HEADER HYDROLASE 23-MAY-18 6GLR TITLE CRYSTAL STRUCTURE OF HMTH1 N33G IN COMPLEX WITH TH SCAFFOLD 1 IN THE TITLE 2 PRESENCE OF ACETATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 2-HYDROXY-DATP DIPHOSPHATASE,8-OXO-DGTPASE,NUCLEOSIDE COMPND 5 DIPHOSPHATE-LINKED MOIETY X MOTIF 1,NUDIX MOTIF 1; COMPND 6 EC: 3.6.1.55,3.6.1.56; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NUDT1, MTH1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS INHIBITOR, COMPLEX, HYDROLASE, DNA REPAIR, FRAGMENT EXPDTA X-RAY DIFFRACTION AUTHOR S.A.EBERLE,L.WIEDMER,P.SLEDZ,A.CAFLISCH REVDAT 1 20-FEB-19 6GLR 0 JRNL AUTH S.A.EBERLE,L.WIEDMER,P.SLEDZ,A.CAFLISCH JRNL TITL HMTH1 N33G IN COMPLEX WITH TH SCAFFOLD 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 36177 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.530 REMARK 3 FREE R VALUE TEST SET COUNT : 2001 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.8129 - 3.8568 0.98 2603 147 0.1608 0.1703 REMARK 3 2 3.8568 - 3.0615 0.98 2479 143 0.1488 0.1864 REMARK 3 3 3.0615 - 2.6746 1.00 2474 149 0.1737 0.2090 REMARK 3 4 2.6746 - 2.4301 1.00 2463 146 0.1773 0.2043 REMARK 3 5 2.4301 - 2.2559 1.00 2448 138 0.1688 0.2140 REMARK 3 6 2.2559 - 2.1229 0.98 2404 149 0.1668 0.2071 REMARK 3 7 2.1229 - 2.0166 0.99 2425 134 0.1677 0.1773 REMARK 3 8 2.0166 - 1.9288 1.00 2417 146 0.1705 0.1933 REMARK 3 9 1.9288 - 1.8546 1.00 2441 130 0.1737 0.1963 REMARK 3 10 1.8546 - 1.7906 1.00 2406 150 0.1843 0.2168 REMARK 3 11 1.7906 - 1.7346 1.00 2394 151 0.1758 0.2367 REMARK 3 12 1.7346 - 1.6850 1.00 2432 136 0.1900 0.2190 REMARK 3 13 1.6850 - 1.6406 1.00 2414 136 0.1821 0.2387 REMARK 3 14 1.6406 - 1.6006 0.98 2376 146 0.1822 0.2270 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2693 REMARK 3 ANGLE : 0.806 3661 REMARK 3 CHIRALITY : 0.055 372 REMARK 3 PLANARITY : 0.007 480 REMARK 3 DIHEDRAL : 13.133 1526 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GLR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-MAY-18. REMARK 100 THE DEPOSITION ID IS D_1200010134. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65337 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 200 DATA REDUNDANCY : 1.990 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.3800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.9 REMARK 200 DATA REDUNDANCY IN SHELL : 1.94 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.140 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALLIZED IN: 23-27% PEG3350, 0.2 M REMARK 280 LISO4, 0.1 M SODIUM ACETATE PH 4.5 SOAKED IN: 27% PEG3350, 0.2 M REMARK 280 LISO4, 0.1 M SODIUM ACETATE PH 4.5, 20% DMSO, 10 MM COMPOUND, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.80350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.92650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.79900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.92650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.80350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 23.79900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -25 REMARK 465 LYS A -24 REMARK 465 HIS A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 PRO A -17 REMARK 465 MET A -16 REMARK 465 SER A -15 REMARK 465 ASP A -14 REMARK 465 TYR A -13 REMARK 465 ASP A -12 REMARK 465 ILE A -11 REMARK 465 PRO A -10 REMARK 465 THR A -9 REMARK 465 THR A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 MET B -25 REMARK 465 LYS B -24 REMARK 465 HIS B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 PRO B -17 REMARK 465 MET B -16 REMARK 465 SER B -15 REMARK 465 ASP B -14 REMARK 465 TYR B -13 REMARK 465 ASP B -12 REMARK 465 ILE B -11 REMARK 465 PRO B -10 REMARK 465 THR B -9 REMARK 465 THR B -8 REMARK 465 GLU B -7 REMARK 465 ASN B -6 REMARK 465 LEU B -5 REMARK 465 TYR B -4 REMARK 465 PHE B -3 REMARK 465 GLN B -2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CE REMARK 470 MET A 22 CE REMARK 470 ARG A 25 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 50 NH1 NH2 REMARK 470 ASP A 62 CB CG OD1 OD2 REMARK 470 ALA A 63 CB REMARK 470 LYS A 66 CD CE NZ REMARK 470 GLN A 92 CD OE1 NE2 REMARK 470 GLU A 100 CG CD OE1 OE2 REMARK 470 MET A 101 CE REMARK 470 ARG A 102 NE CZ NH1 NH2 REMARK 470 LYS A 114 NZ REMARK 470 LYS A 130 CE NZ REMARK 470 LYS A 132 CE NZ REMARK 470 GLN A 142 OE1 REMARK 470 ASP A 154 OD1 OD2 REMARK 470 THR A 155 CB OG1 CG2 REMARK 470 GLY B -1 N CA REMARK 470 GLN B 16 CD OE1 NE2 REMARK 470 LYS B 23 CE NZ REMARK 470 PHE B 27 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 41 CG CD OE1 OE2 REMARK 470 ARG B 50 CZ NH1 NH2 REMARK 470 ASP B 62 CB CG OD1 OD2 REMARK 470 ALA B 63 CB REMARK 470 LYS B 66 CD CE NZ REMARK 470 MET B 81 CE REMARK 470 ASP B 99 CB CG OD1 OD2 REMARK 470 GLU B 100 CG CD OE1 OE2 REMARK 470 MET B 101 CE REMARK 470 ARG B 102 CD NE CZ NH1 NH2 REMARK 470 LYS B 130 CD CE NZ REMARK 470 LYS B 131 CE NZ REMARK 470 LYS B 132 CE NZ REMARK 470 GLN B 142 NE2 REMARK 470 ASP B 154 CG OD1 OD2 REMARK 470 THR B 155 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 399 O HOH B 435 2.15 REMARK 500 NE2 GLN B 92 O HOH B 301 2.16 REMARK 500 O HOH A 388 O HOH A 469 2.17 REMARK 500 O HOH A 369 O HOH A 456 2.19 REMARK 500 OD1 ASP A 89 O HOH A 301 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 333 O HOH B 382 1655 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 63 105.84 101.52 REMARK 500 GLN A 92 22.36 -145.24 REMARK 500 ASP B 89 -66.85 -100.18 REMARK 500 ASP B 89 -65.91 -100.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 F3E B 201 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F3E A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F3E A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F3E B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 206 DBREF 6GLR A 1 156 UNP P36639 8ODP_HUMAN 42 197 DBREF 6GLR B 1 156 UNP P36639 8ODP_HUMAN 42 197 SEQADV 6GLR MET A -25 UNP P36639 INITIATING METHIONINE SEQADV 6GLR LYS A -24 UNP P36639 EXPRESSION TAG SEQADV 6GLR HIS A -23 UNP P36639 EXPRESSION TAG SEQADV 6GLR HIS A -22 UNP P36639 EXPRESSION TAG SEQADV 6GLR HIS A -21 UNP P36639 EXPRESSION TAG SEQADV 6GLR HIS A -20 UNP P36639 EXPRESSION TAG SEQADV 6GLR HIS A -19 UNP P36639 EXPRESSION TAG SEQADV 6GLR HIS A -18 UNP P36639 EXPRESSION TAG SEQADV 6GLR PRO A -17 UNP P36639 EXPRESSION TAG SEQADV 6GLR MET A -16 UNP P36639 EXPRESSION TAG SEQADV 6GLR SER A -15 UNP P36639 EXPRESSION TAG SEQADV 6GLR ASP A -14 UNP P36639 EXPRESSION TAG SEQADV 6GLR TYR A -13 UNP P36639 EXPRESSION TAG SEQADV 6GLR ASP A -12 UNP P36639 EXPRESSION TAG SEQADV 6GLR ILE A -11 UNP P36639 EXPRESSION TAG SEQADV 6GLR PRO A -10 UNP P36639 EXPRESSION TAG SEQADV 6GLR THR A -9 UNP P36639 EXPRESSION TAG SEQADV 6GLR THR A -8 UNP P36639 EXPRESSION TAG SEQADV 6GLR GLU A -7 UNP P36639 EXPRESSION TAG SEQADV 6GLR ASN A -6 UNP P36639 EXPRESSION TAG SEQADV 6GLR LEU A -5 UNP P36639 EXPRESSION TAG SEQADV 6GLR TYR A -4 UNP P36639 EXPRESSION TAG SEQADV 6GLR PHE A -3 UNP P36639 EXPRESSION TAG SEQADV 6GLR GLN A -2 UNP P36639 EXPRESSION TAG SEQADV 6GLR GLY A -1 UNP P36639 EXPRESSION TAG SEQADV 6GLR ALA A 0 UNP P36639 EXPRESSION TAG SEQADV 6GLR GLY A 33 UNP P36639 ASN 74 ENGINEERED MUTATION SEQADV 6GLR MET B -25 UNP P36639 INITIATING METHIONINE SEQADV 6GLR LYS B -24 UNP P36639 EXPRESSION TAG SEQADV 6GLR HIS B -23 UNP P36639 EXPRESSION TAG SEQADV 6GLR HIS B -22 UNP P36639 EXPRESSION TAG SEQADV 6GLR HIS B -21 UNP P36639 EXPRESSION TAG SEQADV 6GLR HIS B -20 UNP P36639 EXPRESSION TAG SEQADV 6GLR HIS B -19 UNP P36639 EXPRESSION TAG SEQADV 6GLR HIS B -18 UNP P36639 EXPRESSION TAG SEQADV 6GLR PRO B -17 UNP P36639 EXPRESSION TAG SEQADV 6GLR MET B -16 UNP P36639 EXPRESSION TAG SEQADV 6GLR SER B -15 UNP P36639 EXPRESSION TAG SEQADV 6GLR ASP B -14 UNP P36639 EXPRESSION TAG SEQADV 6GLR TYR B -13 UNP P36639 EXPRESSION TAG SEQADV 6GLR ASP B -12 UNP P36639 EXPRESSION TAG SEQADV 6GLR ILE B -11 UNP P36639 EXPRESSION TAG SEQADV 6GLR PRO B -10 UNP P36639 EXPRESSION TAG SEQADV 6GLR THR B -9 UNP P36639 EXPRESSION TAG SEQADV 6GLR THR B -8 UNP P36639 EXPRESSION TAG SEQADV 6GLR GLU B -7 UNP P36639 EXPRESSION TAG SEQADV 6GLR ASN B -6 UNP P36639 EXPRESSION TAG SEQADV 6GLR LEU B -5 UNP P36639 EXPRESSION TAG SEQADV 6GLR TYR B -4 UNP P36639 EXPRESSION TAG SEQADV 6GLR PHE B -3 UNP P36639 EXPRESSION TAG SEQADV 6GLR GLN B -2 UNP P36639 EXPRESSION TAG SEQADV 6GLR GLY B -1 UNP P36639 EXPRESSION TAG SEQADV 6GLR ALA B 0 UNP P36639 EXPRESSION TAG SEQADV 6GLR GLY B 33 UNP P36639 ASN 74 ENGINEERED MUTATION SEQRES 1 A 182 MET LYS HIS HIS HIS HIS HIS HIS PRO MET SER ASP TYR SEQRES 2 A 182 ASP ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA SEQRES 3 A 182 MET GLY ALA SER ARG LEU TYR THR LEU VAL LEU VAL LEU SEQRES 4 A 182 GLN PRO GLN ARG VAL LEU LEU GLY MET LYS LYS ARG GLY SEQRES 5 A 182 PHE GLY ALA GLY ARG TRP GLY GLY PHE GLY GLY LYS VAL SEQRES 6 A 182 GLN GLU GLY GLU THR ILE GLU ASP GLY ALA ARG ARG GLU SEQRES 7 A 182 LEU GLN GLU GLU SER GLY LEU THR VAL ASP ALA LEU HIS SEQRES 8 A 182 LYS VAL GLY GLN ILE VAL PHE GLU PHE VAL GLY GLU PRO SEQRES 9 A 182 GLU LEU MET ASP VAL HIS VAL PHE CYS THR ASP SER ILE SEQRES 10 A 182 GLN GLY THR PRO VAL GLU SER ASP GLU MET ARG PRO CYS SEQRES 11 A 182 TRP PHE GLN LEU ASP GLN ILE PRO PHE LYS ASP MET TRP SEQRES 12 A 182 PRO ASP ASP SER TYR TRP PHE PRO LEU LEU LEU GLN LYS SEQRES 13 A 182 LYS LYS PHE HIS GLY TYR PHE LYS PHE GLN GLY GLN ASP SEQRES 14 A 182 THR ILE LEU ASP TYR THR LEU ARG GLU VAL ASP THR VAL SEQRES 1 B 182 MET LYS HIS HIS HIS HIS HIS HIS PRO MET SER ASP TYR SEQRES 2 B 182 ASP ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA SEQRES 3 B 182 MET GLY ALA SER ARG LEU TYR THR LEU VAL LEU VAL LEU SEQRES 4 B 182 GLN PRO GLN ARG VAL LEU LEU GLY MET LYS LYS ARG GLY SEQRES 5 B 182 PHE GLY ALA GLY ARG TRP GLY GLY PHE GLY GLY LYS VAL SEQRES 6 B 182 GLN GLU GLY GLU THR ILE GLU ASP GLY ALA ARG ARG GLU SEQRES 7 B 182 LEU GLN GLU GLU SER GLY LEU THR VAL ASP ALA LEU HIS SEQRES 8 B 182 LYS VAL GLY GLN ILE VAL PHE GLU PHE VAL GLY GLU PRO SEQRES 9 B 182 GLU LEU MET ASP VAL HIS VAL PHE CYS THR ASP SER ILE SEQRES 10 B 182 GLN GLY THR PRO VAL GLU SER ASP GLU MET ARG PRO CYS SEQRES 11 B 182 TRP PHE GLN LEU ASP GLN ILE PRO PHE LYS ASP MET TRP SEQRES 12 B 182 PRO ASP ASP SER TYR TRP PHE PRO LEU LEU LEU GLN LYS SEQRES 13 B 182 LYS LYS PHE HIS GLY TYR PHE LYS PHE GLN GLY GLN ASP SEQRES 14 B 182 THR ILE LEU ASP TYR THR LEU ARG GLU VAL ASP THR VAL HET F3E A 201 13 HET F3E A 202 13 HET ACT A 203 7 HET SO4 A 204 5 HET SO4 A 205 5 HET SO4 A 206 5 HET F3E B 201 9 HET ACT B 202 7 HET ACT B 203 7 HET SO4 B 204 5 HET SO4 B 205 5 HET SO4 B 206 5 HETNAM F3E 4-PHENYLPYRIMIDIN-2-AMINE HETNAM ACT ACETATE ION HETNAM SO4 SULFATE ION FORMUL 3 F3E 3(C10 H9 N3) FORMUL 5 ACT 3(C2 H3 O2 1-) FORMUL 6 SO4 6(O4 S 2-) FORMUL 15 HOH *370(H2 O) HELIX 1 AA1 THR A 44 GLY A 58 1 15 HELIX 2 AA2 PRO A 112 MET A 116 5 5 HELIX 3 AA3 TRP A 117 PRO A 118 5 2 HELIX 4 AA4 ASP A 119 GLN A 129 1 11 HELIX 5 AA5 THR B 44 GLY B 58 1 15 HELIX 6 AA6 PRO B 112 MET B 116 5 5 HELIX 7 AA7 TRP B 117 PRO B 118 5 2 HELIX 8 AA8 ASP B 119 GLN B 129 1 11 SHEET 1 AA1 4 TRP A 32 GLY A 33 0 SHEET 2 AA1 4 ARG A 17 LYS A 23 -1 N GLY A 21 O GLY A 33 SHEET 3 AA1 4 SER A 4 LEU A 13 -1 N VAL A 12 O LEU A 19 SHEET 4 AA1 4 MET A 101 GLN A 107 0 SHEET 1 AA2 7 PHE A 35 LYS A 38 0 SHEET 2 AA2 7 SER A 4 LEU A 13 -1 N VAL A 10 O PHE A 35 SHEET 3 AA2 7 ARG A 17 LYS A 23 -1 O LEU A 19 N VAL A 12 SHEET 4 AA2 7 GLU A 77 THR A 88 0 SHEET 5 AA2 7 HIS A 65 PHE A 74 -1 N ILE A 70 O VAL A 83 SHEET 6 AA2 7 LYS A 132 GLN A 140 1 O PHE A 139 N GLU A 73 SHEET 7 AA2 7 THR A 144 VAL A 153 -1 O THR A 144 N GLN A 140 SHEET 1 AA3 4 TRP B 32 GLY B 33 0 SHEET 2 AA3 4 ARG B 17 LYS B 23 -1 N GLY B 21 O GLY B 33 SHEET 3 AA3 4 SER B 4 LEU B 13 -1 N VAL B 12 O LEU B 19 SHEET 4 AA3 4 MET B 101 GLN B 107 0 SHEET 1 AA4 7 PHE B 35 LYS B 38 0 SHEET 2 AA4 7 SER B 4 LEU B 13 -1 N VAL B 10 O PHE B 35 SHEET 3 AA4 7 ARG B 17 LYS B 23 -1 O LEU B 19 N VAL B 12 SHEET 4 AA4 7 LEU B 80 THR B 88 0 SHEET 5 AA4 7 HIS B 65 PHE B 74 -1 N ILE B 70 O VAL B 83 SHEET 6 AA4 7 PHE B 133 GLN B 140 1 O PHE B 139 N GLU B 73 SHEET 7 AA4 7 THR B 144 GLU B 152 -1 O ASP B 147 N LYS B 138 SSBOND 1 CYS A 104 CYS B 104 1555 1445 2.03 SITE 1 AC1 7 PHE A 72 MET A 81 TRP A 117 ASP A 119 SITE 2 AC1 7 ASP A 120 ACT A 203 HOH A 331 SITE 1 AC2 8 TYR A 7 PHE A 27 GLU A 77 GLU A 79 SITE 2 AC2 8 MET A 81 SO4 A 206 PRO B 15 ASP B 89 SITE 1 AC3 8 LEU A 9 GLY A 33 GLY A 34 ASP A 120 SITE 2 AC3 8 TRP A 123 F3E A 201 HOH A 328 HOH A 331 SITE 1 AC4 3 HIS A 65 LYS A 66 HOH A 306 SITE 1 AC5 5 ARG A 151 HOH A 307 HOH A 332 THR B 44 SITE 2 AC5 5 ILE B 45 SITE 1 AC6 8 PHE A 27 F3E A 202 HOH A 402 HOH A 407 SITE 2 AC6 8 HIS B 65 THR B 88 ASP B 89 SER B 90 SITE 1 AC7 6 PHE B 72 TRP B 117 ASP B 119 ASP B 120 SITE 2 AC7 6 ACT B 202 HOH B 324 SITE 1 AC8 7 LEU B 9 GLY B 33 GLY B 34 ASP B 120 SITE 2 AC8 7 PHE B 124 F3E B 201 HOH B 324 SITE 1 AC9 7 GLN A 107 ASP A 109 HOH A 340 HOH A 383 SITE 2 AC9 7 ARG B 5 HOH B 330 HOH B 357 SITE 1 AD1 7 THR A 44 ILE A 45 HIS B 134 ARG B 151 SITE 2 AD1 7 HOH B 320 HOH B 322 HOH B 358 SITE 1 AD2 2 HIS B 65 LYS B 66 SITE 1 AD3 4 ARG B 151 VAL B 153 ASP B 154 THR B 155 CRYST1 45.607 47.598 123.853 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021926 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021009 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008074 0.00000