data_6GYV # _entry.id 6GYV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.384 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6GYV pdb_00006gyv 10.2210/pdb6gyv/pdb WWPDB D_1200009556 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-08-22 2 'Structure model' 1 1 2022-12-14 3 'Structure model' 1 2 2024-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' 'Experimental preparation' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' exptl 3 2 'Structure model' pdbx_struct_conn_angle 4 2 'Structure model' struct_conn 5 3 'Structure model' chem_comp_atom 6 3 'Structure model' chem_comp_bond 7 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.value' 6 2 'Structure model' '_struct_conn.pdbx_dist_value' 7 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2018-08-22 _pdbx_database_PDB_obs_spr.pdb_id 6GYV _pdbx_database_PDB_obs_spr.replace_pdb_id 4P95 _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6GYV _pdbx_database_status.recvd_initial_deposition_date 2018-07-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Same ribozyme WT' 4P8Z unspecified PDB 'LC ribozyme Iridium hexammine derivative' 4P9R unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Masquida, B.' 1 ? 'Meyer, M.' 2 ? 'Nielsen, H.' 3 ? 'Olieric, V.' 4 ? 'Roblin, P.' 5 ? 'Johansen, S.D.' 6 ? 'Westhof, E.' 7 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Proc. Natl. Acad. Sci. U.S.A.' _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 111 _citation.language ? _citation.page_first 7659 _citation.page_last 7664 _citation.title 'Speciation of a group I intron into a lariat capping ribozyme.' _citation.year 2014 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1322248111 _citation.pdbx_database_id_PubMed 24821772 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Meyer, M.' 1 ? primary 'Nielsen, H.' 2 ? primary 'Olieric, V.' 3 ? primary 'Roblin, P.' 4 ? primary 'Johansen, S.D.' 5 ? primary 'Westhof, E.' 6 ? primary 'Masquida, B.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Lariat-capping ribozyme' 61891.707 1 ? ? ? ? 2 non-polymer syn '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' 195.237 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 5 water nat water 18.015 99 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;CAUCCGGUAUCCCAAGACAAUCUUCGGGUUGGGUUGGGAAGUAUCAUGGCUAAUCACCAUGAUGCAAUCGGGUUGAACAC UUAAUUGGGUUAAAACGGUGGGGGACGAUCCCGUAACAUCCGUCCUAACGGCGACAGACUGCACGGCCCUGCCUCUUAGG UGUGUCCAAUGAACAGUCGUUCCGAAAGGAAG ; _entity_poly.pdbx_seq_one_letter_code_can ;CAUCCGGUAUCCCAAGACAAUCUUCGGGUUGGGUUGGGAAGUAUCAUGGCUAAUCACCAUGAUGCAAUCGGGUUGAACAC UUAAUUGGGUUAAAACGGUGGGGGACGAUCCCGUAACAUCCGUCCUAACGGCGACAGACUGCACGGCCCUGCCUCUUAGG UGUGUCCAAUGAACAGUCGUUCCGAAAGGAAG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' MES 3 'MAGNESIUM ION' MG 4 'SODIUM ION' NA 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 A n 1 3 U n 1 4 C n 1 5 C n 1 6 G n 1 7 G n 1 8 U n 1 9 A n 1 10 U n 1 11 C n 1 12 C n 1 13 C n 1 14 A n 1 15 A n 1 16 G n 1 17 A n 1 18 C n 1 19 A n 1 20 A n 1 21 U n 1 22 C n 1 23 U n 1 24 U n 1 25 C n 1 26 G n 1 27 G n 1 28 G n 1 29 U n 1 30 U n 1 31 G n 1 32 G n 1 33 G n 1 34 U n 1 35 U n 1 36 G n 1 37 G n 1 38 G n 1 39 A n 1 40 A n 1 41 G n 1 42 U n 1 43 A n 1 44 U n 1 45 C n 1 46 A n 1 47 U n 1 48 G n 1 49 G n 1 50 C n 1 51 U n 1 52 A n 1 53 A n 1 54 U n 1 55 C n 1 56 A n 1 57 C n 1 58 C n 1 59 A n 1 60 U n 1 61 G n 1 62 A n 1 63 U n 1 64 G n 1 65 C n 1 66 A n 1 67 A n 1 68 U n 1 69 C n 1 70 G n 1 71 G n 1 72 G n 1 73 U n 1 74 U n 1 75 G n 1 76 A n 1 77 A n 1 78 C n 1 79 A n 1 80 C n 1 81 U n 1 82 U n 1 83 A n 1 84 A n 1 85 U n 1 86 U n 1 87 G n 1 88 G n 1 89 G n 1 90 U n 1 91 U n 1 92 A n 1 93 A n 1 94 A n 1 95 A n 1 96 C n 1 97 G n 1 98 G n 1 99 U n 1 100 G n 1 101 G n 1 102 G n 1 103 G n 1 104 G n 1 105 A n 1 106 C n 1 107 G n 1 108 A n 1 109 U n 1 110 C n 1 111 C n 1 112 C n 1 113 G n 1 114 U n 1 115 A n 1 116 A n 1 117 C n 1 118 A n 1 119 U n 1 120 C n 1 121 C n 1 122 G n 1 123 U n 1 124 C n 1 125 C n 1 126 U n 1 127 A n 1 128 A n 1 129 C n 1 130 G n 1 131 G n 1 132 C n 1 133 G n 1 134 A n 1 135 C n 1 136 A n 1 137 G n 1 138 A n 1 139 C n 1 140 U n 1 141 G n 1 142 C n 1 143 A n 1 144 C n 1 145 G n 1 146 G n 1 147 C n 1 148 C n 1 149 C n 1 150 U n 1 151 G n 1 152 C n 1 153 C n 1 154 U n 1 155 C n 1 156 U n 1 157 U n 1 158 A n 1 159 G n 1 160 G n 1 161 U n 1 162 G n 1 163 U n 1 164 G n 1 165 U n 1 166 C n 1 167 C n 1 168 A n 1 169 A n 1 170 U n 1 171 G n 1 172 A n 1 173 A n 1 174 C n 1 175 A n 1 176 G n 1 177 U n 1 178 C n 1 179 G n 1 180 U n 1 181 U n 1 182 C n 1 183 C n 1 184 G n 1 185 A n 1 186 A n 1 187 A n 1 188 G n 1 189 G n 1 190 A n 1 191 A n 1 192 G n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 192 _pdbx_entity_src_syn.organism_scientific 'Didymium iridis' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 5793 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MES non-polymer . '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' ? 'C6 H13 N O4 S' 195.237 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 1 1 C Cr A . n A 1 2 A 2 2 2 A Ar A . n A 1 3 U 3 3 3 U Ur A . n A 1 4 C 4 4 4 C Cr A . n A 1 5 C 5 5 5 C Cr A . n A 1 6 G 6 6 6 G Gr A . n A 1 7 G 7 7 7 G Gr A . n A 1 8 U 8 8 8 U Ur A . n A 1 9 A 9 9 9 A Ar A . n A 1 10 U 10 10 10 U Ur A . n A 1 11 C 11 11 11 C Cr A . n A 1 12 C 12 12 12 C Cr A . n A 1 13 C 13 13 13 C Cr A . n A 1 14 A 14 14 14 A Ar A . n A 1 15 A 15 15 15 A Ar A . n A 1 16 G 16 16 16 G Gr A . n A 1 17 A 17 17 17 A Ar A . n A 1 18 C 18 18 18 C Cr A . n A 1 19 A 19 19 19 A Ar A . n A 1 20 A 20 20 20 A Ar A . n A 1 21 U 21 21 21 U Ur A . n A 1 22 C 22 22 22 C Cr A . n A 1 23 U 23 23 23 U U A . n A 1 24 U 24 24 24 U Ur A . n A 1 25 C 25 25 25 C Cr A . n A 1 26 G 26 26 26 G Gr A . n A 1 27 G 27 27 27 G Gr A . n A 1 28 G 28 28 28 G Gr A . n A 1 29 U 29 29 29 U Ur A . n A 1 30 U 30 30 30 U Ur A . n A 1 31 G 31 31 31 G Gr A . n A 1 32 G 32 32 32 G Gr A . n A 1 33 G 33 33 33 G Gr A . n A 1 34 U 34 34 34 U Ur A . n A 1 35 U 35 35 35 U Ur A . n A 1 36 G 36 36 36 G Gr A . n A 1 37 G 37 37 37 G Gr A . n A 1 38 G 38 38 38 G Gr A . n A 1 39 A 39 39 39 A Ar A . n A 1 40 A 40 40 40 A Ar A . n A 1 41 G 41 41 41 G Gr A . n A 1 42 U 42 42 42 U Ur A . n A 1 43 A 43 43 43 A Ar A . n A 1 44 U 44 44 44 U Ur A . n A 1 45 C 45 45 45 C Cr A . n A 1 46 A 46 46 46 A Ar A . n A 1 47 U 47 47 47 U Ur A . n A 1 48 G 48 48 48 G Gr A . n A 1 49 G 49 49 49 G Gr A . n A 1 50 C 50 50 50 C Cr A . n A 1 51 U 51 51 51 U Ur A . n A 1 52 A 52 52 52 A Ar A . n A 1 53 A 53 53 53 A Ar A . n A 1 54 U 54 54 54 U Ur A . n A 1 55 C 55 55 55 C Cr A . n A 1 56 A 56 56 56 A Ar A . n A 1 57 C 57 57 57 C Cr A . n A 1 58 C 58 58 58 C Cr A . n A 1 59 A 59 59 59 A Ar A . n A 1 60 U 60 60 60 U Ur A . n A 1 61 G 61 61 61 G Gr A . n A 1 62 A 62 62 62 A Ar A . n A 1 63 U 63 63 63 U Ur A . n A 1 64 G 64 64 64 G Gr A . n A 1 65 C 65 65 65 C Cr A . n A 1 66 A 66 66 66 A Ar A . n A 1 67 A 67 67 67 A Ar A . n A 1 68 U 68 68 68 U Ur A . n A 1 69 C 69 69 69 C Cr A . n A 1 70 G 70 70 70 G Gr A . n A 1 71 G 71 71 71 G Gr A . n A 1 72 G 72 72 72 G Gr A . n A 1 73 U 73 73 73 U Ur A . n A 1 74 U 74 74 74 U Ur A . n A 1 75 G 75 75 75 G Gr A . n A 1 76 A 76 76 76 A Ar A . n A 1 77 A 77 77 77 A Ar A . n A 1 78 C 78 78 78 C Cr A . n A 1 79 A 79 79 79 A Ar A . n A 1 80 C 80 80 80 C Cr A . n A 1 81 U 81 81 81 U Ur A . n A 1 82 U 82 82 82 U Ur A . n A 1 83 A 83 83 83 A Ar A . n A 1 84 A 84 84 84 A Ar A . n A 1 85 U 85 85 85 U Ur A . n A 1 86 U 86 86 86 U Ur A . n A 1 87 G 87 87 87 G Gr A . n A 1 88 G 88 88 88 G Gr A . n A 1 89 G 89 89 89 G Gr A . n A 1 90 U 90 90 90 U Ur A . n A 1 91 U 91 91 91 U Ur A . n A 1 92 A 92 92 92 A Ar A . n A 1 93 A 93 93 93 A Ar A . n A 1 94 A 94 94 94 A Ar A . n A 1 95 A 95 95 95 A Ar A . n A 1 96 C 96 96 96 C Cr A . n A 1 97 G 97 97 97 G Gr A . n A 1 98 G 98 98 98 G Gr A . n A 1 99 U 99 99 99 U Ur A . n A 1 100 G 100 100 100 G Gr A . n A 1 101 G 101 101 101 G Gr A . n A 1 102 G 102 102 102 G Gr A . n A 1 103 G 103 103 103 G Gr A . n A 1 104 G 104 104 104 G Gr A . n A 1 105 A 105 105 105 A Ar A . n A 1 106 C 106 106 106 C Cr A . n A 1 107 G 107 107 107 G Gr A . n A 1 108 A 108 108 108 A Ar A . n A 1 109 U 109 109 109 U Ur A . n A 1 110 C 110 110 110 C Cr A . n A 1 111 C 111 111 111 C Cr A . n A 1 112 C 112 112 112 C Cr A . n A 1 113 G 113 113 113 G Gr A . n A 1 114 U 114 114 114 U Ur A . n A 1 115 A 115 115 115 A Ar A . n A 1 116 A 116 116 116 A Ar A . n A 1 117 C 117 117 117 C Cr A . n A 1 118 A 118 118 118 A Ar A . n A 1 119 U 119 119 119 U Ur A . n A 1 120 C 120 120 120 C Cr A . n A 1 121 C 121 121 121 C Cr A . n A 1 122 G 122 122 122 G Gr A . n A 1 123 U 123 123 123 U Ur A . n A 1 124 C 124 124 124 C Cr A . n A 1 125 C 125 125 125 C Cr A . n A 1 126 U 126 126 126 U Ur A . n A 1 127 A 127 127 127 A Ar A . n A 1 128 A 128 128 128 A Ar A . n A 1 129 C 129 129 129 C Cr A . n A 1 130 G 130 130 130 G Gr A . n A 1 131 G 131 131 131 G Gr A . n A 1 132 C 132 132 132 C Cr A . n A 1 133 G 133 133 133 G Gr A . n A 1 134 A 134 134 134 A Ar A . n A 1 135 C 135 135 135 C Cr A . n A 1 136 A 136 136 136 A Ar A . n A 1 137 G 137 137 137 G Gr A . n A 1 138 A 138 138 138 A Ar A . n A 1 139 C 139 139 139 C Cr A . n A 1 140 U 140 140 140 U Ur A . n A 1 141 G 141 141 141 G Gr A . n A 1 142 C 142 142 142 C Cr A . n A 1 143 A 143 143 143 A Ar A . n A 1 144 C 144 144 144 C Cr A . n A 1 145 G 145 145 145 G Gr A . n A 1 146 G 146 146 146 G Gr A . n A 1 147 C 147 147 147 C Cr A . n A 1 148 C 148 148 148 C Cr A . n A 1 149 C 149 149 149 C Cr A . n A 1 150 U 150 150 150 U Ur A . n A 1 151 G 151 151 151 G Gr A . n A 1 152 C 152 152 152 C Cr A . n A 1 153 C 153 153 153 C Cr A . n A 1 154 U 154 154 154 U Ur A . n A 1 155 C 155 155 155 C Cr A . n A 1 156 U 156 155 ? ? ? A A n A 1 157 U 157 155 ? ? ? A B n A 1 158 A 158 156 156 A Ar A . n A 1 159 G 159 157 157 G Gr A . n A 1 160 G 160 158 158 G Gr A . n A 1 161 U 161 159 159 U Ur A . n A 1 162 G 162 160 160 G Gr A . n A 1 163 U 163 161 161 U Ur A . n A 1 164 G 164 162 162 G Gr A . n A 1 165 U 165 163 163 U Ur A . n A 1 166 C 166 164 164 C Cr A . n A 1 167 C 167 165 165 C Cr A . n A 1 168 A 168 166 166 A Ar A . n A 1 169 A 169 167 167 A Ar A . n A 1 170 U 170 168 168 U Ur A . n A 1 171 G 171 169 169 G Gr A . n A 1 172 A 172 170 170 A Ar A . n A 1 173 A 173 171 171 A Ar A . n A 1 174 C 174 172 172 C Cr A . n A 1 175 A 175 173 173 A Ar A . n A 1 176 G 176 174 174 G Gr A . n A 1 177 U 177 175 175 U Ur A . n A 1 178 C 178 176 176 C Cr A . n A 1 179 G 179 177 177 G Gr A . n A 1 180 U 180 178 178 U Ur A . n A 1 181 U 181 179 179 U Ur A . n A 1 182 C 182 180 180 C Cr A . n A 1 183 C 183 181 181 C Cr A . n A 1 184 G 184 182 182 G Gr A . n A 1 185 A 185 183 183 A Ar A . n A 1 186 A 186 184 184 A Ar A . n A 1 187 A 187 185 185 A Ar A . n A 1 188 G 188 186 186 G Gr A . n A 1 189 G 189 187 187 G Gr A . n A 1 190 A 190 188 188 A Ar A . n A 1 191 A 191 189 189 A Ar A . n A 1 192 G 192 190 190 G Gr A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MES 1 201 201 MES MES A . C 3 MG 1 202 301 MG MO6 A . D 3 MG 1 203 302 MG MO6 A . E 4 NA 1 204 3 NA NA A . F 5 HOH 1 301 406 HOH HOH A . F 5 HOH 2 302 420 HOH HOH A . F 5 HOH 3 303 466 HOH HOH A . F 5 HOH 4 304 447 HOH HOH A . F 5 HOH 5 305 484 HOH HOH A . F 5 HOH 6 306 302 HOH MO6 A . F 5 HOH 7 307 456 HOH HOH A . F 5 HOH 8 308 475 HOH HOH A . F 5 HOH 9 309 417 HOH HOH A . F 5 HOH 10 310 403 HOH HOH A . F 5 HOH 11 311 471 HOH HOH A . F 5 HOH 12 312 419 HOH HOH A . F 5 HOH 13 313 423 HOH HOH A . F 5 HOH 14 314 488 HOH HOH A . F 5 HOH 15 315 302 HOH MO6 A . F 5 HOH 16 316 479 HOH HOH A . F 5 HOH 17 317 433 HOH HOH A . F 5 HOH 18 318 467 HOH HOH A . F 5 HOH 19 319 416 HOH HOH A . F 5 HOH 20 320 421 HOH HOH A . F 5 HOH 21 321 487 HOH HOH A . F 5 HOH 22 322 436 HOH HOH A . F 5 HOH 23 323 424 HOH HOH A . F 5 HOH 24 324 427 HOH HOH A . F 5 HOH 25 325 414 HOH HOH A . F 5 HOH 26 326 428 HOH HOH A . F 5 HOH 27 327 446 HOH HOH A . F 5 HOH 28 328 464 HOH HOH A . F 5 HOH 29 329 301 HOH MO6 A . F 5 HOH 30 330 302 HOH MO6 A . F 5 HOH 31 331 481 HOH HOH A . F 5 HOH 32 332 302 HOH MO6 A . F 5 HOH 33 333 455 HOH HOH A . F 5 HOH 34 334 465 HOH HOH A . F 5 HOH 35 335 445 HOH HOH A . F 5 HOH 36 336 449 HOH HOH A . F 5 HOH 37 337 454 HOH HOH A . F 5 HOH 38 338 418 HOH HOH A . F 5 HOH 39 339 452 HOH HOH A . F 5 HOH 40 340 437 HOH HOH A . F 5 HOH 41 341 401 HOH HOH A . F 5 HOH 42 342 472 HOH HOH A . F 5 HOH 43 343 458 HOH HOH A . F 5 HOH 44 344 463 HOH HOH A . F 5 HOH 45 345 469 HOH HOH A . F 5 HOH 46 346 431 HOH HOH A . F 5 HOH 47 347 435 HOH HOH A . F 5 HOH 48 348 451 HOH HOH A . F 5 HOH 49 349 485 HOH HOH A . F 5 HOH 50 350 430 HOH HOH A . F 5 HOH 51 351 408 HOH HOH A . F 5 HOH 52 352 426 HOH HOH A . F 5 HOH 53 353 402 HOH HOH A . F 5 HOH 54 354 478 HOH HOH A . F 5 HOH 55 355 440 HOH HOH A . F 5 HOH 56 356 302 HOH MO6 A . F 5 HOH 57 357 470 HOH HOH A . F 5 HOH 58 358 407 HOH HOH A . F 5 HOH 59 359 460 HOH HOH A . F 5 HOH 60 360 473 HOH HOH A . F 5 HOH 61 361 409 HOH HOH A . F 5 HOH 62 362 457 HOH HOH A . F 5 HOH 63 363 301 HOH MO6 A . F 5 HOH 64 364 448 HOH HOH A . F 5 HOH 65 365 474 HOH HOH A . F 5 HOH 66 366 301 HOH MO6 A . F 5 HOH 67 367 480 HOH HOH A . F 5 HOH 68 368 443 HOH HOH A . F 5 HOH 69 369 444 HOH HOH A . F 5 HOH 70 370 301 HOH MO6 A . F 5 HOH 71 371 486 HOH HOH A . F 5 HOH 72 372 461 HOH HOH A . F 5 HOH 73 373 301 HOH MO6 A . F 5 HOH 74 374 459 HOH HOH A . F 5 HOH 75 375 439 HOH HOH A . F 5 HOH 76 376 405 HOH HOH A . F 5 HOH 77 377 482 HOH HOH A . F 5 HOH 78 378 425 HOH HOH A . F 5 HOH 79 379 476 HOH HOH A . F 5 HOH 80 380 468 HOH HOH A . F 5 HOH 81 381 434 HOH HOH A . F 5 HOH 82 382 422 HOH HOH A . F 5 HOH 83 383 429 HOH HOH A . F 5 HOH 84 384 412 HOH HOH A . F 5 HOH 85 385 415 HOH HOH A . F 5 HOH 86 386 462 HOH HOH A . F 5 HOH 87 387 477 HOH HOH A . F 5 HOH 88 388 453 HOH HOH A . F 5 HOH 89 389 483 HOH HOH A . F 5 HOH 90 390 441 HOH HOH A . F 5 HOH 91 391 438 HOH HOH A . F 5 HOH 92 392 410 HOH HOH A . F 5 HOH 93 393 450 HOH HOH A . F 5 HOH 94 394 411 HOH HOH A . F 5 HOH 95 395 442 HOH HOH A . F 5 HOH 96 396 432 HOH HOH A . F 5 HOH 97 397 404 HOH HOH A . F 5 HOH 98 398 413 HOH HOH A . F 5 HOH 99 399 302 HOH MO6 A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.11rc1_2513 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELX ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6GYV _cell.details ? _cell.formula_units_Z ? _cell.length_a 57.630 _cell.length_a_esd ? _cell.length_b 85.710 _cell.length_b_esd ? _cell.length_c 108.530 _cell.length_c_esd ? _cell.volume 536080.386 _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GYV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6GYV _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 43.76 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 Sodium chloride, 0.1 M BIS-TRIS pH 6.5, 25% w/v PEG 3,350 or (ii) 0.2 Sodium chloride, 0.1 M HEPES pH 7.5, 25% w/v PEG 3,350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 2M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-03-29 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.6 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X06DA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.6 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X06DA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate 46.1964978861 _reflns.entry_id 6GYV _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.50 _reflns.d_resolution_low 47.83 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 34663 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 3.16 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.50003617357 _reflns_shell.d_res_low 2.589 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 45.2999933522 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6GYV _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.50003617357 _refine.ls_d_res_low 47.8244954657 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 34663 _refine.ls_number_reflns_R_free 1968 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.5032434088 _refine.ls_percent_reflns_R_free 5.67752358423 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.200698514255 _refine.ls_R_factor_R_free 0.244903584028 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.198171132345 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.59236930785 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4p9r _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.2237571904 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.399076274601 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 4054 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 88 _refine_hist.number_atoms_total 4168 _refine_hist.d_res_high 2.50003617357 _refine_hist.d_res_low 47.8244954657 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.00164361938429 ? 4605 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.520596296905 ? 7182 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0228738097266 ? 959 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.00243759276119 ? 192 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 13.582135344 ? 2309 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.5 2.5626 . . 128 2289 94.4140625 . . . 0.350806393662 . 0.311099050098 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5626 2.6318 . . 145 2277 94.7574334898 . . . 0.367649210004 . 0.307638998113 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6318 2.7093 . . 173 2277 95.0349107836 . . . 0.342129417338 . 0.298787528295 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7093 2.7967 . . 150 2292 95.5772994129 . . . 0.431677083867 . 0.290454108339 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7967 2.8967 . . 147 2315 95.6859696852 . . . 0.3130194578 . 0.300524249842 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8967 3.0126 . . 141 2315 95.6386292835 . . . 0.363046007342 . 0.280097342137 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0126 3.1497 . . 110 2355 96.4397496088 . . . 0.293370584916 . 0.223675318032 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1497 3.3157 . . 126 2355 96.5369649805 . . . 0.284159826551 . 0.201139348305 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.3157 3.5234 . . 158 2337 96.9308469308 . . . 0.238238908996 . 0.195739364707 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5234 3.7953 . . 163 2308 97.2451790634 . . . 0.201859844562 . 0.170977651414 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.7953 4.1771 . . 116 2399 97.3297213622 . . . 0.201888158228 . 0.155762195573 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.1771 4.781 . . 142 2381 98.2476635514 . . . 0.185447671543 . 0.156555364304 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.781 6.0217 . . 134 2401 98.4083850932 . . . 0.19050064058 . 0.154899546269 . . . . . . . . . . 'X-RAY DIFFRACTION' 6.0217 47.8332 . . 135 2394 98.8276670574 . . . 0.192355036789 . 0.171578201825 . . . . . . . . . . # _struct.entry_id 6GYV _struct.title 'Lariat-capping ribozyme (circular permutation form)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6GYV _struct_keywords.text 'Lariat capping ribozyme, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6GYV _struct_ref.pdbx_db_accession 6GYV _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6GYV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 192 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6GYV _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 190 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 190 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 690 ? 1 MORE -26 ? 1 'SSA (A^2)' 28990 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support SAXS _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 133 OP1 ? ? ? 1_555 C MG . MG ? ? A G 133 A MG 202 1_555 ? ? ? ? ? ? ? 2.078 ? ? metalc2 metalc ? ? B MES . O1 ? ? ? 1_555 E NA . NA ? ? A MES 201 A NA 204 1_555 ? ? ? ? ? ? ? 2.799 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 202 A HOH 329 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 202 A HOH 363 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 202 A HOH 366 1_555 ? ? ? ? ? ? ? 2.182 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 202 A HOH 370 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc7 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 202 A HOH 373 1_555 ? ? ? ? ? ? ? 2.182 ? ? metalc8 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 203 A HOH 306 1_555 ? ? ? ? ? ? ? 2.188 ? ? metalc9 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 203 A HOH 315 1_555 ? ? ? ? ? ? ? 2.187 ? ? metalc10 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 203 A HOH 330 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc11 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 203 A HOH 332 1_555 ? ? ? ? ? ? ? 2.183 ? ? metalc12 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 203 A HOH 356 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc13 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 203 A HOH 399 1_555 ? ? ? ? ? ? ? 2.181 ? ? hydrog1 hydrog ? ? A C 1 N4 ? ? ? 1_555 A C 142 O2 ? ? A C 1 A C 142 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog2 hydrog ? ? A C 1 O2 ? ? ? 1_555 A C 142 N4 ? ? A C 1 A C 142 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog3 hydrog ? ? A A 2 N1 ? ? ? 1_555 A G 130 N2 ? ? A A 2 A G 130 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog4 hydrog ? ? A U 3 N3 ? ? ? 1_555 A A 92 N1 ? ? A U 3 A A 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A U 3 O4 ? ? ? 1_555 A A 92 N6 ? ? A U 3 A A 92 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 71 N1 ? ? A C 4 A G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 71 O6 ? ? A C 4 A G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 71 N2 ? ? A C 4 A G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 171 O6 ? ? A C 4 A G 169 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog10 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 70 N1 ? ? A C 5 A G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 70 O6 ? ? A C 5 A G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 70 N2 ? ? A C 5 A G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 69 N3 ? ? A G 6 A C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 6 N2 ? ? ? 1_555 A C 69 O2 ? ? A G 6 A C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 69 N4 ? ? A G 6 A C 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 7 N1 ? ? ? 1_555 A U 68 O2 ? ? A G 7 A U 68 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog17 hydrog ? ? A G 7 O6 ? ? ? 1_555 A U 68 N3 ? ? A G 7 A U 68 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog18 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 172 N7 ? ? A U 8 A A 170 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog19 hydrog ? ? A U 8 O2 ? ? ? 1_555 A A 172 N6 ? ? A U 8 A A 170 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog20 hydrog ? ? A C 11 N3 ? ? ? 1_555 A G 38 N1 ? ? A C 11 A G 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 11 N4 ? ? ? 1_555 A G 38 O6 ? ? A C 11 A G 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 11 O2 ? ? ? 1_555 A G 38 N2 ? ? A C 11 A G 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 37 N1 ? ? A C 12 A G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 37 O6 ? ? A C 12 A G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 37 N2 ? ? A C 12 A G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 36 N1 ? ? A C 13 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 36 O6 ? ? A C 13 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 36 N2 ? ? A C 13 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A A 14 N1 ? ? ? 1_555 A U 35 N3 ? ? A A 14 A U 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A A 14 N6 ? ? ? 1_555 A U 35 O4 ? ? A A 14 A U 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A A 15 N1 ? ? ? 1_555 A U 34 N3 ? ? A A 15 A U 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A A 15 N6 ? ? ? 1_555 A U 34 O4 ? ? A A 15 A U 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 16 N1 ? ? ? 1_555 A G 33 O6 ? ? A G 16 A G 33 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog34 hydrog ? ? A A 17 N1 ? ? ? 1_555 A G 32 N1 ? ? A A 17 A G 32 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog35 hydrog ? ? A A 17 N6 ? ? ? 1_555 A G 32 O6 ? ? A A 17 A G 32 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog36 hydrog ? ? A C 18 N3 ? ? ? 1_555 A G 31 N1 ? ? A C 18 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A C 18 N4 ? ? ? 1_555 A G 31 O6 ? ? A C 18 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 18 O2 ? ? ? 1_555 A G 31 N2 ? ? A C 18 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A A 19 N1 ? ? ? 1_555 A U 30 N3 ? ? A A 19 A U 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A A 19 N6 ? ? ? 1_555 A U 30 O4 ? ? A A 19 A U 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A A 19 N3 ? ? ? 1_555 A A 185 N6 ? ? A A 19 A A 183 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog42 hydrog ? ? A A 20 N1 ? ? ? 1_555 A U 29 N3 ? ? A A 20 A U 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A A 20 N6 ? ? ? 1_555 A U 29 O4 ? ? A A 20 A U 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A U 21 N3 ? ? ? 1_555 A G 28 O6 ? ? A U 21 A G 28 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog45 hydrog ? ? A U 21 O2 ? ? ? 1_555 A G 28 N1 ? ? A U 21 A G 28 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog46 hydrog ? ? A C 22 N3 ? ? ? 1_555 A G 27 N1 ? ? A C 22 A G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 22 N4 ? ? ? 1_555 A G 27 O6 ? ? A C 22 A G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A C 22 O2 ? ? ? 1_555 A G 27 N2 ? ? A C 22 A G 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 31 N2 ? ? ? 1_555 A A 186 N1 ? ? A G 31 A A 184 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog50 hydrog ? ? A G 31 N3 ? ? ? 1_555 A A 186 N6 ? ? A G 31 A A 184 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog51 hydrog ? ? A G 32 N2 ? ? ? 1_555 A A 187 N1 ? ? A G 32 A A 185 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog52 hydrog ? ? A G 32 N3 ? ? ? 1_555 A A 187 N6 ? ? A G 32 A A 185 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog53 hydrog ? ? A G 41 N1 ? ? ? 1_555 A C 65 N3 ? ? A G 41 A C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 41 N2 ? ? ? 1_555 A C 65 O2 ? ? A G 41 A C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 41 O6 ? ? ? 1_555 A C 65 N4 ? ? A G 41 A C 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A U 42 N3 ? ? ? 1_555 A G 64 O6 ? ? A U 42 A G 64 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog57 hydrog ? ? A U 42 O2 ? ? ? 1_555 A G 64 N1 ? ? A U 42 A G 64 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog58 hydrog ? ? A A 43 N1 ? ? ? 1_555 A U 63 N3 ? ? A A 43 A U 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A A 43 N6 ? ? ? 1_555 A U 63 O4 ? ? A A 43 A U 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A U 44 N3 ? ? ? 1_555 A A 62 N1 ? ? A U 44 A A 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A U 44 O4 ? ? ? 1_555 A A 62 N6 ? ? A U 44 A A 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A C 45 N3 ? ? ? 1_555 A G 61 N1 ? ? A C 45 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 45 N4 ? ? ? 1_555 A G 61 O6 ? ? A C 45 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A C 45 O2 ? ? ? 1_555 A G 61 N2 ? ? A C 45 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A A 46 N1 ? ? ? 1_555 A U 60 N3 ? ? A A 46 A U 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A A 46 N6 ? ? ? 1_555 A U 60 O4 ? ? A A 46 A U 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A U 47 N3 ? ? ? 1_555 A A 59 N1 ? ? A U 47 A A 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A U 47 O4 ? ? ? 1_555 A A 59 N6 ? ? A U 47 A A 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A G 48 N1 ? ? ? 1_555 A C 58 N3 ? ? A G 48 A C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A G 48 N2 ? ? ? 1_555 A C 58 O2 ? ? A G 48 A C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A G 48 O6 ? ? ? 1_555 A C 58 N4 ? ? A G 48 A C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A G 49 N1 ? ? ? 1_555 A C 57 N3 ? ? A G 49 A C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A G 49 N2 ? ? ? 1_555 A C 57 O2 ? ? A G 49 A C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A G 49 O6 ? ? ? 1_555 A C 57 N4 ? ? A G 49 A C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 50 O2 ? ? ? 1_555 A A 56 N6 ? ? A C 50 A A 56 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog76 hydrog ? ? A A 53 N1 ? ? ? 1_555 A U 109 N3 ? ? A A 53 A U 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A A 53 N6 ? ? ? 1_555 A U 109 O4 ? ? A A 53 A U 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A U 54 N3 ? ? ? 1_555 A A 108 N1 ? ? A U 54 A A 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A U 54 O4 ? ? ? 1_555 A A 108 N6 ? ? A U 54 A A 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A C 55 N3 ? ? ? 1_555 A G 107 N1 ? ? A C 55 A G 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A C 55 N4 ? ? ? 1_555 A G 107 O6 ? ? A C 55 A G 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A C 55 O2 ? ? ? 1_555 A G 107 N2 ? ? A C 55 A G 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A A 67 N3 ? ? ? 1_555 A A 172 N6 ? ? A A 67 A A 170 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog84 hydrog ? ? A G 72 N1 ? ? ? 1_555 A U 170 O4 ? ? A G 72 A U 168 1_555 ? ? ? ? ? ? TYPE_27_PAIR ? ? ? hydrog85 hydrog ? ? A G 72 O6 ? ? ? 1_555 A U 170 N3 ? ? A G 72 A U 168 1_555 ? ? ? ? ? ? TYPE_27_PAIR ? ? ? hydrog86 hydrog ? ? A U 73 N3 ? ? ? 1_555 A A 169 N1 ? ? A U 73 A A 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A U 73 O4 ? ? ? 1_555 A A 169 N6 ? ? A U 73 A A 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A U 74 N3 ? ? ? 1_555 A A 168 N1 ? ? A U 74 A A 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A U 74 O4 ? ? ? 1_555 A A 168 N6 ? ? A U 74 A A 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A G 75 N1 ? ? ? 1_555 A C 167 N3 ? ? A G 75 A C 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A G 75 N2 ? ? ? 1_555 A C 167 O2 ? ? A G 75 A C 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A G 75 O6 ? ? ? 1_555 A C 167 N4 ? ? A G 75 A C 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A A 76 N1 ? ? ? 1_555 A C 166 N4 ? ? A A 76 A C 164 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog94 hydrog ? ? A A 77 N1 ? ? ? 1_555 A U 165 N3 ? ? A A 77 A U 163 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? A A 77 N6 ? ? ? 1_555 A U 165 O4 ? ? A A 77 A U 163 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? A C 78 N3 ? ? ? 1_555 A G 164 N1 ? ? A C 78 A G 162 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? A C 78 N4 ? ? ? 1_555 A G 164 O6 ? ? A C 78 A G 162 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? A C 78 O2 ? ? ? 1_555 A G 164 N2 ? ? A C 78 A G 162 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? A A 79 N1 ? ? ? 1_555 A U 163 N3 ? ? A A 79 A U 161 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? A A 79 N6 ? ? ? 1_555 A U 163 O4 ? ? A A 79 A U 161 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? A C 80 N3 ? ? ? 1_555 A G 162 N1 ? ? A C 80 A G 160 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? A C 80 N4 ? ? ? 1_555 A G 162 O6 ? ? A C 80 A G 160 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? A C 80 O2 ? ? ? 1_555 A G 162 N2 ? ? A C 80 A G 160 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A U 81 N3 ? ? ? 1_555 A U 85 O2 ? ? A U 81 A U 85 1_555 ? ? ? ? ? ? TYPE_13_PAIR ? ? ? hydrog105 hydrog ? ? A U 81 O2 ? ? ? 1_555 A U 85 N3 ? ? A U 81 A U 85 1_555 ? ? ? ? ? ? TYPE_13_PAIR ? ? ? hydrog106 hydrog ? ? A A 84 N3 ? ? ? 1_555 A G 160 N2 ? ? A A 84 A G 158 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog107 hydrog ? ? A U 86 N3 ? ? ? 1_555 A U 150 O2 ? ? A U 86 A U 150 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog108 hydrog ? ? A U 86 O4 ? ? ? 1_555 A U 150 N3 ? ? A U 86 A U 150 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog109 hydrog ? ? A G 87 N1 ? ? ? 1_555 A C 149 N3 ? ? A G 87 A C 149 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? A G 87 N2 ? ? ? 1_555 A C 149 O2 ? ? A G 87 A C 149 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? A G 87 O6 ? ? ? 1_555 A C 149 N4 ? ? A G 87 A C 149 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? A G 88 N1 ? ? ? 1_555 A C 148 N3 ? ? A G 88 A C 148 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? A G 88 N2 ? ? ? 1_555 A C 148 O2 ? ? A G 88 A C 148 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? A G 88 O6 ? ? ? 1_555 A C 148 N4 ? ? A G 88 A C 148 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? A G 89 N1 ? ? ? 1_555 A C 147 N3 ? ? A G 89 A C 147 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? A G 89 N2 ? ? ? 1_555 A C 147 O2 ? ? A G 89 A C 147 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? A G 89 O6 ? ? ? 1_555 A C 147 N4 ? ? A G 89 A C 147 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? A U 90 N3 ? ? ? 1_555 A G 146 O6 ? ? A U 90 A G 146 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog119 hydrog ? ? A U 90 O2 ? ? ? 1_555 A G 146 N1 ? ? A U 90 A G 146 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog120 hydrog ? ? A U 91 N3 ? ? ? 1_555 A G 145 O6 ? ? A U 91 A G 145 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog121 hydrog ? ? A U 91 O2 ? ? ? 1_555 A G 145 N1 ? ? A U 91 A G 145 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog122 hydrog ? ? A A 93 N1 ? ? ? 1_555 A C 129 N4 ? ? A A 93 A C 129 1_555 ? ? ? ? ? ? TYPE_26_PAIR ? ? ? hydrog123 hydrog ? ? A A 93 N6 ? ? ? 1_555 A C 129 N3 ? ? A A 93 A C 129 1_555 ? ? ? ? ? ? TYPE_26_PAIR ? ? ? hydrog124 hydrog ? ? A A 95 N1 ? ? ? 1_555 A U 123 N3 ? ? A A 95 A U 123 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? A A 95 N6 ? ? ? 1_555 A U 123 O4 ? ? A A 95 A U 123 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? A A 95 N6 ? ? ? 1_555 A C 132 O2 ? ? A A 95 A C 132 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog127 hydrog ? ? A C 96 N3 ? ? ? 1_555 A G 122 N1 ? ? A C 96 A G 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? A C 96 N4 ? ? ? 1_555 A G 122 O6 ? ? A C 96 A G 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? A C 96 O2 ? ? ? 1_555 A G 122 N2 ? ? A C 96 A G 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? A G 97 N1 ? ? ? 1_555 A C 121 N3 ? ? A G 97 A C 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? A G 97 N2 ? ? ? 1_555 A C 121 O2 ? ? A G 97 A C 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? A G 97 O6 ? ? ? 1_555 A C 121 N4 ? ? A G 97 A C 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? A G 98 N2 ? ? ? 1_555 A A 116 N3 ? ? A G 98 A A 116 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog134 hydrog ? ? A G 98 N1 ? ? ? 1_555 A C 120 N3 ? ? A G 98 A C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? A G 98 N2 ? ? ? 1_555 A C 120 O2 ? ? A G 98 A C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? A G 98 O6 ? ? ? 1_555 A C 120 N4 ? ? A G 98 A C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? A U 99 N3 ? ? ? 1_555 A A 118 N1 ? ? A U 99 A A 118 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog138 hydrog ? ? A U 99 O2 ? ? ? 1_555 A A 118 N6 ? ? A U 99 A A 118 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog139 hydrog ? ? A G 101 N1 ? ? ? 1_555 A C 112 N3 ? ? A G 101 A C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? A G 101 N2 ? ? ? 1_555 A C 112 O2 ? ? A G 101 A C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? A G 101 O6 ? ? ? 1_555 A C 112 N4 ? ? A G 101 A C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? A G 102 N1 ? ? ? 1_555 A C 111 N3 ? ? A G 102 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? A G 102 N2 ? ? ? 1_555 A C 111 O2 ? ? A G 102 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? A G 102 O6 ? ? ? 1_555 A C 111 N4 ? ? A G 102 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? A G 103 N1 ? ? ? 1_555 A C 110 N3 ? ? A G 103 A C 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? A G 103 N2 ? ? ? 1_555 A C 110 O2 ? ? A G 103 A C 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? A G 103 O6 ? ? ? 1_555 A C 110 N4 ? ? A G 103 A C 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? A C 121 N4 ? ? ? 1_555 A G 133 O6 ? ? A C 121 A G 133 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog149 hydrog ? ? A C 124 N3 ? ? ? 1_555 A G 131 N1 ? ? A C 124 A G 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog150 hydrog ? ? A C 124 N4 ? ? ? 1_555 A G 131 O6 ? ? A C 124 A G 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog151 hydrog ? ? A C 124 O2 ? ? ? 1_555 A G 131 N2 ? ? A C 124 A G 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog152 hydrog ? ? A C 125 N3 ? ? ? 1_555 A G 130 N1 ? ? A C 125 A G 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog153 hydrog ? ? A C 125 N4 ? ? ? 1_555 A G 130 O6 ? ? A C 125 A G 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog154 hydrog ? ? A C 125 O2 ? ? ? 1_555 A G 130 N2 ? ? A C 125 A G 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog155 hydrog ? ? A U 126 O2 ? ? ? 1_555 A C 129 N4 ? ? A U 126 A C 129 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog156 hydrog ? ? A G 137 N1 ? ? ? 1_555 A C 178 N3 ? ? A G 137 A C 176 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog157 hydrog ? ? A G 137 N2 ? ? ? 1_555 A C 178 O2 ? ? A G 137 A C 176 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog158 hydrog ? ? A G 137 O6 ? ? ? 1_555 A C 178 N4 ? ? A G 137 A C 176 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog159 hydrog ? ? A A 138 N1 ? ? ? 1_555 A U 177 N3 ? ? A A 138 A U 175 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog160 hydrog ? ? A A 138 N6 ? ? ? 1_555 A U 177 O4 ? ? A A 138 A U 175 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog161 hydrog ? ? A C 139 N3 ? ? ? 1_555 A G 176 N1 ? ? A C 139 A G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog162 hydrog ? ? A C 139 N4 ? ? ? 1_555 A G 176 O6 ? ? A C 139 A G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog163 hydrog ? ? A C 139 O2 ? ? ? 1_555 A G 176 N2 ? ? A C 139 A G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog164 hydrog ? ? A U 140 N3 ? ? ? 1_555 A A 175 N1 ? ? A U 140 A A 173 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog165 hydrog ? ? A U 140 O4 ? ? ? 1_555 A A 175 N6 ? ? A U 140 A A 173 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog166 hydrog ? ? A G 141 N1 ? ? ? 1_555 A C 174 N3 A ? A G 141 A C 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog167 hydrog ? ? A G 141 N2 ? ? ? 1_555 A C 174 O2 A ? A G 141 A C 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog168 hydrog ? ? A G 141 O6 ? ? ? 1_555 A C 174 N4 A ? A G 141 A C 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog169 hydrog ? ? A G 151 N1 ? ? ? 1_555 A U 161 O2 ? ? A G 151 A U 159 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog170 hydrog ? ? A G 151 O6 ? ? ? 1_555 A U 161 N3 ? ? A G 151 A U 159 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog171 hydrog ? ? A C 152 N3 ? ? ? 1_555 A G 160 N1 ? ? A C 152 A G 158 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog172 hydrog ? ? A C 152 N4 ? ? ? 1_555 A G 160 O6 ? ? A C 152 A G 158 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog173 hydrog ? ? A C 152 O2 ? ? ? 1_555 A G 160 N2 ? ? A C 152 A G 158 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog174 hydrog ? ? A C 153 N3 ? ? ? 1_555 A G 159 N1 ? ? A C 153 A G 157 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog175 hydrog ? ? A C 153 N4 ? ? ? 1_555 A G 159 O6 ? ? A C 153 A G 157 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog176 hydrog ? ? A C 153 O2 ? ? ? 1_555 A G 159 N2 ? ? A C 153 A G 157 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog177 hydrog ? ? A U 154 O2 ? ? ? 1_555 A A 158 N6 ? ? A U 154 A A 156 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog178 hydrog ? ? A U 180 N3 ? ? ? 1_555 A A 191 N1 ? ? A U 178 A A 189 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog179 hydrog ? ? A U 180 O4 ? ? ? 1_555 A A 191 N6 ? ? A U 178 A A 189 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog180 hydrog ? ? A U 181 N3 ? ? ? 1_555 A A 190 N1 ? ? A U 179 A A 188 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog181 hydrog ? ? A U 181 O4 ? ? ? 1_555 A A 190 N6 ? ? A U 179 A A 188 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog182 hydrog ? ? A C 182 N3 ? ? ? 1_555 A G 189 N1 ? ? A C 180 A G 187 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog183 hydrog ? ? A C 182 N4 ? ? ? 1_555 A G 189 O6 ? ? A C 180 A G 187 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog184 hydrog ? ? A C 182 O2 ? ? ? 1_555 A G 189 N2 ? ? A C 180 A G 187 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog185 hydrog ? ? A C 183 N3 ? ? ? 1_555 A G 188 N1 ? ? A C 181 A G 186 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog186 hydrog ? ? A C 183 N4 ? ? ? 1_555 A G 188 O6 ? ? A C 181 A G 186 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog187 hydrog ? ? A C 183 O2 ? ? ? 1_555 A G 188 N2 ? ? A C 181 A G 186 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog188 hydrog ? ? A G 184 N2 ? ? ? 1_555 A A 187 N7 ? ? A G 182 A A 185 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? A G 133 ? A G 133 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 329 ? 1_555 94.8 ? 2 OP1 ? A G 133 ? A G 133 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 363 ? 1_555 172.8 ? 3 O ? F HOH . ? A HOH 329 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 363 ? 1_555 89.8 ? 4 OP1 ? A G 133 ? A G 133 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 366 ? 1_555 84.4 ? 5 O ? F HOH . ? A HOH 329 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 366 ? 1_555 90.1 ? 6 O ? F HOH . ? A HOH 363 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 366 ? 1_555 90.0 ? 7 OP1 ? A G 133 ? A G 133 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 370 ? 1_555 85.2 ? 8 O ? F HOH . ? A HOH 329 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 370 ? 1_555 179.9 ? 9 O ? F HOH . ? A HOH 363 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 370 ? 1_555 90.2 ? 10 O ? F HOH . ? A HOH 366 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 370 ? 1_555 89.9 ? 11 OP1 ? A G 133 ? A G 133 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 373 ? 1_555 95.6 ? 12 O ? F HOH . ? A HOH 329 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 373 ? 1_555 90.1 ? 13 O ? F HOH . ? A HOH 363 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 373 ? 1_555 89.9 ? 14 O ? F HOH . ? A HOH 366 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 373 ? 1_555 179.8 ? 15 O ? F HOH . ? A HOH 370 ? 1_555 MG ? C MG . ? A MG 202 ? 1_555 O ? F HOH . ? A HOH 373 ? 1_555 89.9 ? 16 O ? F HOH . ? A HOH 306 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 315 ? 1_555 179.7 ? 17 O ? F HOH . ? A HOH 306 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 330 ? 1_555 89.9 ? 18 O ? F HOH . ? A HOH 315 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 330 ? 1_555 89.8 ? 19 O ? F HOH . ? A HOH 306 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 332 ? 1_555 90.0 ? 20 O ? F HOH . ? A HOH 315 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 332 ? 1_555 90.2 ? 21 O ? F HOH . ? A HOH 330 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 332 ? 1_555 89.9 ? 22 O ? F HOH . ? A HOH 306 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 356 ? 1_555 90.2 ? 23 O ? F HOH . ? A HOH 315 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 356 ? 1_555 90.1 ? 24 O ? F HOH . ? A HOH 330 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 356 ? 1_555 179.9 ? 25 O ? F HOH . ? A HOH 332 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 356 ? 1_555 90.0 ? 26 O ? F HOH . ? A HOH 306 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 399 ? 1_555 89.9 ? 27 O ? F HOH . ? A HOH 315 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 399 ? 1_555 89.9 ? 28 O ? F HOH . ? A HOH 330 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 399 ? 1_555 90.3 ? 29 O ? F HOH . ? A HOH 332 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 399 ? 1_555 179.8 ? 30 O ? F HOH . ? A HOH 356 ? 1_555 MG ? D MG . ? A MG 203 ? 1_555 O ? F HOH . ? A HOH 399 ? 1_555 89.8 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MES 201 ? 6 'binding site for residue MES A 201' AC2 Software A MG 202 ? 6 'binding site for residue MG A 202' AC3 Software A MG 203 ? 6 'binding site for residue MG A 203' AC4 Software A NA 204 ? 5 'binding site for residue NA A 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 A A 169 ? A A 167 . ? 1_555 ? 2 AC1 6 U A 170 ? U A 168 . ? 1_555 ? 3 AC1 6 C A 174 ? C A 172 . ? 1_555 ? 4 AC1 6 A A 175 ? A A 173 . ? 1_555 ? 5 AC1 6 NA E . ? NA A 204 . ? 1_555 ? 6 AC1 6 HOH F . ? HOH A 305 . ? 1_555 ? 7 AC2 6 G A 133 ? G A 133 . ? 1_555 ? 8 AC2 6 HOH F . ? HOH A 329 . ? 1_555 ? 9 AC2 6 HOH F . ? HOH A 363 . ? 1_555 ? 10 AC2 6 HOH F . ? HOH A 366 . ? 1_555 ? 11 AC2 6 HOH F . ? HOH A 370 . ? 1_555 ? 12 AC2 6 HOH F . ? HOH A 373 . ? 1_555 ? 13 AC3 6 HOH F . ? HOH A 306 . ? 1_555 ? 14 AC3 6 HOH F . ? HOH A 315 . ? 1_555 ? 15 AC3 6 HOH F . ? HOH A 330 . ? 1_555 ? 16 AC3 6 HOH F . ? HOH A 332 . ? 1_555 ? 17 AC3 6 HOH F . ? HOH A 356 . ? 1_555 ? 18 AC3 6 HOH F . ? HOH A 399 . ? 1_555 ? 19 AC4 5 C A 1 ? C A 1 . ? 1_555 ? 20 AC4 5 U A 3 ? U A 3 . ? 1_555 ? 21 AC4 5 C A 142 ? C A 142 . ? 1_555 ? 22 AC4 5 A A 169 ? A A 167 . ? 1_555 ? 23 AC4 5 MES B . ? MES A 201 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OP2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 A _pdbx_validate_close_contact.auth_seq_id_1 95 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 "O2'" _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 G _pdbx_validate_close_contact.auth_seq_id_2 131 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C2 _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 U _pdbx_validate_rmsd_angle.auth_seq_id_1 85 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N1 _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 U _pdbx_validate_rmsd_angle.auth_seq_id_2 85 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 U _pdbx_validate_rmsd_angle.auth_seq_id_3 85 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 125.89 _pdbx_validate_rmsd_angle.angle_target_value 117.70 _pdbx_validate_rmsd_angle.angle_deviation 8.19 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.20 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/2,-y+1/2,-z 3 -x,y+1/2,-z+1/2 4 -x+1/2,-y,z+1/2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A U 155 A A U 156 2 1 Y 1 A U 155 B A U 157 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 MES O1 O N N 114 MES C2 C N N 115 MES C3 C N N 116 MES N4 N N N 117 MES C5 C N N 118 MES C6 C N N 119 MES C7 C N N 120 MES C8 C N N 121 MES S S N N 122 MES O1S O N N 123 MES O2S O N N 124 MES O3S O N N 125 MES H21 H N N 126 MES H22 H N N 127 MES H31 H N N 128 MES H32 H N N 129 MES HN4 H N N 130 MES H51 H N N 131 MES H52 H N N 132 MES H61 H N N 133 MES H62 H N N 134 MES H71 H N N 135 MES H72 H N N 136 MES H81 H N N 137 MES H82 H N N 138 MG MG MG N N 139 NA NA NA N N 140 U OP3 O N N 141 U P P N N 142 U OP1 O N N 143 U OP2 O N N 144 U "O5'" O N N 145 U "C5'" C N N 146 U "C4'" C N R 147 U "O4'" O N N 148 U "C3'" C N S 149 U "O3'" O N N 150 U "C2'" C N R 151 U "O2'" O N N 152 U "C1'" C N R 153 U N1 N N N 154 U C2 C N N 155 U O2 O N N 156 U N3 N N N 157 U C4 C N N 158 U O4 O N N 159 U C5 C N N 160 U C6 C N N 161 U HOP3 H N N 162 U HOP2 H N N 163 U "H5'" H N N 164 U "H5''" H N N 165 U "H4'" H N N 166 U "H3'" H N N 167 U "HO3'" H N N 168 U "H2'" H N N 169 U "HO2'" H N N 170 U "H1'" H N N 171 U H3 H N N 172 U H5 H N N 173 U H6 H N N 174 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 MES O1 C2 sing N N 118 MES O1 C6 sing N N 119 MES C2 C3 sing N N 120 MES C2 H21 sing N N 121 MES C2 H22 sing N N 122 MES C3 N4 sing N N 123 MES C3 H31 sing N N 124 MES C3 H32 sing N N 125 MES N4 C5 sing N N 126 MES N4 C7 sing N N 127 MES N4 HN4 sing N N 128 MES C5 C6 sing N N 129 MES C5 H51 sing N N 130 MES C5 H52 sing N N 131 MES C6 H61 sing N N 132 MES C6 H62 sing N N 133 MES C7 C8 sing N N 134 MES C7 H71 sing N N 135 MES C7 H72 sing N N 136 MES C8 S sing N N 137 MES C8 H81 sing N N 138 MES C8 H82 sing N N 139 MES S O1S doub N N 140 MES S O2S doub N N 141 MES S O3S sing N N 142 U OP3 P sing N N 143 U OP3 HOP3 sing N N 144 U P OP1 doub N N 145 U P OP2 sing N N 146 U P "O5'" sing N N 147 U OP2 HOP2 sing N N 148 U "O5'" "C5'" sing N N 149 U "C5'" "C4'" sing N N 150 U "C5'" "H5'" sing N N 151 U "C5'" "H5''" sing N N 152 U "C4'" "O4'" sing N N 153 U "C4'" "C3'" sing N N 154 U "C4'" "H4'" sing N N 155 U "O4'" "C1'" sing N N 156 U "C3'" "O3'" sing N N 157 U "C3'" "C2'" sing N N 158 U "C3'" "H3'" sing N N 159 U "O3'" "HO3'" sing N N 160 U "C2'" "O2'" sing N N 161 U "C2'" "C1'" sing N N 162 U "C2'" "H2'" sing N N 163 U "O2'" "HO2'" sing N N 164 U "C1'" N1 sing N N 165 U "C1'" "H1'" sing N N 166 U N1 C2 sing N N 167 U N1 C6 sing N N 168 U C2 O2 doub N N 169 U C2 N3 sing N N 170 U N3 C4 sing N N 171 U N3 H3 sing N N 172 U C4 O4 doub N N 173 U C4 C5 sing N N 174 U C5 C6 doub N N 175 U C5 H5 sing N N 176 U C6 H6 sing N N 177 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6GYV 'double helix' 6GYV 'a-form double helix' 6GYV 'hairpin loop' 6GYV 'mismatched base pair' 6GYV 'internal loop' 6GYV 'quadruple helix' 6GYV 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A U 85 1_555 A U 81 1_555 -2.314 -3.507 -0.030 -25.585 3.233 -175.756 1 A_U85:U81_A A 85 ? A 81 ? 13 2 1 A G 162 1_555 A C 80 1_555 -0.672 -0.020 0.149 -9.185 -11.966 7.646 2 A_G160:C80_A A 160 ? A 80 ? 19 1 1 A U 163 1_555 A A 79 1_555 0.119 -0.090 0.179 0.409 -12.445 -0.797 3 A_U161:A79_A A 161 ? A 79 ? 20 1 1 A G 164 1_555 A C 78 1_555 -0.511 -0.047 0.195 -2.154 -8.473 4.351 4 A_G162:C78_A A 162 ? A 78 ? 19 1 1 A U 165 1_555 A A 77 1_555 -0.131 -0.087 0.202 1.677 -7.829 -1.547 5 A_U163:A77_A A 163 ? A 77 ? 20 1 1 A C 166 1_555 A A 76 1_555 -2.014 0.212 -0.166 13.885 -14.270 4.951 6 A_C164:A76_A A 164 ? A 76 ? ? 1 1 A C 167 1_555 A G 75 1_555 0.537 -0.361 -0.043 10.464 -16.870 -1.406 7 A_C165:G75_A A 165 ? A 75 ? 19 1 1 A A 168 1_555 A U 74 1_555 -0.259 -0.093 0.088 -3.104 -8.499 9.634 8 A_A166:U74_A A 166 ? A 74 ? 20 1 1 A A 169 1_555 A U 73 1_555 0.100 -0.120 -0.341 -5.342 -9.207 3.975 9 A_A167:U73_A A 167 ? A 73 ? 20 1 1 A U 170 1_555 A G 72 1_555 -0.104 1.218 0.615 -20.183 4.947 -171.358 10 A_U168:G72_A A 168 ? A 72 ? 27 2 1 A C 4 1_555 A G 71 1_555 -0.138 -0.171 -0.489 3.818 -4.595 3.237 11 A_C4:G71_A A 4 ? A 71 ? 19 1 1 A C 5 1_555 A G 70 1_555 0.005 -0.230 -0.153 -2.936 -2.817 1.113 12 A_C5:G70_A A 5 ? A 70 ? 19 1 1 A G 6 1_555 A C 69 1_555 -0.003 -0.169 -0.253 -6.788 -2.185 -2.759 13 A_G6:C69_A A 6 ? A 69 ? 19 1 1 A G 7 1_555 A U 68 1_555 -2.559 -0.476 0.039 1.244 -0.812 3.135 14 A_G7:U68_A A 7 ? A 68 ? 28 1 1 A U 8 1_555 A A 172 1_555 4.217 -2.269 -0.501 8.473 -13.556 -97.927 15 A_U8:A170_A A 8 ? A 170 ? 24 4 1 A C 11 1_555 A G 38 1_555 0.526 -0.183 0.172 2.577 -13.544 3.185 16 A_C11:G38_A A 11 ? A 38 ? 19 1 1 A C 12 1_555 A G 37 1_555 0.727 -0.111 -0.118 6.733 -4.919 2.554 17 A_C12:G37_A A 12 ? A 37 ? 19 1 1 A C 13 1_555 A G 36 1_555 0.112 -0.126 -0.126 6.851 -9.581 0.556 18 A_C13:G36_A A 13 ? A 36 ? 19 1 1 A A 14 1_555 A U 35 1_555 -0.225 -0.163 0.150 -3.582 -12.968 -1.562 19 A_A14:U35_A A 14 ? A 35 ? 20 1 1 A A 15 1_555 A U 34 1_555 0.220 -0.027 0.732 3.969 -19.822 1.494 20 A_A15:U34_A A 15 ? A 34 ? 20 1 1 A G 16 1_555 A G 33 1_555 0.844 1.679 0.225 -4.485 -31.587 1.205 21 A_G16:G33_A A 16 ? A 33 ? ? ? 1 A A 17 1_555 A G 32 1_555 -0.078 1.589 0.132 -12.656 -15.569 -20.353 22 A_A17:G32_A A 17 ? A 32 ? 8 1 1 A C 18 1_555 A G 31 1_555 -0.027 -0.029 0.329 3.862 -17.708 -2.958 23 A_C18:G31_A A 18 ? A 31 ? 19 1 1 A A 19 1_555 A U 30 1_555 0.147 -0.210 0.401 1.732 -15.697 -0.339 24 A_A19:U30_A A 19 ? A 30 ? 20 1 1 A A 20 1_555 A U 29 1_555 -0.439 -0.115 0.290 -1.745 -23.497 -5.566 25 A_A20:U29_A A 20 ? A 29 ? 20 1 1 A U 21 1_555 A G 28 1_555 2.193 -0.457 0.251 -3.176 -22.574 -3.394 26 A_U21:G28_A A 21 ? A 28 ? 28 1 1 A C 22 1_555 A G 27 1_555 0.604 -0.237 0.011 -2.649 -9.472 -11.234 27 A_C22:G27_A A 22 ? A 27 ? 19 1 1 A G 41 1_555 A C 65 1_555 -0.495 -0.185 0.126 -9.341 -10.992 -2.932 28 A_G41:C65_A A 41 ? A 65 ? 19 1 1 A U 42 1_555 A G 64 1_555 1.918 -0.529 0.570 -4.976 -9.736 0.738 29 A_U42:G64_A A 42 ? A 64 ? 28 1 1 A A 43 1_555 A U 63 1_555 -0.029 -0.048 -0.076 2.703 -15.563 2.013 30 A_A43:U63_A A 43 ? A 63 ? 20 1 1 A U 44 1_555 A A 62 1_555 -0.055 -0.105 -0.018 2.701 -11.229 -2.438 31 A_U44:A62_A A 44 ? A 62 ? 20 1 1 A C 45 1_555 A G 61 1_555 0.155 -0.521 0.005 4.596 -12.933 -5.357 32 A_C45:G61_A A 45 ? A 61 ? 19 1 1 A A 46 1_555 A U 60 1_555 0.155 -0.300 0.064 -2.295 -11.212 2.445 33 A_A46:U60_A A 46 ? A 60 ? 20 1 1 A U 47 1_555 A A 59 1_555 -0.373 -0.152 0.080 -0.419 -13.792 4.585 34 A_U47:A59_A A 47 ? A 59 ? 20 1 1 A G 48 1_555 A C 58 1_555 0.184 -0.155 0.029 -11.796 -19.198 1.355 35 A_G48:C58_A A 48 ? A 58 ? 19 1 1 A G 49 1_555 A C 57 1_555 -0.165 -0.098 0.264 -17.447 -16.729 -1.826 36 A_G49:C57_A A 49 ? A 57 ? 19 1 1 A C 50 1_555 A A 56 1_555 4.317 -1.050 1.110 -21.686 -3.111 -9.511 37 A_C50:A56_A A 50 ? A 56 ? ? 1 1 A G 107 1_555 A C 55 1_555 0.019 -0.245 -0.055 -9.904 -13.207 -6.028 38 A_G107:C55_A A 107 ? A 55 ? 19 1 1 A A 108 1_555 A U 54 1_555 0.183 -0.086 0.059 -7.764 -13.001 -0.901 39 A_A108:U54_A A 108 ? A 54 ? 20 1 1 A U 109 1_555 A A 53 1_555 0.168 -0.088 -0.344 14.212 -4.971 3.537 40 A_U109:A53_A A 109 ? A 53 ? 20 1 1 A A 118 1_555 A U 99 1_555 -0.097 1.660 0.634 22.986 5.972 150.060 41 A_A118:U99_A A 118 ? A 99 ? 21 2 1 A C 120 1_555 A G 98 1_555 -0.113 -0.157 0.019 6.410 -17.021 1.941 42 A_C120:G98_A A 120 ? A 98 ? 19 1 1 A C 121 1_555 A G 97 1_555 0.056 -0.046 0.112 -4.584 -4.754 3.245 43 A_C121:G97_A A 121 ? A 97 ? 19 1 1 A G 122 1_555 A C 96 1_555 -0.073 -0.104 0.143 3.007 -5.907 -0.676 44 A_G122:C96_A A 122 ? A 96 ? 19 1 1 A U 123 1_555 A A 95 1_555 0.212 0.072 -0.224 13.927 -6.808 -2.852 45 A_U123:A95_A A 123 ? A 95 ? 20 1 1 A C 124 1_555 A G 131 1_555 0.050 -0.048 -0.010 4.869 -15.057 -1.964 46 A_C124:G131_A A 124 ? A 131 ? 19 1 1 A C 125 1_555 A G 130 1_555 0.216 -0.183 -0.198 7.690 3.216 -2.358 47 A_C125:G130_A A 125 ? A 130 ? 19 1 1 A A 93 1_555 A C 129 1_555 -0.123 -0.801 -0.055 6.944 14.481 170.562 48 A_A93:C129_A A 93 ? A 129 ? 26 2 1 A G 101 1_555 A C 112 1_555 -0.710 -0.136 -0.230 -6.442 -11.814 1.126 49 A_G101:C112_A A 101 ? A 112 ? 19 1 1 A G 102 1_555 A C 111 1_555 -0.173 -0.080 -0.155 -6.447 -6.709 0.828 50 A_G102:C111_A A 102 ? A 111 ? 19 1 1 A G 103 1_555 A C 110 1_555 0.161 -0.006 -0.188 -3.366 -0.967 0.092 51 A_G103:C110_A A 103 ? A 110 ? 19 1 1 A G 137 1_555 A C 178 1_555 -0.081 -0.381 -0.187 -2.816 0.626 -0.594 52 A_G137:C176_A A 137 ? A 176 ? 19 1 1 A A 138 1_555 A U 177 1_555 -0.472 -0.113 -0.269 -6.871 -4.754 4.930 53 A_A138:U175_A A 138 ? A 175 ? 20 1 1 A C 139 1_555 A G 176 1_555 0.401 -0.294 -0.093 0.288 -3.581 -2.841 54 A_C139:G174_A A 139 ? A 174 ? 19 1 1 A U 140 1_555 A A 175 1_555 0.045 0.089 -0.068 4.672 -6.365 7.005 55 A_U140:A173_A A 140 ? A 173 ? 20 1 1 A G 141 1_555 A C 174 1_555 -0.175 -0.212 -0.001 -3.770 -11.223 0.123 56 A_G141:C172_A A 141 ? A 172 ? 19 1 1 A C 142 1_555 A C 1 1_555 -2.010 -1.651 -0.104 -4.207 -5.679 -175.251 57 A_C142:C1_A A 142 ? A 1 ? 15 2 1 A A 92 1_555 A U 3 1_555 0.115 0.056 -0.292 -6.605 10.098 0.958 58 A_A92:U3_A A 92 ? A 3 ? 20 1 1 A U 91 1_555 A G 145 1_555 2.440 -0.732 -0.178 -3.684 -6.903 -7.205 59 A_U91:G145_A A 91 ? A 145 ? 28 1 1 A U 90 1_555 A G 146 1_555 2.208 -0.590 0.122 -4.099 -14.072 1.429 60 A_U90:G146_A A 90 ? A 146 ? 28 1 1 A G 89 1_555 A C 147 1_555 -0.192 -0.140 -0.123 -6.967 -13.990 1.130 61 A_G89:C147_A A 89 ? A 147 ? 19 1 1 A G 88 1_555 A C 148 1_555 -0.135 -0.146 0.003 -4.421 -0.978 2.433 62 A_G88:C148_A A 88 ? A 148 ? 19 1 1 A G 87 1_555 A C 149 1_555 -0.326 -0.088 -0.337 -15.072 -5.698 5.236 63 A_G87:C149_A A 87 ? A 149 ? 19 1 1 A U 86 1_555 A U 150 1_555 -2.113 -1.769 0.205 -20.727 -18.578 14.699 64 A_U86:U150_A A 86 ? A 150 ? 16 1 1 A U 161 1_555 A G 151 1_555 2.081 -0.446 0.174 -7.822 -13.386 -1.969 65 A_U159:G151_A A 159 ? A 151 ? 28 1 1 A G 160 1_555 A C 152 1_555 -0.569 -0.204 0.231 -7.109 -25.251 3.040 66 A_G158:C152_A A 158 ? A 152 ? 19 1 1 A G 159 1_555 A C 153 1_555 -0.091 -0.230 0.528 5.244 -15.559 0.515 67 A_G157:C153_A A 157 ? A 153 ? 19 1 1 A A 158 1_555 A U 154 1_555 -2.718 -0.295 -0.274 0.471 -11.472 -2.377 68 A_A156:U154_A A 156 ? A 154 ? ? ? 1 A U 180 1_555 A A 191 1_555 -0.354 0.046 0.248 13.472 -24.523 -4.435 69 A_U178:A189_A A 178 ? A 189 ? 20 1 1 A U 181 1_555 A A 190 1_555 -0.040 -0.147 0.057 15.127 -18.172 -0.458 70 A_U179:A188_A A 179 ? A 188 ? 20 1 1 A C 182 1_555 A G 189 1_555 0.247 -0.206 -0.074 5.460 -13.653 2.660 71 A_C180:G187_A A 180 ? A 187 ? 19 1 1 A C 183 1_555 A G 188 1_555 0.354 -0.089 0.138 5.396 0.084 -1.980 72 A_C181:G186_A A 181 ? A 186 ? 19 1 1 A G 184 1_555 A A 187 1_555 7.914 -5.117 1.691 23.559 5.913 -41.564 73 A_G182:A185_A A 182 ? A 185 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A U 85 1_555 A U 81 1_555 A G 162 1_555 A C 80 1_555 -2.899 2.714 0.456 -158.797 -70.059 -134.486 -1.346 -1.475 -0.181 35.130 -79.627 -177.512 1 AA_U85G160:C80U81_AA A 85 ? A 81 ? A 160 ? A 80 ? 1 A G 162 1_555 A C 80 1_555 A U 163 1_555 A A 79 1_555 -0.826 -1.474 3.011 -0.895 0.434 33.594 -2.614 1.294 3.013 0.751 1.548 33.609 2 AA_G160U161:A79C80_AA A 160 ? A 80 ? A 161 ? A 79 ? 1 A U 163 1_555 A A 79 1_555 A G 164 1_555 A C 78 1_555 0.195 -1.407 3.098 -0.795 8.875 30.886 -3.957 -0.479 2.598 16.245 1.455 32.115 3 AA_U161G162:C78A79_AA A 161 ? A 79 ? A 162 ? A 78 ? 1 A G 164 1_555 A C 78 1_555 A U 165 1_555 A A 77 1_555 -0.762 -1.145 3.206 -1.473 12.473 32.068 -3.739 1.076 2.624 21.573 2.548 34.379 4 AA_G162U163:A77C78_AA A 162 ? A 78 ? A 163 ? A 77 ? 1 A U 165 1_555 A A 77 1_555 A C 166 1_555 A A 76 1_555 0.255 -1.318 2.826 0.953 13.453 22.910 -5.570 -0.365 1.795 30.691 -2.173 26.539 5 AA_U163C164:A76A77_AA A 163 ? A 77 ? A 164 ? A 76 ? 1 A C 166 1_555 A A 76 1_555 A C 167 1_555 A G 75 1_555 -0.095 -0.773 3.355 -2.422 9.716 43.262 -1.929 -0.100 3.120 12.972 3.234 44.351 6 AA_C164C165:G75A76_AA A 164 ? A 76 ? A 165 ? A 75 ? 1 A C 167 1_555 A G 75 1_555 A A 168 1_555 A U 74 1_555 0.919 -1.816 3.428 -1.720 9.082 29.608 -5.082 -2.038 2.709 17.250 3.266 30.987 7 AA_C165A166:U74G75_AA A 165 ? A 75 ? A 166 ? A 74 ? 1 A A 168 1_555 A U 74 1_555 A A 169 1_555 A U 73 1_555 -0.615 -1.883 3.368 1.827 5.328 32.263 -4.241 1.400 2.989 9.497 -3.258 32.738 8 AA_A166A167:U73U74_AA A 166 ? A 74 ? A 167 ? A 73 ? 1 A A 169 1_555 A U 73 1_555 A U 170 1_555 A G 72 1_555 2.814 -1.396 -1.432 -86.899 -151.306 -105.458 0.339 1.614 -1.024 76.141 -43.730 -176.661 9 AA_A167U168:G72U73_AA A 167 ? A 73 ? A 168 ? A 72 ? 1 A U 170 1_555 A G 72 1_555 A C 4 1_555 A G 71 1_555 -3.537 2.023 -0.254 -148.876 -67.997 -51.921 -1.346 -1.070 -2.245 35.898 -78.596 -165.326 10 AA_U168C4:G71G72_AA A 168 ? A 72 ? A 4 ? A 71 ? 1 A C 4 1_555 A G 71 1_555 A C 5 1_555 A G 70 1_555 -0.077 -2.117 3.474 0.594 8.508 28.777 -5.794 0.267 2.748 16.661 -1.164 29.989 11 AA_C4C5:G70G71_AA A 4 ? A 71 ? A 5 ? A 70 ? 1 A C 5 1_555 A G 70 1_555 A G 6 1_555 A C 69 1_555 -0.435 -1.817 3.351 0.504 11.323 28.997 -5.394 0.900 2.476 21.600 -0.962 31.089 12 AA_C5G6:C69G70_AA A 5 ? A 70 ? A 6 ? A 69 ? 1 A G 6 1_555 A C 69 1_555 A G 7 1_555 A U 68 1_555 0.961 -2.362 2.909 -2.934 9.074 19.985 -8.630 -3.305 1.546 24.429 7.899 22.123 13 AA_G6G7:U68C69_AA A 6 ? A 69 ? A 7 ? A 68 ? 1 A G 7 1_555 A U 68 1_555 A U 8 1_555 A A 172 1_555 -1.487 -2.160 3.065 0.395 0.425 99.036 -1.426 0.984 3.054 0.279 -0.260 99.038 14 AA_G7U8:A170U68_AA A 7 ? A 68 ? A 8 ? A 170 ? 1 A C 11 1_555 A G 38 1_555 A C 12 1_555 A G 37 1_555 -0.622 -1.650 2.971 0.918 8.308 30.043 -4.402 1.304 2.420 15.650 -1.730 31.159 15 AA_C11C12:G37G38_AA A 11 ? A 38 ? A 12 ? A 37 ? 1 A C 12 1_555 A G 37 1_555 A C 13 1_555 A G 36 1_555 0.056 -1.886 3.250 1.054 4.365 27.449 -4.918 0.123 2.920 9.120 -2.202 27.807 16 AA_C12C13:G36G37_AA A 12 ? A 37 ? A 13 ? A 36 ? 1 A C 13 1_555 A G 36 1_555 A A 14 1_555 A U 35 1_555 -0.136 -1.826 3.356 -1.001 9.362 29.220 -5.191 0.071 2.660 17.979 1.923 30.669 17 AA_C13A14:U35G36_AA A 13 ? A 36 ? A 14 ? A 35 ? 1 A A 14 1_555 A U 35 1_555 A A 15 1_555 A U 34 1_555 0.115 -1.255 2.899 -1.366 1.498 36.223 -2.199 -0.353 2.840 2.408 2.194 36.278 18 AA_A14A15:U34U35_AA A 14 ? A 35 ? A 15 ? A 34 ? 1 A A 15 1_555 A U 34 1_555 A G 16 1_555 A G 33 1_555 0.618 -1.204 3.310 10.582 3.728 39.628 -2.128 0.292 3.242 5.370 -15.242 41.125 19 AA_A15G16:G33U34_AA A 15 ? A 34 ? A 16 ? A 33 ? 1 A G 16 1_555 A G 33 1_555 A A 17 1_555 A G 32 1_555 -1.517 -1.119 3.210 -2.738 11.192 24.428 -5.071 2.598 2.606 24.766 6.059 26.972 20 AA_G16A17:G32G33_AA A 16 ? A 33 ? A 17 ? A 32 ? 1 A A 17 1_555 A G 32 1_555 A C 18 1_555 A G 31 1_555 0.717 -0.965 2.932 -3.079 -1.862 27.708 -1.604 -2.140 2.895 -3.867 6.395 27.936 21 AA_A17C18:G31G32_AA A 17 ? A 32 ? A 18 ? A 31 ? 1 A C 18 1_555 A G 31 1_555 A A 19 1_555 A U 30 1_555 0.056 -1.524 3.105 -1.941 11.333 33.635 -3.955 -0.341 2.471 18.911 3.239 35.492 22 AA_C18A19:U30G31_AA A 18 ? A 31 ? A 19 ? A 30 ? 1 A A 19 1_555 A U 30 1_555 A A 20 1_555 A U 29 1_555 -0.448 -1.394 3.160 -1.092 4.978 31.016 -3.448 0.636 2.920 9.231 2.026 31.421 23 AA_A19A20:U29U30_AA A 19 ? A 30 ? A 20 ? A 29 ? 1 A A 20 1_555 A U 29 1_555 A U 21 1_555 A G 28 1_555 0.301 -1.040 3.239 3.440 3.656 47.991 -1.552 -0.105 3.170 4.480 -4.216 48.237 24 AA_A20U21:G28U29_AA A 20 ? A 29 ? A 21 ? A 28 ? 1 A U 21 1_555 A G 28 1_555 A C 22 1_555 A G 27 1_555 -0.449 -1.413 3.065 6.080 5.397 29.376 -3.645 1.930 2.626 10.394 -11.710 30.456 25 AA_U21C22:G27G28_AA A 21 ? A 28 ? A 22 ? A 27 ? 1 A G 41 1_555 A C 65 1_555 A U 42 1_555 A G 64 1_555 -0.044 -0.969 3.123 -1.597 9.167 41.665 -2.187 -0.089 2.857 12.698 2.212 42.647 26 AA_G41U42:G64C65_AA A 41 ? A 65 ? A 42 ? A 64 ? 1 A U 42 1_555 A G 64 1_555 A A 43 1_555 A U 63 1_555 -0.175 -1.363 2.768 5.387 13.881 27.231 -4.556 1.106 1.811 27.069 -10.504 30.968 27 AA_U42A43:U63G64_AA A 42 ? A 64 ? A 43 ? A 63 ? 1 A A 43 1_555 A U 63 1_555 A U 44 1_555 A A 62 1_555 0.270 -1.190 3.282 -0.057 15.154 30.114 -4.342 -0.475 2.423 27.115 0.102 33.634 28 AA_A43U44:A62U63_AA A 43 ? A 63 ? A 44 ? A 62 ? 1 A U 44 1_555 A A 62 1_555 A C 45 1_555 A G 61 1_555 1.178 -1.938 3.146 4.913 6.763 30.344 -4.750 -1.321 2.811 12.622 -9.169 31.448 29 AA_U44C45:G61A62_AA A 44 ? A 62 ? A 45 ? A 61 ? 1 A C 45 1_555 A G 61 1_555 A A 46 1_555 A U 60 1_555 0.221 -1.630 3.311 1.304 12.798 31.440 -4.690 -0.186 2.485 22.475 -2.290 33.908 30 AA_C45A46:U60G61_AA A 45 ? A 61 ? A 46 ? A 60 ? 1 A A 46 1_555 A U 60 1_555 A U 47 1_555 A A 59 1_555 0.202 -1.291 3.126 0.808 11.143 27.683 -4.563 -0.243 2.440 22.178 -1.608 29.811 31 AA_A46U47:A59U60_AA A 46 ? A 60 ? A 47 ? A 59 ? 1 A U 47 1_555 A A 59 1_555 A G 48 1_555 A C 58 1_555 0.557 -1.424 3.387 1.626 14.991 33.971 -4.157 -0.668 2.577 24.231 -2.629 37.077 32 AA_U47G48:C58A59_AA A 47 ? A 59 ? A 48 ? A 58 ? 1 A G 48 1_555 A C 58 1_555 A G 49 1_555 A C 57 1_555 -0.360 -1.918 3.321 -1.969 2.925 30.874 -4.136 0.297 3.146 5.473 3.684 31.069 33 AA_G48G49:C57C58_AA A 48 ? A 58 ? A 49 ? A 57 ? 1 A G 49 1_555 A C 57 1_555 A C 50 1_555 A A 56 1_555 -0.234 -1.210 3.446 -0.940 5.587 51.626 -1.770 0.202 3.311 6.394 1.075 51.915 34 AA_G49C50:A56C57_AA A 49 ? A 57 ? A 50 ? A 56 ? 1 A C 50 1_555 A A 56 1_555 A G 107 1_555 A C 55 1_555 -5.615 0.132 2.529 5.218 -5.124 60.838 0.301 5.687 2.072 -5.040 -5.133 61.234 35 AA_C50G107:C55A56_AA A 50 ? A 56 ? A 107 ? A 55 ? 1 A G 107 1_555 A C 55 1_555 A A 108 1_555 A U 54 1_555 -0.531 -1.613 3.076 -1.481 3.250 33.549 -3.264 0.693 2.931 5.610 2.557 33.733 36 AA_G107A108:U54C55_AA A 107 ? A 55 ? A 108 ? A 54 ? 1 A A 108 1_555 A U 54 1_555 A U 109 1_555 A A 53 1_555 0.512 -0.774 2.808 5.730 17.042 26.892 -3.855 -0.093 2.038 32.446 -10.909 32.256 37 AA_A108U109:A53U54_AA A 108 ? A 54 ? A 109 ? A 53 ? 1 A A 118 1_555 A U 99 1_555 A C 120 1_555 A G 98 1_555 -0.018 -4.464 1.133 118.005 -128.108 63.582 -1.311 0.860 3.377 -65.067 -59.935 175.049 38 AA_A118C120:G98U99_AA A 118 ? A 99 ? A 120 ? A 98 ? 1 A C 120 1_555 A G 98 1_555 A C 121 1_555 A G 97 1_555 -0.189 -1.766 3.483 -2.116 5.573 34.602 -3.784 -0.012 3.175 9.285 3.525 35.097 39 AA_C120C121:G97G98_AA A 120 ? A 98 ? A 121 ? A 97 ? 1 A C 121 1_555 A G 97 1_555 A G 122 1_555 A C 96 1_555 -0.869 -1.577 2.873 -1.276 8.969 27.029 -4.866 1.529 2.280 18.540 2.637 28.480 40 AA_C121G122:C96G97_AA A 121 ? A 97 ? A 122 ? A 96 ? 1 A G 122 1_555 A C 96 1_555 A U 123 1_555 A A 95 1_555 0.305 -1.221 2.983 2.054 6.502 32.530 -3.093 -0.230 2.708 11.450 -3.617 33.218 41 AA_G122U123:A95C96_AA A 122 ? A 96 ? A 123 ? A 95 ? 1 A U 123 1_555 A A 95 1_555 A C 124 1_555 A G 131 1_555 1.654 -1.680 3.218 2.472 8.844 42.982 -3.042 -1.990 2.920 11.908 -3.328 43.906 42 AA_U123C124:G131A95_AA A 123 ? A 95 ? A 124 ? A 131 ? 1 A C 124 1_555 A G 131 1_555 A C 125 1_555 A G 130 1_555 -0.254 -1.867 3.542 -4.935 -1.321 30.366 -3.232 -0.584 3.613 -2.500 9.337 30.783 43 AA_C124C125:G130G131_AA A 124 ? A 131 ? A 125 ? A 130 ? 1 A C 125 1_555 A G 130 1_555 A A 93 1_555 A C 129 1_555 -4.149 4.883 -3.836 159.977 -29.658 157.039 2.365 1.656 -4.739 -14.860 -80.156 176.570 44 AA_C125A93:C129G130_AA A 125 ? A 130 ? A 93 ? A 129 ? 1 A G 101 1_555 A C 112 1_555 A G 102 1_555 A C 111 1_555 -0.040 -1.681 3.232 -0.709 4.603 33.878 -3.554 -0.039 2.985 7.853 1.209 34.187 45 AA_G101G102:C111C112_AA A 101 ? A 112 ? A 102 ? A 111 ? 1 A G 102 1_555 A C 111 1_555 A G 103 1_555 A C 110 1_555 0.343 -1.821 3.143 1.229 5.321 30.355 -4.375 -0.425 2.802 10.059 -2.323 30.831 46 AA_G102G103:C110C111_AA A 102 ? A 111 ? A 103 ? A 110 ? 1 A G 137 1_555 A C 178 1_555 A A 138 1_555 A U 177 1_555 0.448 -2.197 3.328 0.817 8.076 28.717 -5.833 -0.713 2.637 15.886 -1.607 29.819 47 AA_G137A138:U175C176_AA A 137 ? A 176 ? A 138 ? A 175 ? 1 A A 138 1_555 A U 177 1_555 A C 139 1_555 A G 176 1_555 -0.868 -1.444 3.091 -1.249 6.130 34.308 -3.260 1.276 2.828 10.286 2.096 34.856 48 AA_A138C139:G174U175_AA A 138 ? A 175 ? A 139 ? A 174 ? 1 A C 139 1_555 A G 176 1_555 A U 140 1_555 A A 175 1_555 0.843 -1.664 3.065 1.783 8.842 28.201 -4.890 -1.323 2.488 17.585 -3.546 29.581 49 AA_C139U140:A173G174_AA A 139 ? A 174 ? A 140 ? A 173 ? 1 A U 140 1_555 A A 175 1_555 A G 141 1_555 A C 174 1_555 -0.679 -1.656 3.293 -0.293 10.206 32.262 -4.389 1.123 2.666 17.818 0.512 33.798 50 AA_U140G141:C172A173_AA A 140 ? A 173 ? A 141 ? A 172 ? 1 A G 141 1_555 A C 174 1_555 A C 142 1_555 A C 1 1_555 -0.111 -0.116 3.026 2.929 -2.275 126.231 -0.048 0.084 3.026 -1.275 -1.642 126.261 51 AA_G141C142:C1C172_AA A 141 ? A 172 ? A 142 ? A 1 ? 1 A C 142 1_555 A C 1 1_555 A A 92 1_555 A U 3 1_555 0.850 -3.220 -0.417 -171.000 -33.599 55.880 -1.658 -0.189 -0.383 -17.093 86.993 174.938 52 AA_C142A92:U3C1_AA A 142 ? A 1 ? A 92 ? A 3 ? 1 A A 92 1_555 A U 3 1_555 A U 91 1_555 A G 145 1_555 -1.418 0.625 -7.074 0.432 -17.675 -3.153 -22.564 -5.047 -0.598 79.943 1.953 -17.957 53 AA_A92U91:G145U3_AA A 92 ? A 3 ? A 91 ? A 145 ? 1 A U 91 1_555 A G 145 1_555 A U 90 1_555 A G 146 1_555 0.486 1.650 -3.151 -4.931 -3.545 -35.077 -3.179 1.462 -2.883 5.827 -8.106 -35.583 54 AA_U91U90:G146G145_AA A 91 ? A 145 ? A 90 ? A 146 ? 1 A U 90 1_555 A G 146 1_555 A G 89 1_555 A C 147 1_555 -0.056 1.252 -3.155 0.447 -4.847 -43.399 -2.122 -0.116 -3.005 6.529 0.602 -43.658 55 AA_U90G89:C147G146_AA A 90 ? A 146 ? A 89 ? A 147 ? 1 A G 89 1_555 A C 147 1_555 A G 88 1_555 A C 148 1_555 -0.087 1.817 -3.274 -2.429 -6.360 -31.280 -4.386 0.258 -2.858 11.623 -4.440 -31.994 56 AA_G89G88:C148C147_AA A 89 ? A 147 ? A 88 ? A 148 ? 1 A G 88 1_555 A C 148 1_555 A G 87 1_555 A C 149 1_555 -0.175 1.937 -2.930 1.250 -3.161 -26.362 -4.929 -0.664 -2.673 6.895 2.726 -26.576 57 AA_G88G87:C149C148_AA A 88 ? A 148 ? A 87 ? A 149 ? 1 A G 87 1_555 A C 149 1_555 A U 86 1_555 A U 150 1_555 0.540 1.190 -2.941 -2.868 -7.893 -36.721 -2.723 1.156 -2.591 12.331 -4.480 -37.637 58 AA_G87U86:U150C149_AA A 87 ? A 149 ? A 86 ? A 150 ? 1 A U 86 1_555 A U 150 1_555 A U 161 1_555 A G 151 1_555 -0.057 3.658 -3.190 -13.486 -12.603 -32.123 -7.113 1.343 -1.592 20.773 -22.230 -36.927 59 AA_U86U159:G151U150_AA A 86 ? A 150 ? A 159 ? A 151 ? 1 A U 161 1_555 A G 151 1_555 A G 160 1_555 A C 152 1_555 -0.016 1.245 -3.199 -2.961 -3.950 -45.176 -1.948 0.231 -3.080 5.123 -3.841 -45.431 60 AA_U159G158:C152G151_AA A 159 ? A 151 ? A 158 ? A 152 ? 1 A G 160 1_555 A C 152 1_555 A G 159 1_555 A C 153 1_555 -0.255 1.360 -3.470 -0.785 -8.338 -33.998 -3.537 -0.304 -3.066 13.998 -1.317 -34.984 61 AA_G158G157:C153C152_AA A 158 ? A 152 ? A 157 ? A 153 ? 1 A G 159 1_555 A C 153 1_555 A A 158 1_555 A U 154 1_555 -0.163 0.880 -3.236 7.115 -6.358 -40.292 -1.904 -0.968 -2.999 9.076 10.158 -41.361 62 AA_G157A156:U154C153_AA A 157 ? A 153 ? A 156 ? A 154 ? 1 A U 180 1_555 A A 191 1_555 A U 181 1_555 A A 190 1_555 0.079 -1.308 3.222 -3.463 2.461 36.925 -2.371 -0.573 3.111 3.870 5.446 37.160 63 AA_U178U179:A188A189_AA A 178 ? A 189 ? A 179 ? A 188 ? 1 A U 181 1_555 A A 190 1_555 A C 182 1_555 A G 189 1_555 0.281 -1.376 3.316 2.009 6.337 36.616 -2.986 -0.177 3.054 9.986 -3.166 37.194 64 AA_U179C180:G187A188_AA A 179 ? A 188 ? A 180 ? A 187 ? 1 A C 182 1_555 A G 189 1_555 A C 183 1_555 A G 188 1_555 -0.728 -1.674 3.117 -2.994 13.649 32.997 -4.434 0.811 2.322 22.800 5.002 35.758 65 AA_C180C181:G186G187_AA A 180 ? A 187 ? A 181 ? A 186 ? 1 A C 183 1_555 A G 188 1_555 A G 184 1_555 A A 187 1_555 -4.110 -1.713 2.675 1.820 17.774 55.156 -2.468 4.326 1.960 18.657 -1.910 57.761 66 AA_C181G182:A185G186_AA A 181 ? A 186 ? A 182 ? A 185 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4P9R _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 21 21 21' _space_group.name_Hall 'P 2ac 2ab' _space_group.IT_number 19 _space_group.crystal_system orthorhombic _space_group.id 1 # _atom_sites.entry_id 6GYV _atom_sites.fract_transf_matrix[1][1] 0.017352 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011667 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009214 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 25.62398 1.50364 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? MG ? ? ? ? ? ? ? ? ? MG2+ ? ? 9.95820 ? 3.10187 ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 19.97189 1.75589 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? NA ? ? 9.38062 1.54875 3.38349 72.32734 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 15.80542 1.70748 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O1- ? ? 5.12366 3.84317 3.49406 27.47979 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 1.42069 35.72801 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 1.23737 29.19336 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_