data_6GY3 # _entry.id 6GY3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6GY3 pdb_00006gy3 10.2210/pdb6gy3/pdb WWPDB D_1200010705 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-07-10 2 'Structure model' 1 1 2020-03-18 3 'Structure model' 1 2 2024-01-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Derived calculations' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_struct_assembly 2 2 'Structure model' pdbx_struct_assembly_gen 3 2 'Structure model' pdbx_struct_assembly_prop 4 3 'Structure model' chem_comp_atom 5 3 'Structure model' chem_comp_bond 6 3 'Structure model' database_2 7 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6GY3 _pdbx_database_status.recvd_initial_deposition_date 2018-06-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Sevvana, M.' 1 ? 'Muller, Y.A.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To be published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'The role of DNA flexibility in transcription regulator AmtR-DNA interaction' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Schwab, C.' 1 ? primary 'Sevvana, M.' 2 ? primary 'Seidel, G.' 3 ? primary 'Sandmann, A.' 4 ? primary 'Grau, F.C.' 5 ? primary 'Muller, Y.A.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'AmtR protein' 22327.311 2 ? ? ? ;first 14 residues cleaved off due to factor Xa protease treatment electron density allowed tracing of residues 19-220 in both protomers ; 2 polymer syn ;DNA (5'-D(*GP*TP*CP*TP*AP*TP*AP*GP*AP*TP*CP*GP*AP*TP*AP*GP*AP*C)-3') ; 5539.616 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*GP*TP*CP*TP*AP*TP*CP*GP*AP*TP*CP*TP*AP*TP*AP*GP*AP*C)-3') ; 5490.578 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;NPREEILDASAELFTRQGFATTSTHQIADAVGIRQASLYYHFPSKTEIFLTLLKSTVEPSTVLAEDLSTLDAGPEMRLWA IVASEVRLLLSTKWNVGRLYQLPIVGSEEFAEYHSQREALTNVFRDLATEIVGDDPRAELPFHITMSVIEMRRNDGKIPS PLSADSLPETAIMLADASLAVLGAPLPADRVEKTLELIKQAD ; ;NPREEILDASAELFTRQGFATTSTHQIADAVGIRQASLYYHFPSKTEIFLTLLKSTVEPSTVLAEDLSTLDAGPEMRLWA IVASEVRLLLSTKWNVGRLYQLPIVGSEEFAEYHSQREALTNVFRDLATEIVGDDPRAELPFHITMSVIEMRRNDGKIPS PLSADSLPETAIMLADASLAVLGAPLPADRVEKTLELIKQAD ; A,B ? 2 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DT)(DA)(DT)(DA)(DG)(DA)(DT)(DC)(DG)(DA)(DT)(DA)(DG)(DA)(DC)' GTCTATAGATCGATAGAC C ? 3 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DT)(DA)(DT)(DC)(DG)(DA)(DT)(DC)(DT)(DA)(DT)(DA)(DG)(DA)(DC)' GTCTATCGATCTATAGAC D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 PRO n 1 3 ARG n 1 4 GLU n 1 5 GLU n 1 6 ILE n 1 7 LEU n 1 8 ASP n 1 9 ALA n 1 10 SER n 1 11 ALA n 1 12 GLU n 1 13 LEU n 1 14 PHE n 1 15 THR n 1 16 ARG n 1 17 GLN n 1 18 GLY n 1 19 PHE n 1 20 ALA n 1 21 THR n 1 22 THR n 1 23 SER n 1 24 THR n 1 25 HIS n 1 26 GLN n 1 27 ILE n 1 28 ALA n 1 29 ASP n 1 30 ALA n 1 31 VAL n 1 32 GLY n 1 33 ILE n 1 34 ARG n 1 35 GLN n 1 36 ALA n 1 37 SER n 1 38 LEU n 1 39 TYR n 1 40 TYR n 1 41 HIS n 1 42 PHE n 1 43 PRO n 1 44 SER n 1 45 LYS n 1 46 THR n 1 47 GLU n 1 48 ILE n 1 49 PHE n 1 50 LEU n 1 51 THR n 1 52 LEU n 1 53 LEU n 1 54 LYS n 1 55 SER n 1 56 THR n 1 57 VAL n 1 58 GLU n 1 59 PRO n 1 60 SER n 1 61 THR n 1 62 VAL n 1 63 LEU n 1 64 ALA n 1 65 GLU n 1 66 ASP n 1 67 LEU n 1 68 SER n 1 69 THR n 1 70 LEU n 1 71 ASP n 1 72 ALA n 1 73 GLY n 1 74 PRO n 1 75 GLU n 1 76 MET n 1 77 ARG n 1 78 LEU n 1 79 TRP n 1 80 ALA n 1 81 ILE n 1 82 VAL n 1 83 ALA n 1 84 SER n 1 85 GLU n 1 86 VAL n 1 87 ARG n 1 88 LEU n 1 89 LEU n 1 90 LEU n 1 91 SER n 1 92 THR n 1 93 LYS n 1 94 TRP n 1 95 ASN n 1 96 VAL n 1 97 GLY n 1 98 ARG n 1 99 LEU n 1 100 TYR n 1 101 GLN n 1 102 LEU n 1 103 PRO n 1 104 ILE n 1 105 VAL n 1 106 GLY n 1 107 SER n 1 108 GLU n 1 109 GLU n 1 110 PHE n 1 111 ALA n 1 112 GLU n 1 113 TYR n 1 114 HIS n 1 115 SER n 1 116 GLN n 1 117 ARG n 1 118 GLU n 1 119 ALA n 1 120 LEU n 1 121 THR n 1 122 ASN n 1 123 VAL n 1 124 PHE n 1 125 ARG n 1 126 ASP n 1 127 LEU n 1 128 ALA n 1 129 THR n 1 130 GLU n 1 131 ILE n 1 132 VAL n 1 133 GLY n 1 134 ASP n 1 135 ASP n 1 136 PRO n 1 137 ARG n 1 138 ALA n 1 139 GLU n 1 140 LEU n 1 141 PRO n 1 142 PHE n 1 143 HIS n 1 144 ILE n 1 145 THR n 1 146 MET n 1 147 SER n 1 148 VAL n 1 149 ILE n 1 150 GLU n 1 151 MET n 1 152 ARG n 1 153 ARG n 1 154 ASN n 1 155 ASP n 1 156 GLY n 1 157 LYS n 1 158 ILE n 1 159 PRO n 1 160 SER n 1 161 PRO n 1 162 LEU n 1 163 SER n 1 164 ALA n 1 165 ASP n 1 166 SER n 1 167 LEU n 1 168 PRO n 1 169 GLU n 1 170 THR n 1 171 ALA n 1 172 ILE n 1 173 MET n 1 174 LEU n 1 175 ALA n 1 176 ASP n 1 177 ALA n 1 178 SER n 1 179 LEU n 1 180 ALA n 1 181 VAL n 1 182 LEU n 1 183 GLY n 1 184 ALA n 1 185 PRO n 1 186 LEU n 1 187 PRO n 1 188 ALA n 1 189 ASP n 1 190 ARG n 1 191 VAL n 1 192 GLU n 1 193 LYS n 1 194 THR n 1 195 LEU n 1 196 GLU n 1 197 LEU n 1 198 ILE n 1 199 LYS n 1 200 GLN n 1 201 ALA n 1 202 ASP n 2 1 DG n 2 2 DT n 2 3 DC n 2 4 DT n 2 5 DA n 2 6 DT n 2 7 DA n 2 8 DG n 2 9 DA n 2 10 DT n 2 11 DC n 2 12 DG n 2 13 DA n 2 14 DT n 2 15 DA n 2 16 DG n 2 17 DA n 2 18 DC n 3 1 DG n 3 2 DT n 3 3 DC n 3 4 DT n 3 5 DA n 3 6 DT n 3 7 DC n 3 8 DG n 3 9 DA n 3 10 DT n 3 11 DC n 3 12 DT n 3 13 DA n 3 14 DT n 3 15 DA n 3 16 DG n 3 17 DA n 3 18 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 202 _entity_src_gen.gene_src_common_name 'Brevibacterium saccharolyticum' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene amtR _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Corynebacterium glutamicum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1718 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMALc2 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 18 'Corynebacterium glutamicum' ? 1718 ? 3 1 sample 1 18 'Corynebacterium glutamicum' ? 1718 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 19 19 ASN ASN A . n A 1 2 PRO 2 20 20 PRO PRO A . n A 1 3 ARG 3 21 21 ARG ARG A . n A 1 4 GLU 4 22 22 GLU GLU A . n A 1 5 GLU 5 23 23 GLU GLU A . n A 1 6 ILE 6 24 24 ILE ILE A . n A 1 7 LEU 7 25 25 LEU LEU A . n A 1 8 ASP 8 26 26 ASP ASP A . n A 1 9 ALA 9 27 27 ALA ALA A . n A 1 10 SER 10 28 28 SER SER A . n A 1 11 ALA 11 29 29 ALA ALA A . n A 1 12 GLU 12 30 30 GLU GLU A . n A 1 13 LEU 13 31 31 LEU LEU A . n A 1 14 PHE 14 32 32 PHE PHE A . n A 1 15 THR 15 33 33 THR THR A . n A 1 16 ARG 16 34 34 ARG ARG A . n A 1 17 GLN 17 35 35 GLN GLN A . n A 1 18 GLY 18 36 36 GLY GLY A . n A 1 19 PHE 19 37 37 PHE PHE A . n A 1 20 ALA 20 38 38 ALA ALA A . n A 1 21 THR 21 39 39 THR THR A . n A 1 22 THR 22 40 40 THR THR A . n A 1 23 SER 23 41 41 SER SER A . n A 1 24 THR 24 42 42 THR THR A . n A 1 25 HIS 25 43 43 HIS HIS A . n A 1 26 GLN 26 44 44 GLN GLN A . n A 1 27 ILE 27 45 45 ILE ILE A . n A 1 28 ALA 28 46 46 ALA ALA A . n A 1 29 ASP 29 47 47 ASP ASP A . n A 1 30 ALA 30 48 48 ALA ALA A . n A 1 31 VAL 31 49 49 VAL VAL A . n A 1 32 GLY 32 50 50 GLY GLY A . n A 1 33 ILE 33 51 51 ILE ILE A . n A 1 34 ARG 34 52 52 ARG ARG A . n A 1 35 GLN 35 53 53 GLN GLN A . n A 1 36 ALA 36 54 54 ALA ALA A . n A 1 37 SER 37 55 55 SER SER A . n A 1 38 LEU 38 56 56 LEU LEU A . n A 1 39 TYR 39 57 57 TYR TYR A . n A 1 40 TYR 40 58 58 TYR TYR A . n A 1 41 HIS 41 59 59 HIS HIS A . n A 1 42 PHE 42 60 60 PHE PHE A . n A 1 43 PRO 43 61 61 PRO PRO A . n A 1 44 SER 44 62 62 SER SER A . n A 1 45 LYS 45 63 63 LYS LYS A . n A 1 46 THR 46 64 64 THR THR A . n A 1 47 GLU 47 65 65 GLU GLU A . n A 1 48 ILE 48 66 66 ILE ILE A . n A 1 49 PHE 49 67 67 PHE PHE A . n A 1 50 LEU 50 68 68 LEU LEU A . n A 1 51 THR 51 69 69 THR THR A . n A 1 52 LEU 52 70 70 LEU LEU A . n A 1 53 LEU 53 71 71 LEU LEU A . n A 1 54 LYS 54 72 72 LYS LYS A . n A 1 55 SER 55 73 73 SER SER A . n A 1 56 THR 56 74 74 THR THR A . n A 1 57 VAL 57 75 75 VAL VAL A . n A 1 58 GLU 58 76 76 GLU GLU A . n A 1 59 PRO 59 77 77 PRO PRO A . n A 1 60 SER 60 78 78 SER SER A . n A 1 61 THR 61 79 79 THR THR A . n A 1 62 VAL 62 80 80 VAL VAL A . n A 1 63 LEU 63 81 81 LEU LEU A . n A 1 64 ALA 64 82 82 ALA ALA A . n A 1 65 GLU 65 83 83 GLU GLU A . n A 1 66 ASP 66 84 84 ASP ASP A . n A 1 67 LEU 67 85 85 LEU LEU A . n A 1 68 SER 68 86 86 SER SER A . n A 1 69 THR 69 87 87 THR THR A . n A 1 70 LEU 70 88 88 LEU LEU A . n A 1 71 ASP 71 89 89 ASP ASP A . n A 1 72 ALA 72 90 90 ALA ALA A . n A 1 73 GLY 73 91 91 GLY GLY A . n A 1 74 PRO 74 92 92 PRO PRO A . n A 1 75 GLU 75 93 93 GLU GLU A . n A 1 76 MET 76 94 94 MET MET A . n A 1 77 ARG 77 95 95 ARG ARG A . n A 1 78 LEU 78 96 96 LEU LEU A . n A 1 79 TRP 79 97 97 TRP TRP A . n A 1 80 ALA 80 98 98 ALA ALA A . n A 1 81 ILE 81 99 99 ILE ILE A . n A 1 82 VAL 82 100 100 VAL VAL A . n A 1 83 ALA 83 101 101 ALA ALA A . n A 1 84 SER 84 102 102 SER SER A . n A 1 85 GLU 85 103 103 GLU GLU A . n A 1 86 VAL 86 104 104 VAL VAL A . n A 1 87 ARG 87 105 105 ARG ARG A . n A 1 88 LEU 88 106 106 LEU LEU A . n A 1 89 LEU 89 107 107 LEU LEU A . n A 1 90 LEU 90 108 108 LEU LEU A . n A 1 91 SER 91 109 109 SER SER A . n A 1 92 THR 92 110 110 THR THR A . n A 1 93 LYS 93 111 111 LYS LYS A . n A 1 94 TRP 94 112 112 TRP TRP A . n A 1 95 ASN 95 113 113 ASN ASN A . n A 1 96 VAL 96 114 114 VAL VAL A . n A 1 97 GLY 97 115 115 GLY GLY A . n A 1 98 ARG 98 116 116 ARG ARG A . n A 1 99 LEU 99 117 117 LEU LEU A . n A 1 100 TYR 100 118 118 TYR TYR A . n A 1 101 GLN 101 119 119 GLN GLN A . n A 1 102 LEU 102 120 120 LEU LEU A . n A 1 103 PRO 103 121 121 PRO PRO A . n A 1 104 ILE 104 122 122 ILE ILE A . n A 1 105 VAL 105 123 123 VAL VAL A . n A 1 106 GLY 106 124 124 GLY GLY A . n A 1 107 SER 107 125 125 SER SER A . n A 1 108 GLU 108 126 126 GLU GLU A . n A 1 109 GLU 109 127 127 GLU GLU A . n A 1 110 PHE 110 128 128 PHE PHE A . n A 1 111 ALA 111 129 129 ALA ALA A . n A 1 112 GLU 112 130 130 GLU GLU A . n A 1 113 TYR 113 131 131 TYR TYR A . n A 1 114 HIS 114 132 132 HIS HIS A . n A 1 115 SER 115 133 133 SER SER A . n A 1 116 GLN 116 134 134 GLN GLN A . n A 1 117 ARG 117 135 135 ARG ARG A . n A 1 118 GLU 118 136 136 GLU GLU A . n A 1 119 ALA 119 137 137 ALA ALA A . n A 1 120 LEU 120 138 138 LEU LEU A . n A 1 121 THR 121 139 139 THR THR A . n A 1 122 ASN 122 140 140 ASN ASN A . n A 1 123 VAL 123 141 141 VAL VAL A . n A 1 124 PHE 124 142 142 PHE PHE A . n A 1 125 ARG 125 143 143 ARG ARG A . n A 1 126 ASP 126 144 144 ASP ASP A . n A 1 127 LEU 127 145 145 LEU LEU A . n A 1 128 ALA 128 146 146 ALA ALA A . n A 1 129 THR 129 147 147 THR THR A . n A 1 130 GLU 130 148 148 GLU GLU A . n A 1 131 ILE 131 149 149 ILE ILE A . n A 1 132 VAL 132 150 150 VAL VAL A . n A 1 133 GLY 133 151 151 GLY GLY A . n A 1 134 ASP 134 152 152 ASP ASP A . n A 1 135 ASP 135 153 153 ASP ASP A . n A 1 136 PRO 136 154 154 PRO PRO A . n A 1 137 ARG 137 155 155 ARG ARG A . n A 1 138 ALA 138 156 156 ALA ALA A . n A 1 139 GLU 139 157 157 GLU GLU A . n A 1 140 LEU 140 158 158 LEU LEU A . n A 1 141 PRO 141 159 159 PRO PRO A . n A 1 142 PHE 142 160 160 PHE PHE A . n A 1 143 HIS 143 161 161 HIS HIS A . n A 1 144 ILE 144 162 162 ILE ILE A . n A 1 145 THR 145 163 163 THR THR A . n A 1 146 MET 146 164 164 MET MET A . n A 1 147 SER 147 165 165 SER SER A . n A 1 148 VAL 148 166 166 VAL VAL A . n A 1 149 ILE 149 167 167 ILE ILE A . n A 1 150 GLU 150 168 168 GLU GLU A . n A 1 151 MET 151 169 169 MET MET A . n A 1 152 ARG 152 170 170 ARG ARG A . n A 1 153 ARG 153 171 171 ARG ARG A . n A 1 154 ASN 154 172 172 ASN ASN A . n A 1 155 ASP 155 173 173 ASP ASP A . n A 1 156 GLY 156 174 174 GLY GLY A . n A 1 157 LYS 157 175 175 LYS LYS A . n A 1 158 ILE 158 176 176 ILE ILE A . n A 1 159 PRO 159 177 177 PRO PRO A . n A 1 160 SER 160 178 178 SER SER A . n A 1 161 PRO 161 179 179 PRO PRO A . n A 1 162 LEU 162 180 180 LEU LEU A . n A 1 163 SER 163 181 181 SER SER A . n A 1 164 ALA 164 182 182 ALA ALA A . n A 1 165 ASP 165 183 183 ASP ASP A . n A 1 166 SER 166 184 184 SER SER A . n A 1 167 LEU 167 185 185 LEU LEU A . n A 1 168 PRO 168 186 186 PRO PRO A . n A 1 169 GLU 169 187 187 GLU GLU A . n A 1 170 THR 170 188 188 THR THR A . n A 1 171 ALA 171 189 189 ALA ALA A . n A 1 172 ILE 172 190 190 ILE ILE A . n A 1 173 MET 173 191 191 MET MET A . n A 1 174 LEU 174 192 192 LEU LEU A . n A 1 175 ALA 175 193 193 ALA ALA A . n A 1 176 ASP 176 194 194 ASP ASP A . n A 1 177 ALA 177 195 195 ALA ALA A . n A 1 178 SER 178 196 196 SER SER A . n A 1 179 LEU 179 197 197 LEU LEU A . n A 1 180 ALA 180 198 198 ALA ALA A . n A 1 181 VAL 181 199 199 VAL VAL A . n A 1 182 LEU 182 200 200 LEU LEU A . n A 1 183 GLY 183 201 201 GLY GLY A . n A 1 184 ALA 184 202 202 ALA ALA A . n A 1 185 PRO 185 203 203 PRO PRO A . n A 1 186 LEU 186 204 204 LEU LEU A . n A 1 187 PRO 187 205 205 PRO PRO A . n A 1 188 ALA 188 206 206 ALA ALA A . n A 1 189 ASP 189 207 207 ASP ASP A . n A 1 190 ARG 190 208 208 ARG ARG A . n A 1 191 VAL 191 209 209 VAL VAL A . n A 1 192 GLU 192 210 210 GLU GLU A . n A 1 193 LYS 193 211 211 LYS LYS A . n A 1 194 THR 194 212 212 THR THR A . n A 1 195 LEU 195 213 213 LEU LEU A . n A 1 196 GLU 196 214 214 GLU GLU A . n A 1 197 LEU 197 215 215 LEU LEU A . n A 1 198 ILE 198 216 216 ILE ILE A . n A 1 199 LYS 199 217 217 LYS LYS A . n A 1 200 GLN 200 218 218 GLN GLN A . n A 1 201 ALA 201 219 219 ALA ALA A . n A 1 202 ASP 202 220 220 ASP ASP A . n B 1 1 ASN 1 19 19 ASN ASN B . n B 1 2 PRO 2 20 20 PRO PRO B . n B 1 3 ARG 3 21 21 ARG ARG B . n B 1 4 GLU 4 22 22 GLU GLU B . n B 1 5 GLU 5 23 23 GLU GLU B . n B 1 6 ILE 6 24 24 ILE ILE B . n B 1 7 LEU 7 25 25 LEU LEU B . n B 1 8 ASP 8 26 26 ASP ASP B . n B 1 9 ALA 9 27 27 ALA ALA B . n B 1 10 SER 10 28 28 SER SER B . n B 1 11 ALA 11 29 29 ALA ALA B . n B 1 12 GLU 12 30 30 GLU GLU B . n B 1 13 LEU 13 31 31 LEU LEU B . n B 1 14 PHE 14 32 32 PHE PHE B . n B 1 15 THR 15 33 33 THR THR B . n B 1 16 ARG 16 34 34 ARG ARG B . n B 1 17 GLN 17 35 35 GLN GLN B . n B 1 18 GLY 18 36 36 GLY GLY B . n B 1 19 PHE 19 37 37 PHE PHE B . n B 1 20 ALA 20 38 38 ALA ALA B . n B 1 21 THR 21 39 39 THR THR B . n B 1 22 THR 22 40 40 THR THR B . n B 1 23 SER 23 41 41 SER SER B . n B 1 24 THR 24 42 42 THR THR B . n B 1 25 HIS 25 43 43 HIS HIS B . n B 1 26 GLN 26 44 44 GLN GLN B . n B 1 27 ILE 27 45 45 ILE ILE B . n B 1 28 ALA 28 46 46 ALA ALA B . n B 1 29 ASP 29 47 47 ASP ASP B . n B 1 30 ALA 30 48 48 ALA ALA B . n B 1 31 VAL 31 49 49 VAL VAL B . n B 1 32 GLY 32 50 50 GLY GLY B . n B 1 33 ILE 33 51 51 ILE ILE B . n B 1 34 ARG 34 52 52 ARG ARG B . n B 1 35 GLN 35 53 53 GLN GLN B . n B 1 36 ALA 36 54 54 ALA ALA B . n B 1 37 SER 37 55 55 SER SER B . n B 1 38 LEU 38 56 56 LEU LEU B . n B 1 39 TYR 39 57 57 TYR TYR B . n B 1 40 TYR 40 58 58 TYR TYR B . n B 1 41 HIS 41 59 59 HIS HIS B . n B 1 42 PHE 42 60 60 PHE PHE B . n B 1 43 PRO 43 61 61 PRO PRO B . n B 1 44 SER 44 62 62 SER SER B . n B 1 45 LYS 45 63 63 LYS LYS B . n B 1 46 THR 46 64 64 THR THR B . n B 1 47 GLU 47 65 65 GLU GLU B . n B 1 48 ILE 48 66 66 ILE ILE B . n B 1 49 PHE 49 67 67 PHE PHE B . n B 1 50 LEU 50 68 68 LEU LEU B . n B 1 51 THR 51 69 69 THR THR B . n B 1 52 LEU 52 70 70 LEU LEU B . n B 1 53 LEU 53 71 71 LEU LEU B . n B 1 54 LYS 54 72 72 LYS LYS B . n B 1 55 SER 55 73 73 SER SER B . n B 1 56 THR 56 74 74 THR THR B . n B 1 57 VAL 57 75 75 VAL VAL B . n B 1 58 GLU 58 76 76 GLU GLU B . n B 1 59 PRO 59 77 77 PRO PRO B . n B 1 60 SER 60 78 78 SER SER B . n B 1 61 THR 61 79 79 THR THR B . n B 1 62 VAL 62 80 80 VAL VAL B . n B 1 63 LEU 63 81 81 LEU LEU B . n B 1 64 ALA 64 82 82 ALA ALA B . n B 1 65 GLU 65 83 83 GLU GLU B . n B 1 66 ASP 66 84 84 ASP ASP B . n B 1 67 LEU 67 85 85 LEU LEU B . n B 1 68 SER 68 86 86 SER SER B . n B 1 69 THR 69 87 87 THR THR B . n B 1 70 LEU 70 88 88 LEU LEU B . n B 1 71 ASP 71 89 89 ASP ASP B . n B 1 72 ALA 72 90 90 ALA ALA B . n B 1 73 GLY 73 91 91 GLY GLY B . n B 1 74 PRO 74 92 92 PRO PRO B . n B 1 75 GLU 75 93 93 GLU GLU B . n B 1 76 MET 76 94 94 MET MET B . n B 1 77 ARG 77 95 95 ARG ARG B . n B 1 78 LEU 78 96 96 LEU LEU B . n B 1 79 TRP 79 97 97 TRP TRP B . n B 1 80 ALA 80 98 98 ALA ALA B . n B 1 81 ILE 81 99 99 ILE ILE B . n B 1 82 VAL 82 100 100 VAL VAL B . n B 1 83 ALA 83 101 101 ALA ALA B . n B 1 84 SER 84 102 102 SER SER B . n B 1 85 GLU 85 103 103 GLU GLU B . n B 1 86 VAL 86 104 104 VAL VAL B . n B 1 87 ARG 87 105 105 ARG ARG B . n B 1 88 LEU 88 106 106 LEU LEU B . n B 1 89 LEU 89 107 107 LEU LEU B . n B 1 90 LEU 90 108 108 LEU LEU B . n B 1 91 SER 91 109 109 SER SER B . n B 1 92 THR 92 110 110 THR THR B . n B 1 93 LYS 93 111 111 LYS LYS B . n B 1 94 TRP 94 112 112 TRP TRP B . n B 1 95 ASN 95 113 113 ASN ASN B . n B 1 96 VAL 96 114 114 VAL VAL B . n B 1 97 GLY 97 115 115 GLY GLY B . n B 1 98 ARG 98 116 116 ARG ARG B . n B 1 99 LEU 99 117 117 LEU LEU B . n B 1 100 TYR 100 118 118 TYR TYR B . n B 1 101 GLN 101 119 119 GLN GLN B . n B 1 102 LEU 102 120 120 LEU LEU B . n B 1 103 PRO 103 121 121 PRO PRO B . n B 1 104 ILE 104 122 122 ILE ILE B . n B 1 105 VAL 105 123 123 VAL VAL B . n B 1 106 GLY 106 124 124 GLY GLY B . n B 1 107 SER 107 125 125 SER SER B . n B 1 108 GLU 108 126 126 GLU GLU B . n B 1 109 GLU 109 127 127 GLU GLU B . n B 1 110 PHE 110 128 128 PHE PHE B . n B 1 111 ALA 111 129 129 ALA ALA B . n B 1 112 GLU 112 130 130 GLU GLU B . n B 1 113 TYR 113 131 131 TYR TYR B . n B 1 114 HIS 114 132 132 HIS HIS B . n B 1 115 SER 115 133 133 SER SER B . n B 1 116 GLN 116 134 134 GLN GLN B . n B 1 117 ARG 117 135 135 ARG ARG B . n B 1 118 GLU 118 136 136 GLU GLU B . n B 1 119 ALA 119 137 137 ALA ALA B . n B 1 120 LEU 120 138 138 LEU LEU B . n B 1 121 THR 121 139 139 THR THR B . n B 1 122 ASN 122 140 140 ASN ASN B . n B 1 123 VAL 123 141 141 VAL VAL B . n B 1 124 PHE 124 142 142 PHE PHE B . n B 1 125 ARG 125 143 143 ARG ARG B . n B 1 126 ASP 126 144 144 ASP ASP B . n B 1 127 LEU 127 145 145 LEU LEU B . n B 1 128 ALA 128 146 146 ALA ALA B . n B 1 129 THR 129 147 147 THR THR B . n B 1 130 GLU 130 148 148 GLU GLU B . n B 1 131 ILE 131 149 149 ILE ILE B . n B 1 132 VAL 132 150 150 VAL VAL B . n B 1 133 GLY 133 151 151 GLY GLY B . n B 1 134 ASP 134 152 152 ASP ASP B . n B 1 135 ASP 135 153 153 ASP ASP B . n B 1 136 PRO 136 154 154 PRO PRO B . n B 1 137 ARG 137 155 155 ARG ARG B . n B 1 138 ALA 138 156 156 ALA ALA B . n B 1 139 GLU 139 157 157 GLU GLU B . n B 1 140 LEU 140 158 158 LEU LEU B . n B 1 141 PRO 141 159 159 PRO PRO B . n B 1 142 PHE 142 160 160 PHE PHE B . n B 1 143 HIS 143 161 161 HIS HIS B . n B 1 144 ILE 144 162 162 ILE ILE B . n B 1 145 THR 145 163 163 THR THR B . n B 1 146 MET 146 164 164 MET MET B . n B 1 147 SER 147 165 165 SER SER B . n B 1 148 VAL 148 166 166 VAL VAL B . n B 1 149 ILE 149 167 167 ILE ILE B . n B 1 150 GLU 150 168 168 GLU GLU B . n B 1 151 MET 151 169 169 MET MET B . n B 1 152 ARG 152 170 170 ARG ARG B . n B 1 153 ARG 153 171 171 ARG ARG B . n B 1 154 ASN 154 172 172 ASN ASN B . n B 1 155 ASP 155 173 173 ASP ASP B . n B 1 156 GLY 156 174 174 GLY GLY B . n B 1 157 LYS 157 175 175 LYS LYS B . n B 1 158 ILE 158 176 176 ILE ILE B . n B 1 159 PRO 159 177 177 PRO PRO B . n B 1 160 SER 160 178 178 SER SER B . n B 1 161 PRO 161 179 179 PRO PRO B . n B 1 162 LEU 162 180 180 LEU LEU B . n B 1 163 SER 163 181 181 SER SER B . n B 1 164 ALA 164 182 182 ALA ALA B . n B 1 165 ASP 165 183 183 ASP ASP B . n B 1 166 SER 166 184 184 SER SER B . n B 1 167 LEU 167 185 185 LEU LEU B . n B 1 168 PRO 168 186 186 PRO PRO B . n B 1 169 GLU 169 187 187 GLU GLU B . n B 1 170 THR 170 188 188 THR THR B . n B 1 171 ALA 171 189 189 ALA ALA B . n B 1 172 ILE 172 190 190 ILE ILE B . n B 1 173 MET 173 191 191 MET MET B . n B 1 174 LEU 174 192 192 LEU LEU B . n B 1 175 ALA 175 193 193 ALA ALA B . n B 1 176 ASP 176 194 194 ASP ASP B . n B 1 177 ALA 177 195 195 ALA ALA B . n B 1 178 SER 178 196 196 SER SER B . n B 1 179 LEU 179 197 197 LEU LEU B . n B 1 180 ALA 180 198 198 ALA ALA B . n B 1 181 VAL 181 199 199 VAL VAL B . n B 1 182 LEU 182 200 200 LEU LEU B . n B 1 183 GLY 183 201 201 GLY GLY B . n B 1 184 ALA 184 202 202 ALA ALA B . n B 1 185 PRO 185 203 203 PRO PRO B . n B 1 186 LEU 186 204 204 LEU LEU B . n B 1 187 PRO 187 205 205 PRO PRO B . n B 1 188 ALA 188 206 206 ALA ALA B . n B 1 189 ASP 189 207 207 ASP ASP B . n B 1 190 ARG 190 208 208 ARG ARG B . n B 1 191 VAL 191 209 209 VAL VAL B . n B 1 192 GLU 192 210 210 GLU GLU B . n B 1 193 LYS 193 211 211 LYS LYS B . n B 1 194 THR 194 212 212 THR THR B . n B 1 195 LEU 195 213 213 LEU LEU B . n B 1 196 GLU 196 214 214 GLU GLU B . n B 1 197 LEU 197 215 215 LEU LEU B . n B 1 198 ILE 198 216 216 ILE ILE B . n B 1 199 LYS 199 217 217 LYS LYS B . n B 1 200 GLN 200 218 218 GLN GLN B . n B 1 201 ALA 201 219 219 ALA ALA B . n B 1 202 ASP 202 220 220 ASP ASP B . n C 2 1 DG 1 1 1 DG DG C . n C 2 2 DT 2 2 2 DT DT C . n C 2 3 DC 3 3 3 DC DC C . n C 2 4 DT 4 4 4 DT DT C . n C 2 5 DA 5 5 5 DA DA C . n C 2 6 DT 6 6 6 DT DT C . n C 2 7 DA 7 7 7 DA DA C . n C 2 8 DG 8 8 8 DG DG C . n C 2 9 DA 9 9 9 DA DA C . n C 2 10 DT 10 10 10 DT DT C . n C 2 11 DC 11 11 11 DC DC C . n C 2 12 DG 12 12 12 DG DG C . n C 2 13 DA 13 13 13 DA DA C . n C 2 14 DT 14 14 14 DT DT C . n C 2 15 DA 15 15 15 DA DA C . n C 2 16 DG 16 16 16 DG DG C . n C 2 17 DA 17 17 17 DA DA C . n C 2 18 DC 18 18 18 DC DC C . n D 3 1 DG 1 1 1 DG DG D . n D 3 2 DT 2 2 2 DT DT D . n D 3 3 DC 3 3 3 DC DC D . n D 3 4 DT 4 4 4 DT DT D . n D 3 5 DA 5 5 5 DA DA D . n D 3 6 DT 6 6 6 DT DT D . n D 3 7 DC 7 7 7 DC DC D . n D 3 8 DG 8 8 8 DG DG D . n D 3 9 DA 9 9 9 DA DA D . n D 3 10 DT 10 10 10 DT DT D . n D 3 11 DC 11 11 11 DC DC D . n D 3 12 DT 12 12 12 DT DT D . n D 3 13 DA 13 13 13 DA DA D . n D 3 14 DT 14 14 14 DT DT D . n D 3 15 DA 15 15 15 DA DA D . n D 3 16 DG 16 16 16 DG DG D . n D 3 17 DA 17 17 17 DA DA D . n D 3 18 DC 18 18 18 DC DC D . n # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.13_2998 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.entry_id 6GY3 _cell.length_a 63.320 _cell.length_b 76.150 _cell.length_c 117.400 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GY3 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6GY3 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.86 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 57 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M ammonium acetate, 0.1 M Tris-HCl, pH 8.5, 25% PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX-225' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2010-11-09 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91841 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.91841 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 14.1 _diffrn_source.pdbx_synchrotron_site BESSY # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 6GY3 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 33.289 _reflns.d_resolution_high 2.680 _reflns.number_obs 16335 _reflns.number_all ? _reflns.percent_possible_obs 98.8 _reflns.pdbx_Rmerge_I_obs 0.07200 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 21.4600 _reflns.B_iso_Wilson_estimate 53.68 _reflns.pdbx_redundancy 6.964 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.68 _reflns_shell.d_res_low 2.75 _reflns_shell.percent_possible_all 90.1 _reflns_shell.Rmerge_I_obs 0.61800 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.390 _reflns_shell.pdbx_redundancy 6.10 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 6GY3 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 16275 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.990 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.29 _refine.ls_d_res_high 2.68 _refine.ls_percent_reflns_obs 98.5 _refine.ls_R_factor_obs 0.210 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.208 _refine.ls_R_factor_R_free 0.251 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.990 _refine.ls_number_reflns_R_free 812 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 65.10 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 5MQQ _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.240 _refine.pdbx_overall_phase_error 28.070 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3140 _refine_hist.pdbx_number_atoms_nucleic_acid 732 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3872 _refine_hist.d_res_high 2.68 _refine_hist.d_res_low 33.29 # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 'X-RAY DIFFRACTION' 1 1 1 ? ? ? ? ? A 1230 POSITIONAL ? ? ? 'X-RAY DIFFRACTION' 2 1 2 ? ? ? ? ? B 1230 POSITIONAL ? ? ? 'X-RAY DIFFRACTION' 1 2 3 ? ? ? ? ? C 300 POSITIONAL ? ? ? 'X-RAY DIFFRACTION' 2 2 4 ? ? ? ? ? D 300 POSITIONAL ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.6802 2.8480 2448 0.2761 95.00 0.3431 . . 129 . . 'X-RAY DIFFRACTION' . 2.8480 3.0678 2545 0.2686 100.00 0.3015 . . 134 . . 'X-RAY DIFFRACTION' . 3.0678 3.3763 2545 0.2537 98.00 0.3007 . . 132 . . 'X-RAY DIFFRACTION' . 3.3763 3.8642 2569 0.2204 99.00 0.2912 . . 135 . . 'X-RAY DIFFRACTION' . 3.8642 4.8660 2615 0.1827 99.00 0.2387 . . 137 . . 'X-RAY DIFFRACTION' . 4.8660 33.2915 2741 0.1740 99.00 0.1912 . . 145 . . # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 ? 1 2 ? 1 1 ? 2 2 ? 2 # loop_ _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.selection_details _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.end_auth_comp_id 1 ? ? ? ? 1 ? ? ? ? ? ? ? ? ? 1 'CHAIN A' ? ? 2 ? ? ? ? 1 ? ? ? ? ? ? ? ? ? 1 'CHAIN B' ? ? 1 ? ? ? ? 1 ? ? ? ? ? ? ? ? ? 2 ;(CHAIN C AND (RESID 1 THROUGH 6 OR RESID 8 THROUGH 11 OR RESID 13 THROUGH 18)) ; ? ? 2 ? ? ? ? 1 ? ? ? ? ? ? ? ? ? 2 ;(CHAIN D AND (RESID 1 THROUGH 6 OR RESID 8 THROUGH 11 OR RESID 13 THROUGH 18)) ; ? ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? # _struct.entry_id 6GY3 _struct.title 'Crystal Structure of C. glutamicum AmtR bound to glnA operator DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6GY3 _struct_keywords.text 'transcription regulator, transcription, TetR family, nitrogen regulation' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP H7C699_CORGT H7C699 ? 1 ;NPREEILDASAELFTRQGFATTSTHQIADAVGIRQASLYYHFPSKTEIFLTLLKSTVEPSTVLAEDLSTLDAGPEMRLWA IVASEVRLLLSTKWNVGRLYQLPIVGSEEFAEYHSQREALTNVFRDLATEIVGDDPRAELPFHITMSVIEMRRNDGKIPS PLSADSLPETAIMLADASLAVLGAPLPADRVEKTLELIKQAD ; 19 2 PDB 6GY3 6GY3 ? 2 ? 1 3 PDB 6GY3 6GY3 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6GY3 A 1 ? 202 ? H7C699 19 ? 220 ? 19 220 2 1 6GY3 B 1 ? 202 ? H7C699 19 ? 220 ? 19 220 3 2 6GY3 C 1 ? 18 ? 6GY3 1 ? 18 ? 1 18 4 3 6GY3 D 1 ? 18 ? 6GY3 1 ? 18 ? 1 18 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5570 ? 1 MORE -61 ? 1 'SSA (A^2)' 22660 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 1 ? GLY A 18 ? ASN A 19 GLY A 36 1 ? 18 HELX_P HELX_P2 AA2 SER A 23 ? GLY A 32 ? SER A 41 GLY A 50 1 ? 10 HELX_P HELX_P3 AA3 ARG A 34 ? ALA A 36 ? ARG A 52 ALA A 54 5 ? 3 HELX_P HELX_P4 AA4 SER A 37 ? PHE A 42 ? SER A 55 PHE A 60 1 ? 6 HELX_P HELX_P5 AA5 SER A 44 ? LEU A 70 ? SER A 62 LEU A 88 1 ? 27 HELX_P HELX_P6 AA6 GLY A 73 ? LEU A 90 ? GLY A 91 LEU A 108 1 ? 18 HELX_P HELX_P7 AA7 ASN A 95 ? TYR A 100 ? ASN A 113 TYR A 118 5 ? 6 HELX_P HELX_P8 AA8 LEU A 102 ? SER A 107 ? LEU A 120 SER A 125 5 ? 6 HELX_P HELX_P9 AA9 PHE A 110 ? GLY A 133 ? PHE A 128 GLY A 151 1 ? 24 HELX_P HELX_P10 AB1 ASP A 135 ? ALA A 138 ? ASP A 153 ALA A 156 5 ? 4 HELX_P HELX_P11 AB2 GLU A 139 ? SER A 147 ? GLU A 157 SER A 165 1 ? 9 HELX_P HELX_P12 AB3 VAL A 148 ? MET A 151 ? VAL A 166 MET A 169 5 ? 4 HELX_P HELX_P13 AB4 PRO A 168 ? LEU A 182 ? PRO A 186 LEU A 200 1 ? 15 HELX_P HELX_P14 AB5 ASP A 189 ? ALA A 201 ? ASP A 207 ALA A 219 1 ? 13 HELX_P HELX_P15 AB6 PRO B 2 ? GLY B 18 ? PRO B 20 GLY B 36 1 ? 17 HELX_P HELX_P16 AB7 SER B 23 ? GLY B 32 ? SER B 41 GLY B 50 1 ? 10 HELX_P HELX_P17 AB8 ARG B 34 ? ALA B 36 ? ARG B 52 ALA B 54 5 ? 3 HELX_P HELX_P18 AB9 SER B 37 ? PHE B 42 ? SER B 55 PHE B 60 1 ? 6 HELX_P HELX_P19 AC1 SER B 44 ? LEU B 70 ? SER B 62 LEU B 88 1 ? 27 HELX_P HELX_P20 AC2 GLY B 73 ? LEU B 90 ? GLY B 91 LEU B 108 1 ? 18 HELX_P HELX_P21 AC3 ASN B 95 ? TYR B 100 ? ASN B 113 TYR B 118 5 ? 6 HELX_P HELX_P22 AC4 LEU B 102 ? SER B 107 ? LEU B 120 SER B 125 5 ? 6 HELX_P HELX_P23 AC5 PHE B 110 ? GLY B 133 ? PHE B 128 GLY B 151 1 ? 24 HELX_P HELX_P24 AC6 ASP B 135 ? ALA B 138 ? ASP B 153 ALA B 156 5 ? 4 HELX_P HELX_P25 AC7 GLU B 139 ? SER B 147 ? GLU B 157 SER B 165 1 ? 9 HELX_P HELX_P26 AC8 VAL B 148 ? MET B 151 ? VAL B 166 MET B 169 5 ? 4 HELX_P HELX_P27 AC9 PRO B 168 ? LEU B 182 ? PRO B 186 LEU B 200 1 ? 15 HELX_P HELX_P28 AD1 ASP B 189 ? ALA B 201 ? ASP B 207 ALA B 219 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 18 N3 ? ? C DG 1 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 18 O2 ? ? C DG 1 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 18 N4 ? ? C DG 1 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DT 2 N3 ? ? ? 1_555 D DA 17 N1 ? ? C DT 2 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DT 2 O4 ? ? ? 1_555 D DA 17 N6 ? ? C DT 2 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DC 3 N3 ? ? ? 1_555 D DG 16 N1 ? ? C DC 3 D DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DC 3 N4 ? ? ? 1_555 D DG 16 O6 ? ? C DC 3 D DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DC 3 O2 ? ? ? 1_555 D DG 16 N2 ? ? C DC 3 D DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 15 N1 ? ? C DT 4 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 15 N6 ? ? C DT 4 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 14 N3 ? ? C DA 5 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 14 O4 ? ? C DA 5 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 13 N1 ? ? C DT 6 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 13 N6 ? ? C DT 6 D DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DA 7 N1 ? ? ? 1_555 D DT 12 N3 ? ? C DA 7 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DA 7 N6 ? ? ? 1_555 D DT 12 O4 ? ? C DA 7 D DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DG 8 N1 ? ? ? 1_555 D DC 11 N3 ? ? C DG 8 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DG 8 N2 ? ? ? 1_555 D DC 11 O2 ? ? C DG 8 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DG 8 O6 ? ? ? 1_555 D DC 11 N4 ? ? C DG 8 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DA 9 N1 ? ? ? 1_555 D DT 10 N3 ? ? C DA 9 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DA 9 N6 ? ? ? 1_555 D DT 10 O4 ? ? C DA 9 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DT 10 N3 ? ? ? 1_555 D DA 9 N1 ? ? C DT 10 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DT 10 O4 ? ? ? 1_555 D DA 9 N6 ? ? C DT 10 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DC 11 N3 ? ? ? 1_555 D DG 8 N1 ? ? C DC 11 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DC 11 N4 ? ? ? 1_555 D DG 8 O6 ? ? C DC 11 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 11 O2 ? ? ? 1_555 D DG 8 N2 ? ? C DC 11 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 12 N1 ? ? ? 1_555 D DC 7 N3 ? ? C DG 12 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 12 N2 ? ? ? 1_555 D DC 7 O2 ? ? C DG 12 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 12 O6 ? ? ? 1_555 D DC 7 N4 ? ? C DG 12 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DA 13 N1 ? ? ? 1_555 D DT 6 N3 ? ? C DA 13 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DA 13 N6 ? ? ? 1_555 D DT 6 O4 ? ? C DA 13 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DT 14 N3 ? ? ? 1_555 D DA 5 N1 ? ? C DT 14 D DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DT 14 O4 ? ? ? 1_555 D DA 5 N6 ? ? C DT 14 D DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DA 15 N1 ? ? ? 1_555 D DT 4 N3 ? ? C DA 15 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DA 15 N6 ? ? ? 1_555 D DT 4 O4 ? ? C DA 15 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 16 N1 ? ? ? 1_555 D DC 3 N3 ? ? C DG 16 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DG 16 N2 ? ? ? 1_555 D DC 3 O2 ? ? C DG 16 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DG 16 O6 ? ? ? 1_555 D DC 3 N4 ? ? C DG 16 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DA 17 N1 ? ? ? 1_555 D DT 2 N3 ? ? C DA 17 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DA 17 N6 ? ? ? 1_555 D DT 2 O4 ? ? C DA 17 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DC 18 N3 ? ? ? 1_555 D DG 1 N1 ? ? C DC 18 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DC 18 N4 ? ? ? 1_555 D DG 1 O6 ? ? C DC 18 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DC 18 O2 ? ? ? 1_555 D DG 1 N2 ? ? C DC 18 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 51 ? ? -119.51 -168.55 2 1 PHE A 128 ? ? -75.37 40.04 3 1 ASN A 172 ? ? -147.23 45.98 4 1 PHE B 128 ? ? -72.79 40.45 5 1 ASN B 172 ? ? -147.63 46.27 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 13.7917 38.3889 21.1523 0.5828 0.3901 0.3214 0.0102 0.0434 -0.1245 0.2555 0.1628 0.9407 0.0523 -0.2941 -0.3568 0.1400 0.0658 0.0681 0.2357 0.2523 -0.0478 -0.4871 -0.3927 0.0620 'X-RAY DIFFRACTION' 2 ? refined 16.1978 36.9551 -8.0800 0.5865 0.4969 0.3939 0.0811 -0.0172 0.0952 0.0335 0.0665 0.0293 0.0513 -0.0111 0.0190 0.3953 0.4241 0.2505 -0.1734 0.1784 0.3582 -0.1004 0.2728 0.0005 'X-RAY DIFFRACTION' 3 ? refined 9.6849 20.1407 21.9917 0.4035 0.4519 0.3862 0.0518 0.0873 -0.0560 0.1001 0.1423 0.0483 0.0752 -0.0286 0.0206 0.1241 -0.1337 -0.0413 0.5713 -0.3036 0.5568 0.0788 0.2104 -0.0006 'X-RAY DIFFRACTION' 4 ? refined 13.1075 28.9971 27.1467 0.4313 0.4916 0.3622 0.0358 -0.0794 -0.0474 0.0251 0.0326 0.0203 0.0134 -0.0066 -0.0248 -0.2387 0.3099 0.2990 0.5788 -0.0003 -0.0498 0.3852 -0.2828 -0.0005 'X-RAY DIFFRACTION' 5 ? refined 22.9625 7.7513 25.9812 0.5804 0.5038 0.4983 0.1136 -0.1067 -0.0157 0.1172 0.0112 0.0303 0.0355 0.0679 0.0185 -0.0175 -0.3164 -0.0367 0.1198 -0.0518 -0.2266 0.2321 0.0769 0.0000 'X-RAY DIFFRACTION' 6 ? refined 17.7798 -4.1850 24.1274 0.9631 0.4926 0.4970 0.0697 0.1112 0.0684 0.1584 0.1023 0.0598 0.0870 0.0129 0.0482 -0.2150 -0.2592 -0.2850 0.3297 0.1166 0.1884 0.6581 0.1416 -0.0580 'X-RAY DIFFRACTION' 7 ? refined 24.6970 13.8594 13.9732 0.3835 0.5709 0.4601 -0.0302 -0.0305 0.0423 0.2138 0.0026 0.0017 0.0232 0.0182 0.0028 0.0626 0.2055 -0.2588 -0.0454 0.1361 -0.1054 -0.0302 0.3059 0.0021 'X-RAY DIFFRACTION' 8 ? refined 29.7259 -1.8526 18.7329 0.7232 0.6191 0.7499 0.1476 -0.1635 0.0456 0.0411 0.0150 0.0710 -0.0043 0.0164 -0.0220 -0.1096 0.1198 -0.1499 -0.0736 0.0542 -0.0627 0.1042 0.2600 0.0005 'X-RAY DIFFRACTION' 9 ? refined 22.3505 -6.3259 12.5593 0.5629 0.3031 0.5085 0.0295 0.1288 -0.0574 0.0443 0.1886 0.1198 0.0308 0.0559 0.1375 0.4902 -0.2442 0.1477 0.4379 0.0064 -0.0874 0.1885 -0.0076 0.0160 'X-RAY DIFFRACTION' 10 ? refined 9.4830 -5.3997 22.3712 0.6973 0.3003 0.5527 -0.1712 0.4050 0.0515 0.1620 0.0761 0.0766 0.1062 -0.0224 0.0115 -0.1759 -0.1630 -0.3832 0.0800 -0.0377 0.0116 0.3978 -0.0418 -0.5561 'X-RAY DIFFRACTION' 11 ? refined 19.9082 -20.4530 20.8193 1.2272 0.4815 0.7366 0.0664 0.3485 0.2866 0.0008 0.0002 -0.0001 -0.0000 0.0005 -0.0004 0.0209 -0.1070 -0.0140 0.2635 -0.0445 0.1536 -0.0306 -0.0697 -0.1768 'X-RAY DIFFRACTION' 12 ? refined 18.2164 -11.7239 33.3309 1.6609 0.7604 0.7817 0.0679 0.2864 0.2908 1.0283 0.1562 0.3249 0.0443 0.2796 0.2087 -0.0761 -0.2620 -0.5591 -0.1360 0.0721 0.0803 0.1485 0.4118 0.0969 'X-RAY DIFFRACTION' 13 ? refined 21.7960 21.9456 -6.0780 0.2383 0.3748 0.2652 0.0132 -0.0602 0.0149 0.0824 0.5996 0.2480 -0.1458 -0.1379 0.2678 0.0642 0.1502 0.2027 -0.2148 -0.2723 -0.1769 -0.2674 0.0373 -0.0145 'X-RAY DIFFRACTION' 14 ? refined 10.7123 5.7887 -7.0367 0.2215 0.4685 0.6397 -0.0384 -0.0594 -0.1849 0.1127 0.3675 0.3922 0.1991 -0.1480 -0.2339 -0.1531 0.5232 -0.3407 -0.2173 0.0375 0.0547 0.2729 -0.1896 -0.2992 'X-RAY DIFFRACTION' 15 ? refined 15.0485 -5.6072 -1.0423 0.2827 0.2785 0.5389 -0.1086 0.0712 -0.1771 0.7126 1.2815 1.4398 0.2058 0.4158 -1.0484 0.0137 0.2779 -0.1661 -0.3192 -0.2519 0.3402 0.6019 -0.0754 -1.2712 'X-RAY DIFFRACTION' 16 ? refined 17.7316 37.4666 -4.6294 0.4646 0.4868 0.4192 -0.0159 0.1375 0.1347 0.1350 0.1675 0.0863 -0.0233 0.0178 -0.1324 0.1137 -0.2049 -0.0157 -0.3425 0.2082 0.1486 -0.1443 0.1448 -0.0001 'X-RAY DIFFRACTION' 17 ? refined 15.4750 38.1804 24.8528 0.6961 0.5031 0.3398 -0.0430 0.0021 -0.0752 0.0312 0.0169 0.0159 0.0072 -0.0271 0.0125 0.1788 0.0377 0.2418 -0.0673 0.1657 -0.2558 -0.4854 -0.1210 0.0003 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;CHAIN 'D' AND (RESID 1 THROUGH 10 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;CHAIN 'D' AND (RESID 11 THROUGH 18 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 19 THROUGH 49 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 50 THROUGH 62 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 63 THROUGH 87 ) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 88 THROUGH 117 ) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 118 THROUGH 128 ) ; 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 129 THROUGH 150 ) ; 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 151 THROUGH 168 ) ; 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 169 THROUGH 199 ) ; 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 200 THROUGH 207 ) ; 'X-RAY DIFFRACTION' 12 12 ? ? ? ? ? ? ? ? ? ;CHAIN 'A' AND (RESID 208 THROUGH 220 ) ; 'X-RAY DIFFRACTION' 13 13 ? ? ? ? ? ? ? ? ? ;CHAIN 'B' AND (RESID 19 THROUGH 62 ) ; 'X-RAY DIFFRACTION' 14 14 ? ? ? ? ? ? ? ? ? ;CHAIN 'B' AND (RESID 63 THROUGH 87 ) ; 'X-RAY DIFFRACTION' 15 15 ? ? ? ? ? ? ? ? ? ;CHAIN 'B' AND (RESID 88 THROUGH 220 ) ; 'X-RAY DIFFRACTION' 16 16 ? ? ? ? ? ? ? ? ? ;CHAIN 'C' AND (RESID 1 THROUGH 10 ) ; 'X-RAY DIFFRACTION' 17 17 ? ? ? ? ? ? ? ? ? ;CHAIN 'C' AND (RESID 11 THROUGH 18 ) ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 ILE N N N N 287 ILE CA C N S 288 ILE C C N N 289 ILE O O N N 290 ILE CB C N S 291 ILE CG1 C N N 292 ILE CG2 C N N 293 ILE CD1 C N N 294 ILE OXT O N N 295 ILE H H N N 296 ILE H2 H N N 297 ILE HA H N N 298 ILE HB H N N 299 ILE HG12 H N N 300 ILE HG13 H N N 301 ILE HG21 H N N 302 ILE HG22 H N N 303 ILE HG23 H N N 304 ILE HD11 H N N 305 ILE HD12 H N N 306 ILE HD13 H N N 307 ILE HXT H N N 308 LEU N N N N 309 LEU CA C N S 310 LEU C C N N 311 LEU O O N N 312 LEU CB C N N 313 LEU CG C N N 314 LEU CD1 C N N 315 LEU CD2 C N N 316 LEU OXT O N N 317 LEU H H N N 318 LEU H2 H N N 319 LEU HA H N N 320 LEU HB2 H N N 321 LEU HB3 H N N 322 LEU HG H N N 323 LEU HD11 H N N 324 LEU HD12 H N N 325 LEU HD13 H N N 326 LEU HD21 H N N 327 LEU HD22 H N N 328 LEU HD23 H N N 329 LEU HXT H N N 330 LYS N N N N 331 LYS CA C N S 332 LYS C C N N 333 LYS O O N N 334 LYS CB C N N 335 LYS CG C N N 336 LYS CD C N N 337 LYS CE C N N 338 LYS NZ N N N 339 LYS OXT O N N 340 LYS H H N N 341 LYS H2 H N N 342 LYS HA H N N 343 LYS HB2 H N N 344 LYS HB3 H N N 345 LYS HG2 H N N 346 LYS HG3 H N N 347 LYS HD2 H N N 348 LYS HD3 H N N 349 LYS HE2 H N N 350 LYS HE3 H N N 351 LYS HZ1 H N N 352 LYS HZ2 H N N 353 LYS HZ3 H N N 354 LYS HXT H N N 355 MET N N N N 356 MET CA C N S 357 MET C C N N 358 MET O O N N 359 MET CB C N N 360 MET CG C N N 361 MET SD S N N 362 MET CE C N N 363 MET OXT O N N 364 MET H H N N 365 MET H2 H N N 366 MET HA H N N 367 MET HB2 H N N 368 MET HB3 H N N 369 MET HG2 H N N 370 MET HG3 H N N 371 MET HE1 H N N 372 MET HE2 H N N 373 MET HE3 H N N 374 MET HXT H N N 375 PHE N N N N 376 PHE CA C N S 377 PHE C C N N 378 PHE O O N N 379 PHE CB C N N 380 PHE CG C Y N 381 PHE CD1 C Y N 382 PHE CD2 C Y N 383 PHE CE1 C Y N 384 PHE CE2 C Y N 385 PHE CZ C Y N 386 PHE OXT O N N 387 PHE H H N N 388 PHE H2 H N N 389 PHE HA H N N 390 PHE HB2 H N N 391 PHE HB3 H N N 392 PHE HD1 H N N 393 PHE HD2 H N N 394 PHE HE1 H N N 395 PHE HE2 H N N 396 PHE HZ H N N 397 PHE HXT H N N 398 PRO N N N N 399 PRO CA C N S 400 PRO C C N N 401 PRO O O N N 402 PRO CB C N N 403 PRO CG C N N 404 PRO CD C N N 405 PRO OXT O N N 406 PRO H H N N 407 PRO HA H N N 408 PRO HB2 H N N 409 PRO HB3 H N N 410 PRO HG2 H N N 411 PRO HG3 H N N 412 PRO HD2 H N N 413 PRO HD3 H N N 414 PRO HXT H N N 415 SER N N N N 416 SER CA C N S 417 SER C C N N 418 SER O O N N 419 SER CB C N N 420 SER OG O N N 421 SER OXT O N N 422 SER H H N N 423 SER H2 H N N 424 SER HA H N N 425 SER HB2 H N N 426 SER HB3 H N N 427 SER HG H N N 428 SER HXT H N N 429 THR N N N N 430 THR CA C N S 431 THR C C N N 432 THR O O N N 433 THR CB C N R 434 THR OG1 O N N 435 THR CG2 C N N 436 THR OXT O N N 437 THR H H N N 438 THR H2 H N N 439 THR HA H N N 440 THR HB H N N 441 THR HG1 H N N 442 THR HG21 H N N 443 THR HG22 H N N 444 THR HG23 H N N 445 THR HXT H N N 446 TRP N N N N 447 TRP CA C N S 448 TRP C C N N 449 TRP O O N N 450 TRP CB C N N 451 TRP CG C Y N 452 TRP CD1 C Y N 453 TRP CD2 C Y N 454 TRP NE1 N Y N 455 TRP CE2 C Y N 456 TRP CE3 C Y N 457 TRP CZ2 C Y N 458 TRP CZ3 C Y N 459 TRP CH2 C Y N 460 TRP OXT O N N 461 TRP H H N N 462 TRP H2 H N N 463 TRP HA H N N 464 TRP HB2 H N N 465 TRP HB3 H N N 466 TRP HD1 H N N 467 TRP HE1 H N N 468 TRP HE3 H N N 469 TRP HZ2 H N N 470 TRP HZ3 H N N 471 TRP HH2 H N N 472 TRP HXT H N N 473 TYR N N N N 474 TYR CA C N S 475 TYR C C N N 476 TYR O O N N 477 TYR CB C N N 478 TYR CG C Y N 479 TYR CD1 C Y N 480 TYR CD2 C Y N 481 TYR CE1 C Y N 482 TYR CE2 C Y N 483 TYR CZ C Y N 484 TYR OH O N N 485 TYR OXT O N N 486 TYR H H N N 487 TYR H2 H N N 488 TYR HA H N N 489 TYR HB2 H N N 490 TYR HB3 H N N 491 TYR HD1 H N N 492 TYR HD2 H N N 493 TYR HE1 H N N 494 TYR HE2 H N N 495 TYR HH H N N 496 TYR HXT H N N 497 VAL N N N N 498 VAL CA C N S 499 VAL C C N N 500 VAL O O N N 501 VAL CB C N N 502 VAL CG1 C N N 503 VAL CG2 C N N 504 VAL OXT O N N 505 VAL H H N N 506 VAL H2 H N N 507 VAL HA H N N 508 VAL HB H N N 509 VAL HG11 H N N 510 VAL HG12 H N N 511 VAL HG13 H N N 512 VAL HG21 H N N 513 VAL HG22 H N N 514 VAL HG23 H N N 515 VAL HXT H N N 516 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 ILE N CA sing N N 286 ILE N H sing N N 287 ILE N H2 sing N N 288 ILE CA C sing N N 289 ILE CA CB sing N N 290 ILE CA HA sing N N 291 ILE C O doub N N 292 ILE C OXT sing N N 293 ILE CB CG1 sing N N 294 ILE CB CG2 sing N N 295 ILE CB HB sing N N 296 ILE CG1 CD1 sing N N 297 ILE CG1 HG12 sing N N 298 ILE CG1 HG13 sing N N 299 ILE CG2 HG21 sing N N 300 ILE CG2 HG22 sing N N 301 ILE CG2 HG23 sing N N 302 ILE CD1 HD11 sing N N 303 ILE CD1 HD12 sing N N 304 ILE CD1 HD13 sing N N 305 ILE OXT HXT sing N N 306 LEU N CA sing N N 307 LEU N H sing N N 308 LEU N H2 sing N N 309 LEU CA C sing N N 310 LEU CA CB sing N N 311 LEU CA HA sing N N 312 LEU C O doub N N 313 LEU C OXT sing N N 314 LEU CB CG sing N N 315 LEU CB HB2 sing N N 316 LEU CB HB3 sing N N 317 LEU CG CD1 sing N N 318 LEU CG CD2 sing N N 319 LEU CG HG sing N N 320 LEU CD1 HD11 sing N N 321 LEU CD1 HD12 sing N N 322 LEU CD1 HD13 sing N N 323 LEU CD2 HD21 sing N N 324 LEU CD2 HD22 sing N N 325 LEU CD2 HD23 sing N N 326 LEU OXT HXT sing N N 327 LYS N CA sing N N 328 LYS N H sing N N 329 LYS N H2 sing N N 330 LYS CA C sing N N 331 LYS CA CB sing N N 332 LYS CA HA sing N N 333 LYS C O doub N N 334 LYS C OXT sing N N 335 LYS CB CG sing N N 336 LYS CB HB2 sing N N 337 LYS CB HB3 sing N N 338 LYS CG CD sing N N 339 LYS CG HG2 sing N N 340 LYS CG HG3 sing N N 341 LYS CD CE sing N N 342 LYS CD HD2 sing N N 343 LYS CD HD3 sing N N 344 LYS CE NZ sing N N 345 LYS CE HE2 sing N N 346 LYS CE HE3 sing N N 347 LYS NZ HZ1 sing N N 348 LYS NZ HZ2 sing N N 349 LYS NZ HZ3 sing N N 350 LYS OXT HXT sing N N 351 MET N CA sing N N 352 MET N H sing N N 353 MET N H2 sing N N 354 MET CA C sing N N 355 MET CA CB sing N N 356 MET CA HA sing N N 357 MET C O doub N N 358 MET C OXT sing N N 359 MET CB CG sing N N 360 MET CB HB2 sing N N 361 MET CB HB3 sing N N 362 MET CG SD sing N N 363 MET CG HG2 sing N N 364 MET CG HG3 sing N N 365 MET SD CE sing N N 366 MET CE HE1 sing N N 367 MET CE HE2 sing N N 368 MET CE HE3 sing N N 369 MET OXT HXT sing N N 370 PHE N CA sing N N 371 PHE N H sing N N 372 PHE N H2 sing N N 373 PHE CA C sing N N 374 PHE CA CB sing N N 375 PHE CA HA sing N N 376 PHE C O doub N N 377 PHE C OXT sing N N 378 PHE CB CG sing N N 379 PHE CB HB2 sing N N 380 PHE CB HB3 sing N N 381 PHE CG CD1 doub Y N 382 PHE CG CD2 sing Y N 383 PHE CD1 CE1 sing Y N 384 PHE CD1 HD1 sing N N 385 PHE CD2 CE2 doub Y N 386 PHE CD2 HD2 sing N N 387 PHE CE1 CZ doub Y N 388 PHE CE1 HE1 sing N N 389 PHE CE2 CZ sing Y N 390 PHE CE2 HE2 sing N N 391 PHE CZ HZ sing N N 392 PHE OXT HXT sing N N 393 PRO N CA sing N N 394 PRO N CD sing N N 395 PRO N H sing N N 396 PRO CA C sing N N 397 PRO CA CB sing N N 398 PRO CA HA sing N N 399 PRO C O doub N N 400 PRO C OXT sing N N 401 PRO CB CG sing N N 402 PRO CB HB2 sing N N 403 PRO CB HB3 sing N N 404 PRO CG CD sing N N 405 PRO CG HG2 sing N N 406 PRO CG HG3 sing N N 407 PRO CD HD2 sing N N 408 PRO CD HD3 sing N N 409 PRO OXT HXT sing N N 410 SER N CA sing N N 411 SER N H sing N N 412 SER N H2 sing N N 413 SER CA C sing N N 414 SER CA CB sing N N 415 SER CA HA sing N N 416 SER C O doub N N 417 SER C OXT sing N N 418 SER CB OG sing N N 419 SER CB HB2 sing N N 420 SER CB HB3 sing N N 421 SER OG HG sing N N 422 SER OXT HXT sing N N 423 THR N CA sing N N 424 THR N H sing N N 425 THR N H2 sing N N 426 THR CA C sing N N 427 THR CA CB sing N N 428 THR CA HA sing N N 429 THR C O doub N N 430 THR C OXT sing N N 431 THR CB OG1 sing N N 432 THR CB CG2 sing N N 433 THR CB HB sing N N 434 THR OG1 HG1 sing N N 435 THR CG2 HG21 sing N N 436 THR CG2 HG22 sing N N 437 THR CG2 HG23 sing N N 438 THR OXT HXT sing N N 439 TRP N CA sing N N 440 TRP N H sing N N 441 TRP N H2 sing N N 442 TRP CA C sing N N 443 TRP CA CB sing N N 444 TRP CA HA sing N N 445 TRP C O doub N N 446 TRP C OXT sing N N 447 TRP CB CG sing N N 448 TRP CB HB2 sing N N 449 TRP CB HB3 sing N N 450 TRP CG CD1 doub Y N 451 TRP CG CD2 sing Y N 452 TRP CD1 NE1 sing Y N 453 TRP CD1 HD1 sing N N 454 TRP CD2 CE2 doub Y N 455 TRP CD2 CE3 sing Y N 456 TRP NE1 CE2 sing Y N 457 TRP NE1 HE1 sing N N 458 TRP CE2 CZ2 sing Y N 459 TRP CE3 CZ3 doub Y N 460 TRP CE3 HE3 sing N N 461 TRP CZ2 CH2 doub Y N 462 TRP CZ2 HZ2 sing N N 463 TRP CZ3 CH2 sing Y N 464 TRP CZ3 HZ3 sing N N 465 TRP CH2 HH2 sing N N 466 TRP OXT HXT sing N N 467 TYR N CA sing N N 468 TYR N H sing N N 469 TYR N H2 sing N N 470 TYR CA C sing N N 471 TYR CA CB sing N N 472 TYR CA HA sing N N 473 TYR C O doub N N 474 TYR C OXT sing N N 475 TYR CB CG sing N N 476 TYR CB HB2 sing N N 477 TYR CB HB3 sing N N 478 TYR CG CD1 doub Y N 479 TYR CG CD2 sing Y N 480 TYR CD1 CE1 sing Y N 481 TYR CD1 HD1 sing N N 482 TYR CD2 CE2 doub Y N 483 TYR CD2 HD2 sing N N 484 TYR CE1 CZ doub Y N 485 TYR CE1 HE1 sing N N 486 TYR CE2 CZ sing Y N 487 TYR CE2 HE2 sing N N 488 TYR CZ OH sing N N 489 TYR OH HH sing N N 490 TYR OXT HXT sing N N 491 VAL N CA sing N N 492 VAL N H sing N N 493 VAL N H2 sing N N 494 VAL CA C sing N N 495 VAL CA CB sing N N 496 VAL CA HA sing N N 497 VAL C O doub N N 498 VAL C OXT sing N N 499 VAL CB CG1 sing N N 500 VAL CB CG2 sing N N 501 VAL CB HB sing N N 502 VAL CG1 HG11 sing N N 503 VAL CG1 HG12 sing N N 504 VAL CG1 HG13 sing N N 505 VAL CG2 HG21 sing N N 506 VAL CG2 HG22 sing N N 507 VAL CG2 HG23 sing N N 508 VAL OXT HXT sing N N 509 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6GY3 'double helix' 6GY3 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 1 1_555 D DC 18 1_555 -0.765 -0.140 0.227 3.670 -4.134 2.906 1 C_DG1:DC18_D C 1 ? D 18 ? 19 1 1 C DT 2 1_555 D DA 17 1_555 0.057 0.020 -0.094 3.951 -10.966 -5.394 2 C_DT2:DA17_D C 2 ? D 17 ? 20 1 1 C DC 3 1_555 D DG 16 1_555 -0.039 -0.246 0.256 -10.894 -15.374 4.958 3 C_DC3:DG16_D C 3 ? D 16 ? 19 1 1 C DT 4 1_555 D DA 15 1_555 -0.337 -0.166 0.066 -3.734 -8.433 -2.279 4 C_DT4:DA15_D C 4 ? D 15 ? 20 1 1 C DA 5 1_555 D DT 14 1_555 0.543 -0.106 0.201 -1.000 -8.144 0.585 5 C_DA5:DT14_D C 5 ? D 14 ? 20 1 1 C DT 6 1_555 D DA 13 1_555 0.209 -0.124 0.050 8.361 -5.252 1.338 6 C_DT6:DA13_D C 6 ? D 13 ? 20 1 1 C DA 7 1_555 D DT 12 1_555 0.731 -0.387 0.464 -2.191 -20.631 -8.012 7 C_DA7:DT12_D C 7 ? D 12 ? 20 1 1 C DG 8 1_555 D DC 11 1_555 -0.192 -0.296 -0.058 -5.427 -13.205 1.948 8 C_DG8:DC11_D C 8 ? D 11 ? 19 1 1 C DA 9 1_555 D DT 10 1_555 0.740 0.036 -0.181 -4.990 -6.204 -0.054 9 C_DA9:DT10_D C 9 ? D 10 ? 20 1 1 C DT 10 1_555 D DA 9 1_555 -0.176 -0.160 -0.194 4.547 -17.077 -1.422 10 C_DT10:DA9_D C 10 ? D 9 ? 20 1 1 C DC 11 1_555 D DG 8 1_555 -0.141 -0.278 -0.019 -1.931 -17.130 1.877 11 C_DC11:DG8_D C 11 ? D 8 ? 19 1 1 C DG 12 1_555 D DC 7 1_555 0.875 -0.259 0.403 -0.446 -14.547 -2.953 12 C_DG12:DC7_D C 12 ? D 7 ? 19 1 1 C DA 13 1_555 D DT 6 1_555 0.544 -0.023 -0.093 -6.972 -7.363 1.075 13 C_DA13:DT6_D C 13 ? D 6 ? 20 1 1 C DT 14 1_555 D DA 5 1_555 -0.590 -0.217 -0.037 0.679 -6.836 -3.464 14 C_DT14:DA5_D C 14 ? D 5 ? 20 1 1 C DA 15 1_555 D DT 4 1_555 0.347 -0.071 0.023 1.994 -7.834 -1.899 15 C_DA15:DT4_D C 15 ? D 4 ? 20 1 1 C DG 16 1_555 D DC 3 1_555 -0.139 -0.211 0.487 15.805 -15.754 4.707 16 C_DG16:DC3_D C 16 ? D 3 ? 19 1 1 C DA 17 1_555 D DT 2 1_555 0.051 -0.004 -0.188 -0.728 -11.789 -7.154 17 C_DA17:DT2_D C 17 ? D 2 ? 20 1 1 C DC 18 1_555 D DG 1 1_555 0.224 -0.175 0.152 2.615 -1.768 0.145 18 C_DC18:DG1_D C 18 ? D 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 1 1_555 D DC 18 1_555 C DT 2 1_555 D DA 17 1_555 -0.470 -0.687 3.239 1.546 4.410 33.508 -1.873 1.050 3.102 7.602 -2.666 33.823 1 CC_DG1DT2:DA17DC18_DD C 1 ? D 18 ? C 2 ? D 17 ? 1 C DT 2 1_555 D DA 17 1_555 C DC 3 1_555 D DG 16 1_555 1.052 -0.375 3.557 1.202 -3.551 39.737 -0.100 -1.390 3.605 -5.210 -1.764 39.907 2 CC_DT2DC3:DG16DA17_DD C 2 ? D 17 ? C 3 ? D 16 ? 1 C DC 3 1_555 D DG 16 1_555 C DT 4 1_555 D DA 15 1_555 -0.834 -0.123 3.158 1.623 10.602 29.951 -2.081 1.808 2.900 19.735 -3.021 31.772 3 CC_DC3DT4:DA15DG16_DD C 3 ? D 16 ? C 4 ? D 15 ? 1 C DT 4 1_555 D DA 15 1_555 C DA 5 1_555 D DT 14 1_555 0.487 -0.379 3.303 -0.745 1.344 37.636 -0.762 -0.851 3.279 2.083 1.154 37.666 4 CC_DT4DA5:DT14DA15_DD C 4 ? D 15 ? C 5 ? D 14 ? 1 C DA 5 1_555 D DT 14 1_555 C DT 6 1_555 D DA 13 1_555 0.546 -0.862 3.068 0.620 -2.842 28.429 -1.132 -0.971 3.148 -5.768 -1.258 28.575 5 CC_DA5DT6:DA13DT14_DD C 5 ? D 14 ? C 6 ? D 13 ? 1 C DT 6 1_555 D DA 13 1_555 C DA 7 1_555 D DT 12 1_555 -1.256 -0.107 3.560 -5.929 -3.535 38.769 0.310 1.078 3.700 -5.275 8.847 39.356 6 CC_DT6DA7:DT12DA13_DD C 6 ? D 13 ? C 7 ? D 12 ? 1 C DA 7 1_555 D DT 12 1_555 C DG 8 1_555 D DC 11 1_555 0.781 -0.249 3.491 3.771 6.948 32.197 -1.693 -0.688 3.431 12.299 -6.675 33.129 7 CC_DA7DG8:DC11DT12_DD C 7 ? D 12 ? C 8 ? D 11 ? 1 C DG 8 1_555 D DC 11 1_555 C DA 9 1_555 D DT 10 1_555 -0.122 -0.381 3.303 -1.146 3.269 33.653 -1.185 0.023 3.255 5.628 1.973 33.825 8 CC_DG8DA9:DT10DC11_DD C 8 ? D 11 ? C 9 ? D 10 ? 1 C DA 9 1_555 D DT 10 1_555 C DT 10 1_555 D DA 9 1_555 -0.329 -0.677 3.097 1.561 -0.440 28.051 -1.297 1.025 3.084 -0.908 -3.218 28.097 9 CC_DA9DT10:DA9DT10_DD C 9 ? D 10 ? C 10 ? D 9 ? 1 C DT 10 1_555 D DA 9 1_555 C DC 11 1_555 D DG 8 1_555 0.439 -0.242 3.472 0.532 0.004 33.642 -0.418 -0.667 3.478 0.007 -0.919 33.646 10 CC_DT10DC11:DG8DA9_DD C 10 ? D 9 ? C 11 ? D 8 ? 1 C DC 11 1_555 D DG 8 1_555 C DG 12 1_555 D DC 7 1_555 -0.530 0.558 3.478 -3.323 4.509 40.447 0.265 0.365 3.548 6.484 4.778 40.817 11 CC_DC11DG12:DC7DG8_DD C 11 ? D 8 ? C 12 ? D 7 ? 1 C DG 12 1_555 D DC 7 1_555 C DA 13 1_555 D DT 6 1_555 0.873 -0.387 3.533 5.637 0.527 32.238 -0.786 -0.477 3.623 0.939 -10.054 32.719 12 CC_DG12DA13:DT6DC7_DD C 12 ? D 7 ? C 13 ? D 6 ? 1 C DA 13 1_555 D DT 6 1_555 C DT 14 1_555 D DA 5 1_555 -0.720 -1.026 3.193 -0.875 -0.727 25.020 -2.154 1.405 3.244 -1.677 2.018 25.045 13 CC_DA13DT14:DA5DT6_DD C 13 ? D 6 ? C 14 ? D 5 ? 1 C DT 14 1_555 D DA 5 1_555 C DA 15 1_555 D DT 4 1_555 -0.229 -0.404 3.381 0.162 4.162 37.312 -1.186 0.377 3.318 6.481 -0.252 37.535 14 CC_DT14DA15:DT4DA5_DD C 14 ? D 5 ? C 15 ? D 4 ? 1 C DA 15 1_555 D DT 4 1_555 C DG 16 1_555 D DC 3 1_555 0.757 -0.165 2.932 -3.118 8.823 28.581 -1.908 -2.023 2.668 17.296 6.113 30.044 15 CC_DA15DG16:DC3DT4_DD C 15 ? D 4 ? C 16 ? D 3 ? 1 C DG 16 1_555 D DC 3 1_555 C DA 17 1_555 D DT 2 1_555 -1.147 -0.371 3.654 1.154 -2.391 41.151 -0.239 1.768 3.637 -3.398 -1.640 41.232 16 CC_DG16DA17:DT2DC3_DD C 16 ? D 3 ? C 17 ? D 2 ? 1 C DA 17 1_555 D DT 2 1_555 C DC 18 1_555 D DG 1 1_555 0.511 -0.706 3.171 -1.511 4.772 30.429 -2.211 -1.240 3.000 9.015 2.855 30.829 17 CC_DA17DC18:DG1DT2_DD C 17 ? D 2 ? C 18 ? D 1 ? # _pdbx_audit_support.funding_organization 'German Research Foundation' _pdbx_audit_support.country Germany _pdbx_audit_support.grant_number SPP1395 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5MQQ _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6GY3 _atom_sites.fract_transf_matrix[1][1] 0.015793 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013132 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008518 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_