HEADER TRANSCRIPTION 29-JUN-18 6GYG TITLE X-RAY STRUCTURE OF THE APO FORM OF THE ESTABLISHEMENT GENE REGULATOR TITLE 2 REG576 OF THE G+ PLASMID P576 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION REGULATOR REG576; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ALTITUDINIS; SOURCE 3 ORGANISM_TAXID: 293387; SOURCE 4 GENE: ABW03_19300; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PLASMID ESTABLISHMENT DNA BINDIG PROTEIN GENE REPRESSOR GRAM-POSITIVE KEYWDS 2 BACTERIA BACTERIAL CONJUGATION, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR I.CRESPO,W.J.J.MEIJER,D.R.BOER REVDAT 5 16-OCT-19 6GYG 1 AUTHOR REVDAT 4 10-JUL-19 6GYG 1 AUTHOR REVDAT 3 26-DEC-18 6GYG 1 JRNL REVDAT 2 28-NOV-18 6GYG 1 JRNL REVDAT 1 17-OCT-18 6GYG 0 JRNL AUTH J.VAL-CALVO,J.R.LUQUE-ORTEGA,I.CRESPO,A.MIGUEL-ARRIBAS, JRNL AUTH 2 D.ABIA,D.L.SANCHEZ-HEVIA,E.SERRANO,C.GAGO-CORDOBA,S.ARES, JRNL AUTH 3 C.ALFONSO,F.ROJO,L.J.WU,D.R.BOER,W.J.J.MEIJER JRNL TITL NOVEL REGULATORY MECHANISM OF ESTABLISHMENT GENES OF JRNL TITL 2 CONJUGATIVE PLASMIDS. JRNL REF NUCLEIC ACIDS RES. V. 46 11910 2018 JRNL REFN ESSN 1362-4962 JRNL PMID 30380104 JRNL DOI 10.1093/NAR/GKY996 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0222 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 84.1 REMARK 3 NUMBER OF REFLECTIONS : 8373 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 453 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.98 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 108 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 14.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.3310 REMARK 3 BIN FREE R VALUE SET COUNT : 3 REMARK 3 BIN FREE R VALUE : 0.3970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1050 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 33 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.89 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.32000 REMARK 3 B22 (A**2) : 0.32000 REMARK 3 B33 (A**2) : -0.63000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.229 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.196 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.153 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.884 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1065 ; 0.015 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 1047 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1418 ; 1.741 ; 1.666 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2459 ; 1.058 ; 1.639 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 118 ; 5.741 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 62 ;35.454 ;23.710 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 241 ;17.600 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;14.215 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 134 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1121 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 191 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 478 ; 3.025 ; 3.984 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 477 ; 3.028 ; 3.972 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 594 ; 4.266 ; 5.933 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 595 ; 4.263 ; 5.947 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 587 ; 4.420 ; 4.769 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 585 ; 4.404 ; 4.750 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 824 ; 7.022 ; 6.856 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1192 ; 8.627 ;45.094 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1191 ; 8.612 ;45.090 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 18 REMARK 3 ORIGIN FOR THE GROUP (A): 0.4921 31.7324 2.1545 REMARK 3 T TENSOR REMARK 3 T11: 0.0871 T22: 0.0136 REMARK 3 T33: 0.1189 T12: -0.0200 REMARK 3 T13: 0.0145 T23: -0.0175 REMARK 3 L TENSOR REMARK 3 L11: 9.8380 L22: 0.4640 REMARK 3 L33: 0.9000 L12: 0.6247 REMARK 3 L13: -1.7969 L23: -0.6002 REMARK 3 S TENSOR REMARK 3 S11: 0.0329 S12: 0.2025 S13: 0.3325 REMARK 3 S21: 0.0975 S22: 0.0065 S23: -0.0224 REMARK 3 S31: -0.1442 S32: -0.0214 S33: -0.0394 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 19 A 33 REMARK 3 ORIGIN FOR THE GROUP (A): -2.1789 23.9337 13.3807 REMARK 3 T TENSOR REMARK 3 T11: 0.0785 T22: 0.2855 REMARK 3 T33: 0.1104 T12: -0.0984 REMARK 3 T13: 0.0425 T23: -0.1389 REMARK 3 L TENSOR REMARK 3 L11: 0.8094 L22: 2.8726 REMARK 3 L33: 1.6776 L12: -1.0370 REMARK 3 L13: -0.7236 L23: 2.1799 REMARK 3 S TENSOR REMARK 3 S11: 0.0034 S12: -0.3501 S13: 0.1617 REMARK 3 S21: 0.0138 S22: 0.1750 S23: -0.1216 REMARK 3 S31: 0.0023 S32: 0.1893 S33: -0.1784 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 34 A 49 REMARK 3 ORIGIN FOR THE GROUP (A): -4.0666 13.9021 2.3969 REMARK 3 T TENSOR REMARK 3 T11: 0.0696 T22: 0.1094 REMARK 3 T33: 0.0884 T12: 0.0072 REMARK 3 T13: 0.0082 T23: -0.0317 REMARK 3 L TENSOR REMARK 3 L11: 2.1906 L22: 3.8773 REMARK 3 L33: 2.9164 L12: 1.7498 REMARK 3 L13: 1.2838 L23: 3.3389 REMARK 3 S TENSOR REMARK 3 S11: -0.1821 S12: -0.2362 S13: 0.0707 REMARK 3 S21: 0.0825 S22: 0.1007 S23: 0.1254 REMARK 3 S31: 0.1105 S32: 0.1365 S33: 0.0814 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 50 A 65 REMARK 3 ORIGIN FOR THE GROUP (A): 5.0715 10.9732 -8.0262 REMARK 3 T TENSOR REMARK 3 T11: 0.0799 T22: 0.1105 REMARK 3 T33: 0.0919 T12: 0.0055 REMARK 3 T13: 0.0297 T23: 0.0118 REMARK 3 L TENSOR REMARK 3 L11: 7.0941 L22: 2.2805 REMARK 3 L33: 1.6893 L12: 3.9316 REMARK 3 L13: 0.0855 L23: 0.1829 REMARK 3 S TENSOR REMARK 3 S11: 0.0785 S12: 0.1575 S13: -0.1672 REMARK 3 S21: 0.0866 S22: -0.0009 S23: -0.1153 REMARK 3 S31: 0.2859 S32: 0.1245 S33: -0.0776 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 6 B 12 REMARK 3 ORIGIN FOR THE GROUP (A): 2.1822 33.0912 4.4880 REMARK 3 T TENSOR REMARK 3 T11: 0.0478 T22: 0.0558 REMARK 3 T33: 0.1369 T12: -0.0005 REMARK 3 T13: 0.0328 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 7.4686 L22: 9.2793 REMARK 3 L33: 1.3879 L12: -5.3362 REMARK 3 L13: 2.2991 L23: -1.0981 REMARK 3 S TENSOR REMARK 3 S11: -0.3394 S12: 0.1354 S13: 0.1150 REMARK 3 S21: 0.6507 S22: 0.0191 S23: 0.2292 REMARK 3 S31: -0.0348 S32: 0.1000 S33: 0.3203 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 13 B 27 REMARK 3 ORIGIN FOR THE GROUP (A): 3.8457 18.8912 -3.0303 REMARK 3 T TENSOR REMARK 3 T11: 0.1100 T22: 0.0394 REMARK 3 T33: 0.1052 T12: -0.0013 REMARK 3 T13: 0.0401 T23: -0.0202 REMARK 3 L TENSOR REMARK 3 L11: 2.5605 L22: 1.5151 REMARK 3 L33: 6.0786 L12: 1.2274 REMARK 3 L13: 2.7017 L23: 1.0729 REMARK 3 S TENSOR REMARK 3 S11: 0.0002 S12: 0.0173 S13: 0.0156 REMARK 3 S21: -0.2537 S22: 0.0583 S23: -0.1834 REMARK 3 S31: -0.2516 S32: -0.0151 S33: -0.0585 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 28 B 46 REMARK 3 ORIGIN FOR THE GROUP (A): -7.4449 21.9177 0.9665 REMARK 3 T TENSOR REMARK 3 T11: 0.0670 T22: 0.0831 REMARK 3 T33: 0.1008 T12: -0.0209 REMARK 3 T13: 0.0139 T23: -0.0379 REMARK 3 L TENSOR REMARK 3 L11: 3.6864 L22: 3.5865 REMARK 3 L33: 3.0584 L12: 2.6837 REMARK 3 L13: -3.1750 L23: -2.0659 REMARK 3 S TENSOR REMARK 3 S11: -0.1555 S12: 0.1749 S13: 0.0891 REMARK 3 S21: -0.2124 S22: 0.1174 S23: -0.0438 REMARK 3 S31: 0.1515 S32: -0.2882 S33: 0.0381 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 47 B 66 REMARK 3 ORIGIN FOR THE GROUP (A): -13.3931 27.2311 16.4155 REMARK 3 T TENSOR REMARK 3 T11: 0.0431 T22: 0.0650 REMARK 3 T33: 0.0648 T12: 0.0036 REMARK 3 T13: 0.0206 T23: -0.0258 REMARK 3 L TENSOR REMARK 3 L11: 0.8410 L22: 8.0716 REMARK 3 L33: 3.0333 L12: 0.4298 REMARK 3 L13: -1.1651 L23: 0.4506 REMARK 3 S TENSOR REMARK 3 S11: 0.1016 S12: 0.0760 S13: 0.1003 REMARK 3 S21: 0.1013 S22: 0.0980 S23: 0.1424 REMARK 3 S31: -0.1964 S32: -0.2271 S33: -0.1996 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6GYG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1200010735. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9789 REMARK 200 MONOCHROMATOR : CHANNEL CUT SI111 REMARK 200 OPTICS : KB MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AUTOPROC SNAPSHOT_20170508 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8828 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.979 REMARK 200 RESOLUTION RANGE LOW (A) : 42.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.6 REMARK 200 DATA REDUNDANCY : 11.60 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 41.9 REMARK 200 DATA REDUNDANCY IN SHELL : 12.30 REMARK 200 R MERGE FOR SHELL (I) : 1.95900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: ARCIMBOLDO REMARK 200 STARTING MODEL: FRAGMENTS REMARK 200 REMARK 200 REMARK: NEEDLES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CONCENTRATED TO 25 MG/ML REMARK 280 IN [20 MM TRIS (PH8.0), 250 MM NACL]. CRYSTALS OF REG576 WERE REMARK 280 OBTAINED IN 130 MM POTASSIUM BROMIDE, 25% PEG 2000 REMARK 280 MONOMETHYLETHER BY THE SITTING-DROP VAPOR-DIFFUSION METHOD AT 18 REMARK 280 DEG. C, IN DROPS OF 1 UL + 1 UL (PROTEIN:RESERVOIR). NEEDLE- REMARK 280 SHAPED CRYSTALS APPEARED IN LESS T HAN A WEEK. CRYO-COOLING IN REMARK 280 LIQUID NITROGEN WAS CARRIED OUT USING A CRYO-PROTECTING SOLUTION REMARK 280 CONTAINING RESERVOIR SOLUTION SUPPLEMENTED WITH 5% GLYCEROL, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.58300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 22.13900 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 22.13900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 105.87450 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 22.13900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 22.13900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.29150 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 22.13900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 22.13900 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 105.87450 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 22.13900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 22.13900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 35.29150 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 70.58300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LYS A 3 REMARK 465 ASN A 4 REMARK 465 ASP A 5 REMARK 465 PHE A 6 REMARK 465 GLU A 66 REMARK 465 GLU A 67 REMARK 465 GLU A 68 REMARK 465 HIS A 69 REMARK 465 GLU A 70 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 LYS B 3 REMARK 465 ASN B 4 REMARK 465 ASP B 5 REMARK 465 GLU B 67 REMARK 465 GLU B 68 REMARK 465 HIS B 69 REMARK 465 GLU B 70 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS B 30 OE1 GLU B 66 7465 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 52 0.23 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF1 6GYG A 1 66 UNP A0A0J1KER7_9BACI DBREF2 6GYG A A0A0J1KER7 4 69 DBREF1 6GYG B 1 66 UNP A0A0J1KER7_9BACI DBREF2 6GYG B A0A0J1KER7 4 69 SEQADV 6GYG ILE A 38 UNP A0A0J1KER LEU 41 CONFLICT SEQADV 6GYG GLU A 60 UNP A0A0J1KER ASP 63 CONFLICT SEQADV 6GYG GLU A 67 UNP A0A0J1KER EXPRESSION TAG SEQADV 6GYG GLU A 68 UNP A0A0J1KER EXPRESSION TAG SEQADV 6GYG HIS A 69 UNP A0A0J1KER EXPRESSION TAG SEQADV 6GYG GLU A 70 UNP A0A0J1KER EXPRESSION TAG SEQADV 6GYG ILE B 38 UNP A0A0J1KER LEU 41 CONFLICT SEQADV 6GYG GLU B 60 UNP A0A0J1KER ASP 63 CONFLICT SEQADV 6GYG GLU B 67 UNP A0A0J1KER EXPRESSION TAG SEQADV 6GYG GLU B 68 UNP A0A0J1KER EXPRESSION TAG SEQADV 6GYG HIS B 69 UNP A0A0J1KER EXPRESSION TAG SEQADV 6GYG GLU B 70 UNP A0A0J1KER EXPRESSION TAG SEQRES 1 A 70 MET LYS LYS ASN ASP PHE ARG LYS ASN ILE LYS LEU THR SEQRES 2 A 70 GLU PRO ILE PHE ASN LYS LEU LYS ALA LEU MET LYS VAL SEQRES 3 A 70 LYS ASP VAL LYS GLN TYR GLU LEU ILE GLU ILE ILE LEU SEQRES 4 A 70 ASP PHE TYR VAL THR ASN LYS LEU SER GLU LYS GLU ARG SEQRES 5 A 70 GLU PHE PHE ASN TYR GLN LEU GLU GLU LEU ARG LYS GLU SEQRES 6 A 70 GLU GLU GLU HIS GLU SEQRES 1 B 70 MET LYS LYS ASN ASP PHE ARG LYS ASN ILE LYS LEU THR SEQRES 2 B 70 GLU PRO ILE PHE ASN LYS LEU LYS ALA LEU MET LYS VAL SEQRES 3 B 70 LYS ASP VAL LYS GLN TYR GLU LEU ILE GLU ILE ILE LEU SEQRES 4 B 70 ASP PHE TYR VAL THR ASN LYS LEU SER GLU LYS GLU ARG SEQRES 5 B 70 GLU PHE PHE ASN TYR GLN LEU GLU GLU LEU ARG LYS GLU SEQRES 6 B 70 GLU GLU GLU HIS GLU FORMUL 3 HOH *33(H2 O) HELIX 1 AA1 THR A 13 LYS A 27 1 15 HELIX 2 AA2 LYS A 30 LYS A 46 1 17 HELIX 3 AA3 SER A 48 LYS A 64 1 17 HELIX 4 AA4 THR B 13 LYS B 27 1 15 HELIX 5 AA5 LYS B 30 LEU B 47 1 18 HELIX 6 AA6 SER B 48 GLU B 65 1 18 SHEET 1 AA1 2 ILE A 10 LEU A 12 0 SHEET 2 AA1 2 LYS B 8 ILE B 10 -1 O ILE B 10 N ILE A 10 CRYST1 44.278 44.278 141.166 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022585 0.000000 0.000000 0.00000 SCALE2 0.000000 0.022585 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007084 0.00000