HEADER DNA BINDING PROTEIN 01-JUN-18 6GO5 TITLE TDT CHIMERA (LOOP1 OF POL MU) - TERNARY COMPLEX WITH 1-NT GAPPED DNA TITLE 2 SUBSTRATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA NUCLEOTIDYLEXOTRANSFERASE,DNA-DIRECTED DNA/RNA COMPND 3 POLYMERASE MU,DNA NUCLEOTIDYLEXOTRANSFERASE; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: TERMINAL ADDITION ENZYME,TERMINAL COMPND 6 DEOXYNUCLEOTIDYLTRANSFERASE,TERMINAL TRANSFERASE,POL MU,TERMINAL COMPND 7 TRANSFERASE,TERMINAL ADDITION ENZYME,TERMINAL COMPND 8 DEOXYNUCLEOTIDYLTRANSFERASE,TERMINAL TRANSFERASE; COMPND 9 EC: 2.7.7.31,2.7.7.7,2.7.7.31; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: THERE IS AN INSERTION OF ONE RESIDUE BETWEEN LOOP1 OF COMPND 12 POL MU AND TDT (Q394). THIS INSERTION EXPLAIN THE NUMBERING SHIFT COMPND 13 WITH WT-TDT.,THERE IS AN INSERTION OF ONE RESIDUE BETWEEN LOOP1 OF COMPND 14 POL MU AND TDT (Q394). THIS INSERTION EXPLAIN THE NUMBERING SHIFT COMPND 15 WITH WT-TDT.,THERE IS AN INSERTION OF ONE RESIDUE BETWEEN LOOP1 OF COMPND 16 POL MU AND TDT (Q394). THIS INSERTION EXPLAIN THE NUMBERING SHIFT COMPND 17 WITH WT-TDT.; COMPND 18 MOL_ID: 2; COMPND 19 MOLECULE: DNA (5'-D(*CP*GP*CP*TP*GP*GP*CP*AP*AP*AP*CP*A)-3'); COMPND 20 CHAIN: H, N; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 3; COMPND 23 MOLECULE: DNA (5'-D(*TP*GP*TP*TP*TP*G)-3'); COMPND 24 CHAIN: F, L; COMPND 25 ENGINEERED: YES; COMPND 26 MOL_ID: 4; COMPND 27 MOLECULE: DNA (5'-D(*AP*CP*AP*GP*CP*G)-3'); COMPND 28 CHAIN: G, M; COMPND 29 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: DNTT, TDT, POLM, POLMU; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 15 ORGANISM_TAXID: 32630; SOURCE 16 MOL_ID: 4; SOURCE 17 SYNTHETIC: YES; SOURCE 18 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 19 ORGANISM_TAXID: 32630 KEYWDS NHEJ PATHWAY, DNA BRIDGING, DNA POLYMERASE POLX, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.LOC'H,C.A.GERODIMOS,S.ROSARIO,M.R.LIEBER,M.DELARUE REVDAT 3 25-DEC-19 6GO5 1 JRNL REVDAT 2 14-AUG-19 6GO5 1 REMARK REVDAT 1 05-JUN-19 6GO5 0 JRNL AUTH J.LOC'H,C.A.GERODIMOS,S.ROSARIO,M.TEKPINAR,M.R.LIEBER, JRNL AUTH 2 M.DELARUE JRNL TITL STRUCTURAL EVIDENCE FOR AN INTRANSBASE SELECTION MECHANISM JRNL TITL 2 INVOLVING LOOP1 IN POLYMERASE MU AT AN NHEJ DOUBLE-STRAND JRNL TITL 3 BREAK JUNCTION. JRNL REF J.BIOL.CHEM. V. 294 10579 2019 JRNL REFN ESSN 1083-351X JRNL PMID 31138645 JRNL DOI 10.1074/JBC.RA119.008739 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.86 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 39208 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1961 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.41 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.75 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2868 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2414 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2724 REMARK 3 BIN R VALUE (WORKING SET) : 0.2369 REMARK 3 BIN FREE R VALUE : 0.3257 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.02 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 144 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5216 REMARK 3 NUCLEIC ACID ATOMS : 936 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 327 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 82.33 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.16910 REMARK 3 B22 (A**2) : -0.71540 REMARK 3 B33 (A**2) : -1.45370 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -4.99360 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.370 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.376 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.255 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.363 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.254 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6429 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 8890 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2064 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 113 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 864 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6429 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 833 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6983 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.05 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.62 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.35 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 259.3763 -6.9147 85.5462 REMARK 3 T TENSOR REMARK 3 T11: -0.1712 T22: -0.1397 REMARK 3 T33: -0.1287 T12: 0.0203 REMARK 3 T13: 0.0908 T23: 0.1313 REMARK 3 L TENSOR REMARK 3 L11: 3.0632 L22: 1.3351 REMARK 3 L33: 1.2946 L12: -0.8374 REMARK 3 L13: -0.3479 L23: 0.3022 REMARK 3 S TENSOR REMARK 3 S11: -0.1942 S12: -0.5745 S13: -0.3030 REMARK 3 S21: 0.1392 S22: -0.0313 S23: 0.0844 REMARK 3 S31: -0.0015 S32: 0.3073 S33: 0.2255 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 261.5180 -39.9904 60.2082 REMARK 3 T TENSOR REMARK 3 T11: -0.0749 T22: -0.1593 REMARK 3 T33: -0.0899 T12: 0.0218 REMARK 3 T13: 0.1031 T23: 0.0281 REMARK 3 L TENSOR REMARK 3 L11: 1.1074 L22: 1.6428 REMARK 3 L33: 1.0849 L12: -0.0506 REMARK 3 L13: 0.1738 L23: 0.0709 REMARK 3 S TENSOR REMARK 3 S11: 0.0166 S12: 0.0815 S13: 0.1308 REMARK 3 S21: 0.1396 S22: -0.1533 S23: 0.0465 REMARK 3 S31: -0.0306 S32: 0.0835 S33: 0.1367 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): 262.9021 -54.9104 64.3581 REMARK 3 T TENSOR REMARK 3 T11: 0.2727 T22: -0.2935 REMARK 3 T33: 0.1395 T12: 0.0770 REMARK 3 T13: 0.1652 T23: 0.1382 REMARK 3 L TENSOR REMARK 3 L11: 0.5988 L22: 0.6008 REMARK 3 L33: 5.1819 L12: -1.5017 REMARK 3 L13: -3.3257 L23: -1.6741 REMARK 3 S TENSOR REMARK 3 S11: 0.0553 S12: -0.2596 S13: -0.0860 REMARK 3 S21: 0.0891 S22: -0.0187 S23: 0.0296 REMARK 3 S31: 0.2995 S32: 0.1142 S33: -0.0367 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { E|* } REMARK 3 ORIGIN FOR THE GROUP (A): 252.3195 -53.4932 59.3503 REMARK 3 T TENSOR REMARK 3 T11: 0.0792 T22: -0.2998 REMARK 3 T33: 0.0255 T12: 0.0766 REMARK 3 T13: 0.1098 T23: -0.0962 REMARK 3 L TENSOR REMARK 3 L11: 6.2429 L22: 7.8406 REMARK 3 L33: 5.3913 L12: 1.1952 REMARK 3 L13: 0.9833 L23: -2.7782 REMARK 3 S TENSOR REMARK 3 S11: 0.0001 S12: 0.0320 S13: -0.3227 REMARK 3 S21: -0.4953 S22: -0.3236 S23: 0.4062 REMARK 3 S31: 0.5125 S32: -0.5007 S33: 0.3235 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { F|* } REMARK 3 ORIGIN FOR THE GROUP (A): 236.5725 -44.9113 61.6476 REMARK 3 T TENSOR REMARK 3 T11: -0.3082 T22: -0.0067 REMARK 3 T33: 0.2845 T12: -0.1057 REMARK 3 T13: 0.0997 T23: -0.0776 REMARK 3 L TENSOR REMARK 3 L11: 2.9811 L22: 6.5269 REMARK 3 L33: -0.2482 L12: -0.2418 REMARK 3 L13: -1.2282 L23: 0.5222 REMARK 3 S TENSOR REMARK 3 S11: 0.0206 S12: 0.1918 S13: -0.0454 REMARK 3 S21: -0.0298 S22: 0.0866 S23: 0.1593 REMARK 3 S31: -0.1644 S32: -0.1478 S33: -0.1073 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { G|* } REMARK 3 ORIGIN FOR THE GROUP (A): 259.8989 -22.2260 87.8399 REMARK 3 T TENSOR REMARK 3 T11: 0.2704 T22: -0.2905 REMARK 3 T33: 0.2675 T12: 0.1188 REMARK 3 T13: 0.1548 T23: 0.1634 REMARK 3 L TENSOR REMARK 3 L11: 0.7769 L22: 0.5835 REMARK 3 L33: 4.7694 L12: 2.7678 REMARK 3 L13: -3.1471 L23: -0.0293 REMARK 3 S TENSOR REMARK 3 S11: 0.0477 S12: -0.2100 S13: -0.3723 REMARK 3 S21: -0.1112 S22: -0.0272 S23: 0.1483 REMARK 3 S31: 0.2434 S32: 0.3251 S33: -0.0206 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: { H|* } REMARK 3 ORIGIN FOR THE GROUP (A): 249.1634 -19.7059 85.3109 REMARK 3 T TENSOR REMARK 3 T11: -0.2122 T22: -0.2990 REMARK 3 T33: 0.3135 T12: -0.0289 REMARK 3 T13: 0.1059 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 8.2541 L22: 7.9723 REMARK 3 L33: 5.9885 L12: -1.5709 REMARK 3 L13: -1.1957 L23: -0.7944 REMARK 3 S TENSOR REMARK 3 S11: -0.0419 S12: -0.1777 S13: -0.1363 REMARK 3 S21: -0.4799 S22: -0.1926 S23: 0.1030 REMARK 3 S31: 0.5012 S32: -0.5386 S33: 0.2344 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: { I|* } REMARK 3 ORIGIN FOR THE GROUP (A): 234.2306 -10.6402 90.8669 REMARK 3 T TENSOR REMARK 3 T11: -0.3121 T22: 0.3017 REMARK 3 T33: 0.3131 T12: -0.0568 REMARK 3 T13: 0.0687 T23: 0.1448 REMARK 3 L TENSOR REMARK 3 L11: 2.2165 L22: 7.8845 REMARK 3 L33: 0.1888 L12: 1.4418 REMARK 3 L13: -1.5236 L23: 0.5410 REMARK 3 S TENSOR REMARK 3 S11: 0.0072 S12: 0.1386 S13: -0.0981 REMARK 3 S21: -0.0296 S22: 0.0256 S23: 0.1288 REMARK 3 S31: -0.2043 S32: -0.1224 S33: -0.0328 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GO5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1200010307. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39224 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 44.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.5400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.81300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 19-25% PEG 4000, 100-400 MM LITHIUM REMARK 280 SULFATE, 100 MM TRIS, PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 117.09000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.62500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 117.09000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.62500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, L, N, M REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 111 REMARK 465 GLY A 112 REMARK 465 SER A 113 REMARK 465 SER A 114 REMARK 465 HIS A 115 REMARK 465 HIS A 116 REMARK 465 HIS A 117 REMARK 465 HIS A 118 REMARK 465 HIS A 119 REMARK 465 HIS A 120 REMARK 465 SER A 121 REMARK 465 SER A 122 REMARK 465 GLY A 123 REMARK 465 LEU A 124 REMARK 465 VAL A 125 REMARK 465 PRO A 126 REMARK 465 ARG A 127 REMARK 465 GLY A 128 REMARK 465 SER A 129 REMARK 465 HIS A 130 REMARK 465 MET A 131 REMARK 465 SER A 132 REMARK 465 PRO A 133 REMARK 465 SER A 134 REMARK 465 PRO A 135 REMARK 465 VAL A 136 REMARK 465 PRO A 137 REMARK 465 GLY A 138 REMARK 465 SER A 139 REMARK 465 GLN A 140 REMARK 465 ASN A 141 REMARK 465 VAL A 142 REMARK 465 PRO A 143 REMARK 465 ALA A 144 REMARK 465 PRO A 145 REMARK 465 ALA A 146 REMARK 465 VAL A 147 REMARK 465 LYS A 148 REMARK 465 THR A 354 REMARK 465 GLU A 355 REMARK 465 ASP A 356 REMARK 465 LEU A 385 REMARK 465 ALA A 386 REMARK 465 ASP A 387 REMARK 465 SER A 388 REMARK 465 ALA A 389 REMARK 465 HIS A 390 REMARK 465 ASN A 391 REMARK 465 LEU A 392 REMARK 465 ARG A 393 REMARK 465 GLN A 394 REMARK 465 ARG A 395 REMARK 465 SER A 418 REMARK 465 GLU A 419 REMARK 465 LYS A 420 REMARK 465 SER A 421 REMARK 465 GLY A 422 REMARK 465 GLN A 423 REMARK 465 MET B 111 REMARK 465 GLY B 112 REMARK 465 SER B 113 REMARK 465 SER B 114 REMARK 465 HIS B 115 REMARK 465 HIS B 116 REMARK 465 HIS B 117 REMARK 465 HIS B 118 REMARK 465 HIS B 119 REMARK 465 HIS B 120 REMARK 465 SER B 121 REMARK 465 SER B 122 REMARK 465 GLY B 123 REMARK 465 LEU B 124 REMARK 465 VAL B 125 REMARK 465 PRO B 126 REMARK 465 ARG B 127 REMARK 465 GLY B 128 REMARK 465 SER B 129 REMARK 465 HIS B 130 REMARK 465 MET B 131 REMARK 465 SER B 132 REMARK 465 PRO B 133 REMARK 465 SER B 134 REMARK 465 PRO B 135 REMARK 465 VAL B 136 REMARK 465 PRO B 137 REMARK 465 GLY B 138 REMARK 465 SER B 139 REMARK 465 GLN B 140 REMARK 465 ASN B 141 REMARK 465 VAL B 142 REMARK 465 PRO B 143 REMARK 465 ALA B 144 REMARK 465 PRO B 145 REMARK 465 ALA B 146 REMARK 465 VAL B 147 REMARK 465 LYS B 148 REMARK 465 GLU B 352 REMARK 465 ALA B 353 REMARK 465 HIS B 384 REMARK 465 LEU B 385 REMARK 465 ALA B 386 REMARK 465 ASP B 387 REMARK 465 SER B 388 REMARK 465 ALA B 389 REMARK 465 HIS B 390 REMARK 465 ASN B 391 REMARK 465 LEU B 392 REMARK 465 ARG B 393 REMARK 465 GLN B 394 REMARK 465 ARG B 395 REMARK 465 SER B 396 REMARK 465 SER B 397 REMARK 465 THR B 398 REMARK 465 MET B 399 REMARK 465 ASP B 400 REMARK 465 VAL B 401 REMARK 465 SER B 418 REMARK 465 GLU B 419 REMARK 465 LYS B 420 REMARK 465 SER B 421 REMARK 465 GLY B 422 REMARK 465 GLN B 423 REMARK 465 GLN B 424 REMARK 465 GLU B 425 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 149 CD CE NZ REMARK 470 LEU A 167 CG CD1 CD2 REMARK 470 LEU A 175 O REMARK 470 ARG A 182 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 183 CG CD OE1 OE2 REMARK 470 GLU A 185 CD OE1 OE2 REMARK 470 LYS A 209 CG CD CE NZ REMARK 470 GLU A 212 CG CD OE1 OE2 REMARK 470 LYS A 220 CD CE NZ REMARK 470 GLU A 230 CG CD OE1 OE2 REMARK 470 GLU A 233 CG CD OE1 OE2 REMARK 470 SER A 235 OG REMARK 470 LYS A 238 CG CD CE NZ REMARK 470 GLU A 244 CG CD OE1 OE2 REMARK 470 ARG A 245 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 247 CG CD CE NZ REMARK 470 LYS A 250 CD CE NZ REMARK 470 GLU A 264 CG CD OE1 OE2 REMARK 470 LYS A 265 CD CE NZ REMARK 470 ARG A 272 CG CD NE CZ NH1 NH2 REMARK 470 THR A 273 OG1 CG2 REMARK 470 LEU A 274 CG CD1 CD2 REMARK 470 SER A 275 OG REMARK 470 LYS A 276 CG CD CE NZ REMARK 470 LYS A 281 CB CG CD CE NZ REMARK 470 SER A 282 OG REMARK 470 ARG A 284 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 297 CD OE1 OE2 REMARK 470 VAL A 319 CG1 CG2 REMARK 470 VAL A 320 CB CG1 CG2 REMARK 470 GLU A 357 CB CG CD OE1 OE2 REMARK 470 GLU A 358 CG CD OE1 OE2 REMARK 470 GLN A 359 CG CD OE1 NE2 REMARK 470 GLN A 360 CB CG CD OE1 NE2 REMARK 470 ARG A 382 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 384 CG ND1 CD2 CE1 NE2 REMARK 470 MET A 399 CG SD CE REMARK 470 ASP A 412 CB CG OD1 OD2 REMARK 470 GLN A 424 CG CD OE1 NE2 REMARK 470 GLU A 425 CG CD OE1 OE2 REMARK 470 LYS A 427 CG CD CE NZ REMARK 470 ARG A 444 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 483 CG CD CE NZ REMARK 470 GLU A 490 CB CG CD OE1 OE2 REMARK 470 LYS B 149 CD CE NZ REMARK 470 ARG B 158 CZ NH1 NH2 REMARK 470 LEU B 167 CG CD1 CD2 REMARK 470 GLU B 183 CG CD OE1 OE2 REMARK 470 GLU B 185 CD OE1 OE2 REMARK 470 LYS B 209 CG CD CE NZ REMARK 470 LYS B 220 NZ REMARK 470 LYS B 222 NZ REMARK 470 GLU B 230 CG CD OE1 OE2 REMARK 470 LYS B 238 CG CD CE NZ REMARK 470 LYS B 247 CE NZ REMARK 470 LYS B 250 CD CE NZ REMARK 470 LYS B 265 CE NZ REMARK 470 LYS B 276 CG CD CE NZ REMARK 470 LYS B 281 CB CG CD CE NZ REMARK 470 ARG B 284 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 297 CG CD OE1 OE2 REMARK 470 ARG B 305 NE CZ NH1 NH2 REMARK 470 GLU B 309 CG CD OE1 OE2 REMARK 470 MET B 313 CG SD CE REMARK 470 GLU B 317 CG CD OE1 OE2 REMARK 470 VAL B 320 CB CG1 CG2 REMARK 470 ASP B 325 CG OD1 OD2 REMARK 470 SER B 350 OG REMARK 470 GLU B 355 CG CD OE1 OE2 REMARK 470 ASP B 356 CG OD1 OD2 REMARK 470 GLU B 357 CB CG CD OE1 OE2 REMARK 470 GLU B 358 CG CD OE1 OE2 REMARK 470 GLN B 359 CG CD OE1 NE2 REMARK 470 GLN B 360 CB CG CD OE1 NE2 REMARK 470 LEU B 361 CB CG CD1 CD2 REMARK 470 HIS B 363 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 370 CE NZ REMARK 470 HIS B 417 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 470 CD CE NZ REMARK 470 THR B 482 OG1 CG2 REMARK 470 GLU B 488 CG CD OE1 OE2 REMARK 470 GLU B 490 CB CG CD OE1 OE2 REMARK 470 DA G 1 O5' C5' C4' O4' C3' C2' C1' REMARK 470 DA G 1 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA G 1 C2 N3 C4 REMARK 470 DA M 1 O5' C5' C4' O4' C3' C2' C1' REMARK 470 DA M 1 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA M 1 C2 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG H 5 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC H 7 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DG F 6 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT L 1 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC N 7 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DA N 12 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 331 -158.69 -113.55 REMARK 500 GLN A 360 23.10 -149.26 REMARK 500 SER A 383 155.48 171.27 REMARK 500 THR A 398 -166.90 69.51 REMARK 500 ASN A 475 0.84 -69.06 REMARK 500 ASN A 510 37.60 -82.62 REMARK 500 ASN B 184 78.61 -111.97 REMARK 500 THR B 331 -164.17 -124.37 REMARK 500 ARG B 382 -169.41 -165.49 REMARK 500 ASN B 510 44.87 -87.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 829 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A 830 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH A 831 DISTANCE = 6.56 ANGSTROMS REMARK 525 HOH A 832 DISTANCE = 6.88 ANGSTROMS REMARK 525 HOH A 833 DISTANCE = 7.14 ANGSTROMS REMARK 525 HOH A 834 DISTANCE = 7.20 ANGSTROMS REMARK 525 HOH A 835 DISTANCE = 7.29 ANGSTROMS REMARK 525 HOH A 836 DISTANCE = 8.63 ANGSTROMS REMARK 525 HOH A 837 DISTANCE = 8.97 ANGSTROMS REMARK 525 HOH B 827 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH B 828 DISTANCE = 7.23 ANGSTROMS REMARK 525 HOH B 829 DISTANCE = 9.26 ANGSTROMS REMARK 525 HOH B 830 DISTANCE = 10.13 ANGSTROMS REMARK 525 HOH B 831 DISTANCE = 11.12 ANGSTROMS REMARK 525 HOH F 103 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH L 107 DISTANCE = 5.91 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 601 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 253 O REMARK 620 2 VAL A 255 O 85.2 REMARK 620 3 VAL A 258 O 99.7 90.9 REMARK 620 4 DT F 5 OP1 174.9 96.3 85.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 343 OD1 REMARK 620 2 ASP A 345 OD2 96.4 REMARK 620 3 XC5 A 603 O2A 78.5 80.1 REMARK 620 4 XC5 A 603 O3B 142.9 115.8 88.8 REMARK 620 5 XC5 A 603 O3G 80.5 176.8 98.8 67.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 602 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 253 O REMARK 620 2 VAL B 255 O 86.2 REMARK 620 3 VAL B 258 O 101.0 90.1 REMARK 620 4 DT L 5 OP1 176.1 96.5 76.3 REMARK 620 5 HOH B 782 O 88.9 97.0 168.2 93.5 REMARK 620 6 HOH L 102 O 86.9 160.4 73.3 89.7 101.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 343 OD1 REMARK 620 2 ASP B 345 OD2 100.1 REMARK 620 3 XC5 B 603 O2A 78.6 94.5 REMARK 620 4 XC5 B 603 O1B 158.6 98.6 89.7 REMARK 620 5 HOH B 756 O 94.0 95.5 168.5 94.5 REMARK 620 6 XC5 B 603 O3G 79.0 173.8 91.4 83.5 78.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue XC5 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue XC5 B 603 DBREF 6GO5 A 132 377 UNP P09838 TDT_MOUSE 132 377 DBREF 6GO5 A 378 407 UNP Q9JIW4 DPOLM_MOUSE 363 392 DBREF 6GO5 A 408 511 UNP P09838 TDT_MOUSE 407 510 DBREF 6GO5 B 132 377 UNP P09838 TDT_MOUSE 132 377 DBREF 6GO5 B 378 407 UNP Q9JIW4 DPOLM_MOUSE 363 392 DBREF 6GO5 B 408 511 UNP P09838 TDT_MOUSE 407 510 DBREF 6GO5 H 1 12 PDB 6GO5 6GO5 1 12 DBREF 6GO5 F 1 6 PDB 6GO5 6GO5 1 6 DBREF 6GO5 G 1 6 PDB 6GO5 6GO5 1 6 DBREF 6GO5 L 1 6 PDB 6GO5 6GO5 1 6 DBREF 6GO5 N 1 12 PDB 6GO5 6GO5 1 12 DBREF 6GO5 M 1 6 PDB 6GO5 6GO5 1 6 SEQADV 6GO5 MET A 111 UNP P09838 INITIATING METHIONINE SEQADV 6GO5 GLY A 112 UNP P09838 EXPRESSION TAG SEQADV 6GO5 SER A 113 UNP P09838 EXPRESSION TAG SEQADV 6GO5 SER A 114 UNP P09838 EXPRESSION TAG SEQADV 6GO5 HIS A 115 UNP P09838 EXPRESSION TAG SEQADV 6GO5 HIS A 116 UNP P09838 EXPRESSION TAG SEQADV 6GO5 HIS A 117 UNP P09838 EXPRESSION TAG SEQADV 6GO5 HIS A 118 UNP P09838 EXPRESSION TAG SEQADV 6GO5 HIS A 119 UNP P09838 EXPRESSION TAG SEQADV 6GO5 HIS A 120 UNP P09838 EXPRESSION TAG SEQADV 6GO5 SER A 121 UNP P09838 EXPRESSION TAG SEQADV 6GO5 SER A 122 UNP P09838 EXPRESSION TAG SEQADV 6GO5 GLY A 123 UNP P09838 EXPRESSION TAG SEQADV 6GO5 LEU A 124 UNP P09838 EXPRESSION TAG SEQADV 6GO5 VAL A 125 UNP P09838 EXPRESSION TAG SEQADV 6GO5 PRO A 126 UNP P09838 EXPRESSION TAG SEQADV 6GO5 ARG A 127 UNP P09838 EXPRESSION TAG SEQADV 6GO5 GLY A 128 UNP P09838 EXPRESSION TAG SEQADV 6GO5 SER A 129 UNP P09838 EXPRESSION TAG SEQADV 6GO5 HIS A 130 UNP P09838 EXPRESSION TAG SEQADV 6GO5 MET A 131 UNP P09838 EXPRESSION TAG SEQADV 6GO5 VAL A 401 UNP Q9JIW4 ALA 386 CONFLICT SEQADV 6GO5 MET B 111 UNP P09838 INITIATING METHIONINE SEQADV 6GO5 GLY B 112 UNP P09838 EXPRESSION TAG SEQADV 6GO5 SER B 113 UNP P09838 EXPRESSION TAG SEQADV 6GO5 SER B 114 UNP P09838 EXPRESSION TAG SEQADV 6GO5 HIS B 115 UNP P09838 EXPRESSION TAG SEQADV 6GO5 HIS B 116 UNP P09838 EXPRESSION TAG SEQADV 6GO5 HIS B 117 UNP P09838 EXPRESSION TAG SEQADV 6GO5 HIS B 118 UNP P09838 EXPRESSION TAG SEQADV 6GO5 HIS B 119 UNP P09838 EXPRESSION TAG SEQADV 6GO5 HIS B 120 UNP P09838 EXPRESSION TAG SEQADV 6GO5 SER B 121 UNP P09838 EXPRESSION TAG SEQADV 6GO5 SER B 122 UNP P09838 EXPRESSION TAG SEQADV 6GO5 GLY B 123 UNP P09838 EXPRESSION TAG SEQADV 6GO5 LEU B 124 UNP P09838 EXPRESSION TAG SEQADV 6GO5 VAL B 125 UNP P09838 EXPRESSION TAG SEQADV 6GO5 PRO B 126 UNP P09838 EXPRESSION TAG SEQADV 6GO5 ARG B 127 UNP P09838 EXPRESSION TAG SEQADV 6GO5 GLY B 128 UNP P09838 EXPRESSION TAG SEQADV 6GO5 SER B 129 UNP P09838 EXPRESSION TAG SEQADV 6GO5 HIS B 130 UNP P09838 EXPRESSION TAG SEQADV 6GO5 MET B 131 UNP P09838 EXPRESSION TAG SEQADV 6GO5 VAL B 401 UNP Q9JIW4 ALA 386 CONFLICT SEQRES 1 A 401 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 401 LEU VAL PRO ARG GLY SER HIS MET SER PRO SER PRO VAL SEQRES 3 A 401 PRO GLY SER GLN ASN VAL PRO ALA PRO ALA VAL LYS LYS SEQRES 4 A 401 ILE SER GLN TYR ALA CYS GLN ARG ARG THR THR LEU ASN SEQRES 5 A 401 ASN TYR ASN GLN LEU PHE THR ASP ALA LEU ASP ILE LEU SEQRES 6 A 401 ALA GLU ASN ASP GLU LEU ARG GLU ASN GLU GLY SER CYS SEQRES 7 A 401 LEU ALA PHE MET ARG ALA SER SER VAL LEU LYS SER LEU SEQRES 8 A 401 PRO PHE PRO ILE THR SER MET LYS ASP THR GLU GLY ILE SEQRES 9 A 401 PRO CYS LEU GLY ASP LYS VAL LYS SER ILE ILE GLU GLY SEQRES 10 A 401 ILE ILE GLU ASP GLY GLU SER SER GLU ALA LYS ALA VAL SEQRES 11 A 401 LEU ASN ASP GLU ARG TYR LYS SER PHE LYS LEU PHE THR SEQRES 12 A 401 SER VAL PHE GLY VAL GLY LEU LYS THR ALA GLU LYS TRP SEQRES 13 A 401 PHE ARG MET GLY PHE ARG THR LEU SER LYS ILE GLN SER SEQRES 14 A 401 ASP LYS SER LEU ARG PHE THR GLN MET GLN LYS ALA GLY SEQRES 15 A 401 PHE LEU TYR TYR GLU ASP LEU VAL SER CYS VAL ASN ARG SEQRES 16 A 401 PRO GLU ALA GLU ALA VAL SER MET LEU VAL LYS GLU ALA SEQRES 17 A 401 VAL VAL THR PHE LEU PRO ASP ALA LEU VAL THR MET THR SEQRES 18 A 401 GLY GLY PHE ARG ARG GLY LYS MET THR GLY HIS ASP VAL SEQRES 19 A 401 ASP PHE LEU ILE THR SER PRO GLU ALA THR GLU ASP GLU SEQRES 20 A 401 GLU GLN GLN LEU LEU HIS LYS VAL THR ASP PHE TRP LYS SEQRES 21 A 401 GLN GLN GLY LEU LEU LEU TYR HIS GLN TYR HIS ARG SER SEQRES 22 A 401 HIS LEU ALA ASP SER ALA HIS ASN LEU ARG GLN ARG SER SEQRES 23 A 401 SER THR MET ASP VAL PHE GLU ARG SER PHE CYS ILE LEU SEQRES 24 A 401 LYS LEU ASP HIS GLY ARG VAL HIS SER GLU LYS SER GLY SEQRES 25 A 401 GLN GLN GLU GLY LYS GLY TRP LYS ALA ILE ARG VAL ASP SEQRES 26 A 401 LEU VAL MET CYS PRO TYR ASP ARG ARG ALA PHE ALA LEU SEQRES 27 A 401 LEU GLY TRP THR GLY SER ARG GLN PHE GLU ARG ASP LEU SEQRES 28 A 401 ARG ARG TYR ALA THR HIS GLU ARG LYS MET MET LEU ASP SEQRES 29 A 401 ASN HIS ALA LEU TYR ASP ARG THR LYS ARG VAL PHE LEU SEQRES 30 A 401 GLU ALA GLU SER GLU GLU GLU ILE PHE ALA HIS LEU GLY SEQRES 31 A 401 LEU ASP TYR ILE GLU PRO TRP GLU ARG ASN ALA SEQRES 1 B 401 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 401 LEU VAL PRO ARG GLY SER HIS MET SER PRO SER PRO VAL SEQRES 3 B 401 PRO GLY SER GLN ASN VAL PRO ALA PRO ALA VAL LYS LYS SEQRES 4 B 401 ILE SER GLN TYR ALA CYS GLN ARG ARG THR THR LEU ASN SEQRES 5 B 401 ASN TYR ASN GLN LEU PHE THR ASP ALA LEU ASP ILE LEU SEQRES 6 B 401 ALA GLU ASN ASP GLU LEU ARG GLU ASN GLU GLY SER CYS SEQRES 7 B 401 LEU ALA PHE MET ARG ALA SER SER VAL LEU LYS SER LEU SEQRES 8 B 401 PRO PHE PRO ILE THR SER MET LYS ASP THR GLU GLY ILE SEQRES 9 B 401 PRO CYS LEU GLY ASP LYS VAL LYS SER ILE ILE GLU GLY SEQRES 10 B 401 ILE ILE GLU ASP GLY GLU SER SER GLU ALA LYS ALA VAL SEQRES 11 B 401 LEU ASN ASP GLU ARG TYR LYS SER PHE LYS LEU PHE THR SEQRES 12 B 401 SER VAL PHE GLY VAL GLY LEU LYS THR ALA GLU LYS TRP SEQRES 13 B 401 PHE ARG MET GLY PHE ARG THR LEU SER LYS ILE GLN SER SEQRES 14 B 401 ASP LYS SER LEU ARG PHE THR GLN MET GLN LYS ALA GLY SEQRES 15 B 401 PHE LEU TYR TYR GLU ASP LEU VAL SER CYS VAL ASN ARG SEQRES 16 B 401 PRO GLU ALA GLU ALA VAL SER MET LEU VAL LYS GLU ALA SEQRES 17 B 401 VAL VAL THR PHE LEU PRO ASP ALA LEU VAL THR MET THR SEQRES 18 B 401 GLY GLY PHE ARG ARG GLY LYS MET THR GLY HIS ASP VAL SEQRES 19 B 401 ASP PHE LEU ILE THR SER PRO GLU ALA THR GLU ASP GLU SEQRES 20 B 401 GLU GLN GLN LEU LEU HIS LYS VAL THR ASP PHE TRP LYS SEQRES 21 B 401 GLN GLN GLY LEU LEU LEU TYR HIS GLN TYR HIS ARG SER SEQRES 22 B 401 HIS LEU ALA ASP SER ALA HIS ASN LEU ARG GLN ARG SER SEQRES 23 B 401 SER THR MET ASP VAL PHE GLU ARG SER PHE CYS ILE LEU SEQRES 24 B 401 LYS LEU ASP HIS GLY ARG VAL HIS SER GLU LYS SER GLY SEQRES 25 B 401 GLN GLN GLU GLY LYS GLY TRP LYS ALA ILE ARG VAL ASP SEQRES 26 B 401 LEU VAL MET CYS PRO TYR ASP ARG ARG ALA PHE ALA LEU SEQRES 27 B 401 LEU GLY TRP THR GLY SER ARG GLN PHE GLU ARG ASP LEU SEQRES 28 B 401 ARG ARG TYR ALA THR HIS GLU ARG LYS MET MET LEU ASP SEQRES 29 B 401 ASN HIS ALA LEU TYR ASP ARG THR LYS ARG VAL PHE LEU SEQRES 30 B 401 GLU ALA GLU SER GLU GLU GLU ILE PHE ALA HIS LEU GLY SEQRES 31 B 401 LEU ASP TYR ILE GLU PRO TRP GLU ARG ASN ALA SEQRES 1 H 12 DC DG DC DT DG DG DC DA DA DA DC DA SEQRES 1 F 6 DT DG DT DT DT DG SEQRES 1 G 6 DA DC DA DG DC DG SEQRES 1 L 6 DT DG DT DT DT DG SEQRES 1 N 12 DC DG DC DT DG DG DC DA DA DA DC DA SEQRES 1 M 6 DA DC DA DG DC DG HET NA A 601 1 HET MG A 602 1 HET XC5 A 603 28 HET MG B 601 1 HET NA B 602 1 HET XC5 B 603 28 HETNAM NA SODIUM ION HETNAM MG MAGNESIUM ION HETNAM XC5 2'-DEOXY-5'-O-[(S)-HYDROXY{[(S)-HYDROXY(PHOSPHONOOXY) HETNAM 2 XC5 PHOSPHORYL]METHYL}PHOSPHORYL]CYTIDINE FORMUL 9 NA 2(NA 1+) FORMUL 10 MG 2(MG 2+) FORMUL 11 XC5 2(C10 H18 N3 O12 P3) FORMUL 15 HOH *327(H2 O) HELIX 1 AA1 TYR A 153 ARG A 157 5 5 HELIX 2 AA2 ASN A 165 ARG A 182 1 18 HELIX 3 AA3 ASN A 184 LEU A 201 1 18 HELIX 4 AA4 SER A 207 THR A 211 5 5 HELIX 5 AA5 GLY A 218 GLY A 232 1 15 HELIX 6 AA6 SER A 234 ASN A 242 1 9 HELIX 7 AA7 ASP A 243 THR A 253 1 11 HELIX 8 AA8 GLY A 259 GLY A 270 1 12 HELIX 9 AA9 THR A 273 SER A 279 1 7 HELIX 10 AB1 THR A 286 TYR A 295 1 10 HELIX 11 AB2 TYR A 295 SER A 301 1 7 HELIX 12 AB3 ARG A 305 LEU A 323 1 19 HELIX 13 AB4 GLY A 332 ARG A 336 1 5 HELIX 14 AB5 GLU A 357 GLN A 359 5 3 HELIX 15 AB6 GLN A 360 GLN A 372 1 13 HELIX 16 AB7 GLY A 414 VAL A 416 5 3 HELIX 17 AB8 PRO A 440 ASP A 442 5 3 HELIX 18 AB9 ARG A 443 GLY A 453 1 11 HELIX 19 AC1 SER A 454 LYS A 470 1 17 HELIX 20 AC2 SER A 491 LEU A 499 1 9 HELIX 21 AC3 GLU A 505 ARG A 509 5 5 HELIX 22 AC4 TYR B 153 ARG B 157 5 5 HELIX 23 AC5 ASN B 165 ARG B 182 1 18 HELIX 24 AC6 ASN B 184 LEU B 201 1 18 HELIX 25 AC7 SER B 207 GLU B 212 5 6 HELIX 26 AC8 GLY B 218 ASP B 231 1 14 HELIX 27 AC9 SER B 234 ASN B 242 1 9 HELIX 28 AD1 ASP B 243 SER B 254 1 12 HELIX 29 AD2 GLY B 259 GLY B 270 1 12 HELIX 30 AD3 THR B 273 SER B 279 1 7 HELIX 31 AD4 THR B 286 TYR B 295 1 10 HELIX 32 AD5 TYR B 295 SER B 301 1 7 HELIX 33 AD6 ARG B 305 LEU B 323 1 19 HELIX 34 AD7 GLY B 332 ARG B 336 1 5 HELIX 35 AD8 GLU B 357 GLN B 359 5 3 HELIX 36 AD9 GLN B 360 GLN B 372 1 13 HELIX 37 AE1 GLY B 414 VAL B 416 5 3 HELIX 38 AE2 PRO B 440 ASP B 442 5 3 HELIX 39 AE3 ARG B 443 GLY B 453 1 11 HELIX 40 AE4 SER B 454 LYS B 470 1 17 HELIX 41 AE5 SER B 491 LEU B 499 1 9 HELIX 42 AE6 GLU B 505 ARG B 509 5 5 SHEET 1 AA1 2 VAL A 303 ASN A 304 0 SHEET 2 AA1 2 THR A 340 GLY A 341 -1 O GLY A 341 N VAL A 303 SHEET 1 AA2 5 LEU A 327 THR A 331 0 SHEET 2 AA2 5 VAL A 344 THR A 349 -1 O THR A 349 N LEU A 327 SHEET 3 AA2 5 TRP A 429 MET A 438 1 O VAL A 437 N ILE A 348 SHEET 4 AA2 5 GLU A 403 ASP A 412 -1 N LEU A 409 O ILE A 432 SHEET 5 AA2 5 LEU A 375 ARG A 382 -1 N HIS A 381 O ARG A 404 SHEET 1 AA3 3 MET A 471 LEU A 473 0 SHEET 2 AA3 3 LEU A 478 ASP A 480 -1 O TYR A 479 N MET A 472 SHEET 3 AA3 3 VAL A 485 PHE A 486 -1 O VAL A 485 N ASP A 480 SHEET 1 AA4 2 VAL B 303 ASN B 304 0 SHEET 2 AA4 2 THR B 340 GLY B 341 -1 O GLY B 341 N VAL B 303 SHEET 1 AA5 5 LEU B 327 THR B 331 0 SHEET 2 AA5 5 VAL B 344 THR B 349 -1 O THR B 349 N LEU B 327 SHEET 3 AA5 5 TRP B 429 MET B 438 1 O VAL B 437 N ILE B 348 SHEET 4 AA5 5 GLU B 403 ASP B 412 -1 N LEU B 409 O ILE B 432 SHEET 5 AA5 5 LEU B 375 HIS B 381 -1 N HIS B 381 O ARG B 404 SHEET 1 AA6 3 MET B 471 LEU B 473 0 SHEET 2 AA6 3 LEU B 478 ASP B 480 -1 O TYR B 479 N MET B 472 SHEET 3 AA6 3 VAL B 485 PHE B 486 -1 O VAL B 485 N ASP B 480 LINK O THR A 253 NA NA A 601 1555 1555 2.25 LINK O VAL A 255 NA NA A 601 1555 1555 2.54 LINK O VAL A 258 NA NA A 601 1555 1555 2.47 LINK OD1 ASP A 343 MG MG A 602 1555 1555 1.98 LINK OD2 ASP A 345 MG MG A 602 1555 1555 2.21 LINK O THR B 253 NA NA B 602 1555 1555 2.30 LINK O VAL B 255 NA NA B 602 1555 1555 2.47 LINK O VAL B 258 NA NA B 602 1555 1555 2.43 LINK OD1 ASP B 343 MG MG B 601 1555 1555 2.17 LINK OD2 ASP B 345 MG MG B 601 1555 1555 1.92 LINK OP1 DT F 5 NA NA A 601 1555 1555 2.42 LINK OP1 DT L 5 NA NA B 602 1555 1555 2.54 LINK MG MG A 602 O2A XC5 A 603 1555 1555 2.30 LINK MG MG A 602 O3B XC5 A 603 1555 1555 2.31 LINK MG MG A 602 O3G XC5 A 603 1555 1555 2.09 LINK MG MG B 601 O2A XC5 B 603 1555 1555 2.13 LINK MG MG B 601 O1B XC5 B 603 1555 1555 2.14 LINK MG MG B 601 O HOH B 756 1555 1555 2.34 LINK MG MG B 601 O3G XC5 B 603 1555 1555 2.59 LINK NA NA B 602 O HOH B 782 1555 1555 2.52 LINK NA NA B 602 O HOH L 102 1555 1555 2.54 CISPEP 1 GLY A 453 SER A 454 0 -0.53 CISPEP 2 GLY B 453 SER B 454 0 -0.83 SITE 1 AC1 4 THR A 253 VAL A 255 VAL A 258 DT F 5 SITE 1 AC2 3 ASP A 343 ASP A 345 XC5 A 603 SITE 1 AC3 17 GLY A 332 GLY A 333 ARG A 336 LYS A 338 SITE 2 AC3 17 GLY A 341 HIS A 342 ASP A 343 ASP A 345 SITE 3 AC3 17 TRP A 451 THR A 452 GLY A 453 ARG A 455 SITE 4 AC3 17 MG A 602 HOH A 734 HOH A 743 DG F 6 SITE 5 AC3 17 DG H 6 SITE 1 AC4 4 ASP B 343 ASP B 345 XC5 B 603 HOH B 756 SITE 1 AC5 6 THR B 253 VAL B 255 VAL B 258 HOH B 782 SITE 2 AC5 6 DT L 5 HOH L 102 SITE 1 AC6 17 GLY B 332 GLY B 333 ARG B 336 LYS B 338 SITE 2 AC6 17 GLY B 341 HIS B 342 ASP B 343 ASP B 345 SITE 3 AC6 17 TRP B 451 THR B 452 GLY B 453 GLU B 458 SITE 4 AC6 17 MG B 601 HOH B 718 HOH B 760 DG L 6 SITE 5 AC6 17 DG N 6 CRYST1 234.180 69.250 59.690 90.00 95.20 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004270 0.000000 0.000389 0.00000 SCALE2 0.000000 0.014440 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016822 0.00000