HEADER BIOSYNTHETIC PROTEIN 11-JUN-18 6GRG TITLE E. COLI MICROCIN SYNTHETASE MCBBCD COMPLEX WITH PRO-MCCB17, ADP AND TITLE 2 PHOSPHATE BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACTERIOCIN MICROCIN B17; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MCCB17; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: THE MCBA PROTEIN WAS EXPRESSED WITH AN EIGHT-RESIDUE COMPND 7 NICKEL AFFINITY TAG WITH SEQUENCE MGHHHHHH APPENDED TO THE N-TERMINUS COMPND 8 OF THE FULL-LENGTH AMINO ACID SEQUENCE. IT WAS SUBSEQUENTLY POST- COMPND 9 TRANSLATIONALLY MODIFIED BY THE MCBBCD COMPLEX TO YIELD NINE COMPND 10 HETEROCYCLES, WHERE F6N EQUALS OXAZOLE AND IS DERIVED FROM GLY-SER, COMPND 11 F75 EQUALS THIAZOLE AND IS DERIVED FROM GLY-CYS, OTZ EQUALS OXAZOLE- COMPND 12 THIAZOLE AND IS DERIVED FROM GLY-SER-CYS, TOZ EQUALS THIAZOLE-OXAZOLE COMPND 13 AND IS DERIVED FROM GLY-CYS-SER. EACH MONO- OR BIS-HETEROCYCLE (WHERE COMPND 14 PRESENT) WAS TREATED AS A PSEUDO-AMINO ACID FOR REFINEMENT PURPOSES. COMPND 15 THE NUMBERING SYSTEM USED IN THIS PDB FILE RELATES TO THE PROCESSED COMPND 16 PEPTIDE WHERE EACH PSEUDO-AMINO ACID IS TREATED AS A SINGLE RESIDUE COMPND 17 MAKING THE OVERALL SEQUENCE NINE RESIDUES SHORTER.; COMPND 18 MOL_ID: 2; COMPND 19 MOLECULE: MICROCIN B17-PROCESSING PROTEIN MCBB; COMPND 20 CHAIN: 1, 2; COMPND 21 ENGINEERED: YES; COMPND 22 MOL_ID: 3; COMPND 23 MOLECULE: MICROCIN B17-PROCESSING PROTEIN MCBC; COMPND 24 CHAIN: C; COMPND 25 ENGINEERED: YES; COMPND 26 MOL_ID: 4; COMPND 27 MOLECULE: MICROCIN B17-PROCESSING PROTEIN MCBD; COMPND 28 CHAIN: D; COMPND 29 ENGINEERED: YES; COMPND 30 OTHER_DETAILS: THERE IS A T171R SUBSTITUTION RELATIVE TO UNIPROTKB COMPND 31 SEQUENCE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI STR. K-12 SUBSTR. MG1655; SOURCE 3 ORGANISM_TAXID: 511145; SOURCE 4 GENE: MCBA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BW25113; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 679895; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PBAD-MCBABCDEFG; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI STR. K-12 SUBSTR. MG1655; SOURCE 10 ORGANISM_TAXID: 511145; SOURCE 11 GENE: MCBB; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI BW25113; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 679895; SOURCE 14 EXPRESSION_SYSTEM_PLASMID: PBAD-MCBABCDEFG; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI STR. K-12 SUBSTR. MG1655; SOURCE 17 ORGANISM_TAXID: 511145; SOURCE 18 GENE: MCBC; SOURCE 19 EXPRESSION_SYSTEM: ESCHERICHIA COLI BW25113; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 679895; SOURCE 21 EXPRESSION_SYSTEM_PLASMID: PBAD-MCBABCDEFG; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI STR. K-12 SUBSTR. MG1655; SOURCE 24 ORGANISM_TAXID: 511145; SOURCE 25 GENE: MCBD; SOURCE 26 EXPRESSION_SYSTEM: ESCHERICHIA COLI BW25113; SOURCE 27 EXPRESSION_SYSTEM_TAXID: 679895; SOURCE 28 EXPRESSION_SYSTEM_PLASMID: PBAD-MCBABCDEFG KEYWDS MICROCIN, DNA GYRASE, HETEROCYCLIZATION, POSTTRANSLATIONAL KEYWDS 2 MODIFICATION, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.GHILAROV,C.E.M.STEVENSON,D.Y.TRAVIN,J.PISKUNOVA,M.SEREBRYAKOVA, AUTHOR 2 A.MAXWELL,D.M.LAWSON,K.SEVERINOV REVDAT 3 17-JAN-24 6GRG 1 LINK REVDAT 2 06-MAR-19 6GRG 1 JRNL REVDAT 1 30-JAN-19 6GRG 0 JRNL AUTH D.GHILAROV,C.E.M.STEVENSON,D.Y.TRAVIN,J.PISKUNOVA, JRNL AUTH 2 M.SEREBRYAKOVA,A.MAXWELL,D.M.LAWSON,K.SEVERINOV JRNL TITL ARCHITECTURE OF MICROCIN B17 SYNTHETASE: AN OCTAMERIC JRNL TITL 2 PROTEIN COMPLEX CONVERTING A RIBOSOMALLY SYNTHESIZED PEPTIDE JRNL TITL 3 INTO A DNA GYRASE POISON. JRNL REF MOL. CELL V. 73 749 2019 JRNL REFN ISSN 1097-4164 JRNL PMID 30661981 JRNL DOI 10.1016/J.MOLCEL.2018.11.032 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 86.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 51049 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2683 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9924 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 119 REMARK 3 SOLVENT ATOMS : 226 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.84000 REMARK 3 B22 (A**2) : 1.34000 REMARK 3 B33 (A**2) : -0.53000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.46000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.407 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.243 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.225 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.463 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6GRG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1200010440. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.17 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53732 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 86.760 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.41 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : 1.64100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 6GOS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 90.32000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.64000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 90.32000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 41.64000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 55940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 86020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -396.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, 1, 2, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 359.11410 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 86.76297 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 GLY A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 LEU A 3 REMARK 465 LYS A 4 REMARK 465 GLN A 22 REMARK 465 SER A 23 REMARK 465 PRO A 24 REMARK 465 LEU A 25 REMARK 465 GLY A 26 REMARK 465 VAL A 27 REMARK 465 GLY A 28 REMARK 465 ILE A 29 REMARK 465 GLY A 30 REMARK 465 GLY A 31 REMARK 465 GLY A 32 REMARK 465 GLY A 33 REMARK 465 GLY A 34 REMARK 465 GLY A 35 REMARK 465 GLY A 36 REMARK 465 GLY A 37 REMARK 465 GLY A 38 REMARK 465 OTZ A 39 REMARK 465 GLY A 40 REMARK 465 GLY A 41 REMARK 465 GLN A 42 REMARK 465 GLY A 43 REMARK 465 GLY A 44 REMARK 465 F75 A 45 REMARK 465 GLY A 46 REMARK 465 TOZ A 47 REMARK 465 ASN A 48 REMARK 465 TOZ A 49 REMARK 465 GLY A 50 REMARK 465 GLY A 51 REMARK 465 ASN A 52 REMARK 465 GLY A 53 REMARK 465 F6N A 54 REMARK 465 GLY A 55 REMARK 465 ILE A 60 REMARK 465 MET 1 1 REMARK 465 VAL 1 2 REMARK 465 LEU 1 3 REMARK 465 PRO 1 4 REMARK 465 ASP 1 5 REMARK 465 ILE 1 6 REMARK 465 LYS 1 7 REMARK 465 LYS 1 8 REMARK 465 GLY 1 9 REMARK 465 LYS 1 10 REMARK 465 ASP 1 11 REMARK 465 MET 2 1 REMARK 465 VAL 2 2 REMARK 465 LEU 2 3 REMARK 465 PRO 2 4 REMARK 465 ASP 2 5 REMARK 465 ILE 2 6 REMARK 465 LYS 2 7 REMARK 465 LYS 2 8 REMARK 465 GLY 2 9 REMARK 465 LYS 2 10 REMARK 465 ASP 2 11 REMARK 465 MET 2 12 REMARK 465 ARG 2 295 REMARK 465 MET C 1 REMARK 465 ASP C 267 REMARK 465 ASP C 268 REMARK 465 LYS C 269 REMARK 465 CYS C 270 REMARK 465 LEU C 271 REMARK 465 GLN C 272 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 59 CG ND1 CD2 CE1 NE2 REMARK 470 ASN 1 24 CG OD1 ND2 REMARK 470 LYS 1 26 CG CD CE NZ REMARK 470 LYS 1 88 CE NZ REMARK 470 SER 1 92 OG REMARK 470 GLU 1 205 CD OE1 OE2 REMARK 470 LYS 1 206 CG CD CE NZ REMARK 470 SER 1 207 OG REMARK 470 ARG 1 209 CD NE CZ NH1 NH2 REMARK 470 ASN 2 24 CG OD1 ND2 REMARK 470 LYS 2 44 CG CD CE NZ REMARK 470 LYS 2 45 CD CE NZ REMARK 470 GLN 2 54 CG CD OE1 NE2 REMARK 470 LYS 2 64 CG CD CE NZ REMARK 470 LYS 2 73 CG CD CE NZ REMARK 470 LYS 2 129 CE NZ REMARK 470 ARG 2 210 NE CZ NH1 NH2 REMARK 470 LYS 2 224 CG CD CE NZ REMARK 470 LYS 2 260 CG CD CE NZ REMARK 470 LYS 2 281 CE NZ REMARK 470 LEU C 49 CG CD1 CD2 REMARK 470 ARG C 80 CD NE CZ NH1 NH2 REMARK 470 LYS C 94 CE NZ REMARK 470 ASN C 266 CG OD1 ND2 REMARK 470 LYS D 49 CD CE NZ REMARK 470 LYS D 235 CE NZ REMARK 470 ASP D 280 CG OD1 OD2 REMARK 470 LEU D 309 CG CD1 CD2 REMARK 470 ASP D 311 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN 1 131 ND2 ASN 1 131 2757 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN 1 24 -122.58 46.31 REMARK 500 HIS 1 40 118.77 -165.12 REMARK 500 GLN 1 54 174.88 77.56 REMARK 500 ASN 1 97 148.11 -178.13 REMARK 500 LYS 1 175 -106.09 67.09 REMARK 500 ASN 1 265 12.69 -147.05 REMARK 500 ARG 2 23 139.92 -173.36 REMARK 500 ASN 2 24 -144.61 50.28 REMARK 500 ILE 2 56 126.50 -36.62 REMARK 500 LYS 2 88 77.89 -104.85 REMARK 500 SER 2 136 156.06 -45.33 REMARK 500 LYS 2 175 -115.31 57.45 REMARK 500 LEU 2 293 32.70 -84.64 REMARK 500 ASN C 88 87.46 12.59 REMARK 500 GLN C 157 64.60 60.39 REMARK 500 ARG C 203 -141.20 61.21 REMARK 500 ILE D 2 -73.64 69.94 REMARK 500 TYR D 35 -127.78 59.24 REMARK 500 TYR D 143 70.58 -166.58 REMARK 500 LEU D 218 124.82 -39.60 REMARK 500 ASP D 311 -82.21 -57.12 REMARK 500 LEU D 317 40.55 -105.04 REMARK 500 SER D 348 -119.01 52.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY D 72 GLN D 73 -142.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG 1 23 0.09 SIDE CHAIN REMARK 500 ARG 1 51 0.08 SIDE CHAIN REMARK 500 ARG 1 112 0.10 SIDE CHAIN REMARK 500 ARG C 205 0.10 SIDE CHAIN REMARK 500 ARG D 100 0.08 SIDE CHAIN REMARK 500 ARG D 206 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN 1 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS 1 192 SG REMARK 620 2 CYS 1 195 SG 124.7 REMARK 620 3 CYS 1 290 SG 98.7 108.3 REMARK 620 4 CYS 1 292 SG 107.1 105.1 113.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN 2 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS 2 192 SG REMARK 620 2 CYS 2 195 SG 124.0 REMARK 620 3 CYS 2 290 SG 103.9 107.7 REMARK 620 4 CYS 2 292 SG 115.3 97.1 107.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 706 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 57 OE1 REMARK 620 2 ADP D 702 O3B 87.6 REMARK 620 3 PO4 D 703 O3 77.7 90.8 REMARK 620 4 HOH D 808 O 92.5 89.2 170.3 REMARK 620 5 HOH D 809 O 72.8 159.4 91.0 85.6 REMARK 620 6 HOH D 818 O 157.0 115.3 99.6 89.2 84.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 705 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 167 OE1 REMARK 620 2 ADP D 702 O2B 95.9 REMARK 620 3 PO4 D 703 O4 77.5 94.8 REMARK 620 4 HOH D 813 O 160.3 87.3 82.9 REMARK 620 5 HOH D 817 O 91.8 86.4 169.2 107.9 REMARK 620 6 HOH D 822 O 82.1 172.2 77.4 92.1 101.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 704 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 261 OE2 REMARK 620 2 ADP D 702 O1B 78.4 REMARK 620 3 PO4 D 703 O1 76.0 79.6 REMARK 620 4 HOH D 803 O 90.3 167.8 93.4 REMARK 620 5 HOH D 804 O 78.2 85.5 152.3 96.7 REMARK 620 6 HOH D 811 O 175.2 99.9 99.4 91.0 106.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN 1 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 1 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL 1 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN 2 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP 2 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO 2 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP D 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 D 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL D 707 DBREF 6GRG A 1 60 UNP P05834 MCBA_ECOLX 1 69 DBREF 6GRG 1 1 295 UNP P23184 MCBB_ECOLX 1 295 DBREF 6GRG 2 1 295 UNP P23184 MCBB_ECOLX 1 295 DBREF 6GRG C 1 272 UNP P23185 MCBC_ECOLX 1 272 DBREF 6GRG D 1 396 UNP P23186 MCBD_ECOLX 1 396 SEQADV 6GRG MET A -7 UNP P05834 INITIATING METHIONINE SEQADV 6GRG GLY A -6 UNP P05834 EXPRESSION TAG SEQADV 6GRG HIS A -5 UNP P05834 EXPRESSION TAG SEQADV 6GRG HIS A -4 UNP P05834 EXPRESSION TAG SEQADV 6GRG HIS A -3 UNP P05834 EXPRESSION TAG SEQADV 6GRG HIS A -2 UNP P05834 EXPRESSION TAG SEQADV 6GRG HIS A -1 UNP P05834 EXPRESSION TAG SEQADV 6GRG HIS A 0 UNP P05834 EXPRESSION TAG SEQADV 6GRG OTZ A 39 UNP P05834 GLY 39 MODIFIED RESIDUE SEQADV 6GRG OTZ A 39 UNP P05834 SER 40 MODIFIED RESIDUE SEQADV 6GRG OTZ A 39 UNP P05834 CYS 41 MODIFIED RESIDUE SEQADV 6GRG F75 A 45 UNP P05834 GLY 47 MODIFIED RESIDUE SEQADV 6GRG F75 A 45 UNP P05834 CYS 48 MODIFIED RESIDUE SEQADV 6GRG TOZ A 47 UNP P05834 GLY 50 MODIFIED RESIDUE SEQADV 6GRG TOZ A 47 UNP P05834 CYS 51 MODIFIED RESIDUE SEQADV 6GRG TOZ A 47 UNP P05834 SER 52 MODIFIED RESIDUE SEQADV 6GRG TOZ A 49 UNP P05834 GLY 54 MODIFIED RESIDUE SEQADV 6GRG TOZ A 49 UNP P05834 CYS 55 MODIFIED RESIDUE SEQADV 6GRG TOZ A 49 UNP P05834 SER 56 MODIFIED RESIDUE SEQADV 6GRG F6N A 54 UNP P05834 GLY 61 MODIFIED RESIDUE SEQADV 6GRG F6N A 54 UNP P05834 SER 62 MODIFIED RESIDUE SEQADV 6GRG F6N A 56 UNP P05834 GLY 64 MODIFIED RESIDUE SEQADV 6GRG F6N A 56 UNP P05834 SER 65 MODIFIED RESIDUE SEQADV 6GRG ARG D 171 UNP P23186 THR 171 CONFLICT SEQRES 1 A 68 MET GLY HIS HIS HIS HIS HIS HIS MET GLU LEU LYS ALA SEQRES 2 A 68 SER GLU PHE GLY VAL VAL LEU SER VAL ASP ALA LEU LYS SEQRES 3 A 68 LEU SER ARG GLN SER PRO LEU GLY VAL GLY ILE GLY GLY SEQRES 4 A 68 GLY GLY GLY GLY GLY GLY GLY OTZ GLY GLY GLN GLY GLY SEQRES 5 A 68 F75 GLY TOZ ASN TOZ GLY GLY ASN GLY F6N GLY F6N GLY SEQRES 6 A 68 SER HIS ILE SEQRES 1 1 295 MET VAL LEU PRO ASP ILE LYS LYS GLY LYS ASP MET ILE SEQRES 2 1 295 ASN ILE LEU PRO PHE GLU ILE ILE SER ARG ASN THR LYS SEQRES 3 1 295 THR LEU LEU ILE THR TYR ILE SER SER VAL ASP ILE THR SEQRES 4 1 295 HIS GLU GLY MET LYS LYS VAL LEU GLU SER LEU ARG SER SEQRES 5 1 295 LYS GLN GLY ILE ILE SER GLU TYR LEU LEU ASP LYS LEU SEQRES 6 1 295 LEU ASP GLU SER LEU ILE ASP LYS ASP LYS GLY LYS GLU SEQRES 7 1 295 PHE LEU ILE THR THR GLY VAL ILE ASN LYS THR LYS THR SEQRES 8 1 295 SER PRO LEU TRP VAL ASN SER VAL ILE ILE SER ASP VAL SEQRES 9 1 295 PRO HIS LEU PHE SER ASN ALA ARG GLU GLN TRP LYS CYS SEQRES 10 1 295 ASP GLY VAL PHE VAL SER HIS ILE ILE ASP ILE LYS ASP SEQRES 11 1 295 ASN ASN ILE ASN VAL SER ASP SER THR LEU ILE TRP LEU SEQRES 12 1 295 HIS LEU GLU ASN TYR HIS SER ASP ILE VAL LYS ARG ILE SEQRES 13 1 295 TYR SER LYS PHE GLU SER ASN PRO GLY VAL ALA PHE ILE SEQRES 14 1 295 GLN SER TYR TYR LEU LYS GLU SER PHE ARG ILE ASP GLY SEQRES 15 1 295 VAL TYR SER PRO ASP LEU GLY THR PRO CYS HIS PHE CYS SEQRES 16 1 295 HIS ILE GLU ARG TRP LEU SER ARG GLU GLU LYS SER PHE SEQRES 17 1 295 ARG ARG ASN GLU MET SER TRP ALA ASN LEU LEU GLN LEU SEQRES 18 1 295 LEU LYS LYS TYR GLN MET THR LEU PRO ALA LEU ALA LEU SEQRES 19 1 295 GLY GLU SER GLU ARG GLY PHE SER TYR HIS LEU ILE LYS SEQRES 20 1 295 ARG ARG LEU GLN GLU LEU THR GLY THR SER LEU VAL LYS SEQRES 21 1 295 SER HIS VAL ASP ASN PHE MET SER SER VAL SER ALA ASP SEQRES 22 1 295 LEU ILE THR CYS ILE LEU CYS LYS GLU PRO VAL ILE HIS SEQRES 23 1 295 TRP GLN ALA CYS SER CYS LEU GLU ARG SEQRES 1 2 295 MET VAL LEU PRO ASP ILE LYS LYS GLY LYS ASP MET ILE SEQRES 2 2 295 ASN ILE LEU PRO PHE GLU ILE ILE SER ARG ASN THR LYS SEQRES 3 2 295 THR LEU LEU ILE THR TYR ILE SER SER VAL ASP ILE THR SEQRES 4 2 295 HIS GLU GLY MET LYS LYS VAL LEU GLU SER LEU ARG SER SEQRES 5 2 295 LYS GLN GLY ILE ILE SER GLU TYR LEU LEU ASP LYS LEU SEQRES 6 2 295 LEU ASP GLU SER LEU ILE ASP LYS ASP LYS GLY LYS GLU SEQRES 7 2 295 PHE LEU ILE THR THR GLY VAL ILE ASN LYS THR LYS THR SEQRES 8 2 295 SER PRO LEU TRP VAL ASN SER VAL ILE ILE SER ASP VAL SEQRES 9 2 295 PRO HIS LEU PHE SER ASN ALA ARG GLU GLN TRP LYS CYS SEQRES 10 2 295 ASP GLY VAL PHE VAL SER HIS ILE ILE ASP ILE LYS ASP SEQRES 11 2 295 ASN ASN ILE ASN VAL SER ASP SER THR LEU ILE TRP LEU SEQRES 12 2 295 HIS LEU GLU ASN TYR HIS SER ASP ILE VAL LYS ARG ILE SEQRES 13 2 295 TYR SER LYS PHE GLU SER ASN PRO GLY VAL ALA PHE ILE SEQRES 14 2 295 GLN SER TYR TYR LEU LYS GLU SER PHE ARG ILE ASP GLY SEQRES 15 2 295 VAL TYR SER PRO ASP LEU GLY THR PRO CYS HIS PHE CYS SEQRES 16 2 295 HIS ILE GLU ARG TRP LEU SER ARG GLU GLU LYS SER PHE SEQRES 17 2 295 ARG ARG ASN GLU MET SER TRP ALA ASN LEU LEU GLN LEU SEQRES 18 2 295 LEU LYS LYS TYR GLN MET THR LEU PRO ALA LEU ALA LEU SEQRES 19 2 295 GLY GLU SER GLU ARG GLY PHE SER TYR HIS LEU ILE LYS SEQRES 20 2 295 ARG ARG LEU GLN GLU LEU THR GLY THR SER LEU VAL LYS SEQRES 21 2 295 SER HIS VAL ASP ASN PHE MET SER SER VAL SER ALA ASP SEQRES 22 2 295 LEU ILE THR CYS ILE LEU CYS LYS GLU PRO VAL ILE HIS SEQRES 23 2 295 TRP GLN ALA CYS SER CYS LEU GLU ARG SEQRES 1 C 272 MET SER LYS HIS GLU LEU SER LEU VAL GLU VAL THR HIS SEQRES 2 C 272 TYR THR ASP PRO GLU VAL LEU ALA ILE VAL LYS ASP PHE SEQRES 3 C 272 HIS VAL ARG GLY ASN PHE ALA SER LEU PRO GLU PHE ALA SEQRES 4 C 272 GLU ARG THR PHE VAL SER ALA VAL PRO LEU ALA HIS LEU SEQRES 5 C 272 GLU LYS PHE GLU ASN LYS GLU VAL LEU PHE ARG PRO GLY SEQRES 6 C 272 PHE SER SER VAL ILE ASN ILE SER SER SER HIS ASN PHE SEQRES 7 C 272 SER ARG GLU ARG LEU PRO SER GLY ILE ASN PHE CYS ASP SEQRES 8 C 272 LYS ASN LYS LEU SER ILE ARG THR ILE GLU LYS LEU LEU SEQRES 9 C 272 VAL ASN ALA PHE SER SER PRO ASP PRO GLY SER VAL ARG SEQRES 10 C 272 ARG PRO TYR PRO SER GLY GLY ALA LEU TYR PRO ILE GLU SEQRES 11 C 272 VAL PHE LEU CYS ARG LEU SER GLU ASN THR GLU ASN TRP SEQRES 12 C 272 GLN ALA GLY THR ASN VAL TYR HIS TYR LEU PRO LEU SER SEQRES 13 C 272 GLN ALA LEU GLU PRO VAL ALA THR CYS ASN THR GLN SER SEQRES 14 C 272 LEU TYR ARG SER LEU SER GLY GLY ASP SER GLU ARG LEU SEQRES 15 C 272 GLY LYS PRO HIS PHE ALA LEU VAL TYR CYS ILE ILE PHE SEQRES 16 C 272 GLU LYS ALA LEU PHE LYS TYR ARG TYR ARG GLY TYR ARG SEQRES 17 C 272 MET ALA LEU MET GLU THR GLY SER MET TYR GLN ASN ALA SEQRES 18 C 272 VAL LEU VAL ALA ASP GLN ILE GLY LEU LYS ASN ARG VAL SEQRES 19 C 272 TRP ALA GLY TYR THR ASP SER TYR VAL ALA LYS THR MET SEQRES 20 C 272 ASN LEU ASP GLN ARG THR VAL ALA PRO LEU ILE VAL GLN SEQRES 21 C 272 PHE PHE GLY ASP VAL ASN ASP ASP LYS CYS LEU GLN SEQRES 1 D 396 MET ILE ASN VAL TYR SER ASN LEU MET SER ALA TRP PRO SEQRES 2 D 396 ALA THR MET ALA MET SER PRO LYS LEU ASN ARG ASN MET SEQRES 3 D 396 PRO THR PHE SER GLN ILE TRP ASP TYR GLU ARG ILE THR SEQRES 4 D 396 PRO ALA SER ALA ALA GLY GLU THR LEU LYS SER ILE GLN SEQRES 5 D 396 GLY ALA ILE GLY GLU TYR PHE GLU ARG ARG HIS PHE PHE SEQRES 6 D 396 ASN GLU ILE VAL THR GLY GLY GLN LYS THR LEU TYR GLU SEQRES 7 D 396 MET MET PRO PRO SER ALA ALA LYS ALA PHE THR GLU ALA SEQRES 8 D 396 PHE PHE GLN ILE SER SER LEU THR ARG ASP GLU ILE ILE SEQRES 9 D 396 THR HIS LYS PHE LYS THR VAL ARG ALA PHE ASN LEU PHE SEQRES 10 D 396 SER LEU GLU GLN GLN GLU ILE PRO ALA VAL ILE ILE ALA SEQRES 11 D 396 LEU ASP ASN ILE THR ALA ALA ASP ASP LEU LYS PHE TYR SEQRES 12 D 396 PRO ASP ARG ASP THR CYS GLY CYS SER PHE HIS GLY SER SEQRES 13 D 396 LEU ASN ASP ALA ILE GLU GLY SER LEU CYS GLU PHE MET SEQRES 14 D 396 GLU ARG GLN SER LEU LEU LEU TYR TRP LEU GLN GLY LYS SEQRES 15 D 396 ALA ASN THR GLU ILE SER SER GLU ILE VAL THR GLY ILE SEQRES 16 D 396 ASN HIS ILE ASP GLU ILE LEU LEU ALA LEU ARG SER GLU SEQRES 17 D 396 GLY ASP ILE ARG ILE PHE ASP ILE THR LEU PRO GLY ALA SEQRES 18 D 396 PRO GLY HIS ALA VAL LEU THR LEU TYR GLY THR LYS ASN SEQRES 19 D 396 LYS ILE SER ARG ILE LYS TYR SER THR GLY LEU SER TYR SEQRES 20 D 396 ALA ASN SER LEU LYS LYS ALA LEU CYS LYS SER VAL VAL SEQRES 21 D 396 GLU LEU TRP GLN SER TYR ILE CYS LEU HIS ASN PHE LEU SEQRES 22 D 396 ILE GLY GLY TYR THR ASP ASP ASP ILE ILE ASP SER TYR SEQRES 23 D 396 GLN ARG HIS PHE MET SER CYS ASN LYS TYR GLU SER PHE SEQRES 24 D 396 THR ASP LEU CYS GLU ASN THR VAL LEU LEU SER ASP ASP SEQRES 25 D 396 VAL LYS LEU THR LEU GLU GLU ASN ILE THR SER ASP THR SEQRES 26 D 396 ASN LEU LEU ASN TYR LEU GLN GLN ILE SER ASP ASN ILE SEQRES 27 D 396 PHE VAL TYR TYR ALA ARG GLU ARG VAL SER ASN SER LEU SEQRES 28 D 396 VAL TRP TYR THR LYS ILE VAL SER PRO ASP PHE PHE LEU SEQRES 29 D 396 HIS MET ASN ASN SER GLY ALA ILE ASN ILE ASN ASN LYS SEQRES 30 D 396 ILE TYR HIS THR GLY ASP GLY ILE LYS VAL ARG GLU SER SEQRES 31 D 396 LYS MET VAL PRO PHE PRO HET F6N A 56 9 HET FMN A 401 31 HET ZN 1 401 1 HET SO4 1 402 5 HET GOL 1 403 6 HET ZN 2 401 1 HET ATP 2 402 31 HET EDO 2 403 4 HET EDO D 701 4 HET ADP D 702 27 HET PO4 D 703 5 HET MG D 704 1 HET MG D 705 1 HET MG D 706 1 HET CL D 707 1 HETNAM F6N 2-(AMINOMETHYL)-1,3-OXAZOLE-4-CARBOXYLIC ACID HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM PO4 PHOSPHATE ION HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 F6N C5 H6 N2 O3 FORMUL 6 FMN C17 H21 N4 O9 P FORMUL 7 ZN 2(ZN 2+) FORMUL 8 SO4 O4 S 2- FORMUL 9 GOL C3 H8 O3 FORMUL 11 ATP C10 H16 N5 O13 P3 FORMUL 12 EDO 2(C2 H6 O2) FORMUL 14 ADP C10 H15 N5 O10 P2 FORMUL 15 PO4 O4 P 3- FORMUL 16 MG 3(MG 2+) FORMUL 19 CL CL 1- FORMUL 20 HOH *226(H2 O) HELIX 1 AA1 ASP A 15 ARG A 21 1 7 HELIX 2 AA2 HIS 1 40 LYS 1 53 1 14 HELIX 3 AA3 SER 1 58 SER 1 69 1 12 HELIX 4 AA4 ASP 1 72 THR 1 83 1 12 HELIX 5 AA5 VAL 1 104 SER 1 109 5 6 HELIX 6 AA6 ASN 1 110 TRP 1 115 1 6 HELIX 7 AA7 LYS 1 116 GLY 1 119 5 4 HELIX 8 AA8 HIS 1 149 GLU 1 161 1 13 HELIX 9 AA9 CYS 1 192 GLU 1 205 1 14 HELIX 10 AB1 SER 1 214 LEU 1 221 1 8 HELIX 11 AB2 GLY 1 235 GLY 1 255 1 21 HELIX 12 AB3 HIS 2 40 LYS 2 53 1 14 HELIX 13 AB4 SER 2 58 SER 2 69 1 12 HELIX 14 AB5 ASP 2 72 THR 2 83 1 12 HELIX 15 AB6 VAL 2 104 SER 2 109 5 6 HELIX 16 AB7 ASN 2 110 LYS 2 116 1 7 HELIX 17 AB8 CYS 2 117 GLY 2 119 5 3 HELIX 18 AB9 HIS 2 149 GLU 2 161 1 13 HELIX 19 AC1 HIS 2 193 LYS 2 206 1 14 HELIX 20 AC2 TRP 2 215 TYR 2 225 1 11 HELIX 21 AC3 GLY 2 235 LEU 2 253 1 19 HELIX 22 AC4 HIS 2 262 PHE 2 266 5 5 HELIX 23 AC5 CYS 2 290 GLU 2 294 5 5 HELIX 24 AC6 SER C 7 HIS C 13 1 7 HELIX 25 AC7 ASP C 16 GLY C 30 1 15 HELIX 26 AC8 LEU C 35 ALA C 39 5 5 HELIX 27 AC9 PRO C 48 GLU C 56 5 9 HELIX 28 AD1 SER C 73 ASN C 77 5 5 HELIX 29 AD2 SER C 96 SER C 109 1 14 HELIX 30 AD3 SER C 122 LEU C 126 5 5 HELIX 31 AD4 ASN C 166 SER C 175 1 10 HELIX 32 AD5 ASP C 178 GLY C 183 1 6 HELIX 33 AD6 PHE C 195 PHE C 200 1 6 HELIX 34 AD7 TYR C 204 GLY C 229 1 26 HELIX 35 AD8 THR C 239 MET C 247 1 9 HELIX 36 AD9 GLU D 46 GLU D 67 1 22 HELIX 37 AE1 THR D 75 MET D 80 1 6 HELIX 38 AE2 PRO D 81 SER D 96 1 16 HELIX 39 AE3 THR D 99 HIS D 106 1 8 HELIX 40 AE4 VAL D 127 ILE D 129 5 3 HELIX 41 AE5 ALA D 136 TYR D 143 5 8 HELIX 42 AE6 SER D 156 GLY D 181 1 26 HELIX 43 AE7 ILE D 195 GLY D 209 1 15 HELIX 44 AE8 SER D 250 GLY D 276 1 27 HELIX 45 AE9 THR D 278 ILE D 282 5 5 HELIX 46 AF1 ASP D 284 CYS D 293 1 10 HELIX 47 AF2 LYS D 295 ASN D 305 1 11 HELIX 48 AF3 ASN D 326 SER D 335 1 10 HELIX 49 AF4 LYS D 386 LYS D 391 5 6 SHEET 1 AA1 4 GLY A 9 VAL A 14 0 SHEET 2 AA1 4 SER 1 34 ILE 1 38 -1 O ASP 1 37 N VAL A 10 SHEET 3 AA1 4 LYS 1 26 THR 1 31 -1 N THR 1 31 O SER 1 34 SHEET 4 AA1 4 PHE 1 18 ARG 1 23 -1 N ILE 1 21 O LEU 1 28 SHEET 1 AA2 3 ILE 1 56 ILE 1 57 0 SHEET 2 AA2 3 ILE 1 13 ILE 1 15 -1 N ILE 1 13 O ILE 1 57 SHEET 3 AA2 3 ILE 1 86 LYS 1 88 -1 O ASN 1 87 N ASN 1 14 SHEET 1 AA3 7 VAL 1 122 ASP 1 127 0 SHEET 2 AA3 7 ASN 1 97 SER 1 102 1 N ILE 1 100 O ILE 1 126 SHEET 3 AA3 7 THR 1 139 HIS 1 144 1 O TRP 1 142 N ILE 1 101 SHEET 4 AA3 7 ALA 1 167 LEU 1 174 1 O ALA 1 167 N ILE 1 141 SHEET 5 AA3 7 SER 1 177 ILE 1 180 -1 O ARG 1 179 N TYR 1 172 SHEET 6 AA3 7 SER 1 269 ASP 1 273 -1 O ALA 1 272 N PHE 1 178 SHEET 7 AA3 7 LEU 1 279 GLU 1 282 -1 O CYS 1 280 N SER 1 271 SHEET 1 AA4 2 ASN 2 14 ILE 2 15 0 SHEET 2 AA4 2 ILE 2 86 ASN 2 87 -1 O ASN 2 87 N ASN 2 14 SHEET 1 AA5 3 GLU 2 19 ARG 2 23 0 SHEET 2 AA5 3 LYS 2 26 ILE 2 30 -1 O ILE 2 30 N GLU 2 19 SHEET 3 AA5 3 SER 2 35 ASP 2 37 -1 O VAL 2 36 N LEU 2 29 SHEET 1 AA6 7 HIS 2 124 ASP 2 127 0 SHEET 2 AA6 7 ASN 2 97 SER 2 102 1 N SER 2 102 O ILE 2 126 SHEET 3 AA6 7 THR 2 139 HIS 2 144 1 O TRP 2 142 N VAL 2 99 SHEET 4 AA6 7 ALA 2 167 LEU 2 174 1 O SER 2 171 N LEU 2 143 SHEET 5 AA6 7 SER 2 177 ILE 2 180 -1 O ARG 2 179 N TYR 2 172 SHEET 6 AA6 7 SER 2 268 ASP 2 273 -1 O VAL 2 270 N ILE 2 180 SHEET 7 AA6 7 LEU 2 279 PRO 2 283 -1 O GLU 2 282 N SER 2 269 SHEET 1 AA7 2 ASN 2 147 TYR 2 148 0 SHEET 2 AA7 2 LEU 2 229 PRO 2 230 -1 O LEU 2 229 N TYR 2 148 SHEET 1 AA8 6 ALA C 158 ALA C 163 0 SHEET 2 AA8 6 VAL C 149 LEU C 153 -1 N HIS C 151 O GLU C 160 SHEET 3 AA8 6 ILE C 129 ARG C 135 -1 N LEU C 133 O TYR C 150 SHEET 4 AA8 6 PHE C 187 ILE C 194 -1 O ALA C 188 N CYS C 134 SHEET 5 AA8 6 VAL C 254 GLY C 263 -1 O LEU C 257 N TYR C 191 SHEET 6 AA8 6 LYS C 231 TRP C 235 -1 N TRP C 235 O VAL C 259 SHEET 1 AA9 4 VAL D 4 TYR D 5 0 SHEET 2 AA9 4 THR D 15 MET D 18 -1 O MET D 16 N VAL D 4 SHEET 3 AA9 4 THR D 28 TRP D 33 -1 O GLN D 31 N ALA D 17 SHEET 4 AA9 4 ALA D 41 GLY D 45 -1 O ALA D 41 N ILE D 32 SHEET 1 AB1 3 GLN D 73 LYS D 74 0 SHEET 2 AB1 3 PHE D 108 ASN D 115 -1 O PHE D 108 N LYS D 74 SHEET 3 AB1 3 GLN D 121 PRO D 125 -1 O GLN D 122 N ALA D 113 SHEET 1 AB2 5 GLN D 73 LYS D 74 0 SHEET 2 AB2 5 PHE D 108 ASN D 115 -1 O PHE D 108 N LYS D 74 SHEET 3 AB2 5 PHE D 339 VAL D 347 -1 O VAL D 340 N PHE D 114 SHEET 4 AB2 5 SER D 350 VAL D 358 -1 O LYS D 356 N TYR D 341 SHEET 5 AB2 5 CYS D 151 HIS D 154 -1 N HIS D 154 O TRP D 353 SHEET 1 AB3 2 LYS D 182 ALA D 183 0 SHEET 2 AB3 2 VAL D 307 LEU D 308 1 O VAL D 307 N ALA D 183 SHEET 1 AB4 4 THR D 185 ILE D 187 0 SHEET 2 AB4 4 ASP D 210 ASP D 215 -1 O ASP D 215 N THR D 185 SHEET 3 AB4 4 HIS D 224 GLY D 231 -1 O LEU D 227 N PHE D 214 SHEET 4 AB4 4 TYR D 241 ALA D 248 -1 O ALA D 248 N HIS D 224 LINK C F6N A 56 N GLY A 57 1555 1555 1.34 LINK SG CYS 1 192 ZN ZN 1 401 1555 1555 2.32 LINK SG CYS 1 195 ZN ZN 1 401 1555 1555 2.36 LINK SG CYS 1 290 ZN ZN 1 401 1555 1555 2.35 LINK SG CYS 1 292 ZN ZN 1 401 1555 1555 2.34 LINK SG CYS 2 192 ZN ZN 2 401 1555 1555 2.32 LINK SG CYS 2 195 ZN ZN 2 401 1555 1555 2.35 LINK SG CYS 2 290 ZN ZN 2 401 1555 1555 2.33 LINK SG CYS 2 292 ZN ZN 2 401 1555 1555 2.27 LINK OE1 GLU D 57 MG MG D 706 1555 1555 2.18 LINK OE1 GLU D 167 MG MG D 705 1555 1555 2.17 LINK OE2 GLU D 261 MG MG D 704 1555 1555 2.17 LINK O1B ADP D 702 MG MG D 704 1555 1555 2.18 LINK O2B ADP D 702 MG MG D 705 1555 1555 2.17 LINK O3B ADP D 702 MG MG D 706 1555 1555 2.13 LINK O1 PO4 D 703 MG MG D 704 1555 1555 2.17 LINK O4 PO4 D 703 MG MG D 705 1555 1555 2.19 LINK O3 PO4 D 703 MG MG D 706 1555 1555 2.19 LINK MG MG D 704 O HOH D 803 1555 1555 2.18 LINK MG MG D 704 O HOH D 804 1555 1555 2.17 LINK MG MG D 704 O HOH D 811 1555 1555 2.15 LINK MG MG D 705 O HOH D 813 1555 1555 2.17 LINK MG MG D 705 O HOH D 817 1555 1555 2.19 LINK MG MG D 705 O HOH D 822 1555 1555 2.18 LINK MG MG D 706 O HOH D 808 1555 1555 2.19 LINK MG MG D 706 O HOH D 809 1555 1555 2.14 LINK MG MG D 706 O HOH D 818 1555 1555 2.14 SITE 1 AC1 18 F6N A 56 GLY A 57 SER A 58 HOH A 501 SITE 2 AC1 18 ARG C 82 PRO C 84 SER C 85 ARG C 117 SITE 3 AC1 18 PRO C 121 SER C 122 GLY C 123 ARG C 181 SITE 4 AC1 18 TYR C 218 ARG C 233 VAL C 234 TRP C 235 SITE 5 AC1 18 ALA C 236 GLY C 237 SITE 1 AC2 4 CYS 1 192 CYS 1 195 CYS 1 290 CYS 1 292 SITE 1 AC3 3 ARG 1 199 ARG 1 203 ARG 1 210 SITE 1 AC4 7 CYS 1 195 ARG 1 199 ARG 1 210 GLU 1 212 SITE 2 AC4 7 VAL 1 284 ILE 1 285 TRP 1 287 SITE 1 AC5 4 CYS 2 192 CYS 2 195 CYS 2 290 CYS 2 292 SITE 1 AC6 10 GLU 2 59 TYR 2 60 THR 2 91 ILE C 70 SITE 2 AC6 10 ASN C 71 SER C 73 SER C 74 ILE C 97 SITE 3 AC6 10 GLU C 101 TRP C 143 SITE 1 AC7 4 SER 2 177 ARG 2 179 SER 2 271 MET D 9 SITE 1 AC8 7 PHE 2 18 GLU 2 19 ARG 2 51 GLY D 155 SITE 2 AC8 7 SER D 350 LEU D 351 TRP D 353 SITE 1 AC9 22 LEU 1 222 GLN D 52 GLY D 53 GLY D 56 SITE 2 AC9 22 GLU D 57 GLU D 60 PHE D 153 HIS D 154 SITE 3 AC9 22 GLU D 167 LYS D 257 GLU D 261 PO4 D 703 SITE 4 AC9 22 MG D 704 MG D 705 MG D 706 HOH D 804 SITE 5 AC9 22 HOH D 808 HOH D 812 HOH D 813 HOH D 816 SITE 6 AC9 22 HOH D 817 HOH D 854 SITE 1 AD1 12 GLU D 57 ARG D 61 GLU D 167 ARG D 171 SITE 2 AD1 12 GLU D 261 ADP D 702 MG D 704 MG D 705 SITE 3 AD1 12 MG D 706 HOH D 809 HOH D 813 HOH D 822 SITE 1 AD2 7 GLU D 170 GLU D 261 ADP D 702 PO4 D 703 SITE 2 AD2 7 HOH D 803 HOH D 804 HOH D 811 SITE 1 AD3 6 GLU D 167 ADP D 702 PO4 D 703 HOH D 813 SITE 2 AD3 6 HOH D 817 HOH D 822 SITE 1 AD4 6 GLU D 57 ADP D 702 PO4 D 703 HOH D 808 SITE 2 AD4 6 HOH D 809 HOH D 818 SITE 1 AD5 1 ASN D 249 CRYST1 180.640 83.280 86.790 90.00 91.43 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005536 0.000000 0.000138 0.00000 SCALE2 0.000000 0.012008 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011526 0.00000