HEADER CELL CYCLE 28-JUN-18 6GY2 TITLE CRYSTAL STRUCTURE OF HUMAN PLK1-PBD IN COMPLEX WITH WSSSLATPPTLSSPTVLI TITLE 2 PHOSPHOPEPTIDE FROM BRCA2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE PLK1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: POLO-LIKE KINASE 1,PLK-1,SERINE/THREONINE-PROTEIN KINASE 13, COMPND 5 STPK13; COMPND 6 EC: 2.7.11.21; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: THE SIX FIRST RESIDUES AMDPEF ARE PART OF LINKER; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: PHOSPHOPEPTIDE OF BRCA2; COMPND 11 CHAIN: C, D; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLK1, PLK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606 KEYWDS PHOSPHORYLATION, CHROMOSOMES ALIGNEMENT, DNA REPAIR, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR S.MIRON,V.ROPARS,S.ZINN-JUSTIN REVDAT 4 17-JAN-24 6GY2 1 REMARK REVDAT 3 30-MAR-22 6GY2 1 REMARK REVDAT 2 22-APR-20 6GY2 1 JRNL REVDAT 1 10-JUL-19 6GY2 0 JRNL AUTH A.EHLEN,C.MARTIN,S.MIRON,M.JULIEN,F.X.THEILLET,V.ROPARS, JRNL AUTH 2 G.SESSA,R.BEAUREPERE,V.BOUCHERIT,P.DUCHAMBON,A.EL MARJOU, JRNL AUTH 3 S.ZINN-JUSTIN,A.CARREIRA JRNL TITL PROPER CHROMOSOME ALIGNMENT DEPENDS ON BRCA2 PHOSPHORYLATION JRNL TITL 2 BY PLK1. JRNL REF NAT COMMUN V. 11 1819 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 32286328 JRNL DOI 10.1038/S41467-020-15689-9 REMARK 2 REMARK 2 RESOLUTION. 3.11 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.11 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 3 NUMBER OF REFLECTIONS : 9911 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.770 REMARK 3 FREE R VALUE TEST SET COUNT : 473 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 23 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 3.11 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.15 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.24 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 431 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2430 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 409 REMARK 3 BIN R VALUE (WORKING SET) : 0.2435 REMARK 3 BIN FREE R VALUE : 0.2345 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 22 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3814 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 22 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 76.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -27.21010 REMARK 3 B22 (A**2) : 14.30710 REMARK 3 B33 (A**2) : 12.90290 REMARK 3 B12 (A**2) : -10.01310 REMARK 3 B13 (A**2) : -8.87330 REMARK 3 B23 (A**2) : -2.68570 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.360 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.405 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.917 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.897 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3897 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5277 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1372 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 647 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3897 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 503 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4259 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 0.97 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.81 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.58 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -0.0228 -14.0315 2.3126 REMARK 3 T TENSOR REMARK 3 T11: -0.0904 T22: -0.0659 REMARK 3 T33: -0.0953 T12: -0.1401 REMARK 3 T13: -0.0105 T23: 0.0189 REMARK 3 L TENSOR REMARK 3 L11: 2.5103 L22: 4.0125 REMARK 3 L33: 1.9666 L12: -1.7691 REMARK 3 L13: -1.2467 L23: 0.5370 REMARK 3 S TENSOR REMARK 3 S11: -0.0463 S12: -0.1346 S13: 0.0360 REMARK 3 S21: 0.0936 S22: 0.0078 S23: -0.0750 REMARK 3 S31: -0.1188 S32: 0.0233 S33: 0.0385 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -19.4783 -24.4124 28.8895 REMARK 3 T TENSOR REMARK 3 T11: -0.0652 T22: -0.0410 REMARK 3 T33: -0.1173 T12: -0.1274 REMARK 3 T13: 0.0674 T23: 0.0483 REMARK 3 L TENSOR REMARK 3 L11: 2.4771 L22: 3.7121 REMARK 3 L33: 1.7841 L12: -1.4603 REMARK 3 L13: 0.6002 L23: -0.3037 REMARK 3 S TENSOR REMARK 3 S11: -0.0607 S12: -0.1870 S13: 0.0336 REMARK 3 S21: 0.1193 S22: -0.0136 S23: -0.0897 REMARK 3 S31: 0.0320 S32: -0.0519 S33: 0.0744 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): -28.5106 -24.8814 13.1956 REMARK 3 T TENSOR REMARK 3 T11: 0.0004 T22: 0.0600 REMARK 3 T33: -0.0316 T12: -0.0369 REMARK 3 T13: 0.0175 T23: -0.0538 REMARK 3 L TENSOR REMARK 3 L11: -0.0027 L22: 0.2321 REMARK 3 L33: 0.8595 L12: 0.0191 REMARK 3 L13: 0.0818 L23: 0.7388 REMARK 3 S TENSOR REMARK 3 S11: -0.0013 S12: -0.0021 S13: 0.0169 REMARK 3 S21: -0.0030 S22: 0.0019 S23: 0.0148 REMARK 3 S31: 0.0033 S32: -0.0113 S33: -0.0006 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): 2.4456 -16.7815 -15.2253 REMARK 3 T TENSOR REMARK 3 T11: 0.0132 T22: 0.0403 REMARK 3 T33: -0.0410 T12: -0.0165 REMARK 3 T13: 0.0441 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: -0.0340 L22: 0.2047 REMARK 3 L33: 1.1825 L12: 0.0689 REMARK 3 L13: -0.1290 L23: -0.0753 REMARK 3 S TENSOR REMARK 3 S11: -0.0004 S12: 0.0044 S13: -0.0295 REMARK 3 S21: 0.0029 S22: 0.0072 S23: 0.0094 REMARK 3 S31: -0.0126 S32: 0.0105 S33: -0.0068 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6GY2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1200010677. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9840 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9934 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.106 REMARK 200 RESOLUTION RANGE LOW (A) : 22.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 200 DATA REDUNDANCY : 1.940 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.11 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 1.98 REMARK 200 R MERGE FOR SHELL (I) : 0.34600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4O9W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, BISTRIS, DTT, PH 6.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 359 REMARK 465 MET A 360 REMARK 465 ASP A 361 REMARK 465 PRO A 362 REMARK 465 GLU A 363 REMARK 465 PHE A 364 REMARK 465 GLU A 365 REMARK 465 THR A 366 REMARK 465 GLY A 367 REMARK 465 GLU A 368 REMARK 465 VAL A 369 REMARK 465 ARG A 594 REMARK 465 SER A 595 REMARK 465 ALA A 596 REMARK 465 SER A 597 REMARK 465 ASN A 598 REMARK 465 ARG A 599 REMARK 465 LEU A 600 REMARK 465 LYS A 601 REMARK 465 ALA A 602 REMARK 465 SER A 603 REMARK 465 ALA B 359 REMARK 465 MET B 360 REMARK 465 ASP B 361 REMARK 465 PRO B 362 REMARK 465 GLU B 363 REMARK 465 PHE B 364 REMARK 465 GLU B 365 REMARK 465 THR B 366 REMARK 465 GLY B 367 REMARK 465 GLU B 368 REMARK 465 VAL B 369 REMARK 465 VAL B 370 REMARK 465 SER B 595 REMARK 465 ALA B 596 REMARK 465 SER B 597 REMARK 465 ASN B 598 REMARK 465 ARG B 599 REMARK 465 LEU B 600 REMARK 465 LYS B 601 REMARK 465 ALA B 602 REMARK 465 SER B 603 REMARK 465 TRP C 194 REMARK 465 SER C 195 REMARK 465 SER C 196 REMARK 465 SER C 197 REMARK 465 LEU C 198 REMARK 465 TRP D 194 REMARK 465 SER D 195 REMARK 465 SER D 196 REMARK 465 SER D 197 REMARK 465 LEU D 198 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN A 536 CD REMARK 480 MET B 473 SD REMARK 480 GLN B 536 CD REMARK 480 GLU B 555 CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 372 10.38 -65.47 REMARK 500 ASP A 449 -45.03 -131.97 REMARK 500 CYS B 372 10.52 -65.33 REMARK 500 ASP B 449 -44.89 -132.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Ligand residues TPO C 207 REMARK 800 through VAL C 208 bound to SER C 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Ligand residues TPO D 207 REMARK 800 through VAL D 208 bound to SER D 206 DBREF 6GY2 A 365 603 UNP P53350 PLK1_HUMAN 365 603 DBREF 6GY2 B 365 603 UNP P53350 PLK1_HUMAN 365 603 DBREF 6GY2 C 194 210 PDB 6GY2 6GY2 194 210 DBREF 6GY2 D 194 210 PDB 6GY2 6GY2 194 210 SEQADV 6GY2 ALA A 359 UNP P53350 EXPRESSION TAG SEQADV 6GY2 MET A 360 UNP P53350 EXPRESSION TAG SEQADV 6GY2 ASP A 361 UNP P53350 EXPRESSION TAG SEQADV 6GY2 PRO A 362 UNP P53350 EXPRESSION TAG SEQADV 6GY2 GLU A 363 UNP P53350 EXPRESSION TAG SEQADV 6GY2 PHE A 364 UNP P53350 EXPRESSION TAG SEQADV 6GY2 ALA B 359 UNP P53350 EXPRESSION TAG SEQADV 6GY2 MET B 360 UNP P53350 EXPRESSION TAG SEQADV 6GY2 ASP B 361 UNP P53350 EXPRESSION TAG SEQADV 6GY2 PRO B 362 UNP P53350 EXPRESSION TAG SEQADV 6GY2 GLU B 363 UNP P53350 EXPRESSION TAG SEQADV 6GY2 PHE B 364 UNP P53350 EXPRESSION TAG SEQRES 1 A 245 ALA MET ASP PRO GLU PHE GLU THR GLY GLU VAL VAL ASP SEQRES 2 A 245 CYS HIS LEU SER ASP MET LEU GLN GLN LEU HIS SER VAL SEQRES 3 A 245 ASN ALA SER LYS PRO SER GLU ARG GLY LEU VAL ARG GLN SEQRES 4 A 245 GLU GLU ALA GLU ASP PRO ALA CYS ILE PRO ILE PHE TRP SEQRES 5 A 245 VAL SER LYS TRP VAL ASP TYR SER ASP LYS TYR GLY LEU SEQRES 6 A 245 GLY TYR GLN LEU CYS ASP ASN SER VAL GLY VAL LEU PHE SEQRES 7 A 245 ASN ASP SER THR ARG LEU ILE LEU TYR ASN ASP GLY ASP SEQRES 8 A 245 SER LEU GLN TYR ILE GLU ARG ASP GLY THR GLU SER TYR SEQRES 9 A 245 LEU THR VAL SER SER HIS PRO ASN SER LEU MET LYS LYS SEQRES 10 A 245 ILE THR LEU LEU LYS TYR PHE ARG ASN TYR MET SER GLU SEQRES 11 A 245 HIS LEU LEU LYS ALA GLY ALA ASN ILE THR PRO ARG GLU SEQRES 12 A 245 GLY ASP GLU LEU ALA ARG LEU PRO TYR LEU ARG THR TRP SEQRES 13 A 245 PHE ARG THR ARG SER ALA ILE ILE LEU HIS LEU SER ASN SEQRES 14 A 245 GLY SER VAL GLN ILE ASN PHE PHE GLN ASP HIS THR LYS SEQRES 15 A 245 LEU ILE LEU CYS PRO LEU MET ALA ALA VAL THR TYR ILE SEQRES 16 A 245 ASP GLU LYS ARG ASP PHE ARG THR TYR ARG LEU SER LEU SEQRES 17 A 245 LEU GLU GLU TYR GLY CYS CYS LYS GLU LEU ALA SER ARG SEQRES 18 A 245 LEU ARG TYR ALA ARG THR MET VAL ASP LYS LEU LEU SER SEQRES 19 A 245 SER ARG SER ALA SER ASN ARG LEU LYS ALA SER SEQRES 1 B 245 ALA MET ASP PRO GLU PHE GLU THR GLY GLU VAL VAL ASP SEQRES 2 B 245 CYS HIS LEU SER ASP MET LEU GLN GLN LEU HIS SER VAL SEQRES 3 B 245 ASN ALA SER LYS PRO SER GLU ARG GLY LEU VAL ARG GLN SEQRES 4 B 245 GLU GLU ALA GLU ASP PRO ALA CYS ILE PRO ILE PHE TRP SEQRES 5 B 245 VAL SER LYS TRP VAL ASP TYR SER ASP LYS TYR GLY LEU SEQRES 6 B 245 GLY TYR GLN LEU CYS ASP ASN SER VAL GLY VAL LEU PHE SEQRES 7 B 245 ASN ASP SER THR ARG LEU ILE LEU TYR ASN ASP GLY ASP SEQRES 8 B 245 SER LEU GLN TYR ILE GLU ARG ASP GLY THR GLU SER TYR SEQRES 9 B 245 LEU THR VAL SER SER HIS PRO ASN SER LEU MET LYS LYS SEQRES 10 B 245 ILE THR LEU LEU LYS TYR PHE ARG ASN TYR MET SER GLU SEQRES 11 B 245 HIS LEU LEU LYS ALA GLY ALA ASN ILE THR PRO ARG GLU SEQRES 12 B 245 GLY ASP GLU LEU ALA ARG LEU PRO TYR LEU ARG THR TRP SEQRES 13 B 245 PHE ARG THR ARG SER ALA ILE ILE LEU HIS LEU SER ASN SEQRES 14 B 245 GLY SER VAL GLN ILE ASN PHE PHE GLN ASP HIS THR LYS SEQRES 15 B 245 LEU ILE LEU CYS PRO LEU MET ALA ALA VAL THR TYR ILE SEQRES 16 B 245 ASP GLU LYS ARG ASP PHE ARG THR TYR ARG LEU SER LEU SEQRES 17 B 245 LEU GLU GLU TYR GLY CYS CYS LYS GLU LEU ALA SER ARG SEQRES 18 B 245 LEU ARG TYR ALA ARG THR MET VAL ASP LYS LEU LEU SER SEQRES 19 B 245 SER ARG SER ALA SER ASN ARG LEU LYS ALA SER SEQRES 1 C 17 TRP SER SER SER LEU ALA THR PRO PRO THR LEU SER SER SEQRES 2 C 17 TPO VAL LEU ILE SEQRES 1 D 17 TRP SER SER SER LEU ALA THR PRO PRO THR LEU SER SER SEQRES 2 D 17 TPO VAL LEU ILE HET TPO C 207 11 HET TPO D 207 11 HET GOL A 701 6 HETNAM TPO PHOSPHOTHREONINE HETNAM GOL GLYCEROL HETSYN TPO PHOSPHONOTHREONINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 TPO 2(C4 H10 N O6 P) FORMUL 5 GOL C3 H8 O3 FORMUL 6 HOH *22(H2 O) HELIX 1 AA1 CYS A 372 SER A 387 1 16 HELIX 2 AA2 LYS A 388 ARG A 392 5 5 HELIX 3 AA3 ARG A 396 GLU A 401 5 6 HELIX 4 AA4 ASP A 402 ILE A 406 5 5 HELIX 5 AA5 PRO A 469 SER A 471 5 3 HELIX 6 AA6 LEU A 472 LEU A 490 1 19 HELIX 7 AA7 GLY A 502 ALA A 506 5 5 HELIX 8 AA8 LEU A 564 GLY A 571 1 8 HELIX 9 AA9 CYS A 573 SER A 593 1 21 HELIX 10 AB1 CYS B 372 SER B 387 1 16 HELIX 11 AB2 LYS B 388 ARG B 392 5 5 HELIX 12 AB3 ARG B 396 GLU B 401 5 6 HELIX 13 AB4 ASP B 402 ILE B 406 5 5 HELIX 14 AB5 PRO B 469 SER B 471 5 3 HELIX 15 AB6 LEU B 472 LEU B 490 1 19 HELIX 16 AB7 GLY B 502 ALA B 506 5 5 HELIX 17 AB8 LEU B 564 GLY B 571 1 8 HELIX 18 AB9 CYS B 573 ARG B 594 1 22 SHEET 1 AA1 7 GLU A 460 THR A 464 0 SHEET 2 AA1 7 SER A 450 ILE A 454 -1 N LEU A 451 O LEU A 463 SHEET 3 AA1 7 ARG A 441 LEU A 444 -1 N ARG A 441 O ILE A 454 SHEET 4 AA1 7 VAL A 432 PHE A 436 -1 N VAL A 432 O LEU A 444 SHEET 5 AA1 7 GLY A 422 LEU A 427 -1 N TYR A 425 O GLY A 433 SHEET 6 AA1 7 VAL A 411 TYR A 417 -1 N VAL A 415 O GLY A 424 SHEET 7 AA1 7 LEU D 204 SER D 205 -1 O LEU D 204 N ASP A 416 SHEET 1 AA2 6 LEU A 511 ARG A 516 0 SHEET 2 AA2 6 ALA A 520 LEU A 525 -1 O ILE A 522 N PHE A 515 SHEET 3 AA2 6 VAL A 530 PHE A 534 -1 O GLN A 531 N LEU A 523 SHEET 4 AA2 6 LYS A 540 CYS A 544 -1 O LEU A 543 N VAL A 530 SHEET 5 AA2 6 ALA A 549 ILE A 553 -1 O THR A 551 N ILE A 542 SHEET 6 AA2 6 PHE A 559 ARG A 563 -1 O ARG A 560 N TYR A 552 SHEET 1 AA3 7 GLU B 460 THR B 464 0 SHEET 2 AA3 7 SER B 450 ILE B 454 -1 N LEU B 451 O LEU B 463 SHEET 3 AA3 7 ARG B 441 LEU B 444 -1 N ARG B 441 O ILE B 454 SHEET 4 AA3 7 VAL B 432 PHE B 436 -1 N VAL B 432 O LEU B 444 SHEET 5 AA3 7 GLY B 422 LEU B 427 -1 N TYR B 425 O GLY B 433 SHEET 6 AA3 7 VAL B 411 TYR B 417 -1 N VAL B 415 O GLY B 424 SHEET 7 AA3 7 LEU C 204 SER C 205 -1 O LEU C 204 N ASP B 416 SHEET 1 AA4 6 LEU B 511 ARG B 516 0 SHEET 2 AA4 6 ALA B 520 LEU B 525 -1 O ILE B 522 N PHE B 515 SHEET 3 AA4 6 VAL B 530 PHE B 534 -1 O GLN B 531 N LEU B 523 SHEET 4 AA4 6 LYS B 540 CYS B 544 -1 O LEU B 543 N VAL B 530 SHEET 5 AA4 6 ALA B 549 ILE B 553 -1 O THR B 551 N ILE B 542 SHEET 6 AA4 6 PHE B 559 ARG B 563 -1 O ARG B 560 N TYR B 552 LINK C SER C 206 N TPO C 207 1555 1555 1.35 LINK C TPO C 207 N VAL C 208 1555 1555 1.34 LINK C SER D 206 N TPO D 207 1555 1555 1.35 LINK C TPO D 207 N VAL D 208 1555 1555 1.34 SITE 1 AC1 6 GLY A 393 LEU A 394 VAL A 395 TYR A 453 SITE 2 AC1 6 SER A 471 LYS A 475 SITE 1 AC2 8 HIS B 489 LEU B 490 LEU B 491 HIS B 538 SITE 2 AC2 8 LYS B 540 SER C 206 LEU C 209 HOH C 301 SITE 1 AC3 10 HIS A 489 LEU A 490 LEU A 491 HIS A 538 SITE 2 AC3 10 LYS A 540 HOH A 801 SER D 206 LEU D 209 SITE 3 AC3 10 HOH D 301 HOH D 302 CRYST1 50.000 56.040 61.030 80.79 79.23 65.05 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020000 -0.009305 -0.002968 0.00000 SCALE2 0.000000 0.019681 -0.001802 0.00000 SCALE3 0.000000 0.000000 0.016749 0.00000