HEADER PROTON TRANSPORT 19-JUN-18 6GUZ TITLE GROUND STATE STRUCTURE OF ARCHAERHODOPSIN-3 OBTAINED FROM LCP CRYSTALS TITLE 2 USING A THIN-FILM SANDWICH AT ROOM TEMPERATURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARCHAERHODOPSIN-3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AR 3 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALORUBRUM SODOMENSE; SOURCE 3 ORGANISM_TAXID: 35743; SOURCE 4 ATCC: 33755; SOURCE 5 TISSUE: MEMBRANE KEYWDS MEMBRANE PROTEIN, RHODOPSIN, ARCHAERHODOPSIN, RETINAL, LCP, ROOM KEYWDS 2 TEMPERATURE, SYNCHROTRON, PROTON TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR I.MORAES,P.J.JUDGE,J.F.BADA JUAREZ,J.VINALS,D.AXFORD,A.WATTS REVDAT 4 16-OCT-24 6GUZ 1 REMARK REVDAT 3 17-JAN-24 6GUZ 1 LINK REVDAT 2 11-MAR-20 6GUZ 1 SEQRES REVDAT 1 09-OCT-19 6GUZ 0 JRNL AUTH J.F.BADA JUAREZ,P.J.JUDGE,J.VINALS,D.AXFORD,J.BIRCH,P.ALLER, JRNL AUTH 2 A.BUTRYN,R.L.OWEN,D.A.SHERRELL,J.H.BEALE,A.M.ORVILLE, JRNL AUTH 3 A.WATTS,I.MORAES JRNL TITL ROOM TEMPERATURE STRUCTURE OF THE ARCHAERHODOPSIN-3 OBTAINED JRNL TITL 2 FROM LCP CRYSTALS USING A THIN-FILM SANDWICH JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0232 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.2 REMARK 3 NUMBER OF REFLECTIONS : 16103 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 818 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1199 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.34 REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE SET COUNT : 64 REMARK 3 BIN FREE R VALUE : 0.2270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1803 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 110 REMARK 3 SOLVENT ATOMS : 56 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.00000 REMARK 3 B22 (A**2) : 0.11000 REMARK 3 B33 (A**2) : -1.11000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.184 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.158 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.132 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.481 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2040 ; 0.008 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2164 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2779 ; 1.462 ; 1.638 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4890 ; 0.481 ; 1.547 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 266 ; 4.840 ; 5.019 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 79 ;29.331 ;18.481 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 288 ;12.969 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;25.337 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 270 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2231 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 442 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6GUZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1200010272. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAR-17 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96862 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS 1.10.1 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20412 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 52.420 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.1 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.7.17 REMARK 200 STARTING MODEL: 1UAZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM MES PH 5.5, 33% PEG 600, 150MM REMARK 280 NA CHLORIDE, 150MM CA CHLORIDE, LIPIDIC CUBIC PHASE, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.12700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.41750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.15100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.41750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.12700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 24.15100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 247 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 ARG A 50 NE CZ NH1 NH2 REMARK 470 GLU A 78 CD OE1 OE2 REMARK 470 GLU A 84 CG CD OE1 OE2 REMARK 470 LYS A 112 CD CE NZ REMARK 470 ARG A 115 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 176 CG CD OE1 OE2 REMARK 470 ARG A 237 CZ NH1 NH2 REMARK 470 GLU A 244 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 164 -79.71 -110.14 REMARK 500 LYS A 226 -65.74 -109.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 DD9 A 309 REMARK 610 D10 A 317 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 713 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 11 OD2 REMARK 620 2 ASP A 46 OD1 25.3 REMARK 620 3 ASP A 46 OD2 24.1 1.4 REMARK 620 4 ASP A 48 OD2 21.4 4.9 3.5 REMARK 620 5 LEU A 240 O 25.0 4.1 3.5 3.7 REMARK 620 6 HOH A 586 O 22.2 3.1 2.0 3.0 4.8 REMARK 620 7 HOH A 589 O 23.0 4.2 3.0 1.6 2.1 3.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 714 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 11 OD1 REMARK 620 2 ASP A 15 OD1 79.1 REMARK 620 3 ARG A 17 O 75.6 102.4 REMARK 620 4 THR A 20 OG1 123.3 141.1 60.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RET A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue R16 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DD9 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue R16 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DD9 A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DD9 A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DD9 A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue D10 A 317 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 713 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 714 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 715 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 716 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 717 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6GUX RELATED DB: PDB DBREF 6GUZ A 7 247 UNP P96787 BACR3_HALSD 7 247 SEQADV 6GUZ PCA A 7 UNP P96787 GLN 7 CONFLICT SEQRES 1 A 241 PCA ALA GLY TYR ASP LEU LEU GLY ASP GLY ARG PRO GLU SEQRES 2 A 241 THR LEU TRP LEU GLY ILE GLY THR LEU LEU MET LEU ILE SEQRES 3 A 241 GLY THR PHE TYR PHE LEU VAL ARG GLY TRP GLY VAL THR SEQRES 4 A 241 ASP LYS ASP ALA ARG GLU TYR TYR ALA VAL THR ILE LEU SEQRES 5 A 241 VAL PRO GLY ILE ALA SER ALA ALA TYR LEU SER MET PHE SEQRES 6 A 241 PHE GLY ILE GLY LEU THR GLU VAL THR VAL GLY GLY GLU SEQRES 7 A 241 MET LEU ASP ILE TYR TYR ALA ARG TYR ALA ASP TRP LEU SEQRES 8 A 241 PHE THR THR PRO LEU LEU LEU LEU ASP LEU ALA LEU LEU SEQRES 9 A 241 ALA LYS VAL ASP ARG VAL THR ILE GLY THR LEU VAL GLY SEQRES 10 A 241 VAL ASP ALA LEU MET ILE VAL THR GLY LEU ILE GLY ALA SEQRES 11 A 241 LEU SER HIS THR ALA ILE ALA ARG TYR SER TRP TRP LEU SEQRES 12 A 241 PHE SER THR ILE CYS MET ILE VAL VAL LEU TYR PHE LEU SEQRES 13 A 241 ALA THR SER LEU ARG SER ALA ALA LYS GLU ARG GLY PRO SEQRES 14 A 241 GLU VAL ALA SER THR PHE ASN THR LEU THR ALA LEU VAL SEQRES 15 A 241 LEU VAL LEU TRP THR ALA TYR PRO ILE LEU TRP ILE ILE SEQRES 16 A 241 GLY THR GLU GLY ALA GLY VAL VAL GLY LEU GLY ILE GLU SEQRES 17 A 241 THR LEU LEU PHE MET VAL LEU ASP VAL THR ALA LYS VAL SEQRES 18 A 241 GLY PHE GLY PHE ILE LEU LEU ARG SER ARG ALA ILE LEU SEQRES 19 A 241 GLY ASP THR GLU ALA PRO GLU MODRES 6GUZ PCA A 7 GLN MODIFIED RESIDUE HET PCA A 7 13 HET RET A 300 96 HET R16 A 302 50 HET DD9 A 303 29 HET R16 A 304 50 HET DD9 A 309 25 HET DD9 A 310 29 HET DD9 A 311 29 HET DD9 A 312 29 HET D10 A 317 28 HET CA A 713 1 HET NA A 714 1 HET CL A 715 1 HET CL A 716 1 HET CL A 717 1 HETNAM PCA PYROGLUTAMIC ACID HETNAM RET RETINAL HETNAM R16 HEXADECANE HETNAM DD9 NONANE HETNAM D10 DECANE HETNAM CA CALCIUM ION HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION FORMUL 1 PCA C5 H7 N O3 FORMUL 2 RET C20 H28 O FORMUL 3 R16 2(C16 H34) FORMUL 4 DD9 5(C9 H20) FORMUL 10 D10 C10 H22 FORMUL 11 CA CA 2+ FORMUL 12 NA NA 1+ FORMUL 13 CL 3(CL 1-) FORMUL 16 HOH *56(H2 O) HELIX 1 AA1 GLU A 19 TRP A 42 1 24 HELIX 2 AA2 ASP A 46 PHE A 72 1 27 HELIX 3 AA3 TYR A 90 LYS A 112 1 23 HELIX 4 AA4 ASP A 114 LEU A 137 1 24 HELIX 5 AA5 THR A 140 THR A 164 1 25 HELIX 6 AA6 THR A 164 GLU A 172 1 9 HELIX 7 AA7 GLY A 174 GLY A 202 1 29 HELIX 8 AA8 GLY A 210 ARG A 235 1 26 HELIX 9 AA9 SER A 236 GLY A 241 5 6 SHEET 1 AA1 2 LEU A 76 THR A 80 0 SHEET 2 AA1 2 MET A 85 TYR A 89 -1 O LEU A 86 N VAL A 79 LINK C PCA A 7 N ALA A 8 1555 1555 1.34 LINK NZ LYS A 226 C15ARET A 300 1555 1555 1.26 LINK NZ LYS A 226 C15BRET A 300 1555 1555 1.25 LINK OD2 ASP A 11 CA CA A 713 1555 2555 2.38 LINK OD1 ASP A 11 NA NA A 714 1555 1555 2.60 LINK OD1 ASP A 15 NA NA A 714 1555 1555 2.64 LINK O ARG A 17 NA NA A 714 1555 1555 3.19 LINK OG1 THR A 20 NA NA A 714 1555 1555 2.69 LINK OD1 ASP A 46 CA CA A 713 1555 1555 2.42 LINK OD2 ASP A 46 CA CA A 713 1555 1555 2.75 LINK OD2 ASP A 48 CA CA A 713 1555 1555 2.52 LINK O LEU A 240 CA CA A 713 1555 1555 2.30 LINK O HOH A 586 CA CA A 713 1555 1555 2.53 LINK O HOH A 589 CA CA A 713 1555 1555 2.41 SITE 1 AC1 11 TRP A 96 THR A 99 THR A 100 TRP A 148 SITE 2 AC1 11 SER A 151 THR A 152 TRP A 192 TYR A 195 SITE 3 AC1 11 TRP A 199 ASP A 222 LYS A 226 SITE 1 AC2 4 THR A 120 GLY A 123 VAL A 223 DD9 A 311 SITE 1 AC3 1 D10 A 317 SITE 1 AC4 2 ILE A 32 PHE A 231 SITE 1 AC5 2 LEU A 28 LEU A 68 SITE 1 AC6 1 LEU A 68 SITE 1 AC7 1 R16 A 302 SITE 1 AC8 1 DD9 A 303 SITE 1 AC9 6 ASP A 11 ASP A 46 ASP A 48 LEU A 240 SITE 2 AC9 6 HOH A 586 HOH A 589 SITE 1 AD1 6 ASP A 11 LEU A 12 LEU A 13 ASP A 15 SITE 2 AD1 6 ARG A 17 THR A 20 SITE 1 AD2 5 ALA A 8 GLY A 210 GLY A 212 ILE A 213 SITE 2 AD2 5 PRO A 246 SITE 1 AD3 2 LYS A 47 HOH A 575 SITE 1 AD4 2 THR A 45 ASP A 46 CRYST1 46.254 48.302 104.835 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021620 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020703 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009539 0.00000 CONECT 1 2 5 CONECT 2 1 3 7 9 CONECT 3 2 4 10 11 CONECT 4 3 5 12 13 CONECT 5 1 4 6 CONECT 6 5 CONECT 7 2 8 14 CONECT 8 7 CONECT 9 2 CONECT 10 3 CONECT 11 3 CONECT 12 4 CONECT 13 4 CONECT 14 7 CONECT 58 4156 CONECT 115 4156 CONECT 131 4156 CONECT 186 4156 CONECT 601 4155 CONECT 602 4155 CONECT 621 4155 CONECT 3480 3818 3819 CONECT 3709 4155 CONECT 3790 3792 3800 3820 3822 CONECT 3791 3793 3801 3821 3823 CONECT 3792 3790 3794 3830 3832 CONECT 3793 3791 3795 3831 3833 CONECT 3794 3792 3796 3834 3836 CONECT 3795 3793 3797 3835 3837 CONECT 3796 3794 3798 3838 3840 CONECT 3797 3795 3799 3839 3841 CONECT 3798 3796 3800 3824 CONECT 3799 3797 3801 3825 CONECT 3800 3790 3798 3802 CONECT 3801 3791 3799 3803 CONECT 3802 3800 3804 3842 CONECT 3803 3801 3805 3843 CONECT 3804 3802 3806 3844 CONECT 3805 3803 3807 3845 CONECT 3806 3804 3808 3826 CONECT 3807 3805 3809 3827 CONECT 3808 3806 3810 3846 CONECT 3809 3807 3811 3847 CONECT 3810 3808 3812 3848 CONECT 3811 3809 3813 3849 CONECT 3812 3810 3814 3850 CONECT 3813 3811 3815 3851 CONECT 3814 3812 3816 3828 CONECT 3815 3813 3817 3829 CONECT 3816 3814 3818 3852 CONECT 3817 3815 3819 3853 CONECT 3818 3480 3816 3854 CONECT 3819 3480 3817 3855 CONECT 3820 3790 3856 3858 3860 CONECT 3821 3791 3857 3859 3861 CONECT 3822 3790 3862 3864 3866 CONECT 3823 3791 3863 3865 3867 CONECT 3824 3798 3868 3870 3872 CONECT 3825 3799 3869 3871 3873 CONECT 3826 3806 3874 3876 3878 CONECT 3827 3807 3875 3877 3879 CONECT 3828 3814 3880 3882 3884 CONECT 3829 3815 3881 3883 3885 CONECT 3830 3792 CONECT 3831 3793 CONECT 3832 3792 CONECT 3833 3793 CONECT 3834 3794 CONECT 3835 3795 CONECT 3836 3794 CONECT 3837 3795 CONECT 3838 3796 CONECT 3839 3797 CONECT 3840 3796 CONECT 3841 3797 CONECT 3842 3802 CONECT 3843 3803 CONECT 3844 3804 CONECT 3845 3805 CONECT 3846 3808 CONECT 3847 3809 CONECT 3848 3810 CONECT 3849 3811 CONECT 3850 3812 CONECT 3851 3813 CONECT 3852 3816 CONECT 3853 3817 CONECT 3854 3818 CONECT 3855 3819 CONECT 3856 3820 CONECT 3857 3821 CONECT 3858 3820 CONECT 3859 3821 CONECT 3860 3820 CONECT 3861 3821 CONECT 3862 3822 CONECT 3863 3823 CONECT 3864 3822 CONECT 3865 3823 CONECT 3866 3822 CONECT 3867 3823 CONECT 3868 3824 CONECT 3869 3825 CONECT 3870 3824 CONECT 3871 3825 CONECT 3872 3824 CONECT 3873 3825 CONECT 3874 3826 CONECT 3875 3827 CONECT 3876 3826 CONECT 3877 3827 CONECT 3878 3826 CONECT 3879 3827 CONECT 3880 3828 CONECT 3881 3829 CONECT 3882 3828 CONECT 3883 3829 CONECT 3884 3828 CONECT 3885 3829 CONECT 3886 3887 3902 3903 3904 CONECT 3887 3886 3888 3905 3906 CONECT 3888 3887 3889 3907 3908 CONECT 3889 3888 3890 3909 3910 CONECT 3890 3889 3891 3911 3912 CONECT 3891 3890 3892 3913 3914 CONECT 3892 3891 3893 3915 3916 CONECT 3893 3892 3894 3917 3918 CONECT 3894 3893 3895 3919 3920 CONECT 3895 3894 3896 3921 3922 CONECT 3896 3895 3897 3923 3924 CONECT 3897 3896 3898 3925 3926 CONECT 3898 3897 3899 3927 3928 CONECT 3899 3898 3900 3929 3930 CONECT 3900 3899 3901 3931 3932 CONECT 3901 3900 3933 3934 3935 CONECT 3902 3886 CONECT 3903 3886 CONECT 3904 3886 CONECT 3905 3887 CONECT 3906 3887 CONECT 3907 3888 CONECT 3908 3888 CONECT 3909 3889 CONECT 3910 3889 CONECT 3911 3890 CONECT 3912 3890 CONECT 3913 3891 CONECT 3914 3891 CONECT 3915 3892 CONECT 3916 3892 CONECT 3917 3893 CONECT 3918 3893 CONECT 3919 3894 CONECT 3920 3894 CONECT 3921 3895 CONECT 3922 3895 CONECT 3923 3896 CONECT 3924 3896 CONECT 3925 3897 CONECT 3926 3897 CONECT 3927 3898 CONECT 3928 3898 CONECT 3929 3899 CONECT 3930 3899 CONECT 3931 3900 CONECT 3932 3900 CONECT 3933 3901 CONECT 3934 3901 CONECT 3935 3901 CONECT 3936 3937 3945 3946 3947 CONECT 3937 3936 3938 3948 3949 CONECT 3938 3937 3939 3950 3951 CONECT 3939 3938 3940 3952 3953 CONECT 3940 3939 3941 3954 3955 CONECT 3941 3940 3942 3956 3957 CONECT 3942 3941 3943 3958 3959 CONECT 3943 3942 3944 3960 3961 CONECT 3944 3943 3962 3963 3964 CONECT 3945 3936 CONECT 3946 3936 CONECT 3947 3936 CONECT 3948 3937 CONECT 3949 3937 CONECT 3950 3938 CONECT 3951 3938 CONECT 3952 3939 CONECT 3953 3939 CONECT 3954 3940 CONECT 3955 3940 CONECT 3956 3941 CONECT 3957 3941 CONECT 3958 3942 CONECT 3959 3942 CONECT 3960 3943 CONECT 3961 3943 CONECT 3962 3944 CONECT 3963 3944 CONECT 3964 3944 CONECT 3965 3966 3981 3982 3983 CONECT 3966 3965 3967 3984 3985 CONECT 3967 3966 3968 3986 3987 CONECT 3968 3967 3969 3988 3989 CONECT 3969 3968 3970 3990 3991 CONECT 3970 3969 3971 3992 3993 CONECT 3971 3970 3972 3994 3995 CONECT 3972 3971 3973 3996 3997 CONECT 3973 3972 3974 3998 3999 CONECT 3974 3973 3975 4000 4001 CONECT 3975 3974 3976 4002 4003 CONECT 3976 3975 3977 4004 4005 CONECT 3977 3976 3978 4006 4007 CONECT 3978 3977 3979 4008 4009 CONECT 3979 3978 3980 4010 4011 CONECT 3980 3979 4012 4013 4014 CONECT 3981 3965 CONECT 3982 3965 CONECT 3983 3965 CONECT 3984 3966 CONECT 3985 3966 CONECT 3986 3967 CONECT 3987 3967 CONECT 3988 3968 CONECT 3989 3968 CONECT 3990 3969 CONECT 3991 3969 CONECT 3992 3970 CONECT 3993 3970 CONECT 3994 3971 CONECT 3995 3971 CONECT 3996 3972 CONECT 3997 3972 CONECT 3998 3973 CONECT 3999 3973 CONECT 4000 3974 CONECT 4001 3974 CONECT 4002 3975 CONECT 4003 3975 CONECT 4004 3976 CONECT 4005 3976 CONECT 4006 3977 CONECT 4007 3977 CONECT 4008 3978 CONECT 4009 3978 CONECT 4010 3979 CONECT 4011 3979 CONECT 4012 3980 CONECT 4013 3980 CONECT 4014 3980 CONECT 4015 4016 4023 4024 CONECT 4016 4015 4017 4025 4026 CONECT 4017 4016 4018 4027 4028 CONECT 4018 4017 4019 4029 4030 CONECT 4019 4018 4020 4031 4032 CONECT 4020 4019 4021 4033 4034 CONECT 4021 4020 4022 4035 4036 CONECT 4022 4021 4037 4038 4039 CONECT 4023 4015 CONECT 4024 4015 CONECT 4025 4016 CONECT 4026 4016 CONECT 4027 4017 CONECT 4028 4017 CONECT 4029 4018 CONECT 4030 4018 CONECT 4031 4019 CONECT 4032 4019 CONECT 4033 4020 CONECT 4034 4020 CONECT 4035 4021 CONECT 4036 4021 CONECT 4037 4022 CONECT 4038 4022 CONECT 4039 4022 CONECT 4040 4041 4049 4050 4051 CONECT 4041 4040 4042 4052 4053 CONECT 4042 4041 4043 4054 4055 CONECT 4043 4042 4044 4056 4057 CONECT 4044 4043 4045 4058 4059 CONECT 4045 4044 4046 4060 4061 CONECT 4046 4045 4047 4062 4063 CONECT 4047 4046 4048 4064 4065 CONECT 4048 4047 4066 4067 4068 CONECT 4049 4040 CONECT 4050 4040 CONECT 4051 4040 CONECT 4052 4041 CONECT 4053 4041 CONECT 4054 4042 CONECT 4055 4042 CONECT 4056 4043 CONECT 4057 4043 CONECT 4058 4044 CONECT 4059 4044 CONECT 4060 4045 CONECT 4061 4045 CONECT 4062 4046 CONECT 4063 4046 CONECT 4064 4047 CONECT 4065 4047 CONECT 4066 4048 CONECT 4067 4048 CONECT 4068 4048 CONECT 4069 4070 4078 4079 4080 CONECT 4070 4069 4071 4081 4082 CONECT 4071 4070 4072 4083 4084 CONECT 4072 4071 4073 4085 4086 CONECT 4073 4072 4074 4087 4088 CONECT 4074 4073 4075 4089 4090 CONECT 4075 4074 4076 4091 4092 CONECT 4076 4075 4077 4093 4094 CONECT 4077 4076 4095 4096 4097 CONECT 4078 4069 CONECT 4079 4069 CONECT 4080 4069 CONECT 4081 4070 CONECT 4082 4070 CONECT 4083 4071 CONECT 4084 4071 CONECT 4085 4072 CONECT 4086 4072 CONECT 4087 4073 CONECT 4088 4073 CONECT 4089 4074 CONECT 4090 4074 CONECT 4091 4075 CONECT 4092 4075 CONECT 4093 4076 CONECT 4094 4076 CONECT 4095 4077 CONECT 4096 4077 CONECT 4097 4077 CONECT 4098 4099 4107 4108 4109 CONECT 4099 4098 4100 4110 4111 CONECT 4100 4099 4101 4112 4113 CONECT 4101 4100 4102 4114 4115 CONECT 4102 4101 4103 4116 4117 CONECT 4103 4102 4104 4118 4119 CONECT 4104 4103 4105 4120 4121 CONECT 4105 4104 4106 4122 4123 CONECT 4106 4105 4124 4125 4126 CONECT 4107 4098 CONECT 4108 4098 CONECT 4109 4098 CONECT 4110 4099 CONECT 4111 4099 CONECT 4112 4100 CONECT 4113 4100 CONECT 4114 4101 CONECT 4115 4101 CONECT 4116 4102 CONECT 4117 4102 CONECT 4118 4103 CONECT 4119 4103 CONECT 4120 4104 CONECT 4121 4104 CONECT 4122 4105 CONECT 4123 4105 CONECT 4124 4106 CONECT 4125 4106 CONECT 4126 4106 CONECT 4127 4128 4136 4137 CONECT 4128 4127 4129 4138 4139 CONECT 4129 4128 4130 4140 4141 CONECT 4130 4129 4131 4142 4143 CONECT 4131 4130 4132 4144 4145 CONECT 4132 4131 4133 4146 4147 CONECT 4133 4132 4134 4148 4149 CONECT 4134 4133 4135 4150 4151 CONECT 4135 4134 4152 4153 4154 CONECT 4136 4127 CONECT 4137 4127 CONECT 4138 4128 CONECT 4139 4128 CONECT 4140 4129 CONECT 4141 4129 CONECT 4142 4130 CONECT 4143 4130 CONECT 4144 4131 CONECT 4145 4131 CONECT 4146 4132 CONECT 4147 4132 CONECT 4148 4133 CONECT 4149 4133 CONECT 4150 4134 CONECT 4151 4134 CONECT 4152 4135 CONECT 4153 4135 CONECT 4154 4135 CONECT 4155 601 602 621 3709 CONECT 4155 4177 4180 CONECT 4156 58 115 131 186 CONECT 4177 4155 CONECT 4180 4155 MASTER 371 0 15 9 2 0 18 6 1969 1 393 19 END