HEADER HYDROLASE 25-JUN-18 6GWN TITLE CRYSTAL STRUCTURE OF STABILIZED ACTIVE PLASMINOGEN ACTIVATOR TITLE 2 INHIBITOR-1 (PAI-1-W175F) IN COMPLEX WITH TWO INHIBITORY NANOBODIES TITLE 3 (VHH-2G-42, VHH-2W-64) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLASMINOGEN ACTIVATOR INHIBITOR 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PAI-1,ENDOTHELIAL PLASMINOGEN ACTIVATOR INHIBITOR,SERPIN E1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: VHH-2G-42; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: VHH-2W-64; COMPND 13 CHAIN: C; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SERPINE1, PAI1, PLANH1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA2 PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETHSUK2; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 13 ORGANISM_COMMON: ALPACA; SOURCE 14 ORGANISM_TAXID: 30538; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_VARIANT: ROSETTA2 PLYSS; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PETHSUK2; SOURCE 20 MOL_ID: 3; SOURCE 21 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 22 ORGANISM_COMMON: ALPACA; SOURCE 23 ORGANISM_TAXID: 30538; SOURCE 24 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 25 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 26 EXPRESSION_SYSTEM_VARIANT: ROSETTA2 PLYSS; SOURCE 27 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 28 EXPRESSION_SYSTEM_PLASMID: PETHSUK2 KEYWDS PLASMINOGEN ACTIVATOR INHIBITOR-1, PAI-1, PAI-1-W175F, SERPIN, KEYWDS 2 PROTEASE INHIBITOR, SERINE PROTEASE INHIBITOR, NANOBODY, ANTIBODY KEYWDS 3 FRAGMENT, PROTEIN COMPLEX, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.SILLEN,S.D.WEEKS,S.V.STRELKOV,P.J.DECLERCK REVDAT 3 17-JAN-24 6GWN 1 REMARK REVDAT 2 11-MAR-20 6GWN 1 JRNL REVDAT 1 01-JAN-20 6GWN 0 JRNL AUTH M.SILLEN,S.D.WEEKS,X.ZHOU,A.A.KOMISSAROV,G.FLOROVA,S.IDELL, JRNL AUTH 2 S.V.STRELKOV,P.J.DECLERCK JRNL TITL MOLECULAR MECHANISM OF TWO NANOBODIES THAT INHIBIT PAI-1 JRNL TITL 2 ACTIVITY REVEALS A MODULATION AT DISTINCT STAGES OF THE JRNL TITL 3 PAI-1/PLASMINOGEN ACTIVATOR INTERACTION. JRNL REF J.THROMB.HAEMOST. V. 18 681 2020 JRNL REFN ESSN 1538-7836 JRNL PMID 31858714 JRNL DOI 10.1111/JTH.14716 REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 94.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.320 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 38685 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1956 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 95.0737 - 4.8924 0.98 2699 156 0.1586 0.1805 REMARK 3 2 4.8924 - 3.8832 0.99 2682 134 0.1512 0.1784 REMARK 3 3 3.8832 - 3.3923 0.98 2639 134 0.1955 0.2387 REMARK 3 4 3.3923 - 3.0821 0.99 2661 140 0.2233 0.2631 REMARK 3 5 3.0821 - 2.8612 0.99 2628 140 0.2378 0.2760 REMARK 3 6 2.8612 - 2.6925 0.99 2671 123 0.2381 0.3342 REMARK 3 7 2.6925 - 2.5577 0.98 2629 115 0.2480 0.3286 REMARK 3 8 2.5577 - 2.4463 0.98 2640 138 0.2609 0.3658 REMARK 3 9 2.4463 - 2.3521 0.98 2586 142 0.2715 0.3595 REMARK 3 10 2.3521 - 2.2710 0.98 2600 159 0.2812 0.3267 REMARK 3 11 2.2710 - 2.1999 0.98 2608 155 0.2959 0.3195 REMARK 3 12 2.1999 - 2.1371 0.98 2599 138 0.3083 0.3402 REMARK 3 13 2.1371 - 2.0808 0.98 2578 146 0.3282 0.3688 REMARK 3 14 2.0808 - 2.0300 0.94 2509 136 0.3634 0.4108 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.93 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4671 REMARK 3 ANGLE : 1.060 6346 REMARK 3 CHIRALITY : 0.075 714 REMARK 3 PLANARITY : 0.006 819 REMARK 3 DIHEDRAL : 13.399 1659 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 379 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.9566 -8.4636 -21.0970 REMARK 3 T TENSOR REMARK 3 T11: 0.2818 T22: 0.4306 REMARK 3 T33: 0.3626 T12: -0.0260 REMARK 3 T13: 0.0186 T23: 0.0790 REMARK 3 L TENSOR REMARK 3 L11: 1.4521 L22: 1.5151 REMARK 3 L33: 2.2610 L12: -0.9649 REMARK 3 L13: 1.2530 L23: -1.4421 REMARK 3 S TENSOR REMARK 3 S11: -0.0478 S12: 0.2413 S13: 0.1827 REMARK 3 S21: 0.0327 S22: 0.0309 S23: -0.0341 REMARK 3 S31: -0.1738 S32: 0.0038 S33: 0.0204 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.0192 -4.7951 -55.5578 REMARK 3 T TENSOR REMARK 3 T11: 0.4063 T22: 0.8080 REMARK 3 T33: 0.3846 T12: 0.0526 REMARK 3 T13: 0.0021 T23: 0.1982 REMARK 3 L TENSOR REMARK 3 L11: 4.5730 L22: 2.2863 REMARK 3 L33: 4.0374 L12: -0.1468 REMARK 3 L13: -1.6777 L23: 1.1196 REMARK 3 S TENSOR REMARK 3 S11: 0.0458 S12: 0.2883 S13: 0.1667 REMARK 3 S21: -0.2999 S22: 0.0879 S23: -0.1636 REMARK 3 S31: 0.0630 S32: 0.3790 S33: -0.0816 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 2 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.1446 -41.0296 -10.1184 REMARK 3 T TENSOR REMARK 3 T11: 0.2684 T22: 0.4395 REMARK 3 T33: 0.2632 T12: -0.0028 REMARK 3 T13: 0.0241 T23: -0.0132 REMARK 3 L TENSOR REMARK 3 L11: 2.6861 L22: 5.1878 REMARK 3 L33: 3.7918 L12: 0.0784 REMARK 3 L13: -0.5291 L23: -0.3546 REMARK 3 S TENSOR REMARK 3 S11: -0.0887 S12: 0.3904 S13: -0.1290 REMARK 3 S21: -0.1681 S22: -0.0051 S23: -0.3107 REMARK 3 S31: 0.3744 S32: 0.0225 S33: 0.0733 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GWN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1200010603. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976251 REMARK 200 MONOCHROMATOR : SI (111) MONOCHROMATOR REMARK 200 OPTICS : CRL COMBINATIONS FOR VERTICAL REMARK 200 FOCUSSING AND AN ELIPTICAL REMARK 200 MIRROR FOR HORIZONTAL FOCUSSING REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JUN 1, 2017 BUILT=20170923 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.32 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42665 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.960 REMARK 200 RESOLUTION RANGE LOW (A) : 94.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.96 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.78300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.7.17 REMARK 200 STARTING MODEL: 3Q02, 5JA8, 5JA9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS, 10 % W/V PEG 3350, PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.71200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 84 REMARK 465 PRO A 85 REMARK 465 TRP A 86 REMARK 465 ASN A 87 REMARK 465 ALA A 335 REMARK 465 SER A 336 REMARK 465 SER A 337 REMARK 465 SER A 338 REMARK 465 THR A 339 REMARK 465 ALA A 340 REMARK 465 VAL A 341 REMARK 465 ILE A 342 REMARK 465 VAL A 343 REMARK 465 SER A 344 REMARK 465 ALA A 345 REMARK 465 ARG A 346 REMARK 465 MET A 347 REMARK 465 ALA A 348 REMARK 465 SER B 116 REMARK 465 GLN C 1 REMARK 465 SER C 121 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 1 CG1 CG2 REMARK 470 HIS A 2 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 28 CD CE NZ REMARK 470 ARG A 30 CD NE CZ NH1 NH2 REMARK 470 GLN A 56 CG CD OE1 NE2 REMARK 470 LYS A 69 CG CD CE NZ REMARK 470 HIS A 77 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 80 CG CD CE NZ REMARK 470 GLU A 81 CG CD OE1 OE2 REMARK 470 LYS A 88 CG CD CE NZ REMARK 470 ASP A 89 CG OD1 OD2 REMARK 470 GLU A 90 CG CD OE1 OE2 REMARK 470 LYS A 104 CD CE NZ REMARK 470 ARG A 131 CD NE CZ NH1 NH2 REMARK 470 LYS A 145 CD CE NZ REMARK 470 ARG A 186 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 207 CE NZ REMARK 470 VAL A 334 CG1 CG2 REMARK 470 GLU A 350 CD OE1 OE2 REMARK 470 GLN B 1 CG CD OE1 NE2 REMARK 470 ARG B 19 NE CZ NH1 NH2 REMARK 470 GLU B 44 CG CD OE1 OE2 REMARK 470 LYS B 65 CD CE NZ REMARK 470 LYS B 76 CD CE NZ REMARK 470 GLU B 82 CG CD OE1 OE2 REMARK 470 GLU B 89 CG CD OE1 OE2 REMARK 470 GLN C 13 CG CD OE1 NE2 REMARK 470 LYS C 43 CE NZ REMARK 470 GLU C 89 CG CD OE1 OE2 REMARK 470 GLN C 113 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 89 -6.27 86.89 REMARK 500 ASN A 172 49.74 -151.44 REMARK 500 THR A 232 -38.96 -139.97 REMARK 500 THR B 77 57.55 26.95 REMARK 500 ASP C 55 11.44 -142.00 REMARK 500 REMARK 500 REMARK: NULL DBREF 6GWN A 1 379 UNP P05121 PAI1_HUMAN 24 402 DBREF 6GWN B 1 116 PDB 6GWN 6GWN 1 116 DBREF 6GWN C 1 121 PDB 6GWN 6GWN 1 121 SEQADV 6GWN PHE A 175 UNP P05121 TRP 198 ENGINEERED MUTATION SEQRES 1 A 379 VAL HIS HIS PRO PRO SER TYR VAL ALA HIS LEU ALA SER SEQRES 2 A 379 ASP PHE GLY VAL ARG VAL PHE GLN GLN VAL ALA GLN ALA SEQRES 3 A 379 SER LYS ASP ARG ASN VAL VAL PHE SER PRO TYR GLY VAL SEQRES 4 A 379 ALA SER VAL LEU ALA MET LEU GLN LEU THR THR GLY GLY SEQRES 5 A 379 GLU THR GLN GLN GLN ILE GLN ALA ALA MET GLY PHE LYS SEQRES 6 A 379 ILE ASP ASP LYS GLY MET ALA PRO ALA LEU ARG HIS LEU SEQRES 7 A 379 TYR LYS GLU LEU MET GLY PRO TRP ASN LYS ASP GLU ILE SEQRES 8 A 379 SER THR THR ASP ALA ILE PHE VAL GLN ARG ASP LEU LYS SEQRES 9 A 379 LEU VAL GLN GLY PHE MET PRO HIS PHE PHE ARG LEU PHE SEQRES 10 A 379 ARG SER THR VAL LYS GLN VAL ASP PHE SER GLU VAL GLU SEQRES 11 A 379 ARG ALA ARG PHE ILE ILE ASN ASP TRP VAL LYS THR HIS SEQRES 12 A 379 THR LYS GLY MET ILE SER ASN LEU LEU GLY LYS GLY ALA SEQRES 13 A 379 VAL ASP GLN LEU THR ARG LEU VAL LEU VAL ASN ALA LEU SEQRES 14 A 379 TYR PHE ASN GLY GLN PHE LYS THR PRO PHE PRO ASP SER SEQRES 15 A 379 SER THR HIS ARG ARG LEU PHE HIS LYS SER ASP GLY SER SEQRES 16 A 379 THR VAL SER VAL PRO MET MET ALA GLN THR ASN LYS PHE SEQRES 17 A 379 ASN TYR THR GLU PHE THR THR PRO ASP GLY HIS TYR TYR SEQRES 18 A 379 ASP ILE LEU GLU LEU PRO TYR HIS GLY ASP THR LEU SER SEQRES 19 A 379 MET PHE ILE ALA ALA PRO TYR GLU LYS GLU VAL PRO LEU SEQRES 20 A 379 SER ALA LEU THR ASN ILE LEU SER ALA GLN LEU ILE SER SEQRES 21 A 379 HIS TRP LYS GLY ASN MET THR ARG LEU PRO ARG LEU LEU SEQRES 22 A 379 VAL LEU PRO LYS PHE SER LEU GLU THR GLU VAL ASP LEU SEQRES 23 A 379 ARG LYS PRO LEU GLU ASN LEU GLY MET THR ASP MET PHE SEQRES 24 A 379 ARG GLN PHE GLN ALA ASP PHE THR SER LEU SER ASP GLN SEQRES 25 A 379 GLU PRO LEU HIS VAL ALA GLN ALA LEU GLN LYS VAL LYS SEQRES 26 A 379 ILE GLU VAL ASN GLU SER GLY THR VAL ALA SER SER SER SEQRES 27 A 379 THR ALA VAL ILE VAL SER ALA ARG MET ALA PRO GLU GLU SEQRES 28 A 379 ILE ILE MET ASP ARG PRO PHE LEU PHE VAL VAL ARG HIS SEQRES 29 A 379 ASN PRO THR GLY THR VAL LEU PHE MET GLY GLN VAL MET SEQRES 30 A 379 GLU PRO SEQRES 1 B 116 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 B 116 PRO GLY GLY ARG LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 B 116 PHE THR PHE ARG THR TYR ALA MET GLN TRP TYR ARG GLN SEQRES 4 B 116 SER PRO GLY THR GLU ARG GLU LEU VAL ALA ALA ILE SER SEQRES 5 B 116 ASN ILE GLY GLY VAL THR ASP TYR GLY ASP SER VAL LYS SEQRES 6 B 116 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS THR THR SEQRES 7 B 116 VAL TYR LEU GLU MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 B 116 ALA THR TYR TYR CYS SER ALA VAL ARG LEU PRO GLN ARG SEQRES 9 B 116 TYR TRP GLY ARG GLY THR GLN VAL THR VAL SER SER SEQRES 1 C 121 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 C 121 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 C 121 PHE THR PHE ASP ASP TYR SER ILE ALA TRP PHE ARG GLN SEQRES 4 C 121 ALA PRO GLY LYS GLU ARG GLU GLY VAL SER CYS ILE SER SEQRES 5 C 121 SER SER ASP GLY SER ALA TYR TYR ALA ASP SER VAL LYS SEQRES 6 C 121 GLY ARG PHE THR ILE SER SER ASP ASN ALA LYS ASN THR SEQRES 7 C 121 VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 C 121 ALA VAL TYR TYR CYS ALA ALA VAL TRP ALA ARG VAL CYS SEQRES 9 C 121 ARG ASN PRO TYR ASP TYR TRP GLY GLN GLY THR GLN VAL SEQRES 10 C 121 THR VAL SER SER FORMUL 4 HOH *109(H2 O) HELIX 1 AA1 PRO A 5 SER A 27 1 23 HELIX 2 AA2 SER A 35 THR A 50 1 16 HELIX 3 AA3 GLY A 51 GLY A 63 1 13 HELIX 4 AA4 GLY A 70 MET A 83 1 14 HELIX 5 AA5 GLY A 108 ARG A 118 1 11 HELIX 6 AA6 GLU A 128 HIS A 143 1 16 HELIX 7 AA7 PRO A 180 THR A 184 5 5 HELIX 8 AA8 LEU A 247 ASN A 252 1 6 HELIX 9 AA9 SER A 255 ASN A 265 1 11 HELIX 10 AB1 LEU A 286 LEU A 293 1 8 HELIX 11 AB2 THR A 296 ARG A 300 5 5 HELIX 12 AB3 THR B 28 TYR B 32 5 5 HELIX 13 AB4 LYS B 87 THR B 91 5 5 HELIX 14 AB5 THR C 28 TYR C 32 5 5 HELIX 15 AB6 LYS C 87 THR C 91 5 5 SHEET 1 AA1 7 VAL A 32 PHE A 34 0 SHEET 2 AA1 7 THR A 369 VAL A 376 -1 O MET A 373 N PHE A 34 SHEET 3 AA1 7 PHE A 358 HIS A 364 -1 N VAL A 362 O PHE A 372 SHEET 4 AA1 7 LEU A 233 PRO A 240 -1 N PHE A 236 O VAL A 361 SHEET 5 AA1 7 TYR A 220 PRO A 227 -1 N LEU A 226 O MET A 235 SHEET 6 AA1 7 THR A 196 THR A 214 -1 N ASN A 209 O GLU A 225 SHEET 7 AA1 7 HIS A 185 HIS A 190 -1 N PHE A 189 O VAL A 197 SHEET 1 AA2 8 VAL A 32 PHE A 34 0 SHEET 2 AA2 8 THR A 369 VAL A 376 -1 O MET A 373 N PHE A 34 SHEET 3 AA2 8 PHE A 358 HIS A 364 -1 N VAL A 362 O PHE A 372 SHEET 4 AA2 8 LEU A 233 PRO A 240 -1 N PHE A 236 O VAL A 361 SHEET 5 AA2 8 TYR A 220 PRO A 227 -1 N LEU A 226 O MET A 235 SHEET 6 AA2 8 THR A 196 THR A 214 -1 N ASN A 209 O GLU A 225 SHEET 7 AA2 8 THR A 267 PRO A 276 -1 O LEU A 273 N GLN A 204 SHEET 8 AA2 8 GLU A 351 ILE A 353 1 O ILE A 352 N LEU A 272 SHEET 1 AA3 5 LYS A 122 VAL A 124 0 SHEET 2 AA3 5 ILE A 91 GLN A 100 1 N ILE A 97 O LYS A 122 SHEET 3 AA3 5 LEU A 163 PHE A 171 -1 O VAL A 164 N PHE A 98 SHEET 4 AA3 5 GLN A 319 VAL A 328 1 O GLN A 319 N LEU A 165 SHEET 5 AA3 5 PHE A 278 ASP A 285 -1 N VAL A 284 O GLN A 322 SHEET 1 AA4 4 GLN B 3 SER B 7 0 SHEET 2 AA4 4 LEU B 18 SER B 25 -1 O SER B 21 N SER B 7 SHEET 3 AA4 4 THR B 78 MET B 83 -1 O MET B 83 N LEU B 18 SHEET 4 AA4 4 PHE B 68 ASP B 73 -1 N ASP B 73 O THR B 78 SHEET 1 AA5 6 GLY B 10 VAL B 12 0 SHEET 2 AA5 6 THR B 110 VAL B 114 1 O THR B 113 N GLY B 10 SHEET 3 AA5 6 ALA B 92 ARG B 100 -1 N TYR B 94 O THR B 110 SHEET 4 AA5 6 ALA B 33 GLN B 39 -1 N ALA B 33 O VAL B 99 SHEET 5 AA5 6 GLU B 46 ILE B 51 -1 O VAL B 48 N TRP B 36 SHEET 6 AA5 6 THR B 58 TYR B 60 -1 O ASP B 59 N ALA B 50 SHEET 1 AA6 4 GLY B 10 VAL B 12 0 SHEET 2 AA6 4 THR B 110 VAL B 114 1 O THR B 113 N GLY B 10 SHEET 3 AA6 4 ALA B 92 ARG B 100 -1 N TYR B 94 O THR B 110 SHEET 4 AA6 4 GLN B 103 TRP B 106 -1 O TYR B 105 N ALA B 98 SHEET 1 AA7 4 GLN C 3 SER C 7 0 SHEET 2 AA7 4 LEU C 18 SER C 25 -1 O SER C 21 N SER C 7 SHEET 3 AA7 4 THR C 78 MET C 83 -1 O MET C 83 N LEU C 18 SHEET 4 AA7 4 PHE C 68 ASP C 73 -1 N THR C 69 O GLN C 82 SHEET 1 AA8 6 GLY C 10 GLN C 13 0 SHEET 2 AA8 6 THR C 115 SER C 120 1 O THR C 118 N GLY C 10 SHEET 3 AA8 6 ALA C 92 VAL C 99 -1 N ALA C 92 O VAL C 117 SHEET 4 AA8 6 SER C 33 GLN C 39 -1 N PHE C 37 O TYR C 95 SHEET 5 AA8 6 GLU C 46 ILE C 51 -1 O ILE C 51 N ILE C 34 SHEET 6 AA8 6 ALA C 58 TYR C 60 -1 O TYR C 59 N CYS C 50 SHEET 1 AA9 4 GLY C 10 GLN C 13 0 SHEET 2 AA9 4 THR C 115 SER C 120 1 O THR C 118 N GLY C 10 SHEET 3 AA9 4 ALA C 92 VAL C 99 -1 N ALA C 92 O VAL C 117 SHEET 4 AA9 4 TYR C 110 TRP C 111 -1 O TYR C 110 N ALA C 98 SSBOND 1 CYS C 50 CYS C 104 1555 1555 2.07 CISPEP 1 LEU B 101 PRO B 102 0 7.22 CISPEP 2 ASN C 106 PRO C 107 0 -3.02 CRYST1 45.483 71.424 96.598 90.00 100.53 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021986 0.000000 0.004089 0.00000 SCALE2 0.000000 0.014001 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010530 0.00000