data_6GOB # _entry.id 6GOB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6GOB pdb_00006gob 10.2210/pdb6gob/pdb WWPDB D_1200010315 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-07-25 2 'Structure model' 1 1 2018-08-08 3 'Structure model' 2 0 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' Advisory 4 3 'Structure model' 'Atomic model' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Derived calculations' 8 3 'Structure model' 'Refinement description' 9 3 'Structure model' 'Source and taxonomy' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' atom_site 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' entity_src_nat 7 3 'Structure model' pdbx_initial_refinement_model 8 3 'Structure model' pdbx_struct_assembly 9 3 'Structure model' pdbx_struct_conn_angle 10 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 11 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 3 'Structure model' '_atom_site.B_iso_or_equiv' 5 3 'Structure model' '_atom_site.Cartn_x' 6 3 'Structure model' '_atom_site.Cartn_y' 7 3 'Structure model' '_atom_site.Cartn_z' 8 3 'Structure model' '_atom_site.auth_atom_id' 9 3 'Structure model' '_atom_site.label_atom_id' 10 3 'Structure model' '_atom_site.type_symbol' 11 3 'Structure model' '_database_2.pdbx_DOI' 12 3 'Structure model' '_database_2.pdbx_database_accession' 13 3 'Structure model' '_entity_src_nat.common_name' 14 3 'Structure model' '_pdbx_struct_assembly.details' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 19 3 'Structure model' '_pdbx_struct_conn_angle.value' 20 3 'Structure model' '_struct_conn.pdbx_dist_value' 21 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 3 'Structure model' '_struct_conn.ptnr2_symmetry' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6GOB _pdbx_database_status.recvd_initial_deposition_date 2018-06-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Merlino, A.' 1 ? 'Ferraro, G.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Dalton Trans' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1477-9234 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 47 _citation.language ? _citation.page_first 10130 _citation.page_last 10138 _citation.title ;Exploring the interactions between model proteins and Pd(ii) or Pt(ii) compounds bearing charged N,N-pyridylbenzimidazole bidentate ligands by X-ray crystallography. ; _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1039/c8dt01663a _citation.pdbx_database_id_PubMed 30004541 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ferraro, G.' 1 ? primary 'Mansour, A.M.' 2 ? primary 'Merlino, A.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Lysozyme C' 14331.160 1 3.2.1.17 ? ? ? 2 non-polymer syn 'PALLADIUM ION' 106.420 2 ? ? ? ? 3 non-polymer syn 'NITRATE ION' 62.005 2 ? ? ? ? 4 non-polymer syn 'N,N-pyridylbenzimidazole derivative-Pd complex' 494.689 5 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 6 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 7 water nat water 18.015 150 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '1,4-beta-N-acetylmuramidase C,Allergen Gal d IV' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _entity_poly.pdbx_seq_one_letter_code_can ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PALLADIUM ION' PD 3 'NITRATE ION' NO3 4 'N,N-pyridylbenzimidazole derivative-Pd complex' F6Q 5 'SULFATE ION' SO4 6 'CHLORIDE ION' CL 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 VAL n 1 3 PHE n 1 4 GLY n 1 5 ARG n 1 6 CYS n 1 7 GLU n 1 8 LEU n 1 9 ALA n 1 10 ALA n 1 11 ALA n 1 12 MET n 1 13 LYS n 1 14 ARG n 1 15 HIS n 1 16 GLY n 1 17 LEU n 1 18 ASP n 1 19 ASN n 1 20 TYR n 1 21 ARG n 1 22 GLY n 1 23 TYR n 1 24 SER n 1 25 LEU n 1 26 GLY n 1 27 ASN n 1 28 TRP n 1 29 VAL n 1 30 CYS n 1 31 ALA n 1 32 ALA n 1 33 LYS n 1 34 PHE n 1 35 GLU n 1 36 SER n 1 37 ASN n 1 38 PHE n 1 39 ASN n 1 40 THR n 1 41 GLN n 1 42 ALA n 1 43 THR n 1 44 ASN n 1 45 ARG n 1 46 ASN n 1 47 THR n 1 48 ASP n 1 49 GLY n 1 50 SER n 1 51 THR n 1 52 ASP n 1 53 TYR n 1 54 GLY n 1 55 ILE n 1 56 LEU n 1 57 GLN n 1 58 ILE n 1 59 ASN n 1 60 SER n 1 61 ARG n 1 62 TRP n 1 63 TRP n 1 64 CYS n 1 65 ASN n 1 66 ASP n 1 67 GLY n 1 68 ARG n 1 69 THR n 1 70 PRO n 1 71 GLY n 1 72 SER n 1 73 ARG n 1 74 ASN n 1 75 LEU n 1 76 CYS n 1 77 ASN n 1 78 ILE n 1 79 PRO n 1 80 CYS n 1 81 SER n 1 82 ALA n 1 83 LEU n 1 84 LEU n 1 85 SER n 1 86 SER n 1 87 ASP n 1 88 ILE n 1 89 THR n 1 90 ALA n 1 91 SER n 1 92 VAL n 1 93 ASN n 1 94 CYS n 1 95 ALA n 1 96 LYS n 1 97 LYS n 1 98 ILE n 1 99 VAL n 1 100 SER n 1 101 ASP n 1 102 GLY n 1 103 ASN n 1 104 GLY n 1 105 MET n 1 106 ASN n 1 107 ALA n 1 108 TRP n 1 109 VAL n 1 110 ALA n 1 111 TRP n 1 112 ARG n 1 113 ASN n 1 114 ARG n 1 115 CYS n 1 116 LYS n 1 117 GLY n 1 118 THR n 1 119 ASP n 1 120 VAL n 1 121 GLN n 1 122 ALA n 1 123 TRP n 1 124 ILE n 1 125 ARG n 1 126 GLY n 1 127 CYS n 1 128 ARG n 1 129 LEU n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 129 _entity_src_nat.common_name chicken _entity_src_nat.pdbx_organism_scientific 'Gallus gallus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9031 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 F6Q non-polymer . 'N,N-pyridylbenzimidazole derivative-Pd complex' ? 'C15 H15 Cl2 N3 O3 Pd S 2' 494.689 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NO3 non-polymer . 'NITRATE ION' ? 'N O3 -1' 62.005 PD non-polymer . 'PALLADIUM ION' ? 'Pd 2' 106.420 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 MET 12 12 12 MET MET A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 HIS 15 15 15 HIS HIS A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 TRP 28 28 28 TRP TRP A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 CYS 30 30 30 CYS CYS A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 TRP 62 62 62 TRP TRP A . n A 1 63 TRP 63 63 63 TRP TRP A . n A 1 64 CYS 64 64 64 CYS CYS A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 CYS 76 76 76 CYS CYS A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 CYS 80 80 80 CYS CYS A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 CYS 94 94 94 CYS CYS A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 MET 105 105 105 MET MET A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 TRP 108 108 108 TRP TRP A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 TRP 111 111 111 TRP TRP A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 ARG 114 114 114 ARG ARG A . n A 1 115 CYS 115 115 115 CYS CYS A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 TRP 123 123 123 TRP TRP A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 CYS 127 127 127 CYS CYS A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 LEU 129 129 129 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PD 1 201 5 PD PD A . C 2 PD 1 202 6 PD PD A . D 3 NO3 1 203 1 NO3 NO3 A . E 3 NO3 1 204 2 NO3 NO3 A . F 4 F6Q 1 205 1 F6Q XXX A . G 4 F6Q 1 206 2 F6Q XXX A . H 4 F6Q 1 207 3 F6Q XXX A . I 4 F6Q 1 208 4 F6Q XXX A . J 4 F6Q 1 209 5 F6Q XXX A . K 5 SO4 1 210 1 SO4 SO4 A . L 5 SO4 1 211 2 SO4 SO4 A . M 6 CL 1 212 7 CL CL A . N 6 CL 1 213 8 CL CL A . O 7 HOH 1 301 125 HOH HOH A . O 7 HOH 2 302 133 HOH HOH A . O 7 HOH 3 303 94 HOH HOH A . O 7 HOH 4 304 64 HOH HOH A . O 7 HOH 5 305 7 HOH HOH A . O 7 HOH 6 306 128 HOH HOH A . O 7 HOH 7 307 37 HOH HOH A . O 7 HOH 8 308 91 HOH HOH A . O 7 HOH 9 309 167 HOH HOH A . O 7 HOH 10 310 24 HOH HOH A . O 7 HOH 11 311 137 HOH HOH A . O 7 HOH 12 312 86 HOH HOH A . O 7 HOH 13 313 144 HOH HOH A . O 7 HOH 14 314 36 HOH HOH A . O 7 HOH 15 315 102 HOH HOH A . O 7 HOH 16 316 93 HOH HOH A . O 7 HOH 17 317 3 HOH HOH A . O 7 HOH 18 318 153 HOH HOH A . O 7 HOH 19 319 19 HOH HOH A . O 7 HOH 20 320 5 HOH HOH A . O 7 HOH 21 321 68 HOH HOH A . O 7 HOH 22 322 140 HOH HOH A . O 7 HOH 23 323 83 HOH HOH A . O 7 HOH 24 324 4 HOH HOH A . O 7 HOH 25 325 1 HOH HOH A . O 7 HOH 26 326 129 HOH HOH A . O 7 HOH 27 327 77 HOH HOH A . O 7 HOH 28 328 56 HOH HOH A . O 7 HOH 29 329 52 HOH HOH A . O 7 HOH 30 330 89 HOH HOH A . O 7 HOH 31 331 48 HOH HOH A . O 7 HOH 32 332 163 HOH HOH A . O 7 HOH 33 333 32 HOH HOH A . O 7 HOH 34 334 39 HOH HOH A . O 7 HOH 35 335 164 HOH HOH A . O 7 HOH 36 336 50 HOH HOH A . O 7 HOH 37 337 34 HOH HOH A . O 7 HOH 38 338 151 HOH HOH A . O 7 HOH 39 339 95 HOH HOH A . O 7 HOH 40 340 43 HOH HOH A . O 7 HOH 41 341 59 HOH HOH A . O 7 HOH 42 342 8 HOH HOH A . O 7 HOH 43 343 98 HOH HOH A . O 7 HOH 44 344 105 HOH HOH A . O 7 HOH 45 345 72 HOH HOH A . O 7 HOH 46 346 101 HOH HOH A . O 7 HOH 47 347 135 HOH HOH A . O 7 HOH 48 348 134 HOH HOH A . O 7 HOH 49 349 16 HOH HOH A . O 7 HOH 50 350 26 HOH HOH A . O 7 HOH 51 351 162 HOH HOH A . O 7 HOH 52 352 38 HOH HOH A . O 7 HOH 53 353 35 HOH HOH A . O 7 HOH 54 354 22 HOH HOH A . O 7 HOH 55 355 113 HOH HOH A . O 7 HOH 56 356 20 HOH HOH A . O 7 HOH 57 357 6 HOH HOH A . O 7 HOH 58 358 138 HOH HOH A . O 7 HOH 59 359 146 HOH HOH A . O 7 HOH 60 360 71 HOH HOH A . O 7 HOH 61 361 108 HOH HOH A . O 7 HOH 62 362 157 HOH HOH A . O 7 HOH 63 363 2 HOH HOH A . O 7 HOH 64 364 47 HOH HOH A . O 7 HOH 65 365 88 HOH HOH A . O 7 HOH 66 366 63 HOH HOH A . O 7 HOH 67 367 126 HOH HOH A . O 7 HOH 68 368 29 HOH HOH A . O 7 HOH 69 369 15 HOH HOH A . O 7 HOH 70 370 165 HOH HOH A . O 7 HOH 71 371 73 HOH HOH A . O 7 HOH 72 372 53 HOH HOH A . O 7 HOH 73 373 121 HOH HOH A . O 7 HOH 74 374 21 HOH HOH A . O 7 HOH 75 375 118 HOH HOH A . O 7 HOH 76 376 9 HOH HOH A . O 7 HOH 77 377 116 HOH HOH A . O 7 HOH 78 378 27 HOH HOH A . O 7 HOH 79 379 44 HOH HOH A . O 7 HOH 80 380 57 HOH HOH A . O 7 HOH 81 381 152 HOH HOH A . O 7 HOH 82 382 143 HOH HOH A . O 7 HOH 83 383 147 HOH HOH A . O 7 HOH 84 384 141 HOH HOH A . O 7 HOH 85 385 75 HOH HOH A . O 7 HOH 86 386 107 HOH HOH A . O 7 HOH 87 387 110 HOH HOH A . O 7 HOH 88 388 12 HOH HOH A . O 7 HOH 89 389 18 HOH HOH A . O 7 HOH 90 390 60 HOH HOH A . O 7 HOH 91 391 122 HOH HOH A . O 7 HOH 92 392 123 HOH HOH A . O 7 HOH 93 393 120 HOH HOH A . O 7 HOH 94 394 66 HOH HOH A . O 7 HOH 95 395 65 HOH HOH A . O 7 HOH 96 396 90 HOH HOH A . O 7 HOH 97 397 67 HOH HOH A . O 7 HOH 98 398 13 HOH HOH A . O 7 HOH 99 399 103 HOH HOH A . O 7 HOH 100 400 132 HOH HOH A . O 7 HOH 101 401 80 HOH HOH A . O 7 HOH 102 402 100 HOH HOH A . O 7 HOH 103 403 28 HOH HOH A . O 7 HOH 104 404 127 HOH HOH A . O 7 HOH 105 405 150 HOH HOH A . O 7 HOH 106 406 119 HOH HOH A . O 7 HOH 107 407 109 HOH HOH A . O 7 HOH 108 408 131 HOH HOH A . O 7 HOH 109 409 76 HOH HOH A . O 7 HOH 110 410 79 HOH HOH A . O 7 HOH 111 411 69 HOH HOH A . O 7 HOH 112 412 145 HOH HOH A . O 7 HOH 113 413 149 HOH HOH A . O 7 HOH 114 414 117 HOH HOH A . O 7 HOH 115 415 166 HOH HOH A . O 7 HOH 116 416 45 HOH HOH A . O 7 HOH 117 417 46 HOH HOH A . O 7 HOH 118 418 130 HOH HOH A . O 7 HOH 119 419 70 HOH HOH A . O 7 HOH 120 420 82 HOH HOH A . O 7 HOH 121 421 92 HOH HOH A . O 7 HOH 122 422 17 HOH HOH A . O 7 HOH 123 423 58 HOH HOH A . O 7 HOH 124 424 148 HOH HOH A . O 7 HOH 125 425 87 HOH HOH A . O 7 HOH 126 426 42 HOH HOH A . O 7 HOH 127 427 96 HOH HOH A . O 7 HOH 128 428 156 HOH HOH A . O 7 HOH 129 429 106 HOH HOH A . O 7 HOH 130 430 111 HOH HOH A . O 7 HOH 131 431 154 HOH HOH A . O 7 HOH 132 432 54 HOH HOH A . O 7 HOH 133 433 40 HOH HOH A . O 7 HOH 134 434 136 HOH HOH A . O 7 HOH 135 435 25 HOH HOH A . O 7 HOH 136 436 155 HOH HOH A . O 7 HOH 137 437 51 HOH HOH A . O 7 HOH 138 438 81 HOH HOH A . O 7 HOH 139 439 142 HOH HOH A . O 7 HOH 140 440 139 HOH HOH A . O 7 HOH 141 441 114 HOH HOH A . O 7 HOH 142 442 84 HOH HOH A . O 7 HOH 143 443 99 HOH HOH A . O 7 HOH 144 444 104 HOH HOH A . O 7 HOH 145 445 97 HOH HOH A . O 7 HOH 146 446 49 HOH HOH A . O 7 HOH 147 447 78 HOH HOH A . O 7 HOH 148 448 159 HOH HOH A . O 7 HOH 149 449 160 HOH HOH A . O 7 HOH 150 450 161 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.entry_id 6GOB _cell.length_a 79.487 _cell.length_b 79.487 _cell.length_c 37.309 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GOB _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6GOB _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.06 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 40.18 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.4 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;20% ethylene glycol 0.1 M sodium acetate pH 4.4 0.6 M sodium nitrate ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU SATURN 944' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-03-12 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type RIGAKU _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6GOB _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.96 _reflns.d_resolution_low 56.21 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8938 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.9 _reflns.pdbx_Rmerge_I_obs 0.107 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.96 _reflns_shell.d_res_low 1.99 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.5 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 428 _reflns_shell.percent_possible_all 98.6 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.505 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.775 _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 6GOB _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 8480 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 56.21 _refine.ls_d_res_high 1.96 _refine.ls_percent_reflns_obs 99.09 _refine.ls_R_factor_obs 0.17259 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.16939 _refine.ls_R_factor_R_free 0.23149 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 434 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.949 _refine.correlation_coeff_Fo_to_Fc_free 0.923 _refine.B_iso_mean 27.259 _refine.aniso_B[1][1] 0.33 _refine.aniso_B[2][2] 0.33 _refine.aniso_B[3][3] -0.66 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 1DPX _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.235 _refine.pdbx_overall_ESU_R_Free 0.188 _refine.overall_SU_ML 0.136 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.886 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1001 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 141 _refine_hist.number_atoms_solvent 150 _refine_hist.number_atoms_total 1292 _refine_hist.d_res_high 1.96 _refine_hist.d_res_low 56.21 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.020 ? 1266 'X-RAY DIFFRACTION' ? r_bond_other_d 0.010 0.021 ? 1065 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.215 2.098 ? 1746 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.862 3.025 ? 2452 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.194 5.000 ? 144 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.725 22.321 ? 56 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.137 15.000 ? 185 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.534 15.000 ? 15 'X-RAY DIFFRACTION' ? r_chiral_restr 0.090 0.200 ? 160 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.048 0.023 ? 1465 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.003 0.025 ? 315 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.684 2.381 ? 555 'X-RAY DIFFRACTION' ? r_mcbond_other 1.684 2.379 ? 554 'X-RAY DIFFRACTION' ? r_mcangle_it 2.355 3.568 ? 707 'X-RAY DIFFRACTION' ? r_mcangle_other 2.346 3.567 ? 707 'X-RAY DIFFRACTION' ? r_scbond_it 2.623 2.907 ? 710 'X-RAY DIFFRACTION' ? r_scbond_other 2.499 2.898 ? 703 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 4.057 4.285 ? 1045 'X-RAY DIFFRACTION' ? r_long_range_B_refined 5.822 28.807 ? 1943 'X-RAY DIFFRACTION' ? r_long_range_B_other 5.819 28.816 ? 1942 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.962 _refine_ls_shell.d_res_low 2.013 _refine_ls_shell.number_reflns_R_work 578 _refine_ls_shell.R_factor_R_work 0.219 _refine_ls_shell.percent_reflns_obs 94.88 _refine_ls_shell.R_factor_R_free 0.306 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 33 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 6GOB _struct.title ;X-ray structure of the adduct formed upon reaction of lysozyme with a Pd(II) complex bearing N,N-pyridylbenzimidazole derivative with an alkylated sulphonate side chain ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6GOB _struct_keywords.text ;protein-metallodrug interaction, palladium-based drug, N-pyridylbenzimidazole bidentate ligands, stacking, non covalent bond, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 5 ? L N N 5 ? M N N 6 ? N N N 6 ? O N N 7 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LYSC_CHICK _struct_ref.pdbx_db_accession P00698 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _struct_ref.pdbx_align_begin 19 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6GOB _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 129 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00698 _struct_ref_seq.db_align_beg 19 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 147 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 129 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1120 ? 1 MORE -47 ? 1 'SSA (A^2)' 8050 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 4 ? HIS A 15 ? GLY A 4 HIS A 15 1 ? 12 HELX_P HELX_P2 AA2 ASN A 19 ? TYR A 23 ? ASN A 19 TYR A 23 5 ? 5 HELX_P HELX_P3 AA3 SER A 24 ? ASN A 37 ? SER A 24 ASN A 37 1 ? 14 HELX_P HELX_P4 AA4 PRO A 79 ? SER A 85 ? PRO A 79 SER A 85 5 ? 7 HELX_P HELX_P5 AA5 ILE A 88 ? ASP A 101 ? ILE A 88 ASP A 101 1 ? 14 HELX_P HELX_P6 AA6 ASN A 103 ? ALA A 107 ? ASN A 103 ALA A 107 5 ? 5 HELX_P HELX_P7 AA7 TRP A 108 ? CYS A 115 ? TRP A 108 CYS A 115 1 ? 8 HELX_P HELX_P8 AA8 ASP A 119 ? ARG A 125 ? ASP A 119 ARG A 125 5 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 127 SG ? ? A CYS 6 A CYS 127 1_555 ? ? ? ? ? ? ? 1.986 ? ? disulf2 disulf ? ? A CYS 30 SG ? ? ? 1_555 A CYS 115 SG ? ? A CYS 30 A CYS 115 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf3 disulf ? ? A CYS 64 SG ? ? ? 1_555 A CYS 80 SG ? ? A CYS 64 A CYS 80 1_555 ? ? ? ? ? ? ? 2.061 ? ? disulf4 disulf ? ? A CYS 76 SG ? ? ? 1_555 A CYS 94 SG ? ? A CYS 76 A CYS 94 1_555 ? ? ? ? ? ? ? 2.034 ? ? metalc1 metalc ? ? A HIS 15 ND1 ? ? ? 1_555 J F6Q . PD ? ? A HIS 15 A F6Q 209 1_555 ? ? ? ? ? ? ? 2.298 ? ? metalc2 metalc ? ? A ASN 77 OD1 ? ? ? 1_555 C PD . PD ? ? A ASN 77 A PD 202 1_555 ? ? ? ? ? ? ? 2.352 ? ? metalc3 metalc ? ? A ASP 87 OD2 ? ? ? 1_555 B PD . PD ? ? A ASP 87 A PD 201 1_555 ? ? ? ? ? ? ? 1.945 ? ? metalc4 metalc ? ? A ASP 101 OD1 A ? ? 1_555 H F6Q . PD ? ? A ASP 101 A F6Q 207 1_555 ? ? ? ? ? ? ? 2.693 ? ? metalc5 metalc ? ? A ASP 101 OD1 B ? ? 1_555 H F6Q . PD ? ? A ASP 101 A F6Q 207 1_555 ? ? ? ? ? ? ? 1.936 ? ? metalc6 metalc ? ? B PD . PD ? ? ? 1_555 O HOH . O ? ? A PD 201 A HOH 373 7_555 ? ? ? ? ? ? ? 2.093 ? ? metalc7 metalc ? ? B PD . PD ? ? ? 1_555 O HOH . O ? ? A PD 201 A HOH 393 1_555 ? ? ? ? ? ? ? 2.341 ? ? metalc8 metalc ? ? C PD . PD ? ? ? 1_555 O HOH . O ? ? A PD 202 A HOH 308 1_555 ? ? ? ? ? ? ? 2.331 ? ? metalc9 metalc ? ? I F6Q . PD ? ? ? 1_555 O HOH . O ? ? A F6Q 208 A HOH 330 1_555 ? ? ? ? ? ? ? 2.125 ? ? metalc10 metalc ? ? I F6Q . PD ? ? ? 1_555 O HOH . O ? ? A F6Q 208 A HOH 365 1_555 ? ? ? ? ? ? ? 2.350 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 ND1 ? A HIS 15 ? A HIS 15 ? 1_555 PD ? J F6Q . ? A F6Q 209 ? 1_555 NAL A J F6Q . ? A F6Q 209 ? 1_555 175.1 ? 2 ND1 ? A HIS 15 ? A HIS 15 ? 1_555 PD ? J F6Q . ? A F6Q 209 ? 1_555 NAQ A J F6Q . ? A F6Q 209 ? 1_555 92.7 ? 3 NAL A J F6Q . ? A F6Q 209 ? 1_555 PD ? J F6Q . ? A F6Q 209 ? 1_555 NAQ A J F6Q . ? A F6Q 209 ? 1_555 82.4 ? 4 ND1 ? A HIS 15 ? A HIS 15 ? 1_555 PD ? J F6Q . ? A F6Q 209 ? 1_555 CL2 ? J F6Q . ? A F6Q 209 ? 1_555 85.2 ? 5 NAL A J F6Q . ? A F6Q 209 ? 1_555 PD ? J F6Q . ? A F6Q 209 ? 1_555 CL2 ? J F6Q . ? A F6Q 209 ? 1_555 99.7 ? 6 NAQ A J F6Q . ? A F6Q 209 ? 1_555 PD ? J F6Q . ? A F6Q 209 ? 1_555 CL2 ? J F6Q . ? A F6Q 209 ? 1_555 177.6 ? 7 OD1 ? A ASN 77 ? A ASN 77 ? 1_555 PD ? C PD . ? A PD 202 ? 1_555 O ? O HOH . ? A HOH 308 ? 1_555 63.8 ? 8 OD2 ? A ASP 87 ? A ASP 87 ? 1_555 PD ? B PD . ? A PD 201 ? 1_555 O ? O HOH . ? A HOH 373 ? 7_555 172.8 ? 9 OD2 ? A ASP 87 ? A ASP 87 ? 1_555 PD ? B PD . ? A PD 201 ? 1_555 O ? O HOH . ? A HOH 393 ? 1_555 90.7 ? 10 O ? O HOH . ? A HOH 373 ? 7_555 PD ? B PD . ? A PD 201 ? 1_555 O ? O HOH . ? A HOH 393 ? 1_555 93.6 ? 11 OD1 A A ASP 101 ? A ASP 101 ? 1_555 PD ? H F6Q . ? A F6Q 207 ? 1_555 NAL ? H F6Q . ? A F6Q 207 ? 1_555 125.3 ? 12 OD1 A A ASP 101 ? A ASP 101 ? 1_555 PD ? H F6Q . ? A F6Q 207 ? 1_555 NAQ ? H F6Q . ? A F6Q 207 ? 1_555 136.2 ? 13 NAL ? H F6Q . ? A F6Q 207 ? 1_555 PD ? H F6Q . ? A F6Q 207 ? 1_555 NAQ ? H F6Q . ? A F6Q 207 ? 1_555 72.2 ? 14 OD1 A A ASP 101 ? A ASP 101 ? 1_555 PD ? H F6Q . ? A F6Q 207 ? 1_555 CL2 ? H F6Q . ? A F6Q 207 ? 1_555 77.9 ? 15 NAL ? H F6Q . ? A F6Q 207 ? 1_555 PD ? H F6Q . ? A F6Q 207 ? 1_555 CL2 ? H F6Q . ? A F6Q 207 ? 1_555 151.7 ? 16 NAQ ? H F6Q . ? A F6Q 207 ? 1_555 PD ? H F6Q . ? A F6Q 207 ? 1_555 CL2 ? H F6Q . ? A F6Q 207 ? 1_555 79.6 ? 17 OD1 A A ASP 101 ? A ASP 101 ? 1_555 PD ? H F6Q . ? A F6Q 207 ? 1_555 OD1 B A ASP 101 ? A ASP 101 ? 1_555 45.0 ? 18 NAL ? H F6Q . ? A F6Q 207 ? 1_555 PD ? H F6Q . ? A F6Q 207 ? 1_555 OD1 B A ASP 101 ? A ASP 101 ? 1_555 119.7 ? 19 NAQ ? H F6Q . ? A F6Q 207 ? 1_555 PD ? H F6Q . ? A F6Q 207 ? 1_555 OD1 B A ASP 101 ? A ASP 101 ? 1_555 166.0 ? 20 CL2 ? H F6Q . ? A F6Q 207 ? 1_555 PD ? H F6Q . ? A F6Q 207 ? 1_555 OD1 B A ASP 101 ? A ASP 101 ? 1_555 87.9 ? 21 O ? O HOH . ? A HOH 330 ? 1_555 PD ? I F6Q . ? A F6Q 208 ? 1_555 NAL A I F6Q . ? A F6Q 208 ? 1_555 178.1 ? 22 O ? O HOH . ? A HOH 330 ? 1_555 PD ? I F6Q . ? A F6Q 208 ? 1_555 NAQ A I F6Q . ? A F6Q 208 ? 1_555 85.6 ? 23 NAL A I F6Q . ? A F6Q 208 ? 1_555 PD ? I F6Q . ? A F6Q 208 ? 1_555 NAQ A I F6Q . ? A F6Q 208 ? 1_555 94.8 ? 24 O ? O HOH . ? A HOH 330 ? 1_555 PD ? I F6Q . ? A F6Q 208 ? 1_555 O ? O HOH . ? A HOH 365 ? 1_555 93.4 ? 25 NAL A I F6Q . ? A F6Q 208 ? 1_555 PD ? I F6Q . ? A F6Q 208 ? 1_555 O ? O HOH . ? A HOH 365 ? 1_555 86.1 ? 26 NAQ A I F6Q . ? A F6Q 208 ? 1_555 PD ? I F6Q . ? A F6Q 208 ? 1_555 O ? O HOH . ? A HOH 365 ? 1_555 178.6 ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 43 ? ARG A 45 ? THR A 43 ARG A 45 AA1 2 THR A 51 ? TYR A 53 ? THR A 51 TYR A 53 AA1 3 ILE A 58 ? ASN A 59 ? ILE A 58 ASN A 59 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASN A 44 ? N ASN A 44 O ASP A 52 ? O ASP A 52 AA1 2 3 N TYR A 53 ? N TYR A 53 O ILE A 58 ? O ILE A 58 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PD 201 ? 6 'binding site for residue PD A 201' AC2 Software A PD 202 ? 5 'binding site for residue PD A 202' AC3 Software A NO3 203 ? 10 'binding site for residue NO3 A 203' AC4 Software A NO3 204 ? 6 'binding site for residue NO3 A 204' AC5 Software A F6Q 205 ? 10 'binding site for residue F6Q A 205' AC6 Software A F6Q 206 ? 13 'binding site for residue F6Q A 206' AC7 Software A F6Q 207 ? 11 'binding site for residue F6Q A 207' AC8 Software A F6Q 208 ? 12 'binding site for residue F6Q A 208' AC9 Software A F6Q 209 ? 10 'binding site for residue F6Q A 209' AD1 Software A SO4 210 ? 7 'binding site for residue SO4 A 210' AD2 Software A SO4 211 ? 3 'binding site for residue SO4 A 211' AD3 Software A CL 212 ? 4 'binding site for residue CL A 212' AD4 Software A CL 213 ? 4 'binding site for residue CL A 213' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 87 ? ASP A 87 . ? 1_555 ? 2 AC1 6 THR A 89 ? THR A 89 . ? 1_555 ? 3 AC1 6 F6Q I . ? F6Q A 208 . ? 7_555 ? 4 AC1 6 CL M . ? CL A 212 . ? 1_555 ? 5 AC1 6 HOH O . ? HOH A 373 . ? 7_555 ? 6 AC1 6 HOH O . ? HOH A 393 . ? 1_555 ? 7 AC2 5 ASN A 77 ? ASN A 77 . ? 1_555 ? 8 AC2 5 F6Q I . ? F6Q A 208 . ? 1_555 ? 9 AC2 5 CL N . ? CL A 213 . ? 1_555 ? 10 AC2 5 HOH O . ? HOH A 308 . ? 1_555 ? 11 AC2 5 HOH O . ? HOH A 365 . ? 1_555 ? 12 AC3 10 CYS A 64 ? CYS A 64 . ? 1_555 ? 13 AC3 10 ASN A 65 ? ASN A 65 . ? 1_555 ? 14 AC3 10 ASP A 66 ? ASP A 66 . ? 1_555 ? 15 AC3 10 GLY A 67 ? GLY A 67 . ? 1_555 ? 16 AC3 10 ARG A 68 ? ARG A 68 . ? 1_555 ? 17 AC3 10 THR A 69 ? THR A 69 . ? 1_555 ? 18 AC3 10 SER A 72 ? SER A 72 . ? 1_555 ? 19 AC3 10 HOH O . ? HOH A 305 . ? 1_555 ? 20 AC3 10 HOH O . ? HOH A 342 . ? 1_555 ? 21 AC3 10 HOH O . ? HOH A 435 . ? 1_555 ? 22 AC4 6 ALA A 10 ? ALA A 10 . ? 1_555 ? 23 AC4 6 ALA A 10 ? ALA A 10 . ? 7_554 ? 24 AC4 6 LYS A 13 ? LYS A 13 . ? 1_555 ? 25 AC4 6 ARG A 14 ? ARG A 14 . ? 1_555 ? 26 AC4 6 ARG A 14 ? ARG A 14 . ? 7_554 ? 27 AC4 6 LEU A 129 ? LEU A 129 . ? 1_555 ? 28 AC5 10 ARG A 5 ? ARG A 5 . ? 1_555 ? 29 AC5 10 SER A 100 ? SER A 100 . ? 1_554 ? 30 AC5 10 ASP A 101 ? ASP A 101 . ? 1_554 ? 31 AC5 10 ALA A 122 ? ALA A 122 . ? 1_555 ? 32 AC5 10 ARG A 125 ? ARG A 125 . ? 1_555 ? 33 AC5 10 GLY A 126 ? GLY A 126 . ? 1_555 ? 34 AC5 10 F6Q H . ? F6Q A 207 . ? 1_554 ? 35 AC5 10 HOH O . ? HOH A 322 . ? 1_555 ? 36 AC5 10 HOH O . ? HOH A 367 . ? 1_555 ? 37 AC5 10 HOH O . ? HOH A 375 . ? 1_555 ? 38 AC6 13 TRP A 62 ? TRP A 62 . ? 1_554 ? 39 AC6 13 ASP A 101 ? ASP A 101 . ? 1_554 ? 40 AC6 13 GLY A 102 ? GLY A 102 . ? 1_554 ? 41 AC6 13 ASN A 103 ? ASN A 103 . ? 1_554 ? 42 AC6 13 GLY A 117 ? GLY A 117 . ? 3_454 ? 43 AC6 13 THR A 118 ? THR A 118 . ? 3_454 ? 44 AC6 13 ASP A 119 ? ASP A 119 . ? 3_454 ? 45 AC6 13 GLN A 121 ? GLN A 121 . ? 3_454 ? 46 AC6 13 F6Q H . ? F6Q A 207 . ? 1_554 ? 47 AC6 13 HOH O . ? HOH A 302 . ? 1_555 ? 48 AC6 13 HOH O . ? HOH A 309 . ? 4_444 ? 49 AC6 13 HOH O . ? HOH A 326 . ? 1_555 ? 50 AC6 13 HOH O . ? HOH A 348 . ? 1_555 ? 51 AC7 11 LYS A 33 ? LYS A 33 . ? 1_556 ? 52 AC7 11 ASN A 37 ? ASN A 37 . ? 1_556 ? 53 AC7 11 TRP A 62 ? TRP A 62 . ? 1_555 ? 54 AC7 11 TRP A 63 ? TRP A 63 . ? 1_555 ? 55 AC7 11 ARG A 73 ? ARG A 73 . ? 1_555 ? 56 AC7 11 LEU A 75 ? LEU A 75 . ? 1_555 ? 57 AC7 11 ASP A 101 ? ASP A 101 . ? 1_555 ? 58 AC7 11 GLY A 102 ? GLY A 102 . ? 1_555 ? 59 AC7 11 F6Q F . ? F6Q A 205 . ? 1_556 ? 60 AC7 11 F6Q G . ? F6Q A 206 . ? 1_556 ? 61 AC7 11 HOH O . ? HOH A 381 . ? 1_555 ? 62 AC8 12 LYS A 1 ? LYS A 1 . ? 1_556 ? 63 AC8 12 ASP A 87 ? ASP A 87 . ? 7_555 ? 64 AC8 12 PD B . ? PD A 201 . ? 7_555 ? 65 AC8 12 PD C . ? PD A 202 . ? 1_555 ? 66 AC8 12 CL M . ? CL A 212 . ? 7_555 ? 67 AC8 12 HOH O . ? HOH A 315 . ? 1_555 ? 68 AC8 12 HOH O . ? HOH A 330 . ? 1_555 ? 69 AC8 12 HOH O . ? HOH A 359 . ? 1_556 ? 70 AC8 12 HOH O . ? HOH A 365 . ? 1_555 ? 71 AC8 12 HOH O . ? HOH A 373 . ? 1_555 ? 72 AC8 12 HOH O . ? HOH A 383 . ? 1_556 ? 73 AC8 12 HOH O . ? HOH A 412 . ? 1_556 ? 74 AC9 10 ARG A 14 ? ARG A 14 . ? 1_555 ? 75 AC9 10 HIS A 15 ? HIS A 15 . ? 1_555 ? 76 AC9 10 THR A 47 ? THR A 47 . ? 5_444 ? 77 AC9 10 VAL A 92 ? VAL A 92 . ? 1_555 ? 78 AC9 10 ASN A 93 ? ASN A 93 . ? 1_555 ? 79 AC9 10 LYS A 96 ? LYS A 96 . ? 1_555 ? 80 AC9 10 ARG A 128 ? ARG A 128 . ? 7_554 ? 81 AC9 10 HOH O . ? HOH A 301 . ? 1_555 ? 82 AC9 10 HOH O . ? HOH A 355 . ? 7_554 ? 83 AC9 10 HOH O . ? HOH A 421 . ? 1_555 ? 84 AD1 7 LEU A 56 ? LEU A 56 . ? 1_555 ? 85 AD1 7 GLN A 57 ? GLN A 57 . ? 1_555 ? 86 AD1 7 ILE A 58 ? ILE A 58 . ? 1_555 ? 87 AD1 7 ASN A 59 ? ASN A 59 . ? 1_555 ? 88 AD1 7 TRP A 63 ? TRP A 63 . ? 1_555 ? 89 AD1 7 ALA A 107 ? ALA A 107 . ? 1_555 ? 90 AD1 7 TRP A 108 ? TRP A 108 . ? 1_555 ? 91 AD2 3 LYS A 116 ? LYS A 116 . ? 1_555 ? 92 AD2 3 LYS A 116 ? LYS A 116 . ? 4_445 ? 93 AD2 3 GLY A 117 ? GLY A 117 . ? 4_445 ? 94 AD3 4 ASP A 87 ? ASP A 87 . ? 1_555 ? 95 AD3 4 PD B . ? PD A 201 . ? 1_555 ? 96 AD3 4 F6Q I . ? F6Q A 208 . ? 7_555 ? 97 AD3 4 HOH O . ? HOH A 373 . ? 7_555 ? 98 AD4 4 ASN A 77 ? ASN A 77 . ? 1_555 ? 99 AD4 4 PD C . ? PD A 202 . ? 1_555 ? 100 AD4 4 HOH O . ? HOH A 308 . ? 1_555 ? 101 AD4 4 HOH O . ? HOH A 441 . ? 1_555 ? # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 350 ? O HOH . 2 1 A HOH 422 ? O HOH . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 F6Q OAU O N N 89 F6Q SAV S N N 90 F6Q OAS O N N 91 F6Q OAT O N N 92 F6Q CAP C N N 93 F6Q CAO C N N 94 F6Q CAN C N N 95 F6Q NAM N Y N 96 F6Q CAB C Y N 97 F6Q CAC C Y N 98 F6Q CAD C Y N 99 F6Q CAE C Y N 100 F6Q CAF C Y N 101 F6Q CAA C Y N 102 F6Q NAL N Y N 103 F6Q CAG C Y N 104 F6Q CAH C Y N 105 F6Q NAQ N Y N 106 F6Q CAI C Y N 107 F6Q CAK C Y N 108 F6Q CAJ C Y N 109 F6Q CAR C Y N 110 F6Q CL2 CL N N 111 F6Q PD PD N N 112 F6Q H1 H N N 113 F6Q H2 H N N 114 F6Q H3 H N N 115 F6Q H4 H N N 116 F6Q H5 H N N 117 F6Q H6 H N N 118 F6Q H7 H N N 119 F6Q H8 H N N 120 F6Q H9 H N N 121 F6Q H10 H N N 122 F6Q H11 H N N 123 F6Q H12 H N N 124 F6Q H13 H N N 125 F6Q H14 H N N 126 F6Q CL1 CL N N 127 F6Q H16 H N N 128 GLN N N N N 129 GLN CA C N S 130 GLN C C N N 131 GLN O O N N 132 GLN CB C N N 133 GLN CG C N N 134 GLN CD C N N 135 GLN OE1 O N N 136 GLN NE2 N N N 137 GLN OXT O N N 138 GLN H H N N 139 GLN H2 H N N 140 GLN HA H N N 141 GLN HB2 H N N 142 GLN HB3 H N N 143 GLN HG2 H N N 144 GLN HG3 H N N 145 GLN HE21 H N N 146 GLN HE22 H N N 147 GLN HXT H N N 148 GLU N N N N 149 GLU CA C N S 150 GLU C C N N 151 GLU O O N N 152 GLU CB C N N 153 GLU CG C N N 154 GLU CD C N N 155 GLU OE1 O N N 156 GLU OE2 O N N 157 GLU OXT O N N 158 GLU H H N N 159 GLU H2 H N N 160 GLU HA H N N 161 GLU HB2 H N N 162 GLU HB3 H N N 163 GLU HG2 H N N 164 GLU HG3 H N N 165 GLU HE2 H N N 166 GLU HXT H N N 167 GLY N N N N 168 GLY CA C N N 169 GLY C C N N 170 GLY O O N N 171 GLY OXT O N N 172 GLY H H N N 173 GLY H2 H N N 174 GLY HA2 H N N 175 GLY HA3 H N N 176 GLY HXT H N N 177 HIS N N N N 178 HIS CA C N S 179 HIS C C N N 180 HIS O O N N 181 HIS CB C N N 182 HIS CG C Y N 183 HIS ND1 N Y N 184 HIS CD2 C Y N 185 HIS CE1 C Y N 186 HIS NE2 N Y N 187 HIS OXT O N N 188 HIS H H N N 189 HIS H2 H N N 190 HIS HA H N N 191 HIS HB2 H N N 192 HIS HB3 H N N 193 HIS HD1 H N N 194 HIS HD2 H N N 195 HIS HE1 H N N 196 HIS HE2 H N N 197 HIS HXT H N N 198 HOH O O N N 199 HOH H1 H N N 200 HOH H2 H N N 201 ILE N N N N 202 ILE CA C N S 203 ILE C C N N 204 ILE O O N N 205 ILE CB C N S 206 ILE CG1 C N N 207 ILE CG2 C N N 208 ILE CD1 C N N 209 ILE OXT O N N 210 ILE H H N N 211 ILE H2 H N N 212 ILE HA H N N 213 ILE HB H N N 214 ILE HG12 H N N 215 ILE HG13 H N N 216 ILE HG21 H N N 217 ILE HG22 H N N 218 ILE HG23 H N N 219 ILE HD11 H N N 220 ILE HD12 H N N 221 ILE HD13 H N N 222 ILE HXT H N N 223 LEU N N N N 224 LEU CA C N S 225 LEU C C N N 226 LEU O O N N 227 LEU CB C N N 228 LEU CG C N N 229 LEU CD1 C N N 230 LEU CD2 C N N 231 LEU OXT O N N 232 LEU H H N N 233 LEU H2 H N N 234 LEU HA H N N 235 LEU HB2 H N N 236 LEU HB3 H N N 237 LEU HG H N N 238 LEU HD11 H N N 239 LEU HD12 H N N 240 LEU HD13 H N N 241 LEU HD21 H N N 242 LEU HD22 H N N 243 LEU HD23 H N N 244 LEU HXT H N N 245 LYS N N N N 246 LYS CA C N S 247 LYS C C N N 248 LYS O O N N 249 LYS CB C N N 250 LYS CG C N N 251 LYS CD C N N 252 LYS CE C N N 253 LYS NZ N N N 254 LYS OXT O N N 255 LYS H H N N 256 LYS H2 H N N 257 LYS HA H N N 258 LYS HB2 H N N 259 LYS HB3 H N N 260 LYS HG2 H N N 261 LYS HG3 H N N 262 LYS HD2 H N N 263 LYS HD3 H N N 264 LYS HE2 H N N 265 LYS HE3 H N N 266 LYS HZ1 H N N 267 LYS HZ2 H N N 268 LYS HZ3 H N N 269 LYS HXT H N N 270 MET N N N N 271 MET CA C N S 272 MET C C N N 273 MET O O N N 274 MET CB C N N 275 MET CG C N N 276 MET SD S N N 277 MET CE C N N 278 MET OXT O N N 279 MET H H N N 280 MET H2 H N N 281 MET HA H N N 282 MET HB2 H N N 283 MET HB3 H N N 284 MET HG2 H N N 285 MET HG3 H N N 286 MET HE1 H N N 287 MET HE2 H N N 288 MET HE3 H N N 289 MET HXT H N N 290 NO3 N N N N 291 NO3 O1 O N N 292 NO3 O2 O N N 293 NO3 O3 O N N 294 PD PD PD N N 295 PHE N N N N 296 PHE CA C N S 297 PHE C C N N 298 PHE O O N N 299 PHE CB C N N 300 PHE CG C Y N 301 PHE CD1 C Y N 302 PHE CD2 C Y N 303 PHE CE1 C Y N 304 PHE CE2 C Y N 305 PHE CZ C Y N 306 PHE OXT O N N 307 PHE H H N N 308 PHE H2 H N N 309 PHE HA H N N 310 PHE HB2 H N N 311 PHE HB3 H N N 312 PHE HD1 H N N 313 PHE HD2 H N N 314 PHE HE1 H N N 315 PHE HE2 H N N 316 PHE HZ H N N 317 PHE HXT H N N 318 PRO N N N N 319 PRO CA C N S 320 PRO C C N N 321 PRO O O N N 322 PRO CB C N N 323 PRO CG C N N 324 PRO CD C N N 325 PRO OXT O N N 326 PRO H H N N 327 PRO HA H N N 328 PRO HB2 H N N 329 PRO HB3 H N N 330 PRO HG2 H N N 331 PRO HG3 H N N 332 PRO HD2 H N N 333 PRO HD3 H N N 334 PRO HXT H N N 335 SER N N N N 336 SER CA C N S 337 SER C C N N 338 SER O O N N 339 SER CB C N N 340 SER OG O N N 341 SER OXT O N N 342 SER H H N N 343 SER H2 H N N 344 SER HA H N N 345 SER HB2 H N N 346 SER HB3 H N N 347 SER HG H N N 348 SER HXT H N N 349 SO4 S S N N 350 SO4 O1 O N N 351 SO4 O2 O N N 352 SO4 O3 O N N 353 SO4 O4 O N N 354 THR N N N N 355 THR CA C N S 356 THR C C N N 357 THR O O N N 358 THR CB C N R 359 THR OG1 O N N 360 THR CG2 C N N 361 THR OXT O N N 362 THR H H N N 363 THR H2 H N N 364 THR HA H N N 365 THR HB H N N 366 THR HG1 H N N 367 THR HG21 H N N 368 THR HG22 H N N 369 THR HG23 H N N 370 THR HXT H N N 371 TRP N N N N 372 TRP CA C N S 373 TRP C C N N 374 TRP O O N N 375 TRP CB C N N 376 TRP CG C Y N 377 TRP CD1 C Y N 378 TRP CD2 C Y N 379 TRP NE1 N Y N 380 TRP CE2 C Y N 381 TRP CE3 C Y N 382 TRP CZ2 C Y N 383 TRP CZ3 C Y N 384 TRP CH2 C Y N 385 TRP OXT O N N 386 TRP H H N N 387 TRP H2 H N N 388 TRP HA H N N 389 TRP HB2 H N N 390 TRP HB3 H N N 391 TRP HD1 H N N 392 TRP HE1 H N N 393 TRP HE3 H N N 394 TRP HZ2 H N N 395 TRP HZ3 H N N 396 TRP HH2 H N N 397 TRP HXT H N N 398 TYR N N N N 399 TYR CA C N S 400 TYR C C N N 401 TYR O O N N 402 TYR CB C N N 403 TYR CG C Y N 404 TYR CD1 C Y N 405 TYR CD2 C Y N 406 TYR CE1 C Y N 407 TYR CE2 C Y N 408 TYR CZ C Y N 409 TYR OH O N N 410 TYR OXT O N N 411 TYR H H N N 412 TYR H2 H N N 413 TYR HA H N N 414 TYR HB2 H N N 415 TYR HB3 H N N 416 TYR HD1 H N N 417 TYR HD2 H N N 418 TYR HE1 H N N 419 TYR HE2 H N N 420 TYR HH H N N 421 TYR HXT H N N 422 VAL N N N N 423 VAL CA C N S 424 VAL C C N N 425 VAL O O N N 426 VAL CB C N N 427 VAL CG1 C N N 428 VAL CG2 C N N 429 VAL OXT O N N 430 VAL H H N N 431 VAL H2 H N N 432 VAL HA H N N 433 VAL HB H N N 434 VAL HG11 H N N 435 VAL HG12 H N N 436 VAL HG13 H N N 437 VAL HG21 H N N 438 VAL HG22 H N N 439 VAL HG23 H N N 440 VAL HXT H N N 441 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 F6Q OAU SAV doub N N 83 F6Q SAV OAS doub N N 84 F6Q SAV OAT sing N N 85 F6Q SAV CAP sing N N 86 F6Q CAP CAO sing N N 87 F6Q CAO CAN sing N N 88 F6Q CAN NAM sing N N 89 F6Q NAM CAB sing Y N 90 F6Q NAM CAG sing Y N 91 F6Q CAB CAC doub Y N 92 F6Q CAB CAA sing Y N 93 F6Q CAC CAD sing Y N 94 F6Q CAD CAE doub Y N 95 F6Q CAE CAF sing Y N 96 F6Q CAF CAA doub Y N 97 F6Q CAA NAL sing Y N 98 F6Q NAL CAG doub Y N 99 F6Q NAL PD sing N N 100 F6Q CAG CAH sing N N 101 F6Q CAH NAQ doub Y N 102 F6Q CAH CAR sing Y N 103 F6Q NAQ CAI sing Y N 104 F6Q NAQ PD sing N N 105 F6Q CAI CAK doub Y N 106 F6Q CAK CAJ sing Y N 107 F6Q CAJ CAR doub Y N 108 F6Q CL2 PD sing N N 109 F6Q CAP H1 sing N N 110 F6Q CAP H2 sing N N 111 F6Q CAO H3 sing N N 112 F6Q CAO H4 sing N N 113 F6Q CAN H5 sing N N 114 F6Q CAN H6 sing N N 115 F6Q CAC H7 sing N N 116 F6Q CAD H8 sing N N 117 F6Q CAE H9 sing N N 118 F6Q CAF H10 sing N N 119 F6Q CAI H11 sing N N 120 F6Q CAK H12 sing N N 121 F6Q CAJ H13 sing N N 122 F6Q CAR H14 sing N N 123 F6Q PD CL1 sing N N 124 F6Q OAT H16 sing N N 125 GLN N CA sing N N 126 GLN N H sing N N 127 GLN N H2 sing N N 128 GLN CA C sing N N 129 GLN CA CB sing N N 130 GLN CA HA sing N N 131 GLN C O doub N N 132 GLN C OXT sing N N 133 GLN CB CG sing N N 134 GLN CB HB2 sing N N 135 GLN CB HB3 sing N N 136 GLN CG CD sing N N 137 GLN CG HG2 sing N N 138 GLN CG HG3 sing N N 139 GLN CD OE1 doub N N 140 GLN CD NE2 sing N N 141 GLN NE2 HE21 sing N N 142 GLN NE2 HE22 sing N N 143 GLN OXT HXT sing N N 144 GLU N CA sing N N 145 GLU N H sing N N 146 GLU N H2 sing N N 147 GLU CA C sing N N 148 GLU CA CB sing N N 149 GLU CA HA sing N N 150 GLU C O doub N N 151 GLU C OXT sing N N 152 GLU CB CG sing N N 153 GLU CB HB2 sing N N 154 GLU CB HB3 sing N N 155 GLU CG CD sing N N 156 GLU CG HG2 sing N N 157 GLU CG HG3 sing N N 158 GLU CD OE1 doub N N 159 GLU CD OE2 sing N N 160 GLU OE2 HE2 sing N N 161 GLU OXT HXT sing N N 162 GLY N CA sing N N 163 GLY N H sing N N 164 GLY N H2 sing N N 165 GLY CA C sing N N 166 GLY CA HA2 sing N N 167 GLY CA HA3 sing N N 168 GLY C O doub N N 169 GLY C OXT sing N N 170 GLY OXT HXT sing N N 171 HIS N CA sing N N 172 HIS N H sing N N 173 HIS N H2 sing N N 174 HIS CA C sing N N 175 HIS CA CB sing N N 176 HIS CA HA sing N N 177 HIS C O doub N N 178 HIS C OXT sing N N 179 HIS CB CG sing N N 180 HIS CB HB2 sing N N 181 HIS CB HB3 sing N N 182 HIS CG ND1 sing Y N 183 HIS CG CD2 doub Y N 184 HIS ND1 CE1 doub Y N 185 HIS ND1 HD1 sing N N 186 HIS CD2 NE2 sing Y N 187 HIS CD2 HD2 sing N N 188 HIS CE1 NE2 sing Y N 189 HIS CE1 HE1 sing N N 190 HIS NE2 HE2 sing N N 191 HIS OXT HXT sing N N 192 HOH O H1 sing N N 193 HOH O H2 sing N N 194 ILE N CA sing N N 195 ILE N H sing N N 196 ILE N H2 sing N N 197 ILE CA C sing N N 198 ILE CA CB sing N N 199 ILE CA HA sing N N 200 ILE C O doub N N 201 ILE C OXT sing N N 202 ILE CB CG1 sing N N 203 ILE CB CG2 sing N N 204 ILE CB HB sing N N 205 ILE CG1 CD1 sing N N 206 ILE CG1 HG12 sing N N 207 ILE CG1 HG13 sing N N 208 ILE CG2 HG21 sing N N 209 ILE CG2 HG22 sing N N 210 ILE CG2 HG23 sing N N 211 ILE CD1 HD11 sing N N 212 ILE CD1 HD12 sing N N 213 ILE CD1 HD13 sing N N 214 ILE OXT HXT sing N N 215 LEU N CA sing N N 216 LEU N H sing N N 217 LEU N H2 sing N N 218 LEU CA C sing N N 219 LEU CA CB sing N N 220 LEU CA HA sing N N 221 LEU C O doub N N 222 LEU C OXT sing N N 223 LEU CB CG sing N N 224 LEU CB HB2 sing N N 225 LEU CB HB3 sing N N 226 LEU CG CD1 sing N N 227 LEU CG CD2 sing N N 228 LEU CG HG sing N N 229 LEU CD1 HD11 sing N N 230 LEU CD1 HD12 sing N N 231 LEU CD1 HD13 sing N N 232 LEU CD2 HD21 sing N N 233 LEU CD2 HD22 sing N N 234 LEU CD2 HD23 sing N N 235 LEU OXT HXT sing N N 236 LYS N CA sing N N 237 LYS N H sing N N 238 LYS N H2 sing N N 239 LYS CA C sing N N 240 LYS CA CB sing N N 241 LYS CA HA sing N N 242 LYS C O doub N N 243 LYS C OXT sing N N 244 LYS CB CG sing N N 245 LYS CB HB2 sing N N 246 LYS CB HB3 sing N N 247 LYS CG CD sing N N 248 LYS CG HG2 sing N N 249 LYS CG HG3 sing N N 250 LYS CD CE sing N N 251 LYS CD HD2 sing N N 252 LYS CD HD3 sing N N 253 LYS CE NZ sing N N 254 LYS CE HE2 sing N N 255 LYS CE HE3 sing N N 256 LYS NZ HZ1 sing N N 257 LYS NZ HZ2 sing N N 258 LYS NZ HZ3 sing N N 259 LYS OXT HXT sing N N 260 MET N CA sing N N 261 MET N H sing N N 262 MET N H2 sing N N 263 MET CA C sing N N 264 MET CA CB sing N N 265 MET CA HA sing N N 266 MET C O doub N N 267 MET C OXT sing N N 268 MET CB CG sing N N 269 MET CB HB2 sing N N 270 MET CB HB3 sing N N 271 MET CG SD sing N N 272 MET CG HG2 sing N N 273 MET CG HG3 sing N N 274 MET SD CE sing N N 275 MET CE HE1 sing N N 276 MET CE HE2 sing N N 277 MET CE HE3 sing N N 278 MET OXT HXT sing N N 279 NO3 N O1 doub N N 280 NO3 N O2 sing N N 281 NO3 N O3 sing N N 282 PHE N CA sing N N 283 PHE N H sing N N 284 PHE N H2 sing N N 285 PHE CA C sing N N 286 PHE CA CB sing N N 287 PHE CA HA sing N N 288 PHE C O doub N N 289 PHE C OXT sing N N 290 PHE CB CG sing N N 291 PHE CB HB2 sing N N 292 PHE CB HB3 sing N N 293 PHE CG CD1 doub Y N 294 PHE CG CD2 sing Y N 295 PHE CD1 CE1 sing Y N 296 PHE CD1 HD1 sing N N 297 PHE CD2 CE2 doub Y N 298 PHE CD2 HD2 sing N N 299 PHE CE1 CZ doub Y N 300 PHE CE1 HE1 sing N N 301 PHE CE2 CZ sing Y N 302 PHE CE2 HE2 sing N N 303 PHE CZ HZ sing N N 304 PHE OXT HXT sing N N 305 PRO N CA sing N N 306 PRO N CD sing N N 307 PRO N H sing N N 308 PRO CA C sing N N 309 PRO CA CB sing N N 310 PRO CA HA sing N N 311 PRO C O doub N N 312 PRO C OXT sing N N 313 PRO CB CG sing N N 314 PRO CB HB2 sing N N 315 PRO CB HB3 sing N N 316 PRO CG CD sing N N 317 PRO CG HG2 sing N N 318 PRO CG HG3 sing N N 319 PRO CD HD2 sing N N 320 PRO CD HD3 sing N N 321 PRO OXT HXT sing N N 322 SER N CA sing N N 323 SER N H sing N N 324 SER N H2 sing N N 325 SER CA C sing N N 326 SER CA CB sing N N 327 SER CA HA sing N N 328 SER C O doub N N 329 SER C OXT sing N N 330 SER CB OG sing N N 331 SER CB HB2 sing N N 332 SER CB HB3 sing N N 333 SER OG HG sing N N 334 SER OXT HXT sing N N 335 SO4 S O1 doub N N 336 SO4 S O2 doub N N 337 SO4 S O3 sing N N 338 SO4 S O4 sing N N 339 THR N CA sing N N 340 THR N H sing N N 341 THR N H2 sing N N 342 THR CA C sing N N 343 THR CA CB sing N N 344 THR CA HA sing N N 345 THR C O doub N N 346 THR C OXT sing N N 347 THR CB OG1 sing N N 348 THR CB CG2 sing N N 349 THR CB HB sing N N 350 THR OG1 HG1 sing N N 351 THR CG2 HG21 sing N N 352 THR CG2 HG22 sing N N 353 THR CG2 HG23 sing N N 354 THR OXT HXT sing N N 355 TRP N CA sing N N 356 TRP N H sing N N 357 TRP N H2 sing N N 358 TRP CA C sing N N 359 TRP CA CB sing N N 360 TRP CA HA sing N N 361 TRP C O doub N N 362 TRP C OXT sing N N 363 TRP CB CG sing N N 364 TRP CB HB2 sing N N 365 TRP CB HB3 sing N N 366 TRP CG CD1 doub Y N 367 TRP CG CD2 sing Y N 368 TRP CD1 NE1 sing Y N 369 TRP CD1 HD1 sing N N 370 TRP CD2 CE2 doub Y N 371 TRP CD2 CE3 sing Y N 372 TRP NE1 CE2 sing Y N 373 TRP NE1 HE1 sing N N 374 TRP CE2 CZ2 sing Y N 375 TRP CE3 CZ3 doub Y N 376 TRP CE3 HE3 sing N N 377 TRP CZ2 CH2 doub Y N 378 TRP CZ2 HZ2 sing N N 379 TRP CZ3 CH2 sing Y N 380 TRP CZ3 HZ3 sing N N 381 TRP CH2 HH2 sing N N 382 TRP OXT HXT sing N N 383 TYR N CA sing N N 384 TYR N H sing N N 385 TYR N H2 sing N N 386 TYR CA C sing N N 387 TYR CA CB sing N N 388 TYR CA HA sing N N 389 TYR C O doub N N 390 TYR C OXT sing N N 391 TYR CB CG sing N N 392 TYR CB HB2 sing N N 393 TYR CB HB3 sing N N 394 TYR CG CD1 doub Y N 395 TYR CG CD2 sing Y N 396 TYR CD1 CE1 sing Y N 397 TYR CD1 HD1 sing N N 398 TYR CD2 CE2 doub Y N 399 TYR CD2 HD2 sing N N 400 TYR CE1 CZ doub Y N 401 TYR CE1 HE1 sing N N 402 TYR CE2 CZ sing Y N 403 TYR CE2 HE2 sing N N 404 TYR CZ OH sing N N 405 TYR OH HH sing N N 406 TYR OXT HXT sing N N 407 VAL N CA sing N N 408 VAL N H sing N N 409 VAL N H2 sing N N 410 VAL CA C sing N N 411 VAL CA CB sing N N 412 VAL CA HA sing N N 413 VAL C O doub N N 414 VAL C OXT sing N N 415 VAL CB CG1 sing N N 416 VAL CB CG2 sing N N 417 VAL CB HB sing N N 418 VAL CG1 HG11 sing N N 419 VAL CG1 HG12 sing N N 420 VAL CG1 HG13 sing N N 421 VAL CG2 HG21 sing N N 422 VAL CG2 HG22 sing N N 423 VAL CG2 HG23 sing N N 424 VAL OXT HXT sing N N 425 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1DPX _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6GOB _atom_sites.fract_transf_matrix[1][1] 0.012581 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012581 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026803 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O PD S # loop_