HEADER TRANSFERASE 15-JUN-18 6GT5 TITLE METTL16 MTASE DOMAIN (CRYSTAL FORM 2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: U6 SMALL NUCLEAR RNA (ADENINE-(43)-N(6))-METHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: METHYLTRANSFERASE 10 DOMAIN-CONTAINING PROTEIN, COMPND 5 METHYLTRANSFERASE-LIKE PROTEIN 16,N6-ADENOSINE-METHYLTRANSFERASE COMPND 6 METTL16; COMPND 7 EC: 2.1.1.346,2.1.1.62; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: METTL16, METT10D; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PETM-11-SUMO KEYWDS RNA SAM METHYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.M.CHEN,M.MENDEL,D.HOMOLKA,A.A.MCCARTHY,R.S.PILLAI REVDAT 3 17-JAN-24 6GT5 1 REMARK REVDAT 2 03-OCT-18 6GT5 1 JRNL REVDAT 1 19-SEP-18 6GT5 0 JRNL AUTH M.MENDEL,K.M.CHEN,D.HOMOLKA,P.GOS,R.R.PANDEY,A.A.MCCARTHY, JRNL AUTH 2 R.S.PILLAI JRNL TITL METHYLATION OF STRUCTURED RNA BY THE M6A WRITER METTL16 IS JRNL TITL 2 ESSENTIAL FOR MOUSE EMBRYONIC DEVELOPMENT. JRNL REF MOL. CELL V. 71 986 2018 JRNL REFN ISSN 1097-4164 JRNL PMID 30197299 JRNL DOI 10.1016/J.MOLCEL.2018.08.004 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 80.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 45.0 REMARK 3 NUMBER OF REFLECTIONS : 12391 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 617 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 30 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.75 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 5.22 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 414 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2375 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 393 REMARK 3 BIN R VALUE (WORKING SET) : 0.2336 REMARK 3 BIN FREE R VALUE : 0.3054 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.07 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4011 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 25 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 63.09 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.97380 REMARK 3 B22 (A**2) : 2.97380 REMARK 3 B33 (A**2) : -5.94760 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.350 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.432 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.922 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.877 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4104 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5564 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1405 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 680 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4104 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 533 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4520 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.10 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.61 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 22.11 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -4.8022 -25.6985 -18.2369 REMARK 3 T TENSOR REMARK 3 T11: -0.1930 T22: -0.1701 REMARK 3 T33: -0.0865 T12: 0.0998 REMARK 3 T13: 0.0468 T23: 0.0531 REMARK 3 L TENSOR REMARK 3 L11: 2.4093 L22: 0.9009 REMARK 3 L33: 7.8845 L12: 0.3239 REMARK 3 L13: -1.2853 L23: 0.6714 REMARK 3 S TENSOR REMARK 3 S11: -0.1371 S12: 0.1192 S13: 0.0182 REMARK 3 S21: -0.0588 S22: 0.1713 S23: 0.1472 REMARK 3 S31: 0.2267 S32: 0.0644 S33: -0.0342 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 16.3742 -33.7365 12.4419 REMARK 3 T TENSOR REMARK 3 T11: -0.2500 T22: 0.2552 REMARK 3 T33: -0.2841 T12: 0.1229 REMARK 3 T13: -0.0460 T23: -0.1059 REMARK 3 L TENSOR REMARK 3 L11: 1.4894 L22: 2.1278 REMARK 3 L33: 5.0911 L12: -0.0072 REMARK 3 L13: -1.2801 L23: 0.0333 REMARK 3 S TENSOR REMARK 3 S11: 0.2726 S12: -0.0372 S13: 0.0158 REMARK 3 S21: 0.4874 S22: -0.1940 S23: -0.1322 REMARK 3 S31: 0.4476 S32: 0.6091 S33: -0.0786 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GT5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1200010492. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8731 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : BE CRL AND MULTILAYER MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS BUILT 20171111 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.6.2, AUTOPROC 1.0.5, REMARK 200 STARANISO 1.10.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12391 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 80.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.36000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.9 REMARK 200 DATA REDUNDANCY IN SHELL : 10.80 REMARK 200 R MERGE FOR SHELL (I) : 1.58000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.7.17 REMARK 200 STARTING MODEL: 6GFN REMARK 200 REMARK 200 REMARK: ROD SHAPED REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PROPANE, 0.2 M REMARK 280 POTTASSIUM-SODIUM TARTRATE, 20% PEG 3350, PH 6.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.56500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 44.77500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 44.77500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.78250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 44.77500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 44.77500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 134.34750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 44.77500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.77500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 44.78250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 44.77500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.77500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 134.34750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 89.56500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 97 REMARK 465 SER A 98 REMARK 465 ASP A 99 REMARK 465 PHE A 188 REMARK 465 ALA A 189 REMARK 465 ASN A 190 REMARK 465 GLN A 191 REMARK 465 LEU A 192 REMARK 465 GLU A 193 REMARK 465 ALA A 194 REMARK 465 LYS A 195 REMARK 465 GLY A 196 REMARK 465 VAL A 197 REMARK 465 ASN A 198 REMARK 465 SER A 199 REMARK 465 ARG A 200 REMARK 465 ASN A 201 REMARK 465 PRO A 202 REMARK 465 ARG A 203 REMARK 465 ARG A 204 REMARK 465 PRO A 205 REMARK 465 PRO A 206 REMARK 465 PRO A 207 REMARK 465 SER A 208 REMARK 465 SER A 209 REMARK 465 VAL A 210 REMARK 465 ASN A 211 REMARK 465 THR A 212 REMARK 465 GLY A 213 REMARK 465 GLY A 214 REMARK 465 ILE A 215 REMARK 465 THR A 216 REMARK 465 GLU A 217 REMARK 465 ILE A 218 REMARK 465 MET A 219 REMARK 465 ALA A 220 REMARK 465 GLU A 221 REMARK 465 ASP B 97 REMARK 465 SER B 98 REMARK 465 ASP B 99 REMARK 465 PHE B 187 REMARK 465 PHE B 188 REMARK 465 ALA B 189 REMARK 465 ASN B 190 REMARK 465 GLN B 191 REMARK 465 LEU B 192 REMARK 465 GLU B 193 REMARK 465 ALA B 194 REMARK 465 LYS B 195 REMARK 465 GLY B 196 REMARK 465 VAL B 197 REMARK 465 ASN B 198 REMARK 465 SER B 199 REMARK 465 ARG B 200 REMARK 465 ASN B 201 REMARK 465 PRO B 202 REMARK 465 ARG B 203 REMARK 465 ARG B 204 REMARK 465 PRO B 205 REMARK 465 PRO B 206 REMARK 465 PRO B 207 REMARK 465 SER B 208 REMARK 465 SER B 209 REMARK 465 VAL B 210 REMARK 465 ASN B 211 REMARK 465 THR B 212 REMARK 465 GLY B 213 REMARK 465 GLY B 214 REMARK 465 ILE B 215 REMARK 465 THR B 216 REMARK 465 GLU B 217 REMARK 465 ILE B 218 REMARK 465 MET B 219 REMARK 465 ALA B 220 REMARK 465 GLU B 221 REMARK 465 GLY B 222 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 38 CG CD1 CD2 REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 LYS A 100 CG CD CE NZ REMARK 470 LEU A 103 CG CD1 CD2 REMARK 470 LYS A 163 CG CD CE NZ REMARK 470 LYS A 171 CG CD CE NZ REMARK 470 GLU A 172 CG CD OE1 OE2 REMARK 470 ARG A 279 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 3 CG CD1 CD2 REMARK 470 SER B 4 OG REMARK 470 LYS B 5 CG CD CE NZ REMARK 470 ASP B 15 CG OD1 OD2 REMARK 470 LYS B 16 CG CD CE NZ REMARK 470 LEU B 38 CG CD1 CD2 REMARK 470 ASN B 45 CG OD1 ND2 REMARK 470 LYS B 47 CG CD CE NZ REMARK 470 SER B 67 OG REMARK 470 ASP B 69 CG OD1 OD2 REMARK 470 LYS B 100 CG CD CE NZ REMARK 470 SER B 101 OG REMARK 470 GLN B 162 CG CD OE1 NE2 REMARK 470 LYS B 163 CG CD CE NZ REMARK 470 LYS B 171 CG CD CE NZ REMARK 470 GLU B 172 CG CD OE1 OE2 REMARK 470 LYS B 251 CG CD CE NZ REMARK 470 LYS B 252 CG CD CE NZ REMARK 470 GLN B 277 CG CD OE1 NE2 REMARK 470 ARG B 279 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 6 46.52 39.75 REMARK 500 HIS A 8 140.29 -38.91 REMARK 500 LYS A 16 74.56 -119.76 REMARK 500 LEU A 38 2.17 -57.55 REMARK 500 LEU A 75 119.21 -22.59 REMARK 500 GLN A 162 -49.16 -26.99 REMARK 500 LEU A 165 -110.85 -131.79 REMARK 500 LEU A 170 40.99 -87.67 REMARK 500 GLU A 172 38.68 -93.41 REMARK 500 LYS A 239 -108.26 40.36 REMARK 500 GLN A 277 80.65 -160.11 REMARK 500 SER B 6 -67.73 69.70 REMARK 500 LYS B 16 79.50 -112.75 REMARK 500 PHE B 46 -7.49 -58.44 REMARK 500 ARG B 74 -161.95 -100.40 REMARK 500 LEU B 103 132.55 -35.56 REMARK 500 LEU B 151 17.28 -140.92 REMARK 500 GLN B 162 -33.93 -36.02 REMARK 500 LEU B 165 -143.57 -159.65 REMARK 500 GLU B 172 50.74 -119.21 REMARK 500 LYS B 239 -111.28 42.61 REMARK 500 CYS B 253 8.92 -67.19 REMARK 500 REMARK 500 REMARK: NULL DBREF 6GT5 A 1 291 UNP Q86W50 MET16_HUMAN 1 291 DBREF 6GT5 B 1 291 UNP Q86W50 MET16_HUMAN 1 291 SEQRES 1 A 291 MET ALA LEU SER LYS SER MET HIS ALA ARG ASN ARG TYR SEQRES 2 A 291 LYS ASP LYS PRO PRO ASP PHE ALA TYR LEU ALA SER LYS SEQRES 3 A 291 TYR PRO ASP PHE LYS GLN HIS VAL GLN ILE ASN LEU ASN SEQRES 4 A 291 GLY ARG VAL SER LEU ASN PHE LYS ASP PRO GLU ALA VAL SEQRES 5 A 291 ARG ALA LEU THR CYS THR LEU LEU ARG GLU ASP PHE GLY SEQRES 6 A 291 LEU SER ILE ASP ILE PRO LEU GLU ARG LEU ILE PRO THR SEQRES 7 A 291 VAL PRO LEU ARG LEU ASN TYR ILE HIS TRP VAL GLU ASP SEQRES 8 A 291 LEU ILE GLY HIS GLN ASP SER ASP LYS SER THR LEU ARG SEQRES 9 A 291 ARG GLY ILE ASP ILE GLY THR GLY ALA SER CYS ILE TYR SEQRES 10 A 291 PRO LEU LEU GLY ALA THR LEU ASN GLY TRP TYR PHE LEU SEQRES 11 A 291 ALA THR GLU VAL ASP ASP MET CYS PHE ASN TYR ALA LYS SEQRES 12 A 291 LYS ASN VAL GLU GLN ASN ASN LEU SER ASP LEU ILE LYS SEQRES 13 A 291 VAL VAL LYS VAL PRO GLN LYS THR LEU LEU MET ASP ALA SEQRES 14 A 291 LEU LYS GLU GLU SER GLU ILE ILE TYR ASP PHE CYS MET SEQRES 15 A 291 CYS ASN PRO PRO PHE PHE ALA ASN GLN LEU GLU ALA LYS SEQRES 16 A 291 GLY VAL ASN SER ARG ASN PRO ARG ARG PRO PRO PRO SER SEQRES 17 A 291 SER VAL ASN THR GLY GLY ILE THR GLU ILE MET ALA GLU SEQRES 18 A 291 GLY GLY GLU LEU GLU PHE VAL LYS ARG ILE ILE HIS ASP SEQRES 19 A 291 SER LEU GLN LEU LYS LYS ARG LEU ARG TRP TYR SER CYS SEQRES 20 A 291 MET LEU GLY LYS LYS CYS SER LEU ALA PRO LEU LYS GLU SEQRES 21 A 291 GLU LEU ARG ILE GLN GLY VAL PRO LYS VAL THR TYR THR SEQRES 22 A 291 GLU PHE CYS GLN GLY ARG THR MET ARG TRP ALA LEU ALA SEQRES 23 A 291 TRP SER PHE TYR ASP SEQRES 1 B 291 MET ALA LEU SER LYS SER MET HIS ALA ARG ASN ARG TYR SEQRES 2 B 291 LYS ASP LYS PRO PRO ASP PHE ALA TYR LEU ALA SER LYS SEQRES 3 B 291 TYR PRO ASP PHE LYS GLN HIS VAL GLN ILE ASN LEU ASN SEQRES 4 B 291 GLY ARG VAL SER LEU ASN PHE LYS ASP PRO GLU ALA VAL SEQRES 5 B 291 ARG ALA LEU THR CYS THR LEU LEU ARG GLU ASP PHE GLY SEQRES 6 B 291 LEU SER ILE ASP ILE PRO LEU GLU ARG LEU ILE PRO THR SEQRES 7 B 291 VAL PRO LEU ARG LEU ASN TYR ILE HIS TRP VAL GLU ASP SEQRES 8 B 291 LEU ILE GLY HIS GLN ASP SER ASP LYS SER THR LEU ARG SEQRES 9 B 291 ARG GLY ILE ASP ILE GLY THR GLY ALA SER CYS ILE TYR SEQRES 10 B 291 PRO LEU LEU GLY ALA THR LEU ASN GLY TRP TYR PHE LEU SEQRES 11 B 291 ALA THR GLU VAL ASP ASP MET CYS PHE ASN TYR ALA LYS SEQRES 12 B 291 LYS ASN VAL GLU GLN ASN ASN LEU SER ASP LEU ILE LYS SEQRES 13 B 291 VAL VAL LYS VAL PRO GLN LYS THR LEU LEU MET ASP ALA SEQRES 14 B 291 LEU LYS GLU GLU SER GLU ILE ILE TYR ASP PHE CYS MET SEQRES 15 B 291 CYS ASN PRO PRO PHE PHE ALA ASN GLN LEU GLU ALA LYS SEQRES 16 B 291 GLY VAL ASN SER ARG ASN PRO ARG ARG PRO PRO PRO SER SEQRES 17 B 291 SER VAL ASN THR GLY GLY ILE THR GLU ILE MET ALA GLU SEQRES 18 B 291 GLY GLY GLU LEU GLU PHE VAL LYS ARG ILE ILE HIS ASP SEQRES 19 B 291 SER LEU GLN LEU LYS LYS ARG LEU ARG TRP TYR SER CYS SEQRES 20 B 291 MET LEU GLY LYS LYS CYS SER LEU ALA PRO LEU LYS GLU SEQRES 21 B 291 GLU LEU ARG ILE GLN GLY VAL PRO LYS VAL THR TYR THR SEQRES 22 B 291 GLU PHE CYS GLN GLY ARG THR MET ARG TRP ALA LEU ALA SEQRES 23 B 291 TRP SER PHE TYR ASP FORMUL 3 HOH *25(H2 O) HELIX 1 AA1 LYS A 5 MET A 7 5 3 HELIX 2 AA2 ASN A 11 LYS A 16 1 6 HELIX 3 AA3 ASP A 19 TYR A 27 1 9 HELIX 4 AA4 TYR A 27 GLN A 32 1 6 HELIX 5 AA5 ASP A 48 GLY A 65 1 18 HELIX 6 AA6 THR A 78 ILE A 93 1 16 HELIX 7 AA7 CYS A 115 GLY A 126 1 12 HELIX 8 AA8 ASP A 135 GLN A 148 1 14 HELIX 9 AA9 MET A 167 LYS A 171 5 5 HELIX 10 AB1 GLY A 223 LYS A 239 1 17 HELIX 11 AB2 LYS A 251 CYS A 253 5 3 HELIX 12 AB3 SER A 254 GLN A 265 1 12 HELIX 13 AB4 ASN B 11 LYS B 16 1 6 HELIX 14 AB5 ASP B 19 TYR B 27 1 9 HELIX 15 AB6 TYR B 27 GLN B 32 1 6 HELIX 16 AB7 ASP B 48 GLY B 65 1 18 HELIX 17 AB8 THR B 78 GLY B 94 1 17 HELIX 18 AB9 CYS B 115 ASN B 125 1 11 HELIX 19 AC1 ASP B 135 ASN B 149 1 15 HELIX 20 AC2 LEU B 165 LEU B 170 1 6 HELIX 21 AC3 GLU B 224 LYS B 239 1 16 HELIX 22 AC4 LYS B 251 CYS B 253 5 3 HELIX 23 AC5 SER B 254 GLN B 265 1 12 SHEET 1 AA1 8 ALA A 2 LEU A 3 0 SHEET 2 AA1 8 LYS B 269 GLN B 277 -1 O VAL B 270 N ALA A 2 SHEET 3 AA1 8 THR B 280 SER B 288 -1 O ALA B 286 N THR B 271 SHEET 4 AA1 8 LEU B 242 LEU B 249 -1 N LEU B 249 O TRP B 283 SHEET 5 AA1 8 TYR B 178 CYS B 183 1 N TYR B 178 O ARG B 243 SHEET 6 AA1 8 ARG B 105 ILE B 109 1 N ILE B 107 O MET B 182 SHEET 7 AA1 8 TYR B 128 GLU B 133 1 O THR B 132 N ASP B 108 SHEET 8 AA1 8 ILE B 155 LYS B 159 1 O VAL B 158 N ALA B 131 SHEET 1 AA2 2 VAL A 34 ILE A 36 0 SHEET 2 AA2 2 VAL A 42 LEU A 44 -1 O SER A 43 N GLN A 35 SHEET 1 AA3 8 ILE A 155 LYS A 159 0 SHEET 2 AA3 8 TYR A 128 GLU A 133 1 N ALA A 131 O VAL A 158 SHEET 3 AA3 8 ARG A 105 ILE A 109 1 N ASP A 108 O LEU A 130 SHEET 4 AA3 8 TYR A 178 CYS A 183 1 O MET A 182 N ILE A 107 SHEET 5 AA3 8 LEU A 242 LEU A 249 1 O ARG A 243 N TYR A 178 SHEET 6 AA3 8 THR A 280 SER A 288 -1 O TRP A 283 N LEU A 249 SHEET 7 AA3 8 LYS A 269 GLN A 277 -1 N THR A 271 O ALA A 286 SHEET 8 AA3 8 ALA B 2 LEU B 3 -1 O ALA B 2 N VAL A 270 SHEET 1 AA4 2 GLN B 35 ILE B 36 0 SHEET 2 AA4 2 VAL B 42 SER B 43 -1 O SER B 43 N GLN B 35 CRYST1 89.550 89.550 179.130 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011167 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011167 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005583 0.00000