HELIX 20 AC2 ALA B 951 ARG B 953 5 3 HELIX 21 AC3 PRO B 990 TYR B 994 5 5 HELIX 22 AC4 ALA B 995 ASN B 1002 1 8 HELIX 23 AC5 SER B 1005 THR B 1022 1 18 HELIX 24 AC6 ASP B 1025 CYS B 1028 5 4 HELIX 25 AC7 SER B 1029 MET B 1037 1 9 HELIX 26 AC8 PRO B 1045 GLU B 1056 1 12 HELIX 27 AC9 PRO B 1067 TRP B 1078 1 12 HELIX 28 AD1 SER B 1081 ARG B 1085 5 5 HELIX 29 AD2 SER B 1087 GLY B 1101 1 15 SHEET 1 AA1 5 LEU A 822 LYS A 830 0 SHEET 2 AA1 5 GLY A 834 TYR A 841 -1 O LEU A 838 N SER A 826 SHEET 3 AA1 5 ALA A 850 LEU A 857 -1 O ALA A 850 N TYR A 841 SHEET 4 AA1 5 ARG A 899 GLU A 903 -1 O MET A 902 N ALA A 853 SHEET 5 AA1 5 TYR A 886 SER A 890 -1 N GLY A 888 O VAL A 901 SHEET 1 AA2 2 CYS A 945 VAL A 946 0 SHEET 2 AA2 2 LYS A 972 LEU A 973 -1 O LYS A 972 N VAL A 946 SHEET 1 AA3 2 ILE A 955 SER A 959 0 SHEET 2 AA3 2 HIS A 962 ILE A 965 -1 O LYS A 964 N LEU A 956 SHEET 1 AA4 2 TYR A 981 VAL A 982 0 SHEET 2 AA4 2 ILE A1003 PHE A1004 -1 O PHE A1004 N TYR A 981 SHEET 1 AA5 6 ILE B 816 GLU B 818 0 SHEET 2 AA5 6 TYR B 886 TYR B 891 1 O VAL B 889 N PHE B 817 SHEET 3 AA5 6 ARG B 899 MET B 902 -1 O VAL B 901 N GLY B 888 SHEET 4 AA5 6 ALA B 850 LEU B 857 -1 N ALA B 853 O MET B 902 SHEET 5 AA5 6 GLY B 834 TYR B 841 -1 N TYR B 841 O ALA B 850 SHEET 6 AA5 6 LEU B 822 LYS B 830 -1 N LEU B 828 O VAL B 836 SHEET 1 AA6 2 CYS B 945 VAL B 946 0 SHEET 2 AA6 2 LYS B 972 LEU B 973 -1 O LYS B 972 N VAL B 946 SHEET 1 AA7 2 ILE B 955 SER B 959 0 SHEET 2 AA7 2 HIS B 962 ILE B 965 -1 O LYS B 964 N LEU B 956 SHEET 1 AA8 2 TYR B 981 VAL B 982 0 SHEET 2 AA8 2 ILE B1003 PHE B1004 -1 O PHE B1004 N TYR B 981 SITE 1 AC1 13 LEU A 828 ALA A 853 GLU A 903 TYR A 904 SITE 2 AC1 13 LEU A 905 CYS A 909 ARG A 911 ASP A 912 SITE 3 AC1 13 ARG A 953 ASN A 954 LEU A 956 EDO A1204 SITE 4 AC1 13 HOH A1374 SITE 1 AC2 5 TRP A1011 ARG A1059 LEU A1060 TRP A1078 SITE 2 AC2 5 HOH A1342 SITE 1 AC3 3 GLN A 827 GLY A 829 LYS A 830 SITE 1 AC4 3 LYS A 855 F4B A1201 HOH A1376 SITE 1 AC5 6 TYR A 994 ALA A 995 SER A 998 SER A1008 SITE 2 AC5 6 ASP A1009 SER A1012 SITE 1 AC6 3 ARG A 840 ASN A 847 ARG A 984 SITE 1 AC7 5 ARG A 911 GLU A1019 CYS A1024 SER A1029 SITE 2 AC7 5 HOH A1373 SITE 1 AC8 4 SER A 989 PRO A 990 ILE A 991 HOH A1317 SITE 1 AC9 12 LEU B 828 VAL B 836 ALA B 853 GLU B 903 SITE 2 AC9 12 TYR B 904 LEU B 905 CYS B 909 ARG B 911 SITE 3 AC9 12 ASP B 912 ARG B 953 LEU B 956 HOH B1353 SITE 1 AD1 7 TRP B1011 PRO B1030 MET B1037 ARG B1059 SITE 2 AD1 7 LEU B1060 TRP B1078 HOH B1352 SITE 1 AD2 5 LYS B 830 GLY B 834 LYS B 855 HOH B1332 SITE 2 AD2 5 HOH B1392 SITE 1 AD3 7 TYR B 994 ALA B 995 SER B 998 PHE B1004 SITE 2 AD3 7 SER B1008 ASP B1009 SER B1012 CRYST1 41.951 61.358 100.434 90.00 92.37 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023837 0.000000 0.000986 0.00000 SCALE2 0.000000 0.016298 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009965 0.00000