HEADER VIRUS 05-JUL-18 6GZV TITLE IDENTIFICATION OF A DRUGGABLE VP1-VP3 INTERPROTOMER POCKET IN THE TITLE 2 CAPSID OF ENTEROVIRUSES COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CAPSID PROTEIN VP2; COMPND 7 CHAIN: B; COMPND 8 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: CAPSID PROTEIN VP3; COMPND 11 CHAIN: C; COMPND 12 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: CAPSID PROTEIN VP4; COMPND 15 CHAIN: D; COMPND 16 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS B3 (STRAIN NANCY); SOURCE 3 ORGANISM_TAXID: 103903; SOURCE 4 STRAIN: NANCY; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS B3 (STRAIN NANCY); SOURCE 7 ORGANISM_TAXID: 103903; SOURCE 8 STRAIN: NANCY; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS B3 (STRAIN NANCY); SOURCE 11 ORGANISM_TAXID: 103903; SOURCE 12 STRAIN: NANCY; SOURCE 13 MOL_ID: 4; SOURCE 14 ORGANISM_SCIENTIFIC: COXSACKIEVIRUS B3 (STRAIN NANCY); SOURCE 15 ORGANISM_TAXID: 103903; SOURCE 16 STRAIN: NANCY KEYWDS INHIBITOR, COMPLEX, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR J.A.GERAETS,J.W.FLATT,A.DOMANSKA,S.J.BUTCHER REVDAT 4 15-MAY-24 6GZV 1 REMARK REVDAT 3 19-JUN-19 6GZV 1 JRNL REVDAT 2 12-JUN-19 6GZV 1 REMARK REVDAT 1 05-JUN-19 6GZV 0 JRNL AUTH R.ABDELNABI,J.A.GERAETS,Y.MA,C.MIRABELLI,J.W.FLATT, JRNL AUTH 2 A.DOMANSKA,L.DELANG,D.JOCHMANS,T.A.KUMAR,V.JAYAPRAKASH, JRNL AUTH 3 B.N.SINHA,P.LEYSSEN,S.J.BUTCHER,J.NEYTS JRNL TITL A NOVEL DRUGGABLE INTERPROTOMER POCKET IN THE CAPSID OF JRNL TITL 2 RHINO- AND ENTEROVIRUSES. JRNL REF PLOS BIOL. V. 17 00281 2019 JRNL REFN ESSN 1545-7885 JRNL PMID 31185007 JRNL DOI 10.1371/JOURNAL.PBIO.3000281 REMARK 2 REMARK 2 RESOLUTION. 4.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EPU, GCTF, RELION, RELION, RELION, REMARK 3 RELION, MDFF, COOT REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 4.000 REMARK 3 NUMBER OF PARTICLES : 4891 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6GZV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1200009577. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : COXSACKIEVIRUS B3 (STRAIN REMARK 245 NANCY) REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : COXSACKIEVIRUS B3 (STRAIN REMARK 245 NANCY) NCBI TAXONOMY ID: 103903 FULL, NON-ENVELOPED VIRION FROM REMARK 245 NATURAL SOURCE DIAMETER: ~314A TRIANGULATION: 1 (PT3) BENZENE REMARK 245 SULFONAMIDE DERIVATIVE MOLECULAR WEIGHT: 422DA BINDING SITES ON REMARK 245 CAPSID: 60 REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4700.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.809017 -0.500000 0.309017 366.80000 REMARK 350 BIOMT2 2 -0.500000 0.309017 -0.809017 366.80000 REMARK 350 BIOMT3 2 0.309017 -0.809017 -0.500000 366.80000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 366.80000 REMARK 350 BIOMT3 3 -1.000000 0.000000 0.000000 366.80000 REMARK 350 BIOMT1 4 0.809017 -0.500000 -0.309017 183.40000 REMARK 350 BIOMT2 4 -0.500000 -0.309017 -0.809017 480.14744 REMARK 350 BIOMT3 4 0.309017 0.809017 -0.500000 70.05256 REMARK 350 BIOMT1 5 0.500000 0.309017 -0.809017 183.40000 REMARK 350 BIOMT2 5 -0.309017 -0.809017 -0.500000 480.14744 REMARK 350 BIOMT3 5 -0.809017 0.500000 -0.309017 296.74744 REMARK 350 BIOMT1 6 -0.309017 -0.809017 -0.500000 480.14744 REMARK 350 BIOMT2 6 -0.809017 0.500000 -0.309017 296.74744 REMARK 350 BIOMT3 6 0.500000 0.309017 -0.809017 183.40000 REMARK 350 BIOMT1 7 -0.809017 0.500000 -0.309017 296.74744 REMARK 350 BIOMT2 7 0.500000 0.309017 -0.809017 183.40000 REMARK 350 BIOMT3 7 -0.309017 -0.809017 -0.500000 480.14744 REMARK 350 BIOMT1 8 -0.809017 -0.500000 -0.309017 480.14744 REMARK 350 BIOMT2 8 0.500000 -0.309017 -0.809017 296.74744 REMARK 350 BIOMT3 8 0.309017 -0.809017 0.500000 183.40000 REMARK 350 BIOMT1 9 -0.309017 0.809017 -0.500000 183.40000 REMARK 350 BIOMT2 9 -0.809017 -0.500000 -0.309017 480.14744 REMARK 350 BIOMT3 9 -0.500000 0.309017 0.809017 70.05256 REMARK 350 BIOMT1 10 0.500000 -0.309017 -0.809017 296.74744 REMARK 350 BIOMT2 10 -0.309017 0.809017 -0.500000 183.40000 REMARK 350 BIOMT3 10 0.809017 0.500000 0.309017 -113.34744 REMARK 350 BIOMT1 11 0.000000 0.000000 -1.000000 366.80000 REMARK 350 BIOMT2 11 -1.000000 0.000000 0.000000 366.80000 REMARK 350 BIOMT3 11 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 12 -0.500000 -0.309017 -0.809017 480.14744 REMARK 350 BIOMT2 12 0.309017 0.809017 -0.500000 70.05256 REMARK 350 BIOMT3 12 0.809017 -0.500000 -0.309017 183.40000 REMARK 350 BIOMT1 13 -0.500000 0.309017 -0.809017 366.80000 REMARK 350 BIOMT2 13 0.309017 -0.809017 -0.500000 366.80000 REMARK 350 BIOMT3 13 -0.809017 -0.500000 0.309017 366.80000 REMARK 350 BIOMT1 14 -0.309017 -0.809017 -0.500000 480.14744 REMARK 350 BIOMT2 14 0.809017 -0.500000 0.309017 70.05256 REMARK 350 BIOMT3 14 -0.500000 -0.309017 0.809017 183.40000 REMARK 350 BIOMT1 15 -0.809017 0.500000 -0.309017 296.74744 REMARK 350 BIOMT2 15 -0.500000 -0.309017 0.809017 183.40000 REMARK 350 BIOMT3 15 0.309017 0.809017 0.500000 -113.34744 REMARK 350 BIOMT1 16 0.500000 0.309017 -0.809017 183.40000 REMARK 350 BIOMT2 16 0.309017 0.809017 0.500000 -113.34744 REMARK 350 BIOMT3 16 0.809017 -0.500000 0.309017 70.05256 REMARK 350 BIOMT1 17 -0.500000 0.309017 -0.809017 366.80000 REMARK 350 BIOMT2 17 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 17 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 18 0.000000 0.000000 -1.000000 366.80000 REMARK 350 BIOMT2 18 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 18 0.000000 -1.000000 0.000000 366.80000 REMARK 350 BIOMT1 19 -0.500000 -0.309017 -0.809017 480.14744 REMARK 350 BIOMT2 19 -0.309017 -0.809017 0.500000 296.74744 REMARK 350 BIOMT3 19 -0.809017 0.500000 0.309017 183.40000 REMARK 350 BIOMT1 20 0.000000 -1.000000 0.000000 366.80000 REMARK 350 BIOMT2 20 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 20 -1.000000 0.000000 0.000000 366.80000 REMARK 350 BIOMT1 21 -0.809017 0.500000 0.309017 183.40000 REMARK 350 BIOMT2 21 0.500000 0.309017 0.809017 -113.34744 REMARK 350 BIOMT3 21 0.309017 0.809017 -0.500000 70.05256 REMARK 350 BIOMT1 22 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 22 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 22 0.309017 -0.809017 -0.500000 366.80000 REMARK 350 BIOMT1 23 -0.309017 0.809017 -0.500000 183.40000 REMARK 350 BIOMT2 23 0.809017 0.500000 0.309017 -113.34744 REMARK 350 BIOMT3 23 0.500000 -0.309017 -0.809017 296.74744 REMARK 350 BIOMT1 24 0.500000 -0.309017 -0.809017 296.74744 REMARK 350 BIOMT2 24 0.309017 -0.809017 0.500000 183.40000 REMARK 350 BIOMT3 24 -0.809017 -0.500000 -0.309017 480.14744 REMARK 350 BIOMT1 25 -0.809017 -0.500000 -0.309017 480.14744 REMARK 350 BIOMT2 25 -0.500000 0.309017 0.809017 70.05256 REMARK 350 BIOMT3 25 -0.309017 0.809017 -0.500000 183.40000 REMARK 350 BIOMT1 26 -0.309017 -0.809017 0.500000 296.74744 REMARK 350 BIOMT2 26 -0.809017 0.500000 0.309017 183.40000 REMARK 350 BIOMT3 26 -0.500000 -0.309017 -0.809017 480.14744 REMARK 350 BIOMT1 27 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 27 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 27 -0.500000 0.309017 -0.809017 366.80000 REMARK 350 BIOMT1 28 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 28 0.000000 -1.000000 0.000000 366.80000 REMARK 350 BIOMT3 28 0.000000 0.000000 -1.000000 366.80000 REMARK 350 BIOMT1 29 0.309017 0.809017 -0.500000 70.05256 REMARK 350 BIOMT2 29 0.809017 -0.500000 -0.309017 183.40000 REMARK 350 BIOMT3 29 -0.500000 -0.309017 -0.809017 480.14744 REMARK 350 BIOMT1 30 0.309017 -0.809017 -0.500000 366.80000 REMARK 350 BIOMT2 30 -0.809017 -0.500000 0.309017 366.80000 REMARK 350 BIOMT3 30 -0.500000 0.309017 -0.809017 366.80000 REMARK 350 BIOMT1 31 -1.000000 0.000000 0.000000 366.80000 REMARK 350 BIOMT2 31 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 31 0.000000 0.000000 -1.000000 366.80000 REMARK 350 BIOMT1 32 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 32 -0.500000 0.309017 -0.809017 366.80000 REMARK 350 BIOMT3 32 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 33 0.000000 -1.000000 0.000000 366.80000 REMARK 350 BIOMT2 33 0.000000 0.000000 -1.000000 366.80000 REMARK 350 BIOMT3 33 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 34 -0.809017 0.500000 0.309017 183.40000 REMARK 350 BIOMT2 34 -0.500000 -0.309017 -0.809017 480.14744 REMARK 350 BIOMT3 34 -0.309017 -0.809017 0.500000 296.74744 REMARK 350 BIOMT1 35 -0.500000 -0.309017 0.809017 183.40000 REMARK 350 BIOMT2 35 -0.309017 -0.809017 -0.500000 480.14744 REMARK 350 BIOMT3 35 0.809017 -0.500000 0.309017 70.05256 REMARK 350 BIOMT1 36 0.309017 0.809017 0.500000 -113.34744 REMARK 350 BIOMT2 36 -0.809017 0.500000 -0.309017 296.74744 REMARK 350 BIOMT3 36 -0.500000 -0.309017 0.809017 183.40000 REMARK 350 BIOMT1 37 0.809017 -0.500000 0.309017 70.05256 REMARK 350 BIOMT2 37 0.500000 0.309017 -0.809017 183.40000 REMARK 350 BIOMT3 37 0.309017 0.809017 0.500000 -113.34744 REMARK 350 BIOMT1 38 0.809017 0.500000 0.309017 -113.34744 REMARK 350 BIOMT2 38 0.500000 -0.309017 -0.809017 296.74744 REMARK 350 BIOMT3 38 -0.309017 0.809017 -0.500000 183.40000 REMARK 350 BIOMT1 39 0.309017 -0.809017 0.500000 183.40000 REMARK 350 BIOMT2 39 -0.809017 -0.500000 -0.309017 480.14744 REMARK 350 BIOMT3 39 0.500000 -0.309017 -0.809017 296.74744 REMARK 350 BIOMT1 40 -0.500000 0.309017 0.809017 70.05256 REMARK 350 BIOMT2 40 -0.309017 0.809017 -0.500000 183.40000 REMARK 350 BIOMT3 40 -0.809017 -0.500000 -0.309017 480.14744 REMARK 350 BIOMT1 41 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 41 -1.000000 0.000000 0.000000 366.80000 REMARK 350 BIOMT3 41 0.000000 -1.000000 0.000000 366.80000 REMARK 350 BIOMT1 42 0.500000 0.309017 0.809017 -113.34744 REMARK 350 BIOMT2 42 0.309017 0.809017 -0.500000 70.05256 REMARK 350 BIOMT3 42 -0.809017 0.500000 0.309017 183.40000 REMARK 350 BIOMT1 43 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 43 0.309017 -0.809017 -0.500000 366.80000 REMARK 350 BIOMT3 43 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 44 0.309017 0.809017 0.500000 -113.34744 REMARK 350 BIOMT2 44 0.809017 -0.500000 0.309017 70.05256 REMARK 350 BIOMT3 44 0.500000 0.309017 -0.809017 183.40000 REMARK 350 BIOMT1 45 0.809017 -0.500000 0.309017 70.05256 REMARK 350 BIOMT2 45 -0.500000 -0.309017 0.809017 183.40000 REMARK 350 BIOMT3 45 -0.309017 -0.809017 -0.500000 480.14744 REMARK 350 BIOMT1 46 -0.500000 -0.309017 0.809017 183.40000 REMARK 350 BIOMT2 46 0.309017 0.809017 0.500000 -113.34744 REMARK 350 BIOMT3 46 -0.809017 0.500000 -0.309017 296.74744 REMARK 350 BIOMT1 47 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 47 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 47 -0.809017 -0.500000 0.309017 366.80000 REMARK 350 BIOMT1 48 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 48 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 48 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 49 0.500000 0.309017 0.809017 -113.34744 REMARK 350 BIOMT2 49 -0.309017 -0.809017 0.500000 296.74744 REMARK 350 BIOMT3 49 0.809017 -0.500000 -0.309017 183.40000 REMARK 350 BIOMT1 50 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 50 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 50 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 51 0.809017 -0.500000 -0.309017 183.40000 REMARK 350 BIOMT2 51 0.500000 0.309017 0.809017 -113.34744 REMARK 350 BIOMT3 51 -0.309017 -0.809017 0.500000 296.74744 REMARK 350 BIOMT1 52 -0.809017 -0.500000 0.309017 366.80000 REMARK 350 BIOMT2 52 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 52 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 53 0.309017 -0.809017 0.500000 183.40000 REMARK 350 BIOMT2 53 0.809017 0.500000 0.309017 -113.34744 REMARK 350 BIOMT3 53 -0.500000 0.309017 0.809017 70.05256 REMARK 350 BIOMT1 54 -0.500000 0.309017 0.809017 70.05256 REMARK 350 BIOMT2 54 0.309017 -0.809017 0.500000 183.40000 REMARK 350 BIOMT3 54 0.809017 0.500000 0.309017 -113.34744 REMARK 350 BIOMT1 55 0.809017 0.500000 0.309017 -113.34744 REMARK 350 BIOMT2 55 -0.500000 0.309017 0.809017 70.05256 REMARK 350 BIOMT3 55 0.309017 -0.809017 0.500000 183.40000 REMARK 350 BIOMT1 56 0.309017 0.809017 -0.500000 70.05256 REMARK 350 BIOMT2 56 -0.809017 0.500000 0.309017 183.40000 REMARK 350 BIOMT3 56 0.500000 0.309017 0.809017 -113.34744 REMARK 350 BIOMT1 57 0.309017 -0.809017 -0.500000 366.80000 REMARK 350 BIOMT2 57 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 57 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 58 -1.000000 0.000000 0.000000 366.80000 REMARK 350 BIOMT2 58 0.000000 -1.000000 0.000000 366.80000 REMARK 350 BIOMT3 58 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 59 -0.309017 -0.809017 0.500000 296.74744 REMARK 350 BIOMT2 59 0.809017 -0.500000 -0.309017 183.40000 REMARK 350 BIOMT3 59 0.500000 0.309017 0.809017 -113.34744 REMARK 350 BIOMT1 60 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 60 -0.809017 -0.500000 0.309017 366.80000 REMARK 350 BIOMT3 60 0.500000 -0.309017 0.809017 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 PRO A 2 REMARK 465 VAL A 3 REMARK 465 GLU A 4 REMARK 465 ASP A 5 REMARK 465 ALA A 6 REMARK 465 ILE A 7 REMARK 465 THR A 8 REMARK 465 ALA A 9 REMARK 465 ALA A 10 REMARK 465 ILE A 11 REMARK 465 GLY A 12 REMARK 465 GLY A 282 REMARK 465 ALA A 283 REMARK 465 PHE A 284 REMARK 465 SER B 1 REMARK 465 PRO B 2 REMARK 465 THR B 3 REMARK 465 VAL B 4 REMARK 465 GLU B 5 REMARK 465 GLU B 6 REMARK 465 CYS B 7 REMARK 465 GLN B 263 REMARK 465 MET D 1 REMARK 465 HIS D 13 REMARK 465 GLU D 14 REMARK 465 THR D 15 REMARK 465 ARG D 16 REMARK 465 LEU D 17 REMARK 465 ASN D 18 REMARK 465 ALA D 19 REMARK 465 SER D 20 REMARK 465 GLY D 21 REMARK 465 ASN D 22 REMARK 465 SER D 23 REMARK 465 ILE D 24 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR B 240 CB - CG - CD2 ANGL. DEV. = -4.4 DEGREES REMARK 500 TYR B 240 CB - CG - CD1 ANGL. DEV. = 4.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 20 -92.15 -126.80 REMARK 500 PRO A 22 156.09 -46.46 REMARK 500 ILE A 28 62.17 34.78 REMARK 500 ALA A 30 -63.67 -91.15 REMARK 500 MET A 48 -142.55 -161.66 REMARK 500 ARG A 51 -178.47 -69.97 REMARK 500 ARG A 59 47.38 -95.39 REMARK 500 SER A 60 -61.77 -93.36 REMARK 500 GLU A 61 26.95 -54.43 REMARK 500 TYR A 75 167.52 176.44 REMARK 500 SER A 82 95.96 -161.54 REMARK 500 ALA A 84 -87.39 -108.34 REMARK 500 LYS A 85 87.52 -67.90 REMARK 500 GLN A 96 -13.99 -156.01 REMARK 500 ILE A 136 83.86 57.64 REMARK 500 PRO A 145 153.39 -49.76 REMARK 500 ASP A 152 -89.01 -122.40 REMARK 500 ASP A 155 5.02 168.05 REMARK 500 THR A 163 -26.44 -141.30 REMARK 500 LEU A 210 -23.07 -147.14 REMARK 500 ILE A 246 88.32 41.21 REMARK 500 LEU A 252 -76.70 -105.91 REMARK 500 LYS A 259 2.50 -158.60 REMARK 500 ARG A 272 -157.00 -140.66 REMARK 500 GLN A 273 -109.49 -85.65 REMARK 500 TYR B 9 -137.12 52.90 REMARK 500 CYS B 28 -150.43 -174.71 REMARK 500 GLU B 46 -19.97 -143.63 REMARK 500 ASP B 57 -138.75 53.01 REMARK 500 ALA B 59 2.02 167.04 REMARK 500 THR B 60 44.75 -161.05 REMARK 500 CYS B 61 14.87 -156.23 REMARK 500 ASN B 88 -53.77 -132.08 REMARK 500 GLU B 129 56.90 76.13 REMARK 500 ASP B 138 5.07 -163.26 REMARK 500 ASP B 150 -3.66 104.03 REMARK 500 PHE B 155 -150.55 -83.68 REMARK 500 HIS B 189 -158.04 -163.16 REMARK 500 ILE B 192 76.58 -116.80 REMARK 500 THR B 196 122.02 -179.14 REMARK 500 ASN B 197 108.39 112.07 REMARK 500 ARG B 217 -14.24 -153.65 REMARK 500 SER B 237 -149.01 60.58 REMARK 500 TYR B 240 86.96 -173.77 REMARK 500 LEU B 257 82.44 -69.34 REMARK 500 ARG B 258 -135.56 -79.85 REMARK 500 SER C 16 14.12 -158.39 REMARK 500 ASP C 18 119.70 -170.01 REMARK 500 ALA C 24 -89.55 -89.87 REMARK 500 GLN C 27 16.04 80.71 REMARK 500 REMARK 500 THIS ENTRY HAS 74 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 189 0.06 SIDE CHAIN REMARK 500 TYR C 91 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-0103 RELATED DB: EMDB REMARK 900 IDENTIFICATION OF A DRUGGABLE VP1-VP3 INTERPROTOMER POCKET IN THE REMARK 900 CAPSID OF ENTEROVIRUSES DBREF 6GZV A 1 284 UNP P03313 POLG_CXB3N 571 854 DBREF 6GZV B 1 263 UNP P03313 POLG_CXB3N 70 332 DBREF 6GZV C 1 238 UNP P03313 POLG_CXB3N 333 570 DBREF 6GZV D 1 69 UNP P03313 POLG_CXB3N 1 69 SEQRES 1 A 284 GLY PRO VAL GLU ASP ALA ILE THR ALA ALA ILE GLY ARG SEQRES 2 A 284 VAL ALA ASP THR VAL GLY THR GLY PRO THR ASN SER GLU SEQRES 3 A 284 ALA ILE PRO ALA LEU THR ALA ALA GLU THR GLY HIS THR SEQRES 4 A 284 SER GLN VAL VAL PRO GLY ASP THR MET GLN THR ARG HIS SEQRES 5 A 284 VAL LYS ASN TYR HIS SER ARG SER GLU SER THR ILE GLU SEQRES 6 A 284 ASN PHE LEU CYS ARG SER ALA CYS VAL TYR PHE THR GLU SEQRES 7 A 284 TYR LYS ASN SER GLY ALA LYS ARG TYR ALA GLU TRP VAL SEQRES 8 A 284 LEU THR PRO ARG GLN ALA ALA GLN LEU ARG ARG LYS LEU SEQRES 9 A 284 GLU PHE PHE THR TYR VAL ARG PHE ASP LEU GLU LEU THR SEQRES 10 A 284 PHE VAL ILE THR SER THR GLN GLN PRO SER THR THR GLN SEQRES 11 A 284 ASN GLN ASP ALA GLN ILE LEU THR HIS GLN ILE MET TYR SEQRES 12 A 284 VAL PRO PRO GLY GLY PRO VAL PRO ASP LYS VAL ASP SER SEQRES 13 A 284 TYR VAL TRP GLN THR SER THR ASN PRO SER VAL PHE TRP SEQRES 14 A 284 THR GLU GLY ASN ALA PRO PRO ARG MET SER ILE PRO PHE SEQRES 15 A 284 LEU SER ILE GLY ASN ALA TYR SER ASN PHE TYR ASP GLY SEQRES 16 A 284 TRP SER GLU PHE SER ARG ASN GLY VAL TYR GLY ILE ASN SEQRES 17 A 284 THR LEU ASN ASN MET GLY THR LEU TYR ALA ARG HIS VAL SEQRES 18 A 284 ASN ALA GLY SER THR GLY PRO ILE LYS SER THR ILE ARG SEQRES 19 A 284 ILE TYR PHE LYS PRO LYS HIS VAL LYS ALA TRP ILE PRO SEQRES 20 A 284 ARG PRO PRO ARG LEU CYS GLN TYR GLU LYS ALA LYS ASN SEQRES 21 A 284 VAL ASN PHE GLN PRO SER GLY VAL THR THR THR ARG GLN SEQRES 22 A 284 SER ILE THR THR MET THR ASN THR GLY ALA PHE SEQRES 1 B 263 SER PRO THR VAL GLU GLU CYS GLY TYR SER ASP ARG ALA SEQRES 2 B 263 ARG SER ILE THR LEU GLY ASN SER THR ILE THR THR GLN SEQRES 3 B 263 GLU CYS ALA ASN VAL VAL VAL GLY TYR GLY VAL TRP PRO SEQRES 4 B 263 ASP TYR LEU LYS ASP SER GLU ALA THR ALA GLU ASP GLN SEQRES 5 B 263 PRO THR GLN PRO ASP VAL ALA THR CYS ARG PHE TYR THR SEQRES 6 B 263 LEU ASP SER VAL GLN TRP GLN LYS THR SER PRO GLY TRP SEQRES 7 B 263 TRP TRP LYS LEU PRO ASP ALA LEU SER ASN LEU GLY LEU SEQRES 8 B 263 PHE GLY GLN ASN MET GLN TYR HIS TYR LEU GLY ARG THR SEQRES 9 B 263 GLY TYR THR VAL HIS VAL GLN CYS ASN ALA SER LYS PHE SEQRES 10 B 263 HIS GLN GLY CYS LEU LEU VAL VAL CYS VAL PRO GLU ALA SEQRES 11 B 263 GLU MET GLY CYS ALA THR LEU ASP ASN THR PRO SER SER SEQRES 12 B 263 ALA GLU LEU LEU GLY GLY ASP THR ALA LYS GLU PHE ALA SEQRES 13 B 263 ASP LYS PRO VAL ALA SER GLY SER ASN LYS LEU VAL GLN SEQRES 14 B 263 ARG VAL VAL TYR ASN ALA GLY MET GLY VAL GLY VAL GLY SEQRES 15 B 263 ASN LEU THR ILE PHE PRO HIS GLN TRP ILE ASN LEU ARG SEQRES 16 B 263 THR ASN ASN SER ALA THR ILE VAL MET PRO TYR THR ASN SEQRES 17 B 263 SER VAL PRO MET ASP ASN MET PHE ARG HIS ASN ASN VAL SEQRES 18 B 263 THR LEU MET VAL ILE PRO PHE VAL PRO LEU ASP TYR CYS SEQRES 19 B 263 PRO GLY SER THR THR TYR VAL PRO ILE THR VAL THR ILE SEQRES 20 B 263 ALA PRO MET CYS ALA GLU TYR ASN GLY LEU ARG LEU ALA SEQRES 21 B 263 GLY HIS GLN SEQRES 1 C 238 GLY LEU PRO THR MET ASN THR PRO GLY SER CYS GLN PHE SEQRES 2 C 238 LEU THR SER ASP ASP PHE GLN SER PRO SER ALA MET PRO SEQRES 3 C 238 GLN TYR ASP VAL THR PRO GLU MET ARG ILE PRO GLY GLU SEQRES 4 C 238 VAL LYS ASN LEU MET GLU ILE ALA GLU VAL ASP SER VAL SEQRES 5 C 238 VAL PRO VAL GLN ASN VAL GLY GLU LYS VAL ASN SER MET SEQRES 6 C 238 GLU ALA TYR GLN ILE PRO VAL ARG SER ASN GLU GLY SER SEQRES 7 C 238 GLY THR GLN VAL PHE GLY PHE PRO LEU GLN PRO GLY TYR SEQRES 8 C 238 SER SER VAL PHE SER ARG THR LEU LEU GLY GLU ILE LEU SEQRES 9 C 238 ASN TYR TYR THR HIS TRP SER GLY SER ILE LYS LEU THR SEQRES 10 C 238 PHE MET PHE CYS GLY SER ALA MET ALA THR GLY LYS PHE SEQRES 11 C 238 LEU LEU ALA TYR SER PRO PRO GLY ALA GLY ALA PRO THR SEQRES 12 C 238 LYS ARG VAL ASP ALA MET LEU GLY THR HIS VAL ILE TRP SEQRES 13 C 238 ASP VAL GLY LEU GLN SER SER CYS VAL LEU CYS ILE PRO SEQRES 14 C 238 TRP ILE SER GLN THR HIS TYR ARG PHE VAL ALA SER ASP SEQRES 15 C 238 GLU TYR THR ALA GLY GLY PHE ILE THR CYS TRP TYR GLN SEQRES 16 C 238 THR ASN ILE VAL VAL PRO ALA ASP ALA GLN SER SER CYS SEQRES 17 C 238 TYR ILE MET CYS PHE VAL SER ALA CYS ASN ASP PHE SER SEQRES 18 C 238 VAL ARG LEU LEU LYS ASP THR PRO PHE ILE SER GLN GLN SEQRES 19 C 238 ASN PHE PHE GLN SEQRES 1 D 69 MET GLY ALA GLN VAL SER THR GLN LYS THR GLY ALA HIS SEQRES 2 D 69 GLU THR ARG LEU ASN ALA SER GLY ASN SER ILE ILE HIS SEQRES 3 D 69 TYR THR ASN ILE ASN TYR TYR LYS ASP ALA ALA SER ASN SEQRES 4 D 69 SER ALA ASN ARG GLN ASP PHE THR GLN ASP PRO GLY LYS SEQRES 5 D 69 PHE THR GLU PRO VAL LYS ASP ILE MET ILE LYS SER LEU SEQRES 6 D 69 PRO ALA LEU ASN HET FHK C 301 44 HETNAM FHK 4-[[4-[1,3-BIS(OXIDANYLIDENE)ISOINDOL-2- HETNAM 2 FHK YL]PHENYL]SULFONYLAMINO]BENZOIC ACID FORMUL 5 FHK C21 H14 N2 O6 S HELIX 1 AA1 VAL A 43 THR A 47 5 5 HELIX 2 AA2 THR A 63 CYS A 69 1 7 HELIX 3 AA3 ALA A 97 GLU A 105 1 9 HELIX 4 AA4 SER A 156 THR A 161 5 6 HELIX 5 AA5 LEU B 89 TYR B 98 1 10 HELIX 6 AA6 GLY B 180 PHE B 187 5 8 HELIX 7 AA7 LEU C 43 GLU C 48 1 6 HELIX 8 AA8 THR C 98 ASN C 105 1 8 HELIX 9 AA9 LYS C 144 MET C 149 1 6 SHEET 1 AA1 4 ALA A 72 LYS A 80 0 SHEET 2 AA1 4 ILE A 229 PRO A 247 -1 O PHE A 237 N ALA A 72 SHEET 3 AA1 4 PHE A 107 GLN A 124 -1 N THR A 108 O ILE A 246 SHEET 4 AA1 4 TYR A 189 SER A 190 -1 O TYR A 189 N VAL A 110 SHEET 1 AA2 4 ARG A 177 ILE A 180 0 SHEET 2 AA2 4 PHE A 107 GLN A 124 -1 N LEU A 116 O MET A 178 SHEET 3 AA2 4 ILE A 229 PRO A 247 -1 O ILE A 246 N THR A 108 SHEET 4 AA2 4 GLU C 39 VAL C 40 -1 O VAL C 40 N ALA A 244 SHEET 1 AA3 4 TYR A 87 VAL A 91 0 SHEET 2 AA3 4 THR A 215 HIS A 220 -1 O LEU A 216 N TRP A 90 SHEET 3 AA3 4 THR A 138 VAL A 144 -1 N MET A 142 O TYR A 217 SHEET 4 AA3 4 SER A 166 THR A 170 -1 O TRP A 169 N HIS A 139 SHEET 1 AA4 2 ARG B 14 LEU B 18 0 SHEET 2 AA4 2 SER B 21 THR B 25 -1 O ILE B 23 N ILE B 16 SHEET 1 AA5 5 VAL B 32 VAL B 33 0 SHEET 2 AA5 5 SER B 199 MET B 204 1 O VAL B 203 N VAL B 32 SHEET 3 AA5 5 HIS B 99 GLN B 111 -1 N VAL B 108 O ILE B 202 SHEET 4 AA5 5 VAL B 241 LEU B 257 -1 O THR B 244 N GLN B 111 SHEET 5 AA5 5 TYR B 64 THR B 65 -1 N TYR B 64 O ILE B 247 SHEET 1 AA6 5 VAL B 32 VAL B 33 0 SHEET 2 AA6 5 SER B 199 MET B 204 1 O VAL B 203 N VAL B 32 SHEET 3 AA6 5 HIS B 99 GLN B 111 -1 N VAL B 108 O ILE B 202 SHEET 4 AA6 5 VAL B 241 LEU B 257 -1 O THR B 244 N GLN B 111 SHEET 5 AA6 5 VAL B 69 TRP B 71 -1 N VAL B 69 O ILE B 243 SHEET 1 AA7 5 LYS B 153 GLU B 154 0 SHEET 2 AA7 5 TRP B 78 LYS B 81 -1 N TRP B 79 O LYS B 153 SHEET 3 AA7 5 THR B 222 ASP B 232 -1 O VAL B 225 N TRP B 78 SHEET 4 AA7 5 GLN B 119 VAL B 127 -1 N VAL B 127 O THR B 222 SHEET 5 AA7 5 HIS B 189 ASN B 193 -1 O GLN B 190 N VAL B 124 SHEET 1 AA8 3 SER C 51 VAL C 52 0 SHEET 2 AA8 3 SER C 207 ALA C 216 -1 O VAL C 214 N SER C 51 SHEET 3 AA8 3 GLN C 69 ARG C 73 -1 N ILE C 70 O ILE C 210 SHEET 1 AA9 4 SER C 51 VAL C 52 0 SHEET 2 AA9 4 SER C 207 ALA C 216 -1 O VAL C 214 N SER C 51 SHEET 3 AA9 4 ILE C 114 PHE C 120 -1 N MET C 119 O MET C 211 SHEET 4 AA9 4 SER C 163 ILE C 168 -1 O ILE C 168 N ILE C 114 SHEET 1 AB1 4 GLN C 81 PRO C 86 0 SHEET 2 AB1 4 PHE C 189 THR C 196 -1 O ILE C 190 N PHE C 85 SHEET 3 AB1 4 LYS C 129 SER C 135 -1 N ALA C 133 O THR C 191 SHEET 4 AB1 4 THR C 152 ASP C 157 -1 O TRP C 156 N PHE C 130 SHEET 1 AB2 3 ARG C 177 PHE C 178 0 SHEET 2 AB2 3 TYR C 107 SER C 111 -1 N TRP C 110 O ARG C 177 SHEET 3 AB2 3 SER C 221 LEU C 225 -1 O SER C 221 N SER C 111 SHEET 1 AB3 2 GLN D 4 SER D 6 0 SHEET 2 AB3 2 TYR D 27 ASN D 29 -1 O ASN D 29 N GLN D 4 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000