HEADER VIRAL PROTEIN 21-JUN-18 6GW1 TITLE GII.10 HUMAN NOROVIRUS PROTRUDING DOMAIN IN COMPLEX WITH TITLE 2 GLYCOCHENODEOXYCHOLATE (GCDCA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NORWALK VIRUS; SOURCE 3 ORGANISM_TAXID: 11983; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS NOROVIRUS, GII.10, P DOMAIN, GCDCA, HBGA, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.KILIC,G.S.HANSMAN REVDAT 4 17-JAN-24 6GW1 1 REMARK REVDAT 3 16-JAN-19 6GW1 1 JRNL REVDAT 2 07-NOV-18 6GW1 1 JRNL REVDAT 1 17-OCT-18 6GW1 0 JRNL AUTH T.KILIC,A.KOROMYSLOVA,G.S.HANSMAN JRNL TITL STRUCTURAL BASIS FOR HUMAN NOROVIRUS CAPSID BINDING TO BILE JRNL TITL 2 ACIDS. JRNL REF J. VIROL. V. 93 2019 JRNL REFN ESSN 1098-5514 JRNL PMID 30355683 JRNL DOI 10.1128/JVI.01581-18 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 60113 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3006 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.9300 - 5.2320 0.99 2919 154 0.1662 0.1992 REMARK 3 2 5.2320 - 4.1536 1.00 2799 148 0.1233 0.1215 REMARK 3 3 4.1536 - 3.6288 1.00 2773 145 0.1447 0.1744 REMARK 3 4 3.6288 - 3.2972 1.00 2768 146 0.1596 0.1757 REMARK 3 5 3.2972 - 3.0609 1.00 2743 145 0.1729 0.1960 REMARK 3 6 3.0609 - 2.8805 1.00 2755 145 0.1753 0.2108 REMARK 3 7 2.8805 - 2.7362 1.00 2711 142 0.1820 0.1985 REMARK 3 8 2.7362 - 2.6171 1.00 2740 144 0.1824 0.2123 REMARK 3 9 2.6171 - 2.5164 1.00 2723 144 0.1777 0.2084 REMARK 3 10 2.5164 - 2.4295 1.00 2693 142 0.1682 0.1929 REMARK 3 11 2.4295 - 2.3536 1.00 2723 143 0.1677 0.2102 REMARK 3 12 2.3536 - 2.2863 0.99 2698 142 0.1708 0.1867 REMARK 3 13 2.2863 - 2.2261 1.00 2708 142 0.1719 0.2284 REMARK 3 14 2.2261 - 2.1718 1.00 2701 142 0.1739 0.2202 REMARK 3 15 2.1718 - 2.1224 1.00 2699 143 0.1752 0.1960 REMARK 3 16 2.1224 - 2.0773 1.00 2681 141 0.1808 0.1966 REMARK 3 17 2.0773 - 2.0357 1.00 2679 141 0.1867 0.2266 REMARK 3 18 2.0357 - 1.9973 1.00 2705 142 0.1970 0.2192 REMARK 3 19 1.9973 - 1.9616 0.99 2713 143 0.2131 0.2718 REMARK 3 20 1.9616 - 1.9284 0.99 2646 139 0.2191 0.2323 REMARK 3 21 1.9284 - 1.9000 0.94 2530 133 0.2323 0.2887 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4964 REMARK 3 ANGLE : 0.750 6837 REMARK 3 CHIRALITY : 0.053 780 REMARK 3 PLANARITY : 0.005 895 REMARK 3 DIHEDRAL : 11.826 2912 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 226 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.2760 9.4498 -8.6278 REMARK 3 T TENSOR REMARK 3 T11: 0.2052 T22: 0.2362 REMARK 3 T33: 0.1774 T12: 0.0235 REMARK 3 T13: -0.0332 T23: -0.0202 REMARK 3 L TENSOR REMARK 3 L11: 2.0781 L22: 3.2322 REMARK 3 L33: 3.1530 L12: -0.3012 REMARK 3 L13: 0.9842 L23: 0.0546 REMARK 3 S TENSOR REMARK 3 S11: -0.0120 S12: -0.3523 S13: 0.1522 REMARK 3 S21: 0.3068 S22: 0.0138 S23: -0.1362 REMARK 3 S31: -0.1141 S32: 0.0334 S33: 0.0145 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 267 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.8736 -4.0914 -17.7067 REMARK 3 T TENSOR REMARK 3 T11: 0.2030 T22: 0.1831 REMARK 3 T33: 0.2025 T12: 0.0527 REMARK 3 T13: -0.0013 T23: 0.0142 REMARK 3 L TENSOR REMARK 3 L11: 4.5326 L22: 5.0563 REMARK 3 L33: 2.3196 L12: 3.9255 REMARK 3 L13: 1.9662 L23: 1.3318 REMARK 3 S TENSOR REMARK 3 S11: -0.0489 S12: -0.0796 S13: -0.2343 REMARK 3 S21: 0.0161 S22: 0.1255 S23: -0.0273 REMARK 3 S31: 0.0699 S32: 0.1033 S33: -0.1038 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 295 THROUGH 327 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.5647 -10.3844 -16.9511 REMARK 3 T TENSOR REMARK 3 T11: 0.3080 T22: 0.1937 REMARK 3 T33: 0.2712 T12: 0.0228 REMARK 3 T13: 0.0076 T23: 0.0713 REMARK 3 L TENSOR REMARK 3 L11: 3.8531 L22: 2.9534 REMARK 3 L33: 2.4690 L12: 0.1082 REMARK 3 L13: 0.4002 L23: 0.8259 REMARK 3 S TENSOR REMARK 3 S11: -0.0579 S12: -0.1075 S13: -0.2931 REMARK 3 S21: 0.2323 S22: 0.1443 S23: 0.1055 REMARK 3 S31: 0.2788 S32: -0.0082 S33: -0.0625 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 328 THROUGH 354 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.1311 -2.8035 -25.5060 REMARK 3 T TENSOR REMARK 3 T11: 0.1201 T22: 0.1654 REMARK 3 T33: 0.2274 T12: -0.0168 REMARK 3 T13: 0.0238 T23: 0.0307 REMARK 3 L TENSOR REMARK 3 L11: 3.4675 L22: 2.3619 REMARK 3 L33: 4.8178 L12: -0.1735 REMARK 3 L13: 2.0093 L23: -0.8716 REMARK 3 S TENSOR REMARK 3 S11: 0.1106 S12: 0.1766 S13: -0.2997 REMARK 3 S21: -0.1399 S22: 0.1706 S23: 0.0892 REMARK 3 S31: 0.2408 S32: -0.0902 S33: -0.2242 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 355 THROUGH 409 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.6150 -3.5415 -16.0082 REMARK 3 T TENSOR REMARK 3 T11: 0.1805 T22: 0.2621 REMARK 3 T33: 0.2560 T12: 0.0012 REMARK 3 T13: 0.0216 T23: 0.0824 REMARK 3 L TENSOR REMARK 3 L11: 1.7774 L22: 2.2703 REMARK 3 L33: 2.1776 L12: 0.1325 REMARK 3 L13: 0.8670 L23: 0.6413 REMARK 3 S TENSOR REMARK 3 S11: -0.0168 S12: -0.1968 S13: -0.2796 REMARK 3 S21: 0.0933 S22: 0.0853 S23: 0.2623 REMARK 3 S31: 0.1035 S32: -0.3051 S33: -0.0684 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 410 THROUGH 455 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.6978 2.9758 -3.1555 REMARK 3 T TENSOR REMARK 3 T11: 0.2844 T22: 0.3190 REMARK 3 T33: 0.1809 T12: 0.0650 REMARK 3 T13: -0.0221 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 1.7754 L22: 1.6752 REMARK 3 L33: 1.1814 L12: 0.3968 REMARK 3 L13: 0.1267 L23: 0.0334 REMARK 3 S TENSOR REMARK 3 S11: -0.0480 S12: -0.4441 S13: -0.1596 REMARK 3 S21: 0.3949 S22: 0.0985 S23: -0.2127 REMARK 3 S31: 0.0636 S32: -0.0523 S33: -0.0481 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 456 THROUGH 472 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.7158 6.7261 -14.3843 REMARK 3 T TENSOR REMARK 3 T11: 0.2002 T22: 0.2445 REMARK 3 T33: 0.2558 T12: 0.0249 REMARK 3 T13: -0.0455 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 5.6920 L22: 4.6227 REMARK 3 L33: 6.6318 L12: -1.1508 REMARK 3 L13: -2.8599 L23: 1.5044 REMARK 3 S TENSOR REMARK 3 S11: 0.0022 S12: 0.0614 S13: -0.0017 REMARK 3 S21: 0.0095 S22: 0.1037 S23: -0.3553 REMARK 3 S31: -0.0376 S32: 0.1850 S33: -0.0942 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 473 THROUGH 521 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3513 15.5821 -4.4108 REMARK 3 T TENSOR REMARK 3 T11: 0.2607 T22: 0.3170 REMARK 3 T33: 0.2792 T12: 0.0054 REMARK 3 T13: -0.0830 T23: -0.1092 REMARK 3 L TENSOR REMARK 3 L11: 4.2542 L22: 4.7369 REMARK 3 L33: 4.1614 L12: -0.7702 REMARK 3 L13: 0.5648 L23: 0.5629 REMARK 3 S TENSOR REMARK 3 S11: 0.0479 S12: -0.0990 S13: 0.3094 REMARK 3 S21: -0.0135 S22: 0.0677 S23: -0.4874 REMARK 3 S31: -0.1803 S32: 0.4175 S33: -0.1335 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 522 THROUGH 538 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.1920 14.9372 -2.2627 REMARK 3 T TENSOR REMARK 3 T11: 0.2733 T22: 0.4581 REMARK 3 T33: 0.4911 T12: -0.0029 REMARK 3 T13: -0.0995 T23: -0.1747 REMARK 3 L TENSOR REMARK 3 L11: 2.8223 L22: 2.0279 REMARK 3 L33: 8.0578 L12: 0.1162 REMARK 3 L13: 0.5425 L23: 3.8986 REMARK 3 S TENSOR REMARK 3 S11: -0.0557 S12: -0.2523 S13: 0.4124 REMARK 3 S21: 0.3237 S22: 0.4177 S23: -0.6813 REMARK 3 S31: 0.1302 S32: 0.8787 S33: -0.3157 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 225 THROUGH 332 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.2739 16.0947 -30.9886 REMARK 3 T TENSOR REMARK 3 T11: 0.2406 T22: 0.1926 REMARK 3 T33: 0.2153 T12: 0.0120 REMARK 3 T13: -0.0212 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 2.5734 L22: 1.5355 REMARK 3 L33: 1.2592 L12: -0.9513 REMARK 3 L13: -0.9007 L23: 0.1729 REMARK 3 S TENSOR REMARK 3 S11: 0.0082 S12: 0.0625 S13: 0.1571 REMARK 3 S21: -0.0855 S22: 0.0165 S23: -0.0425 REMARK 3 S31: -0.0860 S32: -0.0287 S33: -0.0361 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 333 THROUGH 455 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.6368 15.0624 -31.3703 REMARK 3 T TENSOR REMARK 3 T11: 0.1971 T22: 0.2135 REMARK 3 T33: 0.2092 T12: 0.0298 REMARK 3 T13: -0.0155 T23: 0.0207 REMARK 3 L TENSOR REMARK 3 L11: 1.5202 L22: 1.0956 REMARK 3 L33: 0.9411 L12: -0.0444 REMARK 3 L13: -0.3085 L23: -0.1412 REMARK 3 S TENSOR REMARK 3 S11: -0.0051 S12: 0.0550 S13: 0.2047 REMARK 3 S21: -0.0566 S22: 0.0894 S23: 0.1219 REMARK 3 S31: -0.1291 S32: -0.1681 S33: -0.0931 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 456 THROUGH 538 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1663 4.9714 -38.3902 REMARK 3 T TENSOR REMARK 3 T11: 0.2306 T22: 0.1998 REMARK 3 T33: 0.3064 T12: -0.0011 REMARK 3 T13: 0.0570 T23: -0.0139 REMARK 3 L TENSOR REMARK 3 L11: 3.2763 L22: 2.4103 REMARK 3 L33: 1.6747 L12: -0.1413 REMARK 3 L13: -0.7465 L23: 0.1892 REMARK 3 S TENSOR REMARK 3 S11: -0.0369 S12: 0.1370 S13: -0.2075 REMARK 3 S21: -0.2096 S22: -0.0192 S23: -0.3632 REMARK 3 S31: 0.0744 S32: 0.0568 S33: 0.0267 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GW1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1200010636. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.972640 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION NOV 1, 2016 REMARK 200 DATA SCALING SOFTWARE : XSCALE VERSION NOV 1, 2016 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60120 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 45.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.06655 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.8900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.65550 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.490 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3ONU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0,1M MAGNESIUM ACETATE TETRAHYDRATE REMARK 280 0,1M SODIUM CITRATE PH 5.8 14% W/V PEG 5000 MME, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 53.92500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.83500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 53.92500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.83500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 225 REMARK 465 VAL A 346 REMARK 465 PRO A 347 REMARK 465 GLY A 348 REMARK 465 GLU A 349 REMARK 465 VAL B 346 REMARK 465 PRO B 347 REMARK 465 GLY B 348 REMARK 465 GLU B 349 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 231 CG1 CG2 CD1 REMARK 470 ASN A 254 CG OD1 ND2 REMARK 470 GLN A 295 CG CD OE1 NE2 REMARK 470 GLU A 297 CG CD OE1 OE2 REMARK 470 GLU A 319 CG CD OE1 OE2 REMARK 470 ASP A 320 CG OD1 OD2 REMARK 470 VAL A 433 CG1 CG2 REMARK 470 GLU A 489 CG CD OE1 OE2 REMARK 470 ARG A 492 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 501 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 531 CG CD OE1 NE2 REMARK 470 PHE A 532 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 289 CG CD CE NZ REMARK 470 GLN B 295 CG CD OE1 NE2 REMARK 470 GLU B 297 CG CD OE1 OE2 REMARK 470 ARG B 299 CG CD NE CZ NH1 NH2 REMARK 470 THR B 345 OG1 CG2 REMARK 470 ASN B 351 CG OD1 ND2 REMARK 470 VAL B 433 CG1 CG2 REMARK 470 GLU B 489 CG CD OE1 OE2 REMARK 470 ASN B 510 CG OD1 ND2 REMARK 470 GLN B 531 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 260 48.84 -146.92 REMARK 500 ALA A 323 170.76 179.27 REMARK 500 GLN A 384 -23.31 -145.69 REMARK 500 ASP A 385 56.68 -90.42 REMARK 500 VAL A 529 -168.65 -124.30 REMARK 500 GLN B 260 49.05 -147.80 REMARK 500 ALA B 323 171.64 179.29 REMARK 500 GLN B 384 -32.25 -137.58 REMARK 500 ASP B 385 56.92 -94.59 REMARK 500 VAL B 529 -166.93 -127.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 859 DISTANCE = 5.92 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 CHO A 601 REMARK 610 CHO B 601 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 600 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 275 OG1 REMARK 620 2 THR A 327 O 83.4 REMARK 620 3 PRO A 328 O 149.5 66.3 REMARK 620 4 TYR A 416 OH 124.8 151.1 85.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 600 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 275 OG1 REMARK 620 2 THR B 327 O 83.0 REMARK 620 3 PRO B 328 O 146.1 63.2 REMARK 620 4 TYR B 416 OH 128.9 147.0 84.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CHO A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CHO B 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6GVZ RELATED DB: PDB REMARK 900 GII.1 WITH GCDCA REMARK 900 RELATED ID: 6GW0 RELATED DB: PDB REMARK 900 GII.1 WITH TCDCA DBREF 6GW1 A 225 538 UNP Q5F4T5 Q5F4T5_9CALI 225 538 DBREF 6GW1 B 225 538 UNP Q5F4T5 Q5F4T5_9CALI 225 538 SEQRES 1 A 314 LYS PRO PHE THR LEU PRO ILE LEU THR LEU GLY GLU LEU SEQRES 2 A 314 THR ASN SER ARG PHE PRO LEU PRO ILE ASP VAL LEU TYR SEQRES 3 A 314 THR ASN PRO ASN GLU SER ALA ILE VAL GLN CYS GLN ASN SEQRES 4 A 314 GLY ARG CYS THR LEU ASP GLY GLU LEU GLN GLY THR THR SEQRES 5 A 314 GLN LEU LEU PRO THR GLY ILE CYS ALA PHE ARG GLY LYS SEQRES 6 A 314 VAL THR GLN GLN VAL GLN ASP GLU HIS ARG GLY THR HIS SEQRES 7 A 314 TRP ASN MET THR VAL THR ASN LEU ASN GLY THR PRO PHE SEQRES 8 A 314 ASP PRO THR GLU ASP VAL PRO ALA PRO LEU GLY THR PRO SEQRES 9 A 314 ASP PHE SER GLY GLN ILE TYR GLY VAL ILE SER GLN ARG SEQRES 10 A 314 ASN THR ASN THR VAL PRO GLY GLU GLY ASN LEU PRO ALA SEQRES 11 A 314 ASN ARG ALA HIS GLU ALA VAL ILE ALA THR TYR SER PRO SEQRES 12 A 314 LYS PHE THR PRO LYS LEU GLY ASN ILE GLN PHE SER THR SEQRES 13 A 314 TRP GLU THR GLN ASP VAL SER SER GLY GLN PRO THR LYS SEQRES 14 A 314 PHE THR PRO VAL GLY LEU ALA SER VAL ASP ALA ASN SER SEQRES 15 A 314 HIS PHE ASP GLN TRP THR LEU PRO SER TYR SER GLY ALA SEQRES 16 A 314 LEU THR LEU ASN MET ASN LEU ALA PRO SER VAL ALA PRO SEQRES 17 A 314 VAL PHE PRO GLY GLU CYS LEU LEU PHE PHE ARG SER PHE SEQRES 18 A 314 ILE PRO LEU LYS GLY GLY TYR GLY ASN PRO ALA ILE ASP SEQRES 19 A 314 CYS LEU MET PRO GLN GLU TRP VAL GLN HIS LEU TYR GLN SEQRES 20 A 314 GLU SER ALA PRO SER LEU SER ASP VAL ALA LEU VAL ARG SEQRES 21 A 314 TYR VAL ASN PRO GLU THR GLY ARG THR LEU PHE GLU ALA SEQRES 22 A 314 LYS LEU HIS ARG ASN GLY PHE LEU THR VAL ALA ARG ASN SEQRES 23 A 314 SER ALA GLY PRO VAL VAL ALA PRO THR ASN GLY TYR PHE SEQRES 24 A 314 ARG PHE ASP SER TRP VAL ASN GLN PHE TYR THR LEU ALA SEQRES 25 A 314 PRO MET SEQRES 1 B 314 LYS PRO PHE THR LEU PRO ILE LEU THR LEU GLY GLU LEU SEQRES 2 B 314 THR ASN SER ARG PHE PRO LEU PRO ILE ASP VAL LEU TYR SEQRES 3 B 314 THR ASN PRO ASN GLU SER ALA ILE VAL GLN CYS GLN ASN SEQRES 4 B 314 GLY ARG CYS THR LEU ASP GLY GLU LEU GLN GLY THR THR SEQRES 5 B 314 GLN LEU LEU PRO THR GLY ILE CYS ALA PHE ARG GLY LYS SEQRES 6 B 314 VAL THR GLN GLN VAL GLN ASP GLU HIS ARG GLY THR HIS SEQRES 7 B 314 TRP ASN MET THR VAL THR ASN LEU ASN GLY THR PRO PHE SEQRES 8 B 314 ASP PRO THR GLU ASP VAL PRO ALA PRO LEU GLY THR PRO SEQRES 9 B 314 ASP PHE SER GLY GLN ILE TYR GLY VAL ILE SER GLN ARG SEQRES 10 B 314 ASN THR ASN THR VAL PRO GLY GLU GLY ASN LEU PRO ALA SEQRES 11 B 314 ASN ARG ALA HIS GLU ALA VAL ILE ALA THR TYR SER PRO SEQRES 12 B 314 LYS PHE THR PRO LYS LEU GLY ASN ILE GLN PHE SER THR SEQRES 13 B 314 TRP GLU THR GLN ASP VAL SER SER GLY GLN PRO THR LYS SEQRES 14 B 314 PHE THR PRO VAL GLY LEU ALA SER VAL ASP ALA ASN SER SEQRES 15 B 314 HIS PHE ASP GLN TRP THR LEU PRO SER TYR SER GLY ALA SEQRES 16 B 314 LEU THR LEU ASN MET ASN LEU ALA PRO SER VAL ALA PRO SEQRES 17 B 314 VAL PHE PRO GLY GLU CYS LEU LEU PHE PHE ARG SER PHE SEQRES 18 B 314 ILE PRO LEU LYS GLY GLY TYR GLY ASN PRO ALA ILE ASP SEQRES 19 B 314 CYS LEU MET PRO GLN GLU TRP VAL GLN HIS LEU TYR GLN SEQRES 20 B 314 GLU SER ALA PRO SER LEU SER ASP VAL ALA LEU VAL ARG SEQRES 21 B 314 TYR VAL ASN PRO GLU THR GLY ARG THR LEU PHE GLU ALA SEQRES 22 B 314 LYS LEU HIS ARG ASN GLY PHE LEU THR VAL ALA ARG ASN SEQRES 23 B 314 SER ALA GLY PRO VAL VAL ALA PRO THR ASN GLY TYR PHE SEQRES 24 B 314 ARG PHE ASP SER TRP VAL ASN GLN PHE TYR THR LEU ALA SEQRES 25 B 314 PRO MET HET NA A 600 1 HET CHO A 601 28 HET NA B 600 1 HET CHO B 601 28 HETNAM NA SODIUM ION HETNAM CHO GLYCOCHENODEOXYCHOLIC ACID FORMUL 3 NA 2(NA 1+) FORMUL 4 CHO 2(C26 H43 N O5) FORMUL 7 HOH *344(H2 O) HELIX 1 AA1 THR A 233 LEU A 237 5 5 HELIX 2 AA2 LEU A 279 ILE A 283 5 5 HELIX 3 AA3 THR A 370 LEU A 373 5 4 HELIX 4 AA4 PRO A 462 SER A 473 1 12 HELIX 5 AA5 THR B 233 LEU B 237 5 5 HELIX 6 AA6 LEU B 279 ILE B 283 5 5 HELIX 7 AA7 THR B 370 LEU B 373 5 4 HELIX 8 AA8 PRO B 462 SER B 473 1 12 SHEET 1 AA1 4 ALA A 456 CYS A 459 0 SHEET 2 AA1 4 GLU A 437 PHE A 445 -1 N SER A 444 O ILE A 457 SHEET 3 AA1 4 VAL A 248 THR A 251 -1 N TYR A 250 O PHE A 441 SHEET 4 AA1 4 GLY A 513 VAL A 515 -1 O GLY A 513 N THR A 251 SHEET 1 AA2 6 ALA A 456 CYS A 459 0 SHEET 2 AA2 6 GLU A 437 PHE A 445 -1 N SER A 444 O ILE A 457 SHEET 3 AA2 6 PHE A 504 ALA A 508 -1 O VAL A 507 N CYS A 438 SHEET 4 AA2 6 THR A 493 HIS A 500 -1 N HIS A 500 O PHE A 504 SHEET 5 AA2 6 VAL A 480 VAL A 486 -1 N TYR A 485 O LEU A 494 SHEET 6 AA2 6 TYR A 522 VAL A 529 -1 O SER A 527 N LEU A 482 SHEET 1 AA3 8 GLY B 450 TYR B 452 0 SHEET 2 AA3 8 ALA A 354 ALA A 363 -1 N ASN A 355 O GLY B 451 SHEET 3 AA3 8 ASN A 375 THR A 380 -1 O SER A 379 N VAL A 361 SHEET 4 AA3 8 THR A 301 VAL A 307 -1 N MET A 305 O ILE A 376 SHEET 5 AA3 8 PHE A 286 VAL A 294 -1 N THR A 291 O ASN A 304 SHEET 6 AA3 8 PRO A 391 LEU A 399 -1 O THR A 392 N GLY A 288 SHEET 7 AA3 8 GLN A 333 ARG A 341 -1 N SER A 339 O LYS A 393 SHEET 8 AA3 8 ALA A 354 ALA A 363 -1 O ILE A 362 N ILE A 334 SHEET 1 AA4 8 GLY A 450 TYR A 452 0 SHEET 2 AA4 8 ALA B 354 ALA B 363 -1 O ASN B 355 N GLY A 451 SHEET 3 AA4 8 ASN B 375 THR B 380 -1 O SER B 379 N VAL B 361 SHEET 4 AA4 8 THR B 301 VAL B 307 -1 N MET B 305 O ILE B 376 SHEET 5 AA4 8 PHE B 286 VAL B 294 -1 N THR B 291 O ASN B 304 SHEET 6 AA4 8 PRO B 391 LEU B 399 -1 O THR B 392 N GLY B 288 SHEET 7 AA4 8 GLN B 333 ARG B 341 -1 N TYR B 335 O VAL B 397 SHEET 8 AA4 8 ALA B 354 ALA B 363 -1 O ILE B 362 N ILE B 334 SHEET 1 AA5 4 ALA B 456 CYS B 459 0 SHEET 2 AA5 4 CYS B 438 PHE B 445 -1 N SER B 444 O ILE B 457 SHEET 3 AA5 4 VAL B 248 THR B 251 -1 N VAL B 248 O ARG B 443 SHEET 4 AA5 4 GLY B 513 PRO B 514 -1 O GLY B 513 N THR B 251 SHEET 1 AA6 6 ALA B 456 CYS B 459 0 SHEET 2 AA6 6 CYS B 438 PHE B 445 -1 N SER B 444 O ILE B 457 SHEET 3 AA6 6 PHE B 504 VAL B 507 -1 O VAL B 507 N CYS B 438 SHEET 4 AA6 6 THR B 493 HIS B 500 -1 N HIS B 500 O PHE B 504 SHEET 5 AA6 6 VAL B 480 VAL B 486 -1 N ALA B 481 O LEU B 499 SHEET 6 AA6 6 TYR B 522 VAL B 529 -1 O SER B 527 N LEU B 482 LINK OG1 THR A 275 NA NA A 600 1555 1555 2.72 LINK O THR A 327 NA NA A 600 1555 1555 2.64 LINK O PRO A 328 NA NA A 600 1555 1555 3.01 LINK OH TYR A 416 NA NA A 600 1555 1555 2.74 LINK OG1 THR B 275 NA NA B 600 1555 1555 2.70 LINK O THR B 327 NA NA B 600 1555 1555 2.75 LINK O PRO B 328 NA NA B 600 1555 1555 3.16 LINK OH TYR B 416 NA NA B 600 1555 1555 2.68 SITE 1 AC1 5 THR A 275 THR A 327 PRO A 328 ASP A 329 SITE 2 AC1 5 TYR A 416 SITE 1 AC2 9 HIS A 298 ARG A 299 GLY A 300 GLN A 333 SITE 2 AC2 9 VAL A 361 TYR A 365 SER A 379 THR A 380 SITE 3 AC2 9 TRP A 381 SITE 1 AC3 6 GLN B 262 THR B 275 THR B 327 PRO B 328 SITE 2 AC3 6 ASP B 329 TYR B 416 SITE 1 AC4 9 HIS B 298 ARG B 299 GLY B 300 GLN B 333 SITE 2 AC4 9 TYR B 365 SER B 379 THR B 380 TRP B 381 SITE 3 AC4 9 HOH B 744 CRYST1 107.850 79.670 87.690 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009272 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012552 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011404 0.00000