HEADER STRUCTURAL PROTEIN 11-JUL-18 6H1F TITLE STRUCTURE OF THE NANOBODY-STABILIZED GELSOLIN D187N VARIANT (SECOND TITLE 2 DOMAIN) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GELSOLIN NANOBODY, NB11; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: GELSOLIN; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: AGEL,ACTIN-DEPOLYMERIZING FACTOR,ADF,BREVIN; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES; COMPND 11 OTHER_DETAILS: SECOND DOMAIN (G2) OF GELSOLIN PATHOLOGICAL VARIANT COMPND 12 D187N SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 3 ORGANISM_COMMON: LLAMA; SOURCE 4 ORGANISM_TAXID: 9844; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 GENE: GSN; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AMYLOIDOSIS, CALCIUM, MISFOLDING, NANOBODY, MUTATION, STRUCTURAL KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.HASSAN,M.MILANI,E.MASTRANGELO,M.DE ROSA REVDAT 2 17-JAN-24 6H1F 1 REMARK REVDAT 1 23-JAN-19 6H1F 0 JRNL AUTH T.GIORGINO,D.MATTIONI,A.HASSAN,M.MILANI,E.MASTRANGELO, JRNL AUTH 2 A.BARBIROLI,A.VERHELLE,J.GETTEMANS,M.M.BARZAGO,L.DIOMEDE, JRNL AUTH 3 M.DE ROSA JRNL TITL NANOBODY INTERACTION UNVEILS STRUCTURE, DYNAMICS AND JRNL TITL 2 PROTEOTOXICITY OF THE FINNISH-TYPE AMYLOIDOGENIC GELSOLIN JRNL TITL 3 VARIANT. JRNL REF BIOCHIM BIOPHYS ACTA MOL V.1865 648 2019 JRNL REF 2 BASIS DIS JRNL REFN ISSN 1879-260X JRNL PMID 30625383 JRNL DOI 10.1016/J.BBADIS.2019.01.010 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 17239 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1724 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.1550 - 4.3487 0.99 1403 156 0.1856 0.1913 REMARK 3 2 4.3487 - 3.4521 1.00 1327 147 0.1588 0.1827 REMARK 3 3 3.4521 - 3.0158 1.00 1310 146 0.1835 0.2299 REMARK 3 4 3.0158 - 2.7401 0.99 1285 143 0.2186 0.2704 REMARK 3 5 2.7401 - 2.5438 1.00 1289 143 0.2225 0.2666 REMARK 3 6 2.5438 - 2.3938 1.00 1280 142 0.2197 0.2709 REMARK 3 7 2.3938 - 2.2739 1.00 1280 143 0.2067 0.2354 REMARK 3 8 2.2739 - 2.1749 1.00 1284 142 0.2272 0.2755 REMARK 3 9 2.1749 - 2.0912 1.00 1264 141 0.2364 0.3257 REMARK 3 10 2.0912 - 2.0191 1.00 1267 140 0.2490 0.3102 REMARK 3 11 2.0191 - 1.9559 1.00 1264 141 0.2511 0.3166 REMARK 3 12 1.9559 - 1.9000 1.00 1262 140 0.2625 0.2714 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1823 REMARK 3 ANGLE : 0.786 2471 REMARK 3 CHIRALITY : 0.055 263 REMARK 3 PLANARITY : 0.008 332 REMARK 3 DIHEDRAL : 23.320 681 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.8264 23.5587 -25.7883 REMARK 3 T TENSOR REMARK 3 T11: 0.4704 T22: 0.4575 REMARK 3 T33: 0.4963 T12: 0.1565 REMARK 3 T13: 0.0382 T23: 0.0801 REMARK 3 L TENSOR REMARK 3 L11: 2.5001 L22: 2.4654 REMARK 3 L33: 7.0134 L12: -1.1977 REMARK 3 L13: 2.1763 L23: -1.7514 REMARK 3 S TENSOR REMARK 3 S11: -0.4718 S12: -0.4505 S13: 0.1356 REMARK 3 S21: 0.6015 S22: 0.5060 S23: 0.2083 REMARK 3 S31: -1.1366 S32: -0.7104 S33: -0.0458 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.8575 14.5672 -18.1011 REMARK 3 T TENSOR REMARK 3 T11: 0.3693 T22: 0.3050 REMARK 3 T33: 0.3222 T12: 0.0026 REMARK 3 T13: 0.0286 T23: 0.0827 REMARK 3 L TENSOR REMARK 3 L11: 1.3892 L22: 1.7313 REMARK 3 L33: 2.7813 L12: -0.2759 REMARK 3 L13: -0.2314 L23: -0.3562 REMARK 3 S TENSOR REMARK 3 S11: 0.0374 S12: 0.0785 S13: -0.0216 REMARK 3 S21: -0.0437 S22: 0.3447 S23: 0.4007 REMARK 3 S31: -0.1028 S32: -0.3696 S33: -0.2774 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.9383 9.7309 -29.0273 REMARK 3 T TENSOR REMARK 3 T11: 0.4033 T22: 0.3352 REMARK 3 T33: 0.5977 T12: -0.0645 REMARK 3 T13: -0.1122 T23: 0.0680 REMARK 3 L TENSOR REMARK 3 L11: 7.3259 L22: 1.0864 REMARK 3 L33: 1.0996 L12: -1.8569 REMARK 3 L13: 0.0536 L23: -0.8513 REMARK 3 S TENSOR REMARK 3 S11: 0.4002 S12: -0.4550 S13: -1.6364 REMARK 3 S21: -0.0527 S22: 0.0040 S23: 0.5855 REMARK 3 S31: 0.4132 S32: -0.5824 S33: -0.3940 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 52 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.2812 13.3929 -29.4493 REMARK 3 T TENSOR REMARK 3 T11: 0.3955 T22: 0.3665 REMARK 3 T33: 0.3164 T12: 0.0320 REMARK 3 T13: -0.0199 T23: 0.0377 REMARK 3 L TENSOR REMARK 3 L11: 5.9612 L22: 4.9927 REMARK 3 L33: 2.2561 L12: 0.1270 REMARK 3 L13: 3.5941 L23: -0.5488 REMARK 3 S TENSOR REMARK 3 S11: -0.0073 S12: 0.7308 S13: -0.2505 REMARK 3 S21: -0.8366 S22: -0.0709 S23: -0.1046 REMARK 3 S31: 0.2419 S32: 0.8519 S33: 0.0656 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 65 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.2502 21.7748 -27.1127 REMARK 3 T TENSOR REMARK 3 T11: 0.3730 T22: 0.3123 REMARK 3 T33: 0.3682 T12: 0.0187 REMARK 3 T13: -0.0871 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 6.9008 L22: 7.2547 REMARK 3 L33: 6.1065 L12: -1.5321 REMARK 3 L13: -2.0676 L23: 0.2107 REMARK 3 S TENSOR REMARK 3 S11: -0.0233 S12: -0.4097 S13: 0.6008 REMARK 3 S21: 0.1832 S22: 0.3198 S23: -0.5071 REMARK 3 S31: 0.1968 S32: 0.5367 S33: -0.3200 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.1009 12.0356 -26.9182 REMARK 3 T TENSOR REMARK 3 T11: 0.3316 T22: 0.2590 REMARK 3 T33: 0.3153 T12: -0.0215 REMARK 3 T13: -0.0601 T23: 0.0173 REMARK 3 L TENSOR REMARK 3 L11: 0.8133 L22: 3.3792 REMARK 3 L33: 3.7095 L12: -0.9029 REMARK 3 L13: 1.5333 L23: -3.4426 REMARK 3 S TENSOR REMARK 3 S11: 0.0644 S12: 0.0652 S13: -0.1950 REMARK 3 S21: -0.3893 S22: 0.3601 S23: 0.6210 REMARK 3 S31: 0.2598 S32: -0.2307 S33: -0.4220 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 111 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.4776 14.1156 -25.0493 REMARK 3 T TENSOR REMARK 3 T11: 0.2348 T22: 0.4960 REMARK 3 T33: 0.4386 T12: -0.0171 REMARK 3 T13: -0.0322 T23: 0.1905 REMARK 3 L TENSOR REMARK 3 L11: 4.2998 L22: 5.4054 REMARK 3 L33: 4.2331 L12: -4.0330 REMARK 3 L13: 3.5425 L23: -2.8912 REMARK 3 S TENSOR REMARK 3 S11: -0.1591 S12: -0.1595 S13: -0.3842 REMARK 3 S21: 0.0227 S22: 0.6510 S23: 1.0093 REMARK 3 S31: -0.1341 S32: -0.6812 S33: -0.4756 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 157 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.9160 -4.9347 -3.8252 REMARK 3 T TENSOR REMARK 3 T11: 0.2786 T22: 0.2738 REMARK 3 T33: 0.2534 T12: -0.0622 REMARK 3 T13: -0.0515 T23: 0.0399 REMARK 3 L TENSOR REMARK 3 L11: 8.9929 L22: 1.5570 REMARK 3 L33: 1.5507 L12: -1.0079 REMARK 3 L13: 0.1871 L23: -0.0614 REMARK 3 S TENSOR REMARK 3 S11: 0.2294 S12: -0.7182 S13: -0.6707 REMARK 3 S21: -0.0257 S22: -0.0576 S23: 0.2016 REMARK 3 S31: 0.1437 S32: -0.2139 S33: -0.1580 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 168 THROUGH 206 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.1807 -2.4837 -5.3358 REMARK 3 T TENSOR REMARK 3 T11: 0.2490 T22: 0.2058 REMARK 3 T33: 0.2478 T12: -0.0458 REMARK 3 T13: -0.0679 T23: 0.0415 REMARK 3 L TENSOR REMARK 3 L11: 3.3100 L22: 1.0548 REMARK 3 L33: 2.6939 L12: -0.7620 REMARK 3 L13: 0.1663 L23: -0.3590 REMARK 3 S TENSOR REMARK 3 S11: 0.1349 S12: -0.3244 S13: -0.2997 REMARK 3 S21: 0.1088 S22: -0.1001 S23: -0.0900 REMARK 3 S31: -0.0101 S32: 0.2733 S33: -0.0382 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 207 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.8749 -9.4221 -13.9583 REMARK 3 T TENSOR REMARK 3 T11: 0.3704 T22: 0.2631 REMARK 3 T33: 0.4097 T12: 0.0210 REMARK 3 T13: -0.0889 T23: -0.0876 REMARK 3 L TENSOR REMARK 3 L11: 9.2522 L22: 1.9475 REMARK 3 L33: 2.3546 L12: -0.6619 REMARK 3 L13: 1.4988 L23: -0.6846 REMARK 3 S TENSOR REMARK 3 S11: 0.3156 S12: 0.7172 S13: -1.2296 REMARK 3 S21: -0.2626 S22: -0.1194 S23: 0.2483 REMARK 3 S31: 0.3809 S32: 0.0131 S33: -0.1847 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 230 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1132 5.9448 -7.4263 REMARK 3 T TENSOR REMARK 3 T11: 0.2200 T22: 0.2398 REMARK 3 T33: 0.2503 T12: -0.0140 REMARK 3 T13: -0.0031 T23: -0.0282 REMARK 3 L TENSOR REMARK 3 L11: 1.3772 L22: 1.5527 REMARK 3 L33: 2.2175 L12: 0.2164 REMARK 3 L13: 1.0197 L23: 0.5537 REMARK 3 S TENSOR REMARK 3 S11: 0.1124 S12: -0.0779 S13: -0.0533 REMARK 3 S21: 0.0012 S22: -0.0837 S23: -0.1054 REMARK 3 S31: 0.0036 S32: 0.0670 S33: -0.0243 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6H1F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1200010893. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0062 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17289 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 46.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.16000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4S10 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M POTASSIUM THIOCYANATE, 30%W/V REMARK 280 PEG 2000 MME, PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 16.92950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.05550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.41750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.05550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 16.92950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 23.41750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 GLN A 1 REMARK 465 VAL A 129 REMARK 465 PRO A 130 REMARK 465 ARG A 131 REMARK 465 GLY A 132 REMARK 465 SER A 133 REMARK 465 HIS A 134 REMARK 465 HIS A 135 REMARK 465 HIS A 136 REMARK 465 HIS A 137 REMARK 465 HIS A 138 REMARK 465 HIS A 139 REMARK 465 GLY B 148 REMARK 465 SER B 149 REMARK 465 HIS B 150 REMARK 465 HIS B 151 REMARK 465 VAL B 152 REMARK 465 VAL B 153 REMARK 465 PRO B 154 REMARK 465 ASN B 155 REMARK 465 GLU B 156 REMARK 465 ASP B 259 REMARK 465 THR B 260 REMARK 465 ALA B 261 REMARK 465 LYS B 262 REMARK 465 GLU B 263 REMARK 465 ASP B 264 REMARK 465 ALA B 265 REMARK 465 ALA B 266 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 2 CG1 CG2 REMARK 470 LYS A 65 CG CD CE NZ REMARK 470 LEU A 128 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 341 O HOH B 349 2.16 REMARK 500 OG SER A 54 N SCN A 201 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 30 -168.36 -164.53 REMARK 500 LYS A 43 -160.23 -109.34 REMARK 500 SER A 126 -171.01 -68.47 REMARK 500 ARG B 168 -85.19 -149.59 REMARK 500 ARG B 228 72.72 -112.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 168 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SCN A 201 DBREF 6H1F A 0 139 PDB 6H1F 6H1F 0 139 DBREF 6H1F B 151 266 UNP P06396 GELS_HUMAN 178 293 SEQADV 6H1F GLY B 148 UNP P06396 EXPRESSION TAG SEQADV 6H1F SER B 149 UNP P06396 EXPRESSION TAG SEQADV 6H1F HIS B 150 UNP P06396 EXPRESSION TAG SEQADV 6H1F ASN B 187 UNP P06396 ASP 214 ENGINEERED MUTATION SEQRES 1 A 140 MET GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL SEQRES 2 A 140 GLN ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER SEQRES 3 A 140 GLY ARG THR PHE SER SER PHE VAL MET GLY TRP PHE ARG SEQRES 4 A 140 GLN ALA PRO GLY LYS GLU ARG GLU PHE VAL ALA SER ILE SEQRES 5 A 140 SER ARG SER GLY SER VAL THR ARG TYR ALA ASP SER ALA SEQRES 6 A 140 LYS GLY ARG PHE THR ILE SER LYS ASP ASN ALA LYS ASN SEQRES 7 A 140 THR VAL SER LEU GLN MET ASP ASN LEU ASN PRO ASP ASP SEQRES 8 A 140 THR ALA VAL TYR TYR CYS ALA ALA ASP LEU HIS ARG PRO SEQRES 9 A 140 TYR GLY PRO GLY SER GLN ARG THR ASP ASP TYR ASP THR SEQRES 10 A 140 TRP GLY GLN GLY THR GLN VAL THR VAL SER SER LEU VAL SEQRES 11 A 140 PRO ARG GLY SER HIS HIS HIS HIS HIS HIS SEQRES 1 B 119 GLY SER HIS HIS VAL VAL PRO ASN GLU VAL VAL VAL GLN SEQRES 2 B 119 ARG LEU PHE GLN VAL LYS GLY ARG ARG VAL VAL ARG ALA SEQRES 3 B 119 THR GLU VAL PRO VAL SER TRP GLU SER PHE ASN ASN GLY SEQRES 4 B 119 ASN CYS PHE ILE LEU ASP LEU GLY ASN ASN ILE HIS GLN SEQRES 5 B 119 TRP CYS GLY SER ASN SER ASN ARG TYR GLU ARG LEU LYS SEQRES 6 B 119 ALA THR GLN VAL SER LYS GLY ILE ARG ASP ASN GLU ARG SEQRES 7 B 119 SER GLY ARG ALA ARG VAL HIS VAL SER GLU GLU GLY THR SEQRES 8 B 119 GLU PRO GLU ALA MET LEU GLN VAL LEU GLY PRO LYS PRO SEQRES 9 B 119 ALA LEU PRO ALA GLY THR GLU ASP THR ALA LYS GLU ASP SEQRES 10 B 119 ALA ALA HET SCN A 201 3 HETNAM SCN THIOCYANATE ION FORMUL 3 SCN C N S 1- FORMUL 4 HOH *111(H2 O) HELIX 1 AA1 ASN A 87 THR A 91 5 5 HELIX 2 AA2 ARG A 110 TYR A 114 5 5 HELIX 3 AA3 SER B 179 PHE B 183 5 5 HELIX 4 AA4 ASN B 206 ARG B 225 1 20 HELIX 5 AA5 PRO B 240 GLY B 248 1 9 SHEET 1 AA1 4 GLN A 3 SER A 7 0 SHEET 2 AA1 4 LEU A 18 SER A 25 -1 O ALA A 23 N GLN A 5 SHEET 3 AA1 4 THR A 78 MET A 83 -1 O MET A 83 N LEU A 18 SHEET 4 AA1 4 PHE A 68 ASP A 73 -1 N THR A 69 O GLN A 82 SHEET 1 AA2 6 GLY A 10 VAL A 12 0 SHEET 2 AA2 6 THR A 121 VAL A 125 1 O THR A 124 N VAL A 12 SHEET 3 AA2 6 ALA A 92 ASP A 99 -1 N TYR A 94 O THR A 121 SHEET 4 AA2 6 VAL A 33 GLN A 39 -1 N GLY A 35 O ALA A 97 SHEET 5 AA2 6 ARG A 45 ILE A 51 -1 O ALA A 49 N TRP A 36 SHEET 6 AA2 6 THR A 58 TYR A 60 -1 O ARG A 59 N SER A 50 SHEET 1 AA3 4 GLY A 10 VAL A 12 0 SHEET 2 AA3 4 THR A 121 VAL A 125 1 O THR A 124 N VAL A 12 SHEET 3 AA3 4 ALA A 92 ASP A 99 -1 N TYR A 94 O THR A 121 SHEET 4 AA3 4 THR A 116 TRP A 117 -1 O THR A 116 N ALA A 98 SHEET 1 AA4 5 VAL B 171 VAL B 176 0 SHEET 2 AA4 5 ARG B 161 GLY B 167 -1 N GLN B 164 O THR B 174 SHEET 3 AA4 5 CYS B 188 ASP B 192 -1 O CYS B 188 N VAL B 165 SHEET 4 AA4 5 ASN B 196 CYS B 201 -1 O TRP B 200 N PHE B 189 SHEET 5 AA4 5 ARG B 230 GLU B 235 1 O HIS B 232 N ILE B 197 SSBOND 1 CYS B 188 CYS B 201 1555 1555 2.07 SITE 1 AC1 6 SER A 52 ARG A 53 SER A 54 TYR A 104 SITE 2 AC1 6 GLY A 105 HOH A 338 CRYST1 33.859 46.835 132.111 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029534 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021352 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007569 0.00000