HEADER TRANSCRIPTION 18-JUN-18 6GTR TITLE STRUCTURE OF THE ATAT Y144F MUTANT TOXIN BOUND TO THE C-TERMINUS OF TITLE 2 THE ANTITOXIN ATAR AND ACETYL-COA COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-ACETYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DUF1778 DOMAIN-CONTAINING PROTEIN; COMPND 7 CHAIN: C, D; COMPND 8 SYNONYM: TOXIN-ANTITOXIN SYSTEM,ANTITOXIN COMPONENT,RIBBON-HELIX- COMPND 9 HELIX FOLD PROTEIN,YBL13; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: BWP17_00640, CVH05_12355; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 10 ORGANISM_TAXID: 562 KEYWDS TA TOXIN, ANTITOXIN, N-ACETYL TRANSFERASE, RIBBON-HELIX-HELIX, RHH, KEYWDS 2 BACTERIAL REPRESSOR, TRANSCRIPTION, TOXIN-ANTITOXIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.GARCIA-PINO,D.JURENAS REVDAT 2 17-JAN-24 6GTR 1 REMARK REVDAT 1 06-MAR-19 6GTR 0 JRNL AUTH D.JURENAS,L.VAN MELDEREN,A.GARCIA-PINO JRNL TITL MECHANISM OF REGULATION AND NEUTRALIZATION OF THE ATAR-ATAT JRNL TITL 2 TOXIN-ANTITOXIN SYSTEM. JRNL REF NAT. CHEM. BIOL. V. 15 285 2019 JRNL REFN ESSN 1552-4469 JRNL PMID 30718814 JRNL DOI 10.1038/S41589-018-0216-Z REMARK 2 REMARK 2 RESOLUTION. 2.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 11694 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 585 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.28 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.20 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2718 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2374 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2582 REMARK 3 BIN R VALUE (WORKING SET) : 0.2321 REMARK 3 BIN FREE R VALUE : 0.3448 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 136 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3023 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 33 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 69.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.84270 REMARK 3 B22 (A**2) : -6.84270 REMARK 3 B33 (A**2) : 13.68550 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.350 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.399 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.921 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.881 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3144 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4272 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1063 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 529 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3144 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 418 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3509 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.19 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.96 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 22.17 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -17.7956 35.7569 -21.0193 REMARK 3 T TENSOR REMARK 3 T11: -0.1123 T22: -0.0204 REMARK 3 T33: -0.1162 T12: -0.1409 REMARK 3 T13: 0.0818 T23: -0.0221 REMARK 3 L TENSOR REMARK 3 L11: 2.4810 L22: 3.7722 REMARK 3 L33: 4.0306 L12: 1.7018 REMARK 3 L13: 2.3000 L23: 3.0355 REMARK 3 S TENSOR REMARK 3 S11: -0.0553 S12: 0.2755 S13: -0.0806 REMARK 3 S21: -0.1344 S22: 0.1958 S23: -0.2252 REMARK 3 S31: -0.1471 S32: 0.4174 S33: -0.1405 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -32.4179 39.0310 4.5999 REMARK 3 T TENSOR REMARK 3 T11: -0.1805 T22: -0.0618 REMARK 3 T33: -0.1732 T12: -0.1430 REMARK 3 T13: 0.0041 T23: -0.0695 REMARK 3 L TENSOR REMARK 3 L11: 5.0606 L22: 3.3191 REMARK 3 L33: 3.8429 L12: 1.1549 REMARK 3 L13: -3.0050 L23: 0.5430 REMARK 3 S TENSOR REMARK 3 S11: 0.3100 S12: -0.5201 S13: 0.2943 REMARK 3 S21: 0.0488 S22: -0.0674 S23: -0.0456 REMARK 3 S31: -0.3117 S32: 0.3455 S33: -0.2425 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): -10.8729 44.4431 -13.9519 REMARK 3 T TENSOR REMARK 3 T11: -0.0586 T22: -0.0398 REMARK 3 T33: -0.0407 T12: -0.1610 REMARK 3 T13: 0.1198 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 5.5144 L22: 4.5252 REMARK 3 L33: 0.4795 L12: 0.3599 REMARK 3 L13: 2.6964 L23: 0.9882 REMARK 3 S TENSOR REMARK 3 S11: -0.1560 S12: 0.2936 S13: 0.1778 REMARK 3 S21: -0.2389 S22: 0.3636 S23: -0.2382 REMARK 3 S31: -0.0411 S32: 0.0020 S33: -0.2077 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): -33.4585 25.2816 1.6318 REMARK 3 T TENSOR REMARK 3 T11: -0.1541 T22: -0.0798 REMARK 3 T33: -0.0244 T12: -0.1493 REMARK 3 T13: 0.0106 T23: -0.0311 REMARK 3 L TENSOR REMARK 3 L11: 2.3167 L22: 4.4463 REMARK 3 L33: 6.1689 L12: 0.3278 REMARK 3 L13: 3.1689 L23: -2.0925 REMARK 3 S TENSOR REMARK 3 S11: -0.0799 S12: 0.1379 S13: -0.2014 REMARK 3 S21: -0.1632 S22: 0.0250 S23: -0.0665 REMARK 3 S31: 0.1379 S32: 0.0400 S33: 0.0549 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GTR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1200010554. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11694 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.990 REMARK 200 RESOLUTION RANGE LOW (A) : 45.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.30000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6GTQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CITRATE, 20%(W/V) PEG 6000, PH REMARK 280 5.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.87000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 83.74000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 83.74000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 41.87000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -3 REMARK 465 GLY A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 LEU A 73 REMARK 465 PRO A 74 REMARK 465 SER A 75 REMARK 465 LYS A 76 REMARK 465 SER A 77 REMARK 465 LYS A 78 REMARK 465 GLN A 79 REMARK 465 LYS A 80 REMARK 465 LYS A 81 REMARK 465 ILE A 82 REMARK 465 PRO A 83 REMARK 465 TYR A 84 REMARK 465 SER A 173 REMARK 465 ASP A 174 REMARK 465 MET B -3 REMARK 465 GLY B -2 REMARK 465 ALA B -1 REMARK 465 SER B 0 REMARK 465 ASN B 51 REMARK 465 THR B 52 REMARK 465 PRO B 53 REMARK 465 GLU B 54 REMARK 465 LEU B 73 REMARK 465 PRO B 74 REMARK 465 SER B 75 REMARK 465 LYS B 76 REMARK 465 SER B 77 REMARK 465 LYS B 78 REMARK 465 GLN B 79 REMARK 465 LYS B 80 REMARK 465 LYS B 81 REMARK 465 ILE B 82 REMARK 465 PRO B 83 REMARK 465 TYR B 84 REMARK 465 SER B 173 REMARK 465 ASP B 174 REMARK 465 MET C 42 REMARK 465 ALA C 43 REMARK 465 ALA C 44 REMARK 465 GLU C 45 REMARK 465 VAL C 46 REMARK 465 ILE C 47 REMARK 465 MET D 42 REMARK 465 ALA D 43 REMARK 465 ALA D 44 REMARK 465 GLU D 45 REMARK 465 VAL D 46 REMARK 465 ILE D 47 REMARK 465 GLU D 48 REMARK 465 GLN D 49 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 18 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 24 CG CD OE1 OE2 REMARK 470 PHE A 68 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 69 CD OE1 OE2 REMARK 470 ILE A 87 CG1 CG2 CD1 REMARK 470 LEU A 135 CG CD1 CD2 REMARK 470 LYS A 138 CG CD CE NZ REMARK 470 GLU A 154 CG CD OE1 OE2 REMARK 470 ARG B 18 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 23 CG CD OE1 OE2 REMARK 470 GLU B 24 CG CD OE1 OE2 REMARK 470 CYS B 67 SG REMARK 470 ARG B 70 CG CD NE CZ NH1 NH2 REMARK 470 THR B 171 OG1 CG2 REMARK 470 GLN B 172 CG CD OE1 NE2 REMARK 470 GLU C 48 CG CD OE1 OE2 REMARK 470 GLN C 49 CG CD OE1 NE2 REMARK 470 HIS C 50 CG ND1 CD2 CE1 NE2 REMARK 470 ARG C 51 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 52 CG CD NE CZ NH1 NH2 REMARK 470 HIS D 50 CG ND1 CD2 CE1 NE2 REMARK 470 ARG D 51 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 52 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 55 74.27 37.62 REMARK 500 ARG A 70 -155.87 -120.85 REMARK 500 THR A 171 -46.98 -131.66 REMARK 500 ALA B 12 138.98 -36.62 REMARK 500 HIS B 33 -56.47 -120.20 REMARK 500 LYS B 41 42.95 70.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 101 O REMARK 620 2 ACO A 201 O4A 131.5 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACO A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 201 DBREF1 6GTR A 1 174 UNP A0A1V3CQ74_ECOLX DBREF2 6GTR A A0A1V3CQ74 2 175 DBREF1 6GTR B 1 174 UNP A0A1V3CQ74_ECOLX DBREF2 6GTR B A0A1V3CQ74 2 175 DBREF 6GTR C 43 87 UNP J7QA90 J7QA90_ECOLX 44 88 DBREF 6GTR D 43 87 UNP J7QA90 J7QA90_ECOLX 44 88 SEQADV 6GTR MET A -3 UNP A0A1V3CQ7 INITIATING METHIONINE SEQADV 6GTR GLY A -2 UNP A0A1V3CQ7 EXPRESSION TAG SEQADV 6GTR ALA A -1 UNP A0A1V3CQ7 EXPRESSION TAG SEQADV 6GTR SER A 0 UNP A0A1V3CQ7 EXPRESSION TAG SEQADV 6GTR PHE A 143 UNP A0A1V3CQ7 TYR 144 ENGINEERED MUTATION SEQADV 6GTR MET B -3 UNP A0A1V3CQ7 INITIATING METHIONINE SEQADV 6GTR GLY B -2 UNP A0A1V3CQ7 EXPRESSION TAG SEQADV 6GTR ALA B -1 UNP A0A1V3CQ7 EXPRESSION TAG SEQADV 6GTR SER B 0 UNP A0A1V3CQ7 EXPRESSION TAG SEQADV 6GTR PHE B 143 UNP A0A1V3CQ7 TYR 144 ENGINEERED MUTATION SEQADV 6GTR MET C 42 UNP J7QA90 INITIATING METHIONINE SEQADV 6GTR MET D 42 UNP J7QA90 INITIATING METHIONINE SEQRES 1 A 178 MET GLY ALA SER ASP ASP LEU THR ILE GLU ILE LEU THR SEQRES 2 A 178 ASP ASP ALA ASP TYR ASP LEU GLN ARG PHE ASP CYS GLY SEQRES 3 A 178 GLU GLU ALA LEU ASN LEU PHE LEU THR THR HIS LEU VAL SEQRES 4 A 178 ARG GLN HIS ARG ASN LYS ILE LEU ARG ALA TYR ILE LEU SEQRES 5 A 178 CYS ARG ASN THR PRO GLU ARG GLN VAL LEU GLY TYR TYR SEQRES 6 A 178 THR LEU CYS GLY SER CYS PHE GLU ARG ALA ALA LEU PRO SEQRES 7 A 178 SER LYS SER LYS GLN LYS LYS ILE PRO TYR LYS ASN ILE SEQRES 8 A 178 PRO SER VAL THR LEU GLY ARG LEU ALA ILE ASP ARG SER SEQRES 9 A 178 LEU GLN GLY GLN GLY TRP GLY ALA THR LEU VAL ALA HIS SEQRES 10 A 178 ALA MET ASN VAL VAL TRP SER ALA SER LEU ALA VAL GLY SEQRES 11 A 178 ILE HIS GLY LEU PHE VAL GLU ALA LEU ASN GLU LYS ALA SEQRES 12 A 178 HIS THR PHE PHE LYS SER LEU GLY PHE ILE PRO LEU VAL SEQRES 13 A 178 GLY GLU ASN GLU ASN ALA LEU PHE PHE PRO THR LYS SER SEQRES 14 A 178 ILE GLU LEU LEU PHE THR GLN SER ASP SEQRES 1 B 178 MET GLY ALA SER ASP ASP LEU THR ILE GLU ILE LEU THR SEQRES 2 B 178 ASP ASP ALA ASP TYR ASP LEU GLN ARG PHE ASP CYS GLY SEQRES 3 B 178 GLU GLU ALA LEU ASN LEU PHE LEU THR THR HIS LEU VAL SEQRES 4 B 178 ARG GLN HIS ARG ASN LYS ILE LEU ARG ALA TYR ILE LEU SEQRES 5 B 178 CYS ARG ASN THR PRO GLU ARG GLN VAL LEU GLY TYR TYR SEQRES 6 B 178 THR LEU CYS GLY SER CYS PHE GLU ARG ALA ALA LEU PRO SEQRES 7 B 178 SER LYS SER LYS GLN LYS LYS ILE PRO TYR LYS ASN ILE SEQRES 8 B 178 PRO SER VAL THR LEU GLY ARG LEU ALA ILE ASP ARG SER SEQRES 9 B 178 LEU GLN GLY GLN GLY TRP GLY ALA THR LEU VAL ALA HIS SEQRES 10 B 178 ALA MET ASN VAL VAL TRP SER ALA SER LEU ALA VAL GLY SEQRES 11 B 178 ILE HIS GLY LEU PHE VAL GLU ALA LEU ASN GLU LYS ALA SEQRES 12 B 178 HIS THR PHE PHE LYS SER LEU GLY PHE ILE PRO LEU VAL SEQRES 13 B 178 GLY GLU ASN GLU ASN ALA LEU PHE PHE PRO THR LYS SER SEQRES 14 B 178 ILE GLU LEU LEU PHE THR GLN SER ASP SEQRES 1 C 46 MET ALA ALA GLU VAL ILE GLU GLN HIS ARG ARG VAL ILE SEQRES 2 C 46 LEU ASN GLU GLU SER TRP THR ARG VAL MET ASP ALA LEU SEQRES 3 C 46 SER ASN PRO PRO SER PRO GLY GLU LYS LEU LYS ARG ALA SEQRES 4 C 46 ALA LYS ARG LEU GLN GLY MET SEQRES 1 D 46 MET ALA ALA GLU VAL ILE GLU GLN HIS ARG ARG VAL ILE SEQRES 2 D 46 LEU ASN GLU GLU SER TRP THR ARG VAL MET ASP ALA LEU SEQRES 3 D 46 SER ASN PRO PRO SER PRO GLY GLU LYS LEU LYS ARG ALA SEQRES 4 D 46 ALA LYS ARG LEU GLN GLY MET HET ACO A 201 51 HET MG A 202 1 HET GOL B 201 6 HETNAM ACO ACETYL COENZYME *A HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 ACO C23 H38 N7 O17 P3 S FORMUL 6 MG MG 2+ FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *33(H2 O) HELIX 1 AA1 GLU A 23 HIS A 33 1 11 HELIX 2 AA2 HIS A 33 ASN A 40 1 8 HELIX 3 AA3 ARG A 99 GLN A 102 5 4 HELIX 4 AA4 GLY A 105 GLY A 126 1 22 HELIX 5 AA5 ASN A 136 LEU A 146 1 11 HELIX 6 AA6 VAL A 152 GLU A 156 5 5 HELIX 7 AA7 THR A 163 PHE A 170 1 8 HELIX 8 AA8 GLU B 24 HIS B 33 1 10 HELIX 9 AA9 HIS B 33 ASN B 40 1 8 HELIX 10 AB1 ARG B 99 GLN B 102 5 4 HELIX 11 AB2 GLY B 105 GLY B 126 1 22 HELIX 12 AB3 ASN B 136 SER B 145 1 10 HELIX 13 AB4 VAL B 152 GLU B 156 5 5 HELIX 14 AB5 THR B 163 GLN B 172 1 10 HELIX 15 AB6 ASN C 56 ASN C 69 1 14 HELIX 16 AB7 GLY C 74 GLY C 86 1 13 HELIX 17 AB8 ASN D 56 ASN D 69 1 14 HELIX 18 AB9 GLY D 74 MET D 87 1 14 SHEET 1 AA1 7 THR A 4 ILE A 7 0 SHEET 2 AA1 7 ARG A 44 CYS A 49 -1 O ILE A 47 N GLU A 6 SHEET 3 AA1 7 VAL A 57 GLU A 69 -1 O LEU A 58 N LEU A 48 SHEET 4 AA1 7 ASN A 86 LEU A 92 -1 O THR A 91 N CYS A 64 SHEET 5 AA1 7 GLY A 129 GLU A 133 1 O PHE A 131 N VAL A 90 SHEET 6 AA1 7 ALA A 158 PRO A 162 -1 O PHE A 161 N LEU A 130 SHEET 7 AA1 7 ILE A 149 PRO A 150 -1 N ILE A 149 O PHE A 160 SHEET 1 AA2 3 LEU A 95 ILE A 97 0 SHEET 2 AA2 3 VAL A 57 GLU A 69 -1 N TYR A 60 O ALA A 96 SHEET 3 AA2 3 ARG C 52 ILE C 54 1 O VAL C 53 N GLU A 69 SHEET 1 AA3 7 THR B 4 ILE B 7 0 SHEET 2 AA3 7 ARG B 44 CYS B 49 -1 O ILE B 47 N GLU B 6 SHEET 3 AA3 7 VAL B 57 ARG B 70 -1 O LEU B 58 N LEU B 48 SHEET 4 AA3 7 ILE B 87 ILE B 97 -1 O SER B 89 N SER B 66 SHEET 5 AA3 7 GLY B 129 GLU B 133 1 O PHE B 131 N LEU B 92 SHEET 6 AA3 7 ALA B 158 PRO B 162 -1 O PHE B 161 N LEU B 130 SHEET 7 AA3 7 ILE B 149 PRO B 150 -1 N ILE B 149 O PHE B 160 SHEET 1 AA4 4 THR B 4 ILE B 7 0 SHEET 2 AA4 4 ARG B 44 CYS B 49 -1 O ILE B 47 N GLU B 6 SHEET 3 AA4 4 VAL B 57 ARG B 70 -1 O LEU B 58 N LEU B 48 SHEET 4 AA4 4 ARG D 51 LEU D 55 1 O LEU D 55 N GLU B 69 LINK O LEU A 101 MG MG A 202 1555 1555 2.49 LINK O4A ACO A 201 MG MG A 202 1555 1555 2.99 SITE 1 AC1 15 GLY A 22 GLU A 23 LEU A 95 GLY A 103 SITE 2 AC1 15 GLN A 104 GLY A 105 TRP A 106 GLY A 107 SITE 3 AC1 15 ALA A 108 ALA A 139 PHE A 142 MG A 202 SITE 4 AC1 15 HOH A 303 LYS C 76 ARG C 83 SITE 1 AC2 5 LEU A 101 GLN A 104 GLY A 105 TRP A 106 SITE 2 AC2 5 ACO A 201 SITE 1 AC3 6 ASP A 13 ARG A 39 GLY B 103 GLY B 105 SITE 2 AC3 6 TRP B 106 GLY B 107 CRYST1 87.880 87.880 125.610 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011379 0.006570 0.000000 0.00000 SCALE2 0.000000 0.013140 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007961 0.00000