HEADER PROTEIN BINDING 09-JUL-18 6H0J TITLE A1-TYPE ACP DOMAIN FROM MODULE 5 OF MLSA1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYPE I MODULAR POLYKETIDE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: A FRAGMENT FROM THE FIFTH CHAIN EXTENSION MODULE OF COMPND 6 THE MLSA1 SUBUNIT OF THE MYCOLACTONE POLYKETIDE SYNTHASE SYSTEM SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM ULCERANS (STRAIN AGY99); SOURCE 3 ORGANISM_TAXID: 362242; SOURCE 4 STRAIN: AGY99; SOURCE 5 GENE: MLSA1, MUP040C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: TUNER KEYWDS ACYL CARRIER PROTEIN MYCOLACTONE POLYKETIDE SYNTHASE, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR L.MORETTO,R.HEYLEN,N.HOLROYD,S.VANCE,R.W.BROADHURST REVDAT 3 14-JUN-23 6H0J 1 REMARK REVDAT 2 08-MAY-19 6H0J 1 REMARK REVDAT 1 06-MAR-19 6H0J 0 JRNL AUTH L.MORETTO,R.HEYLEN,N.HOLROYD,S.VANCE,R.W.BROADHURST JRNL TITL MODULAR TYPE I POLYKETIDE SYNTHASE ACYL CARRIER PROTEIN JRNL TITL 2 DOMAINS SHARE A COMMON N-TERMINALLY EXTENDED FOLD. JRNL REF SCI REP V. 9 2325 2019 JRNL REFN ESSN 2045-2322 JRNL PMID 30787330 JRNL DOI 10.1038/S41598-019-38747-9 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA REMARK 3 AUTHORS : LINGE, O'DONOGHUE AND NILGES REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6H0J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1200010843. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298; 298 REMARK 210 PH : 7.5; 7.5 REMARK 210 IONIC STRENGTH : 150; 150 REMARK 210 PRESSURE : 1 ATM; 1 ATM REMARK 210 SAMPLE CONTENTS : 0.8 MM [U-13C; U-15N] MH0ACPA, REMARK 210 150 MM SODIUM CHLORIDE, 45 MM REMARK 210 SODIUM PHOSPHATE, 90% H2O/10% REMARK 210 D2O; 0.8 MM [U-15N] MH0ACPA, 150 REMARK 210 MM SODIUM CHLORIDE, 45 MM SODIUM REMARK 210 PHOSPHATE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-15N NOESY; REMARK 210 3D HNCA; 3D HN(CO)CA; 3D HNCACB; REMARK 210 3D CBCA(CO)NH; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, AZARA, CCPNMR ANALYSIS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 7 TYR A 37 CE1 TYR A 37 CZ -0.079 REMARK 500 8 TYR A 37 CE1 TYR A 37 CZ -0.081 REMARK 500 15 TYR A 37 CE1 TYR A 37 CZ -0.086 REMARK 500 15 TYR A 37 CZ TYR A 37 CE2 0.081 REMARK 500 19 TYR A 37 CE1 TYR A 37 CZ -0.088 REMARK 500 19 TYR A 37 CZ TYR A 37 CE2 0.086 REMARK 500 20 TYR A 37 CE1 TYR A 37 CZ -0.085 REMARK 500 20 TYR A 37 CZ TYR A 37 CE2 0.083 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 -72.83 67.22 REMARK 500 1 THR A 3 -77.69 -149.48 REMARK 500 1 ALA A 4 -56.27 67.46 REMARK 500 1 SER A 39 28.61 -151.44 REMARK 500 1 ASP A 55 -160.81 -166.04 REMARK 500 1 SER A 56 38.56 -76.16 REMARK 500 1 LEU A 57 -68.35 -143.95 REMARK 500 2 ALA A 4 -49.45 -167.39 REMARK 500 2 SER A 39 27.16 -147.20 REMARK 500 2 SER A 56 41.09 -78.50 REMARK 500 2 LEU A 57 -69.30 -144.05 REMARK 500 2 LEU A 74 -168.67 -102.61 REMARK 500 3 ALA A 4 -49.23 -148.85 REMARK 500 3 SER A 39 28.57 -151.38 REMARK 500 3 ASP A 55 -161.62 -165.29 REMARK 500 3 SER A 56 35.05 -74.95 REMARK 500 3 LEU A 57 -68.35 -142.86 REMARK 500 4 THR A 3 -87.14 -152.40 REMARK 500 4 ALA A 4 -58.44 65.57 REMARK 500 4 SER A 39 28.16 -152.39 REMARK 500 4 ASP A 55 -165.96 -160.18 REMARK 500 4 SER A 56 37.25 -78.19 REMARK 500 4 LEU A 57 -65.21 -143.75 REMARK 500 5 SER A 2 81.73 -150.74 REMARK 500 5 THR A 3 -61.11 -156.21 REMARK 500 5 ALA A 4 -59.09 68.67 REMARK 500 5 ALA A 38 -5.29 -141.35 REMARK 500 5 SER A 39 26.65 -151.98 REMARK 500 5 ASP A 55 -164.41 -161.04 REMARK 500 5 SER A 56 39.62 -78.10 REMARK 500 5 LEU A 57 -68.31 -143.65 REMARK 500 5 LEU A 74 -159.13 -98.95 REMARK 500 6 ALA A 4 -59.40 68.20 REMARK 500 6 SER A 39 33.76 -158.40 REMARK 500 6 SER A 56 36.98 -81.44 REMARK 500 6 LEU A 57 -67.60 -139.40 REMARK 500 6 LEU A 74 -159.87 -94.67 REMARK 500 6 THR A 77 32.25 -99.93 REMARK 500 7 THR A 3 -72.47 -156.58 REMARK 500 7 ALA A 4 -61.32 67.82 REMARK 500 7 SER A 39 22.70 -151.91 REMARK 500 7 GLU A 41 -75.20 -48.36 REMARK 500 7 SER A 42 54.55 -92.91 REMARK 500 7 ASP A 55 -150.71 -145.32 REMARK 500 7 SER A 56 35.56 -77.28 REMARK 500 7 LEU A 57 -66.83 -143.23 REMARK 500 8 ALA A 4 -45.04 -163.21 REMARK 500 8 SER A 39 30.21 -154.47 REMARK 500 8 ASP A 55 -160.13 -162.49 REMARK 500 8 SER A 56 38.42 -80.22 REMARK 500 REMARK 500 THIS ENTRY HAS 124 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34299 RELATED DB: BMRB REMARK 900 A1-TYPE ACP DOMAIN FROM MODULE 5 OF MLSA1 DBREF 6H0J A 2 100 UNP Q6MZA4 Q6MZA4_MYCUA 11087 11185 SEQADV 6H0J GLY A 1 UNP Q6MZA4 EXPRESSION TAG SEQRES 1 A 100 GLY SER THR ALA THR LEU LEU THR SER LYS LEU ALA GLY SEQRES 2 A 100 LEU THR ALA THR GLU GLN ARG ALA VAL THR ARG LYS LEU SEQRES 3 A 100 VAL LEU ASP GLN ALA ALA SER VAL LEU GLY TYR ALA SER SEQRES 4 A 100 THR GLU SER LEU ASP THR HIS GLU SER PHE LYS ASP LEU SEQRES 5 A 100 GLY PHE ASP SER LEU THR ALA LEU GLU LEU ARG ASP HIS SEQRES 6 A 100 LEU GLN THR ALA THR GLY LEU ASN LEU SER SER THR LEU SEQRES 7 A 100 ILE PHE ASP HIS PRO THR PRO HIS ALA VAL ALA GLU HIS SEQRES 8 A 100 LEU LEU GLU GLN ILE PRO GLY ILE GLY HELIX 1 AA1 ALA A 4 ALA A 12 1 9 HELIX 2 AA2 THR A 15 GLY A 36 1 22 HELIX 3 AA3 SER A 48 GLY A 53 1 6 HELIX 4 AA4 LEU A 57 GLY A 71 1 15 HELIX 5 AA5 THR A 77 HIS A 82 1 6 HELIX 6 AA6 THR A 84 LEU A 92 1 9 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1