HEADER VIRAL PROTEIN 21-JUN-18 6GW4 TITLE GII.19 HUMAN NOROVIRUS PROTRUDING DOMAIN IN COMPLEX WITH TITLE 2 GLYCOCHENODEOXYCHOLATE (GCDCA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NORWALK-LIKE VIRUS; SOURCE 3 ORGANISM_TAXID: 95340; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS NOROVIRUS, GII.19, P DOMAIN, GCDCA, HBGA, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.KILIC,G.S.HANSMAN REVDAT 4 17-JAN-24 6GW4 1 REMARK REVDAT 3 16-JAN-19 6GW4 1 JRNL REVDAT 2 07-NOV-18 6GW4 1 JRNL REVDAT 1 17-OCT-18 6GW4 0 JRNL AUTH T.KILIC,A.KOROMYSLOVA,G.S.HANSMAN JRNL TITL STRUCTURAL BASIS FOR HUMAN NOROVIRUS CAPSID BINDING TO BILE JRNL TITL 2 ACIDS. JRNL REF J. VIROL. V. 93 2019 JRNL REFN ESSN 1098-5514 JRNL PMID 30355683 JRNL DOI 10.1128/JVI.01581-18 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 20419 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1022 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.8122 - 4.3896 1.00 3003 159 0.1582 0.1758 REMARK 3 2 4.3896 - 3.4846 1.00 2811 147 0.1603 0.2010 REMARK 3 3 3.4846 - 3.0442 1.00 2757 146 0.1881 0.2435 REMARK 3 4 3.0442 - 2.7660 1.00 2734 144 0.1979 0.2386 REMARK 3 5 2.7660 - 2.5677 1.00 2704 142 0.1939 0.2270 REMARK 3 6 2.5677 - 2.4164 1.00 2711 143 0.1922 0.2808 REMARK 3 7 2.4164 - 2.2953 0.99 2677 141 0.1957 0.2522 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.68 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2447 REMARK 3 ANGLE : 0.588 3348 REMARK 3 CHIRALITY : 0.048 367 REMARK 3 PLANARITY : 0.005 442 REMARK 3 DIHEDRAL : 10.803 1425 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 225 THROUGH 293 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.0944 -19.3636 -9.5980 REMARK 3 T TENSOR REMARK 3 T11: 0.3450 T22: 0.2425 REMARK 3 T33: 0.2920 T12: 0.0269 REMARK 3 T13: 0.0301 T23: -0.0148 REMARK 3 L TENSOR REMARK 3 L11: 0.7847 L22: 0.8993 REMARK 3 L33: 0.9579 L12: 0.3807 REMARK 3 L13: -0.3417 L23: -0.5536 REMARK 3 S TENSOR REMARK 3 S11: 0.0531 S12: -0.0248 S13: -0.0213 REMARK 3 S21: 0.1122 S22: -0.0790 S23: -0.0123 REMARK 3 S31: -0.1383 S32: -0.1451 S33: 0.0421 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 294 THROUGH 326 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.5430 -1.5214 -17.6603 REMARK 3 T TENSOR REMARK 3 T11: 0.4342 T22: 0.2403 REMARK 3 T33: 0.3884 T12: 0.0547 REMARK 3 T13: -0.0364 T23: 0.0343 REMARK 3 L TENSOR REMARK 3 L11: 1.0864 L22: 0.3873 REMARK 3 L33: 0.6463 L12: 0.3501 REMARK 3 L13: -0.7898 L23: -0.2120 REMARK 3 S TENSOR REMARK 3 S11: -0.1780 S12: 0.4263 S13: 0.4683 REMARK 3 S21: 0.1420 S22: 0.2332 S23: -0.0228 REMARK 3 S31: -0.3197 S32: -0.1032 S33: 0.0614 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 327 THROUGH 448 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.9248 -8.8921 -11.8775 REMARK 3 T TENSOR REMARK 3 T11: 0.3693 T22: 0.2215 REMARK 3 T33: 0.2970 T12: 0.0096 REMARK 3 T13: 0.0144 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 0.4594 L22: 1.1889 REMARK 3 L33: 1.1391 L12: 0.1607 REMARK 3 L13: 0.4244 L23: -0.6241 REMARK 3 S TENSOR REMARK 3 S11: 0.0632 S12: -0.0642 S13: 0.0930 REMARK 3 S21: 0.2962 S22: -0.1110 S23: -0.0013 REMARK 3 S31: -0.4222 S32: 0.0783 S33: 0.0144 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 449 THROUGH 531 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.8795 -31.0527 -2.0422 REMARK 3 T TENSOR REMARK 3 T11: 0.2710 T22: 0.2697 REMARK 3 T33: 0.2962 T12: 0.0025 REMARK 3 T13: 0.0393 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 1.4788 L22: 2.3621 REMARK 3 L33: 3.3269 L12: 1.0261 REMARK 3 L13: -0.3288 L23: -1.1652 REMARK 3 S TENSOR REMARK 3 S11: 0.0645 S12: -0.0578 S13: -0.1192 REMARK 3 S21: 0.1493 S22: -0.0437 S23: 0.0689 REMARK 3 S31: 0.0000 S32: -0.2887 S33: -0.0740 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GW4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1200010639. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.072270 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION NOV 11, 2017 REMARK 200 DATA SCALING SOFTWARE : XSCALE VERSION NOV 11, 2017 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44206 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.540 REMARK 200 RESOLUTION RANGE LOW (A) : 59.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 13.70 REMARK 200 R MERGE (I) : 0.05719 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.2 REMARK 200 DATA REDUNDANCY IN SHELL : 13.30 REMARK 200 R MERGE FOR SHELL (I) : 0.66740 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.570 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3ONU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE 0.1 M SODIUM REMARK 280 ACETATE PH 4.6 30%(W/V) PEG 4000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 149.27333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 74.63667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 111.95500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 37.31833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 186.59167 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 149.27333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 74.63667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 37.31833 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 111.95500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 186.59167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 736 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 256 CG OD1 ND2 REMARK 470 VAL A 257 CG1 CG2 REMARK 470 ARG A 287 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 295 CG1 CG2 REMARK 470 ASP A 296 CG OD1 OD2 REMARK 470 LEU A 313 CG CD1 CD2 REMARK 470 GLU A 318 CG CD OE1 OE2 REMARK 470 ASP A 319 CG OD1 OD2 REMARK 470 SER A 347 OG REMARK 470 LEU A 413 CG CD1 CD2 REMARK 470 LEU A 415 CG CD1 CD2 REMARK 470 ARG A 485 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 494 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 509 CG1 CG2 REMARK 470 ASN A 523 CG OD1 ND2 REMARK 470 GLN A 524 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 243 93.47 -66.48 REMARK 500 ASN A 256 43.01 -105.07 REMARK 500 GLN A 260 57.21 -146.84 REMARK 500 HIS A 300 -1.04 70.56 REMARK 500 PRO A 309 -2.21 -58.97 REMARK 500 ASN A 381 -36.13 -132.23 REMARK 500 ASP A 382 59.56 -93.38 REMARK 500 THR A 414 -135.54 50.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CHO A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 604 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6GVZ RELATED DB: PDB REMARK 900 GII.1 WITH GCDCA REMARK 900 RELATED ID: 6GW0 RELATED DB: PDB REMARK 900 GII.1 WITH TCDCA REMARK 900 RELATED ID: 6GW1 RELATED DB: PDB REMARK 900 GII.10 WITH GCDCA REMARK 900 RELATED ID: 6GW2 RELATED DB: PDB REMARK 900 GII.10 WITH TCDCA DBREF 6GW4 A 225 531 UNP A0ZNP3 A0ZNP3_9CALI 225 531 SEQRES 1 A 307 LYS PRO PHE THR LEU PRO VAL LEU THR ILE GLY GLU MET SEQRES 2 A 307 THR ASN SER ARG PHE PRO ALA PRO ILE ASP MET LEU TYR SEQRES 3 A 307 THR SER PRO ASN GLY ASN VAL VAL VAL GLN PRO GLN ASN SEQRES 4 A 307 GLY ARG CYS THR LEU ASP GLY GLU LEU GLN GLY SER THR SEQRES 5 A 307 GLN LEU VAL PRO ALA ASN VAL CYS ALA PHE ARG GLY LYS SEQRES 6 A 307 ILE THR ALA ARG ILE VAL ASP GLN ALA ALA HIS GLN TRP SEQRES 7 A 307 HIS MET GLN ILE ASP ASN PRO ASN GLY THR LEU PHE ASP SEQRES 8 A 307 PRO THR GLU ASP VAL PRO ALA PRO LEU GLY THR PRO ASP SEQRES 9 A 307 PHE LYS ALA LYS ILE PHE GLY VAL ILE SER GLN ARG ASN SEQRES 10 A 307 ASP TYR ASN ASP GLY SER GLN GLY PRO ALA ASN ARG ALA SEQRES 11 A 307 HIS ASP ALA VAL VAL PRO THR THR SER ALA LYS PHE THR SEQRES 12 A 307 PRO LYS LEU GLY SER ILE LEU VAL GLY THR TRP GLU ASN SEQRES 13 A 307 ASN ASP ILE GLU THR GLN PRO SER LYS PHE THR PRO VAL SEQRES 14 A 307 GLY LEU LEU GLU MET ASN ASP PHE ASN GLN TRP SER LEU SEQRES 15 A 307 PRO ASN TYR SER GLY ALA LEU THR LEU ASN MET GLY LEU SEQRES 16 A 307 ALA PRO ALA VAL PHE PRO THR PHE PRO GLY GLU GLN ILE SEQRES 17 A 307 LEU PHE PHE ARG SER PHE ILE PRO LEU LYS GLY GLY HIS SEQRES 18 A 307 GLY ASN PRO ALA ILE ASP CYS LEU LEU PRO GLN GLU TRP SEQRES 19 A 307 ILE GLN HIS PHE TYR GLN GLU SER ALA PRO SER GLN THR SEQRES 20 A 307 SER VAL ALA LEU ILE ARG TYR VAL ASN PRO ASP THR GLY SEQRES 21 A 307 ARG VAL LEU PHE GLU GLY LYS LEU HIS ARG GLN GLY PHE SEQRES 22 A 307 ILE THR ILE ALA LYS SER GLY ASP GLY PRO ILE VAL VAL SEQRES 23 A 307 PRO PRO ASN GLY TYR PHE ARG PHE ASP SER TRP VAL ASN SEQRES 24 A 307 GLN PHE TYR SER LEU ALA PRO MET HET CHO A 600 32 HET EDO A 601 4 HET EDO A 602 4 HET EDO A 603 4 HET EDO A 604 4 HETNAM CHO GLYCOCHENODEOXYCHOLIC ACID HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 CHO C26 H43 N O5 FORMUL 3 EDO 4(C2 H6 O2) FORMUL 7 HOH *98(H2 O) HELIX 1 AA1 THR A 233 MET A 237 5 5 HELIX 2 AA2 VAL A 279 VAL A 283 5 5 HELIX 3 AA3 ASP A 345 GLY A 349 5 5 HELIX 4 AA4 THR A 367 LEU A 370 5 4 HELIX 5 AA5 PRO A 455 SER A 466 1 12 SHEET 1 AA1 4 ALA A 449 CYS A 452 0 SHEET 2 AA1 4 GLU A 430 PHE A 438 -1 N SER A 437 O ILE A 450 SHEET 3 AA1 4 MET A 248 SER A 252 -1 N TYR A 250 O PHE A 434 SHEET 4 AA1 4 GLY A 506 ILE A 508 -1 O GLY A 506 N THR A 251 SHEET 1 AA2 6 ALA A 449 CYS A 452 0 SHEET 2 AA2 6 GLU A 430 PHE A 438 -1 N SER A 437 O ILE A 450 SHEET 3 AA2 6 PHE A 497 ALA A 501 -1 O ILE A 498 N LEU A 433 SHEET 4 AA2 6 VAL A 486 HIS A 493 -1 N LYS A 491 O THR A 499 SHEET 5 AA2 6 VAL A 473 VAL A 479 -1 N ALA A 474 O LEU A 492 SHEET 6 AA2 6 TYR A 515 VAL A 522 -1 O SER A 520 N LEU A 475 SHEET 1 AA3 7 PHE A 286 ARG A 293 0 SHEET 2 AA3 7 GLN A 301 ILE A 306 -1 O GLN A 305 N LYS A 289 SHEET 3 AA3 7 SER A 372 THR A 377 -1 O VAL A 375 N TRP A 302 SHEET 4 AA3 7 ASN A 352 PRO A 360 -1 N VAL A 358 O GLY A 376 SHEET 5 AA3 7 LYS A 332 ARG A 340 -1 N GLN A 339 O ARG A 353 SHEET 6 AA3 7 PRO A 387 LEU A 395 -1 O THR A 391 N VAL A 336 SHEET 7 AA3 7 PHE A 286 ARG A 293 -1 N PHE A 286 O PHE A 390 SITE 1 AC1 7 GLN A 301 PRO A 360 SER A 363 ALA A 364 SITE 2 AC1 7 THR A 377 TRP A 378 LEU A 396 SITE 1 AC2 6 GLU A 457 GLN A 460 HIS A 461 HOH A 732 SITE 2 AC2 6 HOH A 736 HOH A 770 SITE 1 AC3 1 TYR A 515 SITE 1 AC4 1 ASP A 519 SITE 1 AC5 1 TYR A 463 CRYST1 81.240 81.240 223.910 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012309 0.007107 0.000000 0.00000 SCALE2 0.000000 0.014213 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004466 0.00000