HEADER CHAPERONE 05-JUN-18 6GPH TITLE STRUCTURE OF HUMAN HEAT SHOCK PROTEIN 90-ALPHA N-TERMINAL DOMAIN TITLE 2 (HSP90-NTD) VARIANT K112A IN COMPLEX WITH AMPCP COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAT SHOCK PROTEIN HSP 90-ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HEAT SHOCK 86 KDA,HSP86,LIPOPOLYSACCHARIDE-ASSOCIATED COMPND 5 PROTEIN 2,LPS-ASSOCIATED PROTEIN 2,RENAL CARCINOMA ANTIGEN NY-REN-38; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HSP90AA1, HSP90A, HSPC1, HSPCA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS CHAPERONE, HSP90, NTD, ALPHA, K112A, COMPLEX, AMPCP, NUCLEOTIDE EXPDTA X-RAY DIFFRACTION AUTHOR G.TASSONE,C.POZZI,S.MANGANI,M.BOTTA REVDAT 3 17-JAN-24 6GPH 1 COMPND LINK REVDAT 2 10-OCT-18 6GPH 1 COMPND JRNL REVDAT 1 03-OCT-18 6GPH 0 JRNL AUTH G.TASSONE,S.MANGANI,M.BOTTA,C.POZZI JRNL TITL PROBING THE ROLE OF ARG97 IN HEAT SHOCK PROTEIN 90 JRNL TITL 2 N-TERMINAL DOMAIN FROM THE PARASITE LEISHMANIA BRAZILIENSIS JRNL TITL 3 THROUGH SITE-DIRECTED MUTAGENESIS ON THE HUMAN COUNTERPART. JRNL REF BIOCHIM BIOPHYS ACTA V.1866 1190 2018 JRNL REF 2 PROTEINS PROTEOM JRNL REFN ISSN 1878-1454 JRNL PMID 30248409 JRNL DOI 10.1016/J.BBAPAP.2018.09.005 REMARK 2 REMARK 2 RESOLUTION. 1.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0222 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.56 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.67 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 30562 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1544 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.56 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.60 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2234 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.2430 REMARK 3 BIN FREE R VALUE SET COUNT : 131 REMARK 3 BIN FREE R VALUE : 0.2480 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1813 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.083 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.084 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.055 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.806 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1937 ; 0.016 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2637 ; 2.160 ; 1.662 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 250 ; 6.704 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 95 ;36.731 ;23.789 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 345 ;11.015 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;23.606 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 271 ; 0.140 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1445 ; 0.014 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 967 ; 1.184 ; 1.183 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1219 ; 1.809 ; 1.771 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 970 ; 1.715 ; 1.321 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2894 ; 4.601 ;17.379 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -6 A 226 REMARK 3 ORIGIN FOR THE GROUP (A): 12.0750 0.9871 14.8160 REMARK 3 T TENSOR REMARK 3 T11: 0.0180 T22: 0.0072 REMARK 3 T33: 0.0347 T12: 0.0018 REMARK 3 T13: -0.0235 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.0807 L22: 0.0075 REMARK 3 L33: 0.3917 L12: 0.0047 REMARK 3 L13: 0.0109 L23: 0.0433 REMARK 3 S TENSOR REMARK 3 S11: 0.0053 S12: 0.0233 S13: 0.0090 REMARK 3 S21: 0.0086 S22: -0.0004 S23: -0.0093 REMARK 3 S31: 0.0160 S32: -0.0110 S33: -0.0048 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GPH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1200010355. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976220 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32122 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.560 REMARK 200 RESOLUTION RANGE LOW (A) : 49.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.37700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2XK2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PRECIPITANT: 25 % WT/VOL PEG 2000,2 REMARK 280 200MM MGCL2, 100 MM SODIUM CACODYLATE, PH 6.5 SAMPLE: HSP90A-NTD REMARK 280 K112A 20 MG/ML, 10 MM AMPCP, 500 MM NACL, 20 MM TRIS, PH 7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 21.20000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 ASP A 227 REMARK 465 LYS A 228 REMARK 465 GLU A 229 REMARK 465 VAL A 230 REMARK 465 SER A 231 REMARK 465 ASP A 232 REMARK 465 ASP A 233 REMARK 465 GLU A 234 REMARK 465 ALA A 235 REMARK 465 GLU A 236 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A -6 CG CD1 CD2 REMARK 470 LYS A 69 CG CD CE NZ REMARK 470 LYS A 100 NZ REMARK 470 LYS A 116 NZ REMARK 470 GLU A 178 CD OE1 OE2 REMARK 470 GLU A 192 CG CD OE1 OE2 REMARK 470 LYS A 209 NZ REMARK 470 LYS A 224 CD CE NZ REMARK 470 GLU A 225 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 66 84.53 -156.30 REMARK 500 ALA A 166 -153.15 68.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 51 OD1 REMARK 620 2 A12 A 301 O2B 96.1 REMARK 620 3 A12 A 301 O1A 92.7 91.6 REMARK 620 4 HOH A 447 O 87.0 174.0 93.4 REMARK 620 5 HOH A 472 O 84.8 85.5 175.9 89.7 REMARK 620 6 HOH A 585 O 171.0 91.3 92.2 85.1 90.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 410 O REMARK 620 2 HOH A 434 O 88.4 REMARK 620 3 HOH A 492 O 172.8 98.9 REMARK 620 4 HOH A 497 O 91.7 80.3 89.2 REMARK 620 5 HOH A 522 O 84.7 171.0 88.1 94.2 REMARK 620 6 HOH A 704 O 83.3 91.8 96.7 170.8 93.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue A12 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6GP4 RELATED DB: PDB REMARK 900 STRUCTURE OF HUMAN HEAT SHOCK PROTEIN 90-ALPHA N-TERMINAL DOMAIN REMARK 900 (HSP90-NTD) VARIANT K112A REMARK 900 RELATED ID: 6GP8 RELATED DB: PDB REMARK 900 STRUCTURE OF HUMAN HEAT SHOCK PROTEIN 90-ALPHA N-TERMINAL DOMAIN REMARK 900 (HSP90-NTD) VARIANT K112A IN COMPLEX AMPCPP REMARK 900 RELATED ID: 6GPF RELATED DB: PDB REMARK 900 STRUCTURE OF HUMAN HEAT SHOCK PROTEIN 90-ALPHA N-TERMINAL DOMAIN REMARK 900 (HSP90-NTD) VARIANT K112A IN COMPLEX WITH AMPPNP DBREF 6GPH A 1 236 UNP P07900 HS90A_HUMAN 1 236 SEQADV 6GPH MET A -19 UNP P07900 INITIATING METHIONINE SEQADV 6GPH GLY A -18 UNP P07900 EXPRESSION TAG SEQADV 6GPH SER A -17 UNP P07900 EXPRESSION TAG SEQADV 6GPH SER A -16 UNP P07900 EXPRESSION TAG SEQADV 6GPH HIS A -15 UNP P07900 EXPRESSION TAG SEQADV 6GPH HIS A -14 UNP P07900 EXPRESSION TAG SEQADV 6GPH HIS A -13 UNP P07900 EXPRESSION TAG SEQADV 6GPH HIS A -12 UNP P07900 EXPRESSION TAG SEQADV 6GPH HIS A -11 UNP P07900 EXPRESSION TAG SEQADV 6GPH HIS A -10 UNP P07900 EXPRESSION TAG SEQADV 6GPH SER A -9 UNP P07900 EXPRESSION TAG SEQADV 6GPH SER A -8 UNP P07900 EXPRESSION TAG SEQADV 6GPH GLY A -7 UNP P07900 EXPRESSION TAG SEQADV 6GPH LEU A -6 UNP P07900 EXPRESSION TAG SEQADV 6GPH VAL A -5 UNP P07900 EXPRESSION TAG SEQADV 6GPH PRO A -4 UNP P07900 EXPRESSION TAG SEQADV 6GPH ARG A -3 UNP P07900 EXPRESSION TAG SEQADV 6GPH GLY A -2 UNP P07900 EXPRESSION TAG SEQADV 6GPH SER A -1 UNP P07900 EXPRESSION TAG SEQADV 6GPH HIS A 0 UNP P07900 EXPRESSION TAG SEQADV 6GPH ALA A 112 UNP P07900 LYS 112 ENGINEERED MUTATION SEQRES 1 A 256 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 256 LEU VAL PRO ARG GLY SER HIS MET PRO GLU GLU THR GLN SEQRES 3 A 256 THR GLN ASP GLN PRO MET GLU GLU GLU GLU VAL GLU THR SEQRES 4 A 256 PHE ALA PHE GLN ALA GLU ILE ALA GLN LEU MET SER LEU SEQRES 5 A 256 ILE ILE ASN THR PHE TYR SER ASN LYS GLU ILE PHE LEU SEQRES 6 A 256 ARG GLU LEU ILE SER ASN SER SER ASP ALA LEU ASP LYS SEQRES 7 A 256 ILE ARG TYR GLU SER LEU THR ASP PRO SER LYS LEU ASP SEQRES 8 A 256 SER GLY LYS GLU LEU HIS ILE ASN LEU ILE PRO ASN LYS SEQRES 9 A 256 GLN ASP ARG THR LEU THR ILE VAL ASP THR GLY ILE GLY SEQRES 10 A 256 MET THR LYS ALA ASP LEU ILE ASN ASN LEU GLY THR ILE SEQRES 11 A 256 ALA ALA SER GLY THR LYS ALA PHE MET GLU ALA LEU GLN SEQRES 12 A 256 ALA GLY ALA ASP ILE SER MET ILE GLY GLN PHE GLY VAL SEQRES 13 A 256 GLY PHE TYR SER ALA TYR LEU VAL ALA GLU LYS VAL THR SEQRES 14 A 256 VAL ILE THR LYS HIS ASN ASP ASP GLU GLN TYR ALA TRP SEQRES 15 A 256 GLU SER SER ALA GLY GLY SER PHE THR VAL ARG THR ASP SEQRES 16 A 256 THR GLY GLU PRO MET GLY ARG GLY THR LYS VAL ILE LEU SEQRES 17 A 256 HIS LEU LYS GLU ASP GLN THR GLU TYR LEU GLU GLU ARG SEQRES 18 A 256 ARG ILE LYS GLU ILE VAL LYS LYS HIS SER GLN PHE ILE SEQRES 19 A 256 GLY TYR PRO ILE THR LEU PHE VAL GLU LYS GLU ARG ASP SEQRES 20 A 256 LYS GLU VAL SER ASP ASP GLU ALA GLU HET A12 A 301 27 HET MG A 302 1 HET MG A 303 1 HETNAM A12 PHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER HETNAM MG MAGNESIUM ION HETSYN A12 ALPHA,BETA-METHYLENEADENOSINE-5'-DIPHOSPHATE FORMUL 2 A12 C11 H17 N5 O9 P2 FORMUL 3 MG 2(MG 2+) FORMUL 5 HOH *310(H2 O) HELIX 1 AA1 MET A 1 GLN A 6 1 6 HELIX 2 AA2 GLN A 23 ASN A 35 1 13 HELIX 3 AA3 ASN A 40 GLU A 42 5 3 HELIX 4 AA4 ILE A 43 SER A 63 1 21 HELIX 5 AA5 LEU A 64 THR A 65 5 2 HELIX 6 AA6 ASP A 66 SER A 72 5 7 HELIX 7 AA7 THR A 99 LEU A 107 1 9 HELIX 8 AA8 GLY A 114 ALA A 124 1 11 HELIX 9 AA9 ASP A 127 GLY A 135 5 9 HELIX 10 AB1 VAL A 136 LEU A 143 5 8 HELIX 11 AB2 GLU A 192 LEU A 198 5 7 HELIX 12 AB3 GLU A 199 SER A 211 1 13 SHEET 1 AA1 8 VAL A 17 ALA A 21 0 SHEET 2 AA1 8 SER A 169 THR A 174 -1 O PHE A 170 N PHE A 20 SHEET 3 AA1 8 TYR A 160 SER A 164 -1 N ALA A 161 O ARG A 173 SHEET 4 AA1 8 ALA A 145 LYS A 153 -1 N VAL A 150 O TRP A 162 SHEET 5 AA1 8 GLY A 183 LEU A 190 -1 O ILE A 187 N THR A 149 SHEET 6 AA1 8 THR A 88 ASP A 93 -1 N LEU A 89 O LEU A 188 SHEET 7 AA1 8 ILE A 78 ASN A 83 -1 N ASN A 83 O THR A 88 SHEET 8 AA1 8 ILE A 218 LEU A 220 1 O THR A 219 N LEU A 80 LINK OD1 ASN A 51 MG MG A 302 1555 1555 2.06 LINK O2B A12 A 301 MG MG A 302 1555 1555 2.00 LINK O1A A12 A 301 MG MG A 302 1555 1555 1.91 LINK MG MG A 302 O HOH A 447 1555 1555 2.09 LINK MG MG A 302 O HOH A 472 1555 1555 2.20 LINK MG MG A 302 O HOH A 585 1555 1555 2.19 LINK MG MG A 303 O HOH A 410 1555 1555 2.16 LINK MG MG A 303 O HOH A 434 1555 1555 2.11 LINK MG MG A 303 O HOH A 492 1555 2656 1.89 LINK MG MG A 303 O HOH A 497 1555 1555 2.11 LINK MG MG A 303 O HOH A 522 1555 2555 2.15 LINK MG MG A 303 O HOH A 704 1555 1555 2.10 SITE 1 AC1 27 SER A -1 MET A 1 ASN A 51 ALA A 55 SITE 2 AC1 27 ASP A 93 MET A 98 ASN A 106 LEU A 107 SITE 3 AC1 27 GLY A 135 VAL A 136 GLY A 137 PHE A 138 SITE 4 AC1 27 THR A 184 MG A 302 HOH A 407 HOH A 432 SITE 5 AC1 27 HOH A 447 HOH A 461 HOH A 470 HOH A 472 SITE 6 AC1 27 HOH A 476 HOH A 510 HOH A 529 HOH A 538 SITE 7 AC1 27 HOH A 585 HOH A 598 HOH A 600 SITE 1 AC2 5 ASN A 51 A12 A 301 HOH A 447 HOH A 472 SITE 2 AC2 5 HOH A 585 SITE 1 AC3 4 HOH A 410 HOH A 434 HOH A 497 HOH A 704 CRYST1 54.348 42.400 55.020 90.00 116.54 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018400 0.000000 0.009192 0.00000 SCALE2 0.000000 0.023585 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020317 0.00000