HEADER CELL CYCLE 07-JUN-18 6GQN TITLE CELL DIVISION REGULATOR, S. PNEUMONIAE GPSB, IN COMPLEX WITH PEPTIDE TITLE 2 FRAGMENT OF PENICILLIN BINDING PROTEIN PBP2A COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL CYCLE PROTEIN GPSB; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GUIDING PBP1-SHUTTLING PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: SPPBP2A; COMPND 8 CHAIN: C, G; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE R6; SOURCE 3 ORGANISM_TAXID: 171101; SOURCE 4 GENE: GPSB, SPR0332; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 10 ORGANISM_TAXID: 1313 KEYWDS BACTERIAL CELL DIVISION REGULATOR, PEPTIDOGLYCAN SYNTHESIS REGULATOR, KEYWDS 2 PENICILLIN BINDING PROTEIN INTERACTION PARTNER, PROTEIN-PEPTIDE KEYWDS 3 COMPLEX, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR R.J.LEWIS,Z.J.RUTTER REVDAT 3 17-JAN-24 6GQN 1 LINK REVDAT 2 30-JAN-19 6GQN 1 JRNL REVDAT 1 23-JAN-19 6GQN 0 JRNL AUTH R.M.CLEVERLEY,Z.J.RUTTER,J.RISMONDO,F.CORONA,H.T.TSUI, JRNL AUTH 2 F.A.ALATAWI,R.A.DANIEL,S.HALBEDEL,O.MASSIDDA,M.E.WINKLER, JRNL AUTH 3 R.J.LEWIS JRNL TITL THE CELL CYCLE REGULATOR GPSB FUNCTIONS AS CYTOSOLIC ADAPTOR JRNL TITL 2 FOR MULTIPLE CELL WALL ENZYMES. JRNL REF NAT COMMUN V. 10 261 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 30651563 JRNL DOI 10.1038/S41467-018-08056-2 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 13007 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 657 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.8558 - 3.0776 1.00 2553 147 0.1638 0.2211 REMARK 3 2 3.0776 - 2.4429 1.00 2465 127 0.1844 0.1974 REMARK 3 3 2.4429 - 2.1341 1.00 2474 125 0.1706 0.2389 REMARK 3 4 2.1341 - 1.9390 0.99 2448 131 0.1809 0.2269 REMARK 3 5 1.9390 - 1.8000 0.99 2410 127 0.2458 0.2918 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 1253 REMARK 3 ANGLE : 1.393 1675 REMARK 3 CHIRALITY : 0.074 184 REMARK 3 PLANARITY : 0.009 210 REMARK 3 DIHEDRAL : 18.589 761 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.6037 -2.2039 21.7839 REMARK 3 T TENSOR REMARK 3 T11: 0.1554 T22: 0.1114 REMARK 3 T33: 0.1346 T12: 0.0564 REMARK 3 T13: 0.0101 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 7.2340 L22: 8.8358 REMARK 3 L33: 5.3493 L12: 6.4060 REMARK 3 L13: 3.0194 L23: 1.4161 REMARK 3 S TENSOR REMARK 3 S11: -0.1607 S12: -0.4378 S13: 0.2188 REMARK 3 S21: -0.0691 S22: -0.1199 S23: 0.1439 REMARK 3 S31: -0.4072 S32: -0.4846 S33: 0.2186 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 14 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.3481 -5.7527 7.5476 REMARK 3 T TENSOR REMARK 3 T11: 0.1481 T22: 0.3282 REMARK 3 T33: 0.1776 T12: -0.0257 REMARK 3 T13: -0.0019 T23: 0.0431 REMARK 3 L TENSOR REMARK 3 L11: 7.0712 L22: 7.6140 REMARK 3 L33: 3.7568 L12: 0.7727 REMARK 3 L13: 3.3033 L23: 3.2088 REMARK 3 S TENSOR REMARK 3 S11: 0.0870 S12: 0.4195 S13: 0.3523 REMARK 3 S21: -0.2794 S22: -0.0598 S23: 0.5539 REMARK 3 S31: -0.0338 S32: -0.9676 S33: 0.1142 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.8916 -8.7846 27.0479 REMARK 3 T TENSOR REMARK 3 T11: 0.1320 T22: 0.0652 REMARK 3 T33: 0.1274 T12: 0.0008 REMARK 3 T13: 0.0115 T23: 0.0093 REMARK 3 L TENSOR REMARK 3 L11: 8.4259 L22: 0.4096 REMARK 3 L33: 7.0578 L12: 1.4874 REMARK 3 L13: 7.3740 L23: 1.2593 REMARK 3 S TENSOR REMARK 3 S11: 0.0640 S12: -0.2946 S13: -0.0500 REMARK 3 S21: 0.0740 S22: -0.0414 S23: -0.0619 REMARK 3 S31: 0.0579 S32: -0.2960 S33: -0.0253 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -1 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.3731 -12.6592 11.5228 REMARK 3 T TENSOR REMARK 3 T11: 0.1174 T22: 0.1067 REMARK 3 T33: 0.1219 T12: -0.0056 REMARK 3 T13: 0.0240 T23: -0.0213 REMARK 3 L TENSOR REMARK 3 L11: 3.9995 L22: 4.0344 REMARK 3 L33: 5.2010 L12: -2.0857 REMARK 3 L13: 3.8836 L23: -3.1888 REMARK 3 S TENSOR REMARK 3 S11: 0.2313 S12: 0.3324 S13: -0.2520 REMARK 3 S21: -0.2533 S22: 0.0079 S23: 0.2075 REMARK 3 S31: 0.3156 S32: 0.2936 S33: -0.1478 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 14 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.0169 -10.1723 4.1198 REMARK 3 T TENSOR REMARK 3 T11: 0.1844 T22: 0.2871 REMARK 3 T33: 0.1543 T12: -0.0073 REMARK 3 T13: -0.0365 T23: -0.0122 REMARK 3 L TENSOR REMARK 3 L11: 5.9185 L22: 3.0570 REMARK 3 L33: 3.1279 L12: -0.4573 REMARK 3 L13: 3.0694 L23: 0.0305 REMARK 3 S TENSOR REMARK 3 S11: 0.2190 S12: 0.7727 S13: 0.0613 REMARK 3 S21: -0.2623 S22: -0.1863 S23: 0.1571 REMARK 3 S31: 0.4351 S32: -0.2532 S33: -0.1120 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 25 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6295 -5.7173 20.3373 REMARK 3 T TENSOR REMARK 3 T11: 0.1522 T22: 0.0432 REMARK 3 T33: 0.1325 T12: -0.0151 REMARK 3 T13: 0.0124 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 8.4795 L22: 0.4680 REMARK 3 L33: 6.1823 L12: -1.4571 REMARK 3 L13: 6.5311 L23: -1.0923 REMARK 3 S TENSOR REMARK 3 S11: -0.2075 S12: 0.2687 S13: 0.3179 REMARK 3 S21: 0.0978 S22: -0.0117 S23: -0.1191 REMARK 3 S31: -0.2672 S32: 0.1734 S33: 0.1771 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 27 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0494 -1.4354 2.2018 REMARK 3 T TENSOR REMARK 3 T11: 0.1628 T22: 0.2985 REMARK 3 T33: 0.2024 T12: 0.0003 REMARK 3 T13: 0.0365 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 8.1119 L22: 5.0105 REMARK 3 L33: 4.1963 L12: -5.6772 REMARK 3 L13: 2.0920 L23: 0.3043 REMARK 3 S TENSOR REMARK 3 S11: -0.1736 S12: 0.1036 S13: 0.7741 REMARK 3 S21: -0.1624 S22: 0.1461 S23: -0.4309 REMARK 3 S31: -0.4410 S32: 0.2940 S33: 0.0410 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 36 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.1010 -7.1093 -3.2730 REMARK 3 T TENSOR REMARK 3 T11: 0.2684 T22: 0.3591 REMARK 3 T33: 0.1299 T12: 0.0835 REMARK 3 T13: 0.0588 T23: -0.0301 REMARK 3 L TENSOR REMARK 3 L11: 5.3803 L22: 2.3355 REMARK 3 L33: 8.7095 L12: 2.6391 REMARK 3 L13: -5.7058 L23: -1.1405 REMARK 3 S TENSOR REMARK 3 S11: 0.1213 S12: 0.4275 S13: -0.2164 REMARK 3 S21: -0.3840 S22: -0.0764 S23: -0.1474 REMARK 3 S31: 0.3603 S32: -0.3897 S33: 0.0808 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 28 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.7339 -13.4494 28.0184 REMARK 3 T TENSOR REMARK 3 T11: 0.4359 T22: 0.3631 REMARK 3 T33: 0.6114 T12: -0.0545 REMARK 3 T13: -0.1836 T23: 0.0732 REMARK 3 L TENSOR REMARK 3 L11: 2.9710 L22: 6.7692 REMARK 3 L33: 5.5193 L12: -3.0471 REMARK 3 L13: 1.9129 L23: -5.9139 REMARK 3 S TENSOR REMARK 3 S11: 0.8243 S12: 0.2524 S13: -0.5341 REMARK 3 S21: -0.1930 S22: -0.2852 S23: 0.1408 REMARK 3 S31: 0.0965 S32: 0.3786 S33: -0.5771 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 33 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.7335 -11.7294 20.0439 REMARK 3 T TENSOR REMARK 3 T11: 0.2405 T22: 0.2971 REMARK 3 T33: 0.3151 T12: 0.0611 REMARK 3 T13: 0.0732 T23: 0.0613 REMARK 3 L TENSOR REMARK 3 L11: 5.3193 L22: 4.9877 REMARK 3 L33: 2.4836 L12: 5.0172 REMARK 3 L13: -3.3004 L23: -2.8140 REMARK 3 S TENSOR REMARK 3 S11: -0.4196 S12: -0.4479 S13: -0.9888 REMARK 3 S21: -0.4244 S22: -0.1617 S23: 0.0074 REMARK 3 S31: 0.4638 S32: 0.3659 S33: 0.5648 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GQN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1200010411. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13052 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 39.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6GQA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS.HCL PH 8.5, 0.2M LITHIUM REMARK 280 SULPHATE, 40% PEG400, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 41.54200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 13.18650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 41.54200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 13.18650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -116.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 204 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR G 27 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 21 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 30 CG CD OE1 OE2 REMARK 470 LYS A 47 CD CE NZ REMARK 470 GLU A 58 CD OE1 OE2 REMARK 470 LYS B 47 NZ REMARK 470 ARG B 62 CG CD NE CZ NH1 NH2 REMARK 470 THR C 27 CB OG1 CG2 REMARK 470 ARG G 30 CG CD NE CZ NH1 NH2 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 104 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 52 OE1 REMARK 620 2 GLU A 52 OE2 52.1 REMARK 620 3 LYS A 57 NZ 53.1 44.3 REMARK 620 4 GLU B 52 OE1 53.9 61.7 18.6 REMARK 620 5 GLU B 52 OE2 59.3 56.5 12.2 10.2 REMARK 620 6 LYS B 57 NZ 146.3 103.0 93.4 96.1 88.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI B 104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 101 DBREF 6GQN A 4 63 UNP Q8DR57 GPSB_STRR6 4 63 DBREF 6GQN B 4 63 UNP Q8DR57 GPSB_STRR6 4 63 DBREF 6GQN C 27 40 PDB 6GQN 6GQN 27 40 DBREF 6GQN G 27 40 PDB 6GQN 6GQN 27 40 SEQADV 6GQN GLY A -1 UNP Q8DR57 EXPRESSION TAG SEQADV 6GQN ALA A 0 UNP Q8DR57 EXPRESSION TAG SEQADV 6GQN GLY B -1 UNP Q8DR57 EXPRESSION TAG SEQADV 6GQN ALA B 0 UNP Q8DR57 EXPRESSION TAG SEQRES 1 A 62 GLY ALA ILE ILE PHE SER ALA LYS ASP ILE PHE GLU GLN SEQRES 2 A 62 GLU PHE GLY ARG GLU VAL ARG GLY TYR ASN LYS VAL GLU SEQRES 3 A 62 VAL ASP GLU PHE LEU ASP ASP VAL ILE LYS ASP TYR GLU SEQRES 4 A 62 THR TYR ALA ALA LEU VAL LYS SER LEU ARG GLN GLU ILE SEQRES 5 A 62 ALA ASP LEU LYS GLU GLU LEU THR ARG LYS SEQRES 1 B 62 GLY ALA ILE ILE PHE SER ALA LYS ASP ILE PHE GLU GLN SEQRES 2 B 62 GLU PHE GLY ARG GLU VAL ARG GLY TYR ASN LYS VAL GLU SEQRES 3 B 62 VAL ASP GLU PHE LEU ASP ASP VAL ILE LYS ASP TYR GLU SEQRES 4 B 62 THR TYR ALA ALA LEU VAL LYS SER LEU ARG GLN GLU ILE SEQRES 5 B 62 ALA ASP LEU LYS GLU GLU LEU THR ARG LYS SEQRES 1 C 14 THR ILE LEU ARG ARG SER ARG SER ASP ARG LYS LYS LEU SEQRES 2 C 14 ALA SEQRES 1 G 14 THR ILE LEU ARG ARG SER ARG SER ASP ARG LYS LYS LEU SEQRES 2 G 14 ALA HET SO4 A 101 5 HET SO4 A 102 5 HET SO4 B 101 5 HET SO4 B 102 5 HET SO4 B 103 5 HET NI B 104 1 HET SO4 C 101 5 HETNAM SO4 SULFATE ION HETNAM NI NICKEL (II) ION FORMUL 5 SO4 6(O4 S 2-) FORMUL 10 NI NI 2+ FORMUL 12 HOH *87(H2 O) HELIX 1 AA1 SER A 7 GLN A 14 1 8 HELIX 2 AA2 ASN A 24 THR A 61 1 38 HELIX 3 AA3 SER B 7 GLN B 14 1 8 HELIX 4 AA4 ASN B 24 THR B 61 1 38 HELIX 5 AA5 ASP C 35 LEU C 39 5 5 HELIX 6 AA6 SER G 32 LYS G 37 5 6 SHEET 1 AA1 2 ARG A 21 TYR A 23 0 SHEET 2 AA1 2 ARG B 18 VAL B 20 -1 O GLU B 19 N GLY A 22 LINK OE1 GLU A 52 NI NI B 104 1555 4546 2.80 LINK OE2 GLU A 52 NI NI B 104 1555 4546 1.98 LINK NZ LYS A 57 NI NI B 104 1555 1555 2.08 LINK OE1 GLU B 52 NI NI B 104 1555 1555 2.78 LINK OE2 GLU B 52 NI NI B 104 1555 1555 2.03 LINK NZ LYS B 57 NI NI B 104 1555 4546 1.91 SITE 1 AC1 6 SER A 7 LYS A 9 ASP A 10 HOH A 224 SITE 2 AC1 6 GLU B 58 LYS B 63 SITE 1 AC2 5 SER A 7 ALA A 8 LYS A 9 HOH A 216 SITE 2 AC2 5 ARG G 31 SITE 1 AC3 7 GLN B 14 GLU B 15 PHE B 16 ARG B 18 SITE 2 AC3 7 LYS B 25 ARG C 31 ARG C 36 SITE 1 AC4 3 LYS A 63 SER B 7 ASP B 10 SITE 1 AC5 3 ASN A 24 ARG B 18 LYS B 25 SITE 1 AC6 4 GLU A 52 LYS A 57 GLU B 52 LYS B 57 SITE 1 AC7 5 ARG B 21 ARG C 30 SER C 32 ARG C 33 SITE 2 AC7 5 SER C 34 CRYST1 83.084 26.373 65.899 90.00 106.43 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012036 0.000000 0.003549 0.00000 SCALE2 0.000000 0.037918 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015821 0.00000