HEADER GENE REGULATION 11-JUL-18 6H1E TITLE CRYSTAL STRUCTURE OF C21ORF127-TRMT112 IN COMPLEX WITH SAH AND H4 TITLE 2 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMK METHYLTRANSFERASE FAMILY MEMBER 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: M.HSAHEMK2P,N(6)-ADENINE-SPECIFIC DNA METHYLTRANSFERASE 1; COMPND 5 EC: 2.1.1.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: MULTIFUNCTIONAL METHYLTRANSFERASE SUBUNIT TRM112-LIKE COMPND 9 PROTEIN; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: TRNA METHYLTRANSFERASE 112 HOMOLOG; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: HISTONE H4 PEPTIDE; COMPND 15 CHAIN: S; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: N6AMT1, C21ORF127, HEMK2, PRED28; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: TRMT112, AD-001, HSPC152, HSPC170; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_COMMON: HUMAN; SOURCE 19 ORGANISM_TAXID: 9606 KEYWDS PROTEIN METHYLTRANSFERASE, HISTONE METHYLATION, COMPLEX, SAH, GENE KEYWDS 2 REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR S.WANG,B.HERMANN,E.METZGER,L.PENG,O.EINSLE,R.SCHUELE REVDAT 2 17-JAN-24 6H1E 1 REMARK REVDAT 1 22-MAY-19 6H1E 0 JRNL AUTH E.METZGER,S.WANG,S.URBAN,D.WILLMANN,A.SCHMIDT,A.OFFERMANN, JRNL AUTH 2 A.ALLEN,M.SUM,N.OBIER,F.COTTARD,S.ULFERTS,B.T.PRECA, JRNL AUTH 3 B.HERMANN,J.MAURER,H.GRESCHIK,V.HORNUNG,O.EINSLE,S.PERNER, JRNL AUTH 4 A.IMHOF,M.JUNG,R.SCHULE JRNL TITL KMT9 MONOMETHYLATES HISTONE H4 LYSINE 12 AND CONTROLS JRNL TITL 2 PROLIFERATION OF PROSTATE CANCER CELLS. JRNL REF NAT.STRUCT.MOL.BIOL. V. 26 361 2019 JRNL REFN ESSN 1545-9985 JRNL PMID 31061526 JRNL DOI 10.1038/S41594-019-0219-9 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 27325 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1349 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.0200 - 4.0900 1.00 2814 148 0.1573 0.2073 REMARK 3 2 4.0900 - 3.2500 1.00 2616 149 0.1601 0.2116 REMARK 3 3 3.2500 - 2.8400 1.00 2619 146 0.2007 0.2400 REMARK 3 4 2.8400 - 2.5800 1.00 2571 135 0.2088 0.2828 REMARK 3 5 2.5800 - 2.3900 1.00 2583 133 0.2041 0.2594 REMARK 3 6 2.3900 - 2.2500 1.00 2574 120 0.2180 0.2984 REMARK 3 7 2.2500 - 2.1400 1.00 2552 142 0.2360 0.2766 REMARK 3 8 2.1400 - 2.0500 1.00 2521 147 0.2629 0.2940 REMARK 3 9 2.0500 - 1.9700 1.00 2577 113 0.2958 0.3032 REMARK 3 10 1.9700 - 1.9000 1.00 2549 116 0.3463 0.3772 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.287 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.55 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2587 REMARK 3 ANGLE : 0.917 3510 REMARK 3 CHIRALITY : 0.055 404 REMARK 3 PLANARITY : 0.006 454 REMARK 3 DIHEDRAL : 7.239 1564 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'S' AND (RESID 11 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.5154 -20.8498 -25.0822 REMARK 3 T TENSOR REMARK 3 T11: 0.8958 T22: 0.7547 REMARK 3 T33: 0.5310 T12: -0.0955 REMARK 3 T13: 0.0037 T23: -0.2189 REMARK 3 L TENSOR REMARK 3 L11: 9.3503 L22: 3.3928 REMARK 3 L33: 0.0216 L12: -4.0396 REMARK 3 L13: 0.2214 L23: -0.0832 REMARK 3 S TENSOR REMARK 3 S11: 0.9850 S12: 0.5432 S13: -0.4383 REMARK 3 S21: -0.6414 S22: 0.2623 S23: -0.9183 REMARK 3 S31: 0.6133 S32: 0.4255 S33: -0.1853 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 7 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.9906 -10.2834 -21.1700 REMARK 3 T TENSOR REMARK 3 T11: 0.4067 T22: 0.6120 REMARK 3 T33: 0.5016 T12: -0.0815 REMARK 3 T13: 0.0591 T23: -0.1323 REMARK 3 L TENSOR REMARK 3 L11: 2.2833 L22: 3.4390 REMARK 3 L33: 2.3871 L12: 1.0709 REMARK 3 L13: -1.3777 L23: 0.9903 REMARK 3 S TENSOR REMARK 3 S11: 0.0305 S12: 0.1244 S13: 0.2036 REMARK 3 S21: -0.4299 S22: 0.1692 S23: -1.1619 REMARK 3 S31: -0.1265 S32: 1.3054 S33: -0.1339 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.1560 -4.6640 -22.6427 REMARK 3 T TENSOR REMARK 3 T11: 0.4010 T22: 0.2264 REMARK 3 T33: 0.1749 T12: -0.0508 REMARK 3 T13: 0.0310 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 1.9070 L22: 2.7633 REMARK 3 L33: 1.8182 L12: -0.7156 REMARK 3 L13: -0.1538 L23: 1.1771 REMARK 3 S TENSOR REMARK 3 S11: 0.0889 S12: 0.3299 S13: 0.0575 REMARK 3 S21: -0.6725 S22: 0.0538 S23: -0.2967 REMARK 3 S31: -0.4741 S32: 0.1204 S33: -0.0532 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.8334 -9.7278 -16.5934 REMARK 3 T TENSOR REMARK 3 T11: 0.2288 T22: 0.1522 REMARK 3 T33: 0.2236 T12: -0.0345 REMARK 3 T13: -0.0328 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 0.5869 L22: 1.8589 REMARK 3 L33: 2.1915 L12: -0.9874 REMARK 3 L13: -0.1946 L23: 0.6706 REMARK 3 S TENSOR REMARK 3 S11: 0.1761 S12: 0.1835 S13: 0.0372 REMARK 3 S21: -0.5064 S22: -0.0802 S23: 0.2042 REMARK 3 S31: -0.1104 S32: -0.1108 S33: 0.0081 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 130 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.4011 -26.3567 -17.5184 REMARK 3 T TENSOR REMARK 3 T11: 0.3949 T22: 0.2533 REMARK 3 T33: 0.2997 T12: 0.0024 REMARK 3 T13: -0.0221 T23: -0.0934 REMARK 3 L TENSOR REMARK 3 L11: 0.5569 L22: 1.4174 REMARK 3 L33: 2.0002 L12: -0.6793 REMARK 3 L13: -0.2335 L23: -0.4700 REMARK 3 S TENSOR REMARK 3 S11: 0.0435 S12: 0.2355 S13: -0.4261 REMARK 3 S21: 0.0906 S22: 0.0727 S23: 0.1099 REMARK 3 S31: 0.6031 S32: 0.1979 S33: -0.0806 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.4249 -15.5897 -23.2086 REMARK 3 T TENSOR REMARK 3 T11: 0.3295 T22: 0.2863 REMARK 3 T33: 0.2861 T12: -0.0286 REMARK 3 T13: -0.0899 T23: -0.0563 REMARK 3 L TENSOR REMARK 3 L11: 2.4740 L22: 1.3056 REMARK 3 L33: 2.2224 L12: 0.1730 REMARK 3 L13: -0.0530 L23: 0.3475 REMARK 3 S TENSOR REMARK 3 S11: 0.0933 S12: 0.3430 S13: -0.0942 REMARK 3 S21: -0.3352 S22: -0.1306 S23: 0.2141 REMARK 3 S31: 0.0606 S32: -0.3419 S33: 0.0528 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 178 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.4925 -21.6708 -29.7927 REMARK 3 T TENSOR REMARK 3 T11: 0.4597 T22: 0.5194 REMARK 3 T33: 0.4509 T12: -0.0681 REMARK 3 T13: -0.1959 T23: -0.0924 REMARK 3 L TENSOR REMARK 3 L11: 0.5062 L22: 4.0967 REMARK 3 L33: 1.2455 L12: -0.7476 REMARK 3 L13: -0.7713 L23: 1.4394 REMARK 3 S TENSOR REMARK 3 S11: -0.2601 S12: 0.6186 S13: -0.5901 REMARK 3 S21: -0.0983 S22: 0.2041 S23: 1.1077 REMARK 3 S31: 0.3615 S32: -0.1705 S33: 0.1887 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 189 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.1959 -16.1188 -32.8612 REMARK 3 T TENSOR REMARK 3 T11: 0.4546 T22: 0.4266 REMARK 3 T33: 0.2395 T12: -0.0185 REMARK 3 T13: -0.0898 T23: -0.0751 REMARK 3 L TENSOR REMARK 3 L11: 2.0617 L22: 2.5890 REMARK 3 L33: 2.8658 L12: -0.6890 REMARK 3 L13: -0.3697 L23: 1.4479 REMARK 3 S TENSOR REMARK 3 S11: 0.4039 S12: 0.3613 S13: -0.2126 REMARK 3 S21: -0.6604 S22: -0.2608 S23: 0.2071 REMARK 3 S31: -0.1473 S32: -0.2353 S33: 0.0163 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.5493 1.7313 -6.2607 REMARK 3 T TENSOR REMARK 3 T11: 0.1636 T22: 0.1650 REMARK 3 T33: 0.2629 T12: 0.0006 REMARK 3 T13: -0.0440 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 1.1195 L22: 2.7691 REMARK 3 L33: 2.1989 L12: -0.4874 REMARK 3 L13: 0.5059 L23: -0.1784 REMARK 3 S TENSOR REMARK 3 S11: -0.2715 S12: 0.1905 S13: 0.1515 REMARK 3 S21: -0.1684 S22: 0.1381 S23: 0.1679 REMARK 3 S31: 0.2232 S32: -0.0563 S33: -0.0165 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 10 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.0281 -4.1323 0.8574 REMARK 3 T TENSOR REMARK 3 T11: 0.1757 T22: 0.1874 REMARK 3 T33: 0.2411 T12: -0.0268 REMARK 3 T13: 0.0049 T23: 0.0351 REMARK 3 L TENSOR REMARK 3 L11: 1.6346 L22: 3.1923 REMARK 3 L33: 2.7082 L12: -0.4058 REMARK 3 L13: 0.8810 L23: -0.0573 REMARK 3 S TENSOR REMARK 3 S11: -0.0711 S12: -0.2400 S13: -0.2583 REMARK 3 S21: 0.1833 S22: 0.1817 S23: 0.2206 REMARK 3 S31: 0.3757 S32: -0.3645 S33: -0.0177 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 34 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.2893 10.0190 -14.2047 REMARK 3 T TENSOR REMARK 3 T11: 0.2850 T22: 0.2540 REMARK 3 T33: 0.2409 T12: 0.0041 REMARK 3 T13: -0.0606 T23: 0.0377 REMARK 3 L TENSOR REMARK 3 L11: 3.2862 L22: 2.7794 REMARK 3 L33: 1.9275 L12: -0.6289 REMARK 3 L13: 0.5170 L23: -0.2585 REMARK 3 S TENSOR REMARK 3 S11: 0.0966 S12: 0.4477 S13: 0.0689 REMARK 3 S21: -0.1655 S22: -0.0283 S23: 0.1981 REMARK 3 S31: -0.0426 S32: 0.1217 S33: -0.0016 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 52 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.5669 11.5474 0.0856 REMARK 3 T TENSOR REMARK 3 T11: 0.1709 T22: 0.2041 REMARK 3 T33: 0.3508 T12: 0.0643 REMARK 3 T13: -0.0450 T23: -0.0453 REMARK 3 L TENSOR REMARK 3 L11: 1.8054 L22: 3.0172 REMARK 3 L33: 2.3010 L12: -0.3006 REMARK 3 L13: -0.3373 L23: -0.0733 REMARK 3 S TENSOR REMARK 3 S11: -0.0778 S12: -0.3419 S13: 0.5400 REMARK 3 S21: 0.1434 S22: 0.0633 S23: 0.3765 REMARK 3 S31: -0.4523 S32: -0.4511 S33: -0.0359 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 75 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.8970 16.4236 -10.7054 REMARK 3 T TENSOR REMARK 3 T11: 0.2579 T22: 0.1984 REMARK 3 T33: 0.3274 T12: -0.0151 REMARK 3 T13: -0.1029 T23: 0.0674 REMARK 3 L TENSOR REMARK 3 L11: 3.6612 L22: 2.8333 REMARK 3 L33: 1.6245 L12: -0.4276 REMARK 3 L13: 0.6638 L23: -0.4060 REMARK 3 S TENSOR REMARK 3 S11: -0.0768 S12: 0.0453 S13: 0.3189 REMARK 3 S21: -0.5636 S22: 0.2348 S23: 0.4475 REMARK 3 S31: -0.1898 S32: -0.2909 S33: 0.0784 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 91 THROUGH 100 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.7044 0.4309 -0.4696 REMARK 3 T TENSOR REMARK 3 T11: 0.1586 T22: 0.1832 REMARK 3 T33: 0.2377 T12: -0.0060 REMARK 3 T13: -0.0317 T23: -0.0201 REMARK 3 L TENSOR REMARK 3 L11: 1.2179 L22: 3.0900 REMARK 3 L33: 1.1050 L12: -0.3227 REMARK 3 L13: 0.2289 L23: -0.6731 REMARK 3 S TENSOR REMARK 3 S11: -0.2238 S12: -0.0646 S13: -0.0586 REMARK 3 S21: 0.0208 S22: 0.1337 S23: -0.0208 REMARK 3 S31: -0.1637 S32: -0.0002 S33: 0.0469 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 101 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.7759 -9.5204 4.0614 REMARK 3 T TENSOR REMARK 3 T11: 0.1471 T22: 0.2671 REMARK 3 T33: 0.3675 T12: -0.0210 REMARK 3 T13: 0.0103 T23: 0.0861 REMARK 3 L TENSOR REMARK 3 L11: 6.1020 L22: 2.7926 REMARK 3 L33: 3.6254 L12: 1.2200 REMARK 3 L13: -3.1885 L23: -1.1410 REMARK 3 S TENSOR REMARK 3 S11: -0.1184 S12: -0.0601 S13: -0.0999 REMARK 3 S21: -0.1378 S22: 0.2732 S23: 0.8941 REMARK 3 S31: 0.0803 S32: -0.3794 S33: 0.0147 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 111 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.6576 -9.3754 -4.1361 REMARK 3 T TENSOR REMARK 3 T11: 0.2562 T22: 0.2036 REMARK 3 T33: 0.2662 T12: -0.0308 REMARK 3 T13: 0.0197 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 3.8929 L22: 5.9452 REMARK 3 L33: 3.1675 L12: 0.6024 REMARK 3 L13: 1.0554 L23: 0.4585 REMARK 3 S TENSOR REMARK 3 S11: 0.1659 S12: -0.0406 S13: -0.5926 REMARK 3 S21: 0.0643 S22: -0.2318 S23: 0.0955 REMARK 3 S31: 0.5896 S32: 0.1085 S33: 0.0165 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6H1E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1200010863. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27384 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 48.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 22.50 REMARK 200 R MERGE (I) : 0.18700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 1.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 21.90 REMARK 200 R MERGE FOR SHELL (I) : 2.74000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6H1D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 1.1-1.3 M SODIUM REMARK 280 CITRATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.61550 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.61550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 65.40400 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.61550 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.61550 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 65.40400 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.61550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.61550 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 65.40400 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.61550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.61550 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 65.40400 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, S REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 214 REMARK 465 MET B 1 REMARK 465 VAL B 17 REMARK 465 GLY B 18 REMARK 465 SER B 19 REMARK 465 SER B 120 REMARK 465 GLU B 121 REMARK 465 GLU B 122 REMARK 465 GLU B 123 REMARK 465 THR B 124 REMARK 465 GLU B 125 REMARK 465 SER B 126 REMARK 465 SER S 1 REMARK 465 GLY S 2 REMARK 465 ARG S 3 REMARK 465 GLY S 4 REMARK 465 LYS S 5 REMARK 465 GLY S 6 REMARK 465 GLY S 7 REMARK 465 LYS S 8 REMARK 465 GLY S 9 REMARK 465 LEU S 10 REMARK 465 LYS S 16 REMARK 465 ARG S 17 REMARK 465 HIS S 18 REMARK 465 ARG S 19 REMARK 465 LYS S 20 REMARK 465 VAL S 21 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 11 40.09 -151.35 REMARK 500 LEU A 104 -101.96 53.78 REMARK 500 MLZ S 12 61.05 37.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 301 DBREF 6H1E A 8 214 UNP Q9Y5N5 HEMK2_HUMAN 8 214 DBREF 6H1E B 3 126 UNP Q9UI30 TR112_HUMAN 2 125 DBREF 6H1E S 1 21 PDB 6H1E 6H1E 1 21 SEQADV 6H1E SER A 7 UNP Q9Y5N5 EXPRESSION TAG SEQADV 6H1E MET B 1 UNP Q9UI30 INITIATING METHIONINE SEQADV 6H1E GLY B 2 UNP Q9UI30 EXPRESSION TAG SEQRES 1 A 208 SER THR PRO PHE HIS GLY HIS VAL GLY ARG GLY ALA PHE SEQRES 2 A 208 SER ASP VAL TYR GLU PRO ALA GLU ASP THR PHE LEU LEU SEQRES 3 A 208 LEU ASP ALA LEU GLU ALA ALA ALA ALA GLU LEU ALA GLY SEQRES 4 A 208 VAL GLU ILE CYS LEU GLU VAL GLY SER GLY SER GLY VAL SEQRES 5 A 208 VAL SER ALA PHE LEU ALA SER MET ILE GLY PRO GLN ALA SEQRES 6 A 208 LEU TYR MET CYS THR ASP ILE ASN PRO GLU ALA ALA ALA SEQRES 7 A 208 CYS THR LEU GLU THR ALA ARG CYS ASN LYS VAL HIS ILE SEQRES 8 A 208 GLN PRO VAL ILE THR ASP LEU VAL LYS GLY LEU LEU PRO SEQRES 9 A 208 ARG LEU THR GLU LYS VAL ASP LEU LEU VAL PHE ASN PRO SEQRES 10 A 208 PRO TYR VAL VAL THR PRO PRO GLN GLU VAL GLY SER HIS SEQRES 11 A 208 GLY ILE GLU ALA ALA TRP ALA GLY GLY ARG ASN GLY ARG SEQRES 12 A 208 GLU VAL MET ASP ARG PHE PHE PRO LEU VAL PRO ASP LEU SEQRES 13 A 208 LEU SER PRO ARG GLY LEU PHE TYR LEU VAL THR ILE LYS SEQRES 14 A 208 GLU ASN ASN PRO GLU GLU ILE LEU LYS ILE MET LYS THR SEQRES 15 A 208 LYS GLY LEU GLN GLY THR THR ALA LEU SER ARG GLN ALA SEQRES 16 A 208 GLY GLN GLU THR LEU SER VAL LEU LYS PHE THR LYS SER SEQRES 1 B 126 MET GLY LYS LEU LEU THR HIS ASN LEU LEU SER SER HIS SEQRES 2 B 126 VAL ARG GLY VAL GLY SER ARG GLY PHE PRO LEU ARG LEU SEQRES 3 B 126 GLN ALA THR GLU VAL ARG ILE CYS PRO VAL GLU PHE ASN SEQRES 4 B 126 PRO ASN PHE VAL ALA ARG MET ILE PRO LYS VAL GLU TRP SEQRES 5 B 126 SER ALA PHE LEU GLU ALA ALA ASP ASN LEU ARG LEU ILE SEQRES 6 B 126 GLN VAL PRO LYS GLY PRO VAL GLU GLY TYR GLU GLU ASN SEQRES 7 B 126 GLU GLU PHE LEU ARG THR MET HIS HIS LEU LEU LEU GLU SEQRES 8 B 126 VAL GLU VAL ILE GLU GLY THR LEU GLN CYS PRO GLU SER SEQRES 9 B 126 GLY ARG MET PHE PRO ILE SER ARG GLY ILE PRO ASN MET SEQRES 10 B 126 LEU LEU SER GLU GLU GLU THR GLU SER SEQRES 1 S 21 SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY MLZ GLY SEQRES 2 S 21 GLY ALA LYS ARG HIS ARG LYS VAL HET MLZ S 12 10 HET SAH A 301 26 HETNAM MLZ N-METHYL-LYSINE HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE FORMUL 3 MLZ C7 H16 N2 O2 FORMUL 4 SAH C14 H20 N6 O5 S FORMUL 5 HOH *74(H2 O) HELIX 1 AA1 ARG A 16 SER A 20 5 5 HELIX 2 AA2 ALA A 26 ALA A 39 1 14 HELIX 3 AA3 ALA A 40 ALA A 44 5 5 HELIX 4 AA4 GLY A 57 GLY A 68 1 12 HELIX 5 AA5 ASN A 79 ASN A 93 1 15 HELIX 6 AA6 PRO A 129 VAL A 133 5 5 HELIX 7 AA7 GLY A 137 TRP A 142 5 6 HELIX 8 AA8 GLY A 145 GLY A 148 5 4 HELIX 9 AA9 ARG A 149 PHE A 156 1 8 HELIX 10 AB1 LEU A 158 LEU A 162 1 5 HELIX 11 AB2 ASN A 178 LYS A 189 1 12 HELIX 12 AB3 LYS B 3 ASN B 8 1 6 HELIX 13 AB4 ASN B 39 ILE B 47 1 9 HELIX 14 AB5 PRO B 48 VAL B 50 5 3 HELIX 15 AB6 GLU B 51 LEU B 62 1 12 HELIX 16 AB7 GLY B 74 GLU B 77 5 4 HELIX 17 AB8 ASN B 78 GLU B 91 1 14 SHEET 1 AA1 7 GLN A 98 ILE A 101 0 SHEET 2 AA1 7 LEU A 72 ASP A 77 1 N TYR A 73 O GLN A 98 SHEET 3 AA1 7 ILE A 48 VAL A 52 1 N CYS A 49 O MET A 74 SHEET 4 AA1 7 VAL A 116 PHE A 121 1 O VAL A 120 N VAL A 52 SHEET 5 AA1 7 LEU A 163 ILE A 174 1 O LEU A 168 N LEU A 119 SHEET 6 AA1 7 GLU A 204 THR A 212 -1 O LEU A 209 N LEU A 171 SHEET 7 AA1 7 GLN A 192 ALA A 201 -1 N LEU A 197 O VAL A 208 SHEET 1 AA2 4 ARG B 25 ILE B 33 0 SHEET 2 AA2 4 VAL B 92 GLN B 100 -1 O GLU B 93 N ARG B 32 SHEET 3 AA2 4 MET B 107 SER B 111 -1 O PHE B 108 N LEU B 99 SHEET 4 AA2 4 ILE B 114 PRO B 115 -1 O ILE B 114 N SER B 111 LINK C GLY S 11 N MLZ S 12 1555 1555 1.33 LINK C MLZ S 12 N GLY S 13 1555 1555 1.33 CISPEP 1 LEU A 109 PRO A 110 0 6.50 CISPEP 2 PHE B 22 PRO B 23 0 -3.31 SITE 1 AC1 21 TYR A 23 THR A 29 GLU A 51 GLY A 53 SITE 2 AC1 21 SER A 54 GLY A 55 VAL A 59 ASP A 77 SITE 3 AC1 21 ILE A 78 THR A 102 ASP A 103 LEU A 104 SITE 4 AC1 21 ASN A 122 ALA A 140 ARG A 154 HOH A 406 SITE 5 AC1 21 HOH A 412 HOH A 414 HOH A 420 HOH A 425 SITE 6 AC1 21 MLZ S 12 CRYST1 71.231 71.231 130.808 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014039 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014039 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007645 0.00000