HEADER TRANSCRIPTION 11-JUL-18 6H1H TITLE CRYSTAL STRUCTURE OF HUMAN PIRIN IN COMPLEX WITH COMPOUND 7 (PLX4720) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PIRIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROBABLE QUERCETIN 2,3-DIOXYGENASE PIR,PROBABLE COMPND 5 QUERCETINASE; COMPND 6 EC: 1.13.11.24; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PIR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS TRANSCRIPTIONAL COREGULATOR, QUERCETIN 2, 3-DIOXYGENASE, INHIBITOR, KEYWDS 2 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR S.ALI,Y.V.LE BIHAN,R.L.M.VAN MONTFORT REVDAT 3 17-JAN-24 6H1H 1 LINK REVDAT 2 16-JAN-19 6H1H 1 JRNL REVDAT 1 28-NOV-18 6H1H 0 JRNL AUTH J.MEYERS,N.E.A.CHESSUM,S.ALI,N.Y.MOK,B.WILDING,A.E.PASQUA, JRNL AUTH 2 M.ROWLANDS,M.J.TUCKER,L.E.EVANS,C.S.RYE,L.O'FEE, JRNL AUTH 3 Y.V.LE BIHAN,R.BURKE,M.CARTER,P.WORKMAN,J.BLAGG,N.BROWN, JRNL AUTH 4 R.L.M.VAN MONTFORT,K.JONES,M.D.CHEESEMAN JRNL TITL PRIVILEGED STRUCTURES AND POLYPHARMACOLOGY WITHIN AND JRNL TITL 2 BETWEEN PROTEIN FAMILIES. JRNL REF ACS MED CHEM LETT V. 9 1199 2018 JRNL REFN ISSN 1948-5875 JRNL PMID 30613326 JRNL DOI 10.1021/ACSMEDCHEMLETT.8B00364 REMARK 2 REMARK 2 RESOLUTION. 1.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 46353 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2337 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.90 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 928 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2280 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 870 REMARK 3 BIN R VALUE (WORKING SET) : 0.2280 REMARK 3 BIN FREE R VALUE : 0.2274 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.25 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2202 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 349 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.04 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.25490 REMARK 3 B22 (A**2) : -1.12280 REMARK 3 B33 (A**2) : -0.13210 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.180 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.073 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.072 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.067 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.068 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2384 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3239 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 811 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 453 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2384 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 296 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : 28 ; 1.000 ; HARMONIC REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2898 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.05 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.08 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.31 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|4 - 26} REMARK 3 ORIGIN FOR THE GROUP (A): 11.4609 69.4193 3.2068 REMARK 3 T TENSOR REMARK 3 T11: -0.0353 T22: 0.0071 REMARK 3 T33: -0.0730 T12: -0.0277 REMARK 3 T13: -0.0028 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 1.9853 L22: 2.5694 REMARK 3 L33: 1.4334 L12: 1.5480 REMARK 3 L13: -0.0058 L23: -0.4718 REMARK 3 S TENSOR REMARK 3 S11: -0.0841 S12: 0.3326 S13: -0.0441 REMARK 3 S21: -0.2770 S22: 0.1491 S23: 0.0198 REMARK 3 S31: 0.1161 S32: 0.1370 S33: -0.0651 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|27 - 119} REMARK 3 ORIGIN FOR THE GROUP (A): 16.5545 80.5412 13.0057 REMARK 3 T TENSOR REMARK 3 T11: -0.0497 T22: -0.0137 REMARK 3 T33: -0.0262 T12: -0.0048 REMARK 3 T13: -0.0036 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 1.2565 L22: 0.8149 REMARK 3 L33: 0.5569 L12: 0.0285 REMARK 3 L13: 0.2873 L23: 0.1414 REMARK 3 S TENSOR REMARK 3 S11: -0.0603 S12: 0.0690 S13: 0.0084 REMARK 3 S21: -0.0246 S22: 0.0637 S23: -0.0540 REMARK 3 S31: -0.0430 S32: 0.0351 S33: -0.0033 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {A|120 - 138} REMARK 3 ORIGIN FOR THE GROUP (A): 10.1251 83.8913 23.8530 REMARK 3 T TENSOR REMARK 3 T11: 0.0290 T22: 0.0524 REMARK 3 T33: -0.0042 T12: 0.0117 REMARK 3 T13: -0.0087 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 2.4098 L22: 1.8452 REMARK 3 L33: 0.8262 L12: -1.3318 REMARK 3 L13: 1.4956 L23: -0.4339 REMARK 3 S TENSOR REMARK 3 S11: -0.0654 S12: -0.2232 S13: 0.0655 REMARK 3 S21: 0.1342 S22: 0.0338 S23: -0.0525 REMARK 3 S31: -0.0202 S32: -0.1658 S33: 0.0317 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {A|139 - 168} REMARK 3 ORIGIN FOR THE GROUP (A): 12.6406 67.4082 27.1878 REMARK 3 T TENSOR REMARK 3 T11: -0.0002 T22: -0.0548 REMARK 3 T33: -0.0569 T12: 0.0006 REMARK 3 T13: -0.0036 T23: 0.0265 REMARK 3 L TENSOR REMARK 3 L11: 0.6326 L22: 3.2256 REMARK 3 L33: 0.5789 L12: -0.7974 REMARK 3 L13: 0.6988 L23: -0.4218 REMARK 3 S TENSOR REMARK 3 S11: -0.0266 S12: -0.0500 S13: -0.0670 REMARK 3 S21: 0.3694 S22: -0.0135 S23: -0.0440 REMARK 3 S31: 0.0526 S32: -0.0723 S33: 0.0401 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: {A|169 - 229} REMARK 3 ORIGIN FOR THE GROUP (A): 7.7207 59.4259 15.1863 REMARK 3 T TENSOR REMARK 3 T11: 0.0125 T22: -0.0370 REMARK 3 T33: 0.0034 T12: -0.0230 REMARK 3 T13: -0.0074 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 1.2007 L22: 1.7519 REMARK 3 L33: 1.4446 L12: -0.0976 REMARK 3 L13: -0.0993 L23: -0.1371 REMARK 3 S TENSOR REMARK 3 S11: -0.0079 S12: 0.0520 S13: -0.1701 REMARK 3 S21: -0.0241 S22: 0.0868 S23: 0.0996 REMARK 3 S31: 0.2628 S32: -0.1268 S33: -0.0788 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: {A|230 - 260} REMARK 3 ORIGIN FOR THE GROUP (A): 5.9765 72.7882 13.0901 REMARK 3 T TENSOR REMARK 3 T11: -0.0840 T22: -0.0446 REMARK 3 T33: -0.0496 T12: -0.0193 REMARK 3 T13: -0.0016 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 0.8251 L22: 0.0000 REMARK 3 L33: 0.7638 L12: -0.0944 REMARK 3 L13: 0.1120 L23: -0.1093 REMARK 3 S TENSOR REMARK 3 S11: -0.0475 S12: 0.0116 S13: -0.1436 REMARK 3 S21: 0.0075 S22: 0.0685 S23: 0.1122 REMARK 3 S31: 0.0974 S32: -0.0392 S33: -0.0210 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: {A|261 - 290} REMARK 3 ORIGIN FOR THE GROUP (A): 11.3903 98.0010 11.6312 REMARK 3 T TENSOR REMARK 3 T11: 0.0370 T22: -0.0382 REMARK 3 T33: 0.0746 T12: -0.0072 REMARK 3 T13: -0.0591 T23: 0.0218 REMARK 3 L TENSOR REMARK 3 L11: 4.8689 L22: 0.7398 REMARK 3 L33: 0.9166 L12: -0.7334 REMARK 3 L13: -0.3010 L23: 0.1276 REMARK 3 S TENSOR REMARK 3 S11: -0.2143 S12: 0.0346 S13: 0.5442 REMARK 3 S21: -0.1045 S22: 0.1207 S23: -0.2173 REMARK 3 S31: -0.1922 S32: 0.0303 S33: 0.0936 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6H1H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1200010894. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46420 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.540 REMARK 200 RESOLUTION RANGE LOW (A) : 42.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 1.36700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5JCT REMARK 200 REMARK 200 REMARK: NEEDLE-SHAPED CRYSTAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 MICROLITER OF PROTEIN 50 MG/ML AND 1 REMARK 280 MICROLITER OF RESERVOIR SOLUTION CONTAINING 0.1 M HEPES (PH 7.5), REMARK 280 8 % ETHYLENE GLYCOL, 20 % (W/V) PEG 8,000, PLACED OVER 200 REMARK 280 MICROLITERS OF RESERVOIR SOLUTION, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.15000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.84050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.70400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.84050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.15000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.70400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 3 N CA CB OG REMARK 470 LYS A 6 NZ REMARK 470 ARG A 14 NH1 REMARK 470 LYS A 34 CE NZ REMARK 470 ASN A 35 CG OD1 ND2 REMARK 470 LYS A 46 CE NZ REMARK 470 GLU A 109 CG CD OE1 OE2 REMARK 470 LYS A 135 CE NZ REMARK 470 GLU A 137 CD OE1 OE2 REMARK 470 LYS A 160 NZ REMARK 470 LYS A 181 CE NZ REMARK 470 LYS A 188 CD CE NZ REMARK 470 ASP A 207 OD1 OD2 REMARK 470 GLU A 222 OE1 OE2 REMARK 470 GLU A 262 CG CD OE1 OE2 REMARK 470 ARG A 272 CD NE CZ NH1 NH2 REMARK 470 LYS A 275 CD CE NZ REMARK 470 LYS A 282 CD CE NZ REMARK 470 LYS A 285 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 27 -106.82 -97.81 REMARK 500 LEU A 36 50.40 -111.40 REMARK 500 ASP A 55 112.90 -31.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 749 DISTANCE = 6.11 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 301 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 56 NE2 REMARK 620 2 HIS A 58 NE2 94.1 REMARK 620 3 HIS A 101 NE2 91.2 94.8 REMARK 620 4 GLU A 103 OE2 86.8 176.2 88.8 REMARK 620 5 HOH A 485 O 171.7 93.6 91.2 85.3 REMARK 620 6 HOH A 505 O 89.2 87.9 177.2 88.5 88.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FJE A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 307 DBREF 6H1H A 1 290 UNP O00625 PIR_HUMAN 1 290 SEQADV 6H1H GLY A -2 UNP O00625 EXPRESSION TAG SEQADV 6H1H SER A -1 UNP O00625 EXPRESSION TAG SEQADV 6H1H HIS A 0 UNP O00625 EXPRESSION TAG SEQRES 1 A 293 GLY SER HIS MET GLY SER SER LYS LYS VAL THR LEU SER SEQRES 2 A 293 VAL LEU SER ARG GLU GLN SER GLU GLY VAL GLY ALA ARG SEQRES 3 A 293 VAL ARG ARG SER ILE GLY ARG PRO GLU LEU LYS ASN LEU SEQRES 4 A 293 ASP PRO PHE LEU LEU PHE ASP GLU PHE LYS GLY GLY ARG SEQRES 5 A 293 PRO GLY GLY PHE PRO ASP HIS PRO HIS ARG GLY PHE GLU SEQRES 6 A 293 THR VAL SER TYR LEU LEU GLU GLY GLY SER MET ALA HIS SEQRES 7 A 293 GLU ASP PHE CYS GLY HIS THR GLY LYS MET ASN PRO GLY SEQRES 8 A 293 ASP LEU GLN TRP MET THR ALA GLY ARG GLY ILE LEU HIS SEQRES 9 A 293 ALA GLU MET PRO CYS SER GLU GLU PRO ALA HIS GLY LEU SEQRES 10 A 293 GLN LEU TRP VAL ASN LEU ARG SER SER GLU LYS MET VAL SEQRES 11 A 293 GLU PRO GLN TYR GLN GLU LEU LYS SER GLU GLU ILE PRO SEQRES 12 A 293 LYS PRO SER LYS ASP GLY VAL THR VAL ALA VAL ILE SER SEQRES 13 A 293 GLY GLU ALA LEU GLY ILE LYS SER LYS VAL TYR THR ARG SEQRES 14 A 293 THR PRO THR LEU TYR LEU ASP PHE LYS LEU ASP PRO GLY SEQRES 15 A 293 ALA LYS HIS SER GLN PRO ILE PRO LYS GLY TRP THR SER SEQRES 16 A 293 PHE ILE TYR THR ILE SER GLY ASP VAL TYR ILE GLY PRO SEQRES 17 A 293 ASP ASP ALA GLN GLN LYS ILE GLU PRO HIS HIS THR ALA SEQRES 18 A 293 VAL LEU GLY GLU GLY ASP SER VAL GLN VAL GLU ASN LYS SEQRES 19 A 293 ASP PRO LYS ARG SER HIS PHE VAL LEU ILE ALA GLY GLU SEQRES 20 A 293 PRO LEU ARG GLU PRO VAL ILE GLN HIS GLY PRO PHE VAL SEQRES 21 A 293 MET ASN THR ASN GLU GLU ILE SER GLN ALA ILE LEU ASP SEQRES 22 A 293 PHE ARG ASN ALA LYS ASN GLY PHE GLU ARG ALA LYS THR SEQRES 23 A 293 TRP LYS SER LYS ILE GLY ASN HET FE A 301 1 HET FJE A 302 42 HET GOL A 303 6 HET GOL A 304 6 HET GOL A 305 6 HET EDO A 306 4 HET EDO A 307 4 HETNAM FE FE (III) ION HETNAM FJE [3-AZANYL-2,6-BIS(FLUORANYL)PHENYL]-(5-CHLORANYL-1~{H}- HETNAM 2 FJE PYRROLO[2,3-B]PYRIDIN-3-YL)METHANONE HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 FE FE 3+ FORMUL 3 FJE C14 H8 CL F2 N3 O FORMUL 4 GOL 3(C3 H8 O3) FORMUL 7 EDO 2(C2 H6 O2) FORMUL 9 HOH *349(H2 O) HELIX 1 AA1 ARG A 121 LYS A 125 5 5 HELIX 2 AA2 LYS A 135 ILE A 139 5 5 HELIX 3 AA3 THR A 260 ALA A 274 1 15 HELIX 4 AA4 PHE A 278 LYS A 282 5 5 SHEET 1 AA1 7 VAL A 7 LEU A 12 0 SHEET 2 AA1 7 HIS A 216 LEU A 220 -1 O VAL A 219 N LEU A 9 SHEET 3 AA1 7 THR A 191 SER A 198 -1 N ILE A 194 O ALA A 218 SHEET 4 AA1 7 SER A 236 GLY A 243 -1 O ILE A 241 N PHE A 193 SHEET 5 AA1 7 THR A 169 LEU A 176 -1 N LEU A 170 O ALA A 242 SHEET 6 AA1 7 VAL A 147 SER A 153 -1 N ALA A 150 O ASP A 173 SHEET 7 AA1 7 SER A 143 LYS A 144 -1 N LYS A 144 O VAL A 147 SHEET 1 AA2 7 GLU A 15 GLU A 18 0 SHEET 2 AA2 7 ALA A 22 ARG A 26 -1 O VAL A 24 N GLN A 16 SHEET 3 AA2 7 PHE A 39 GLY A 47 -1 O LYS A 46 N ARG A 23 SHEET 4 AA2 7 ALA A 111 ASN A 119 -1 O TRP A 117 N LEU A 40 SHEET 5 AA2 7 PHE A 61 LEU A 67 -1 N TYR A 66 O LEU A 114 SHEET 6 AA2 7 LEU A 90 THR A 94 -1 O MET A 93 N THR A 63 SHEET 7 AA2 7 GLN A 130 LEU A 134 -1 O GLN A 132 N TRP A 92 SHEET 1 AA3 4 PHE A 53 HIS A 58 0 SHEET 2 AA3 4 ILE A 99 PRO A 105 -1 O GLU A 103 N PHE A 53 SHEET 3 AA3 4 MET A 73 ASP A 77 -1 N ALA A 74 O MET A 104 SHEET 4 AA3 4 THR A 82 MET A 85 -1 O MET A 85 N MET A 73 SHEET 1 AA4 2 GLU A 155 ALA A 156 0 SHEET 2 AA4 2 ILE A 159 LYS A 160 -1 O ILE A 159 N ALA A 156 SHEET 1 AA5 4 LYS A 181 PRO A 185 0 SHEET 2 AA5 4 SER A 225 GLU A 229 -1 O VAL A 226 N GLN A 184 SHEET 3 AA5 4 VAL A 201 ILE A 203 -1 N TYR A 202 O GLU A 229 SHEET 4 AA5 4 GLN A 210 ILE A 212 -1 O ILE A 212 N VAL A 201 SHEET 1 AA6 2 ILE A 251 HIS A 253 0 SHEET 2 AA6 2 PHE A 256 MET A 258 -1 O PHE A 256 N HIS A 253 LINK NE2 HIS A 56 FE FE A 301 1555 1555 2.20 LINK NE2 HIS A 58 FE FE A 301 1555 1555 2.16 LINK NE2 HIS A 101 FE FE A 301 1555 1555 2.20 LINK OE2 GLU A 103 FE FE A 301 1555 1555 2.21 LINK FE FE A 301 O HOH A 485 1555 1555 2.23 LINK FE FE A 301 O HOH A 505 1555 1555 2.19 CISPEP 1 ASP A 37 PRO A 38 0 13.00 CISPEP 2 ARG A 49 PRO A 50 0 4.20 SITE 1 AC1 6 HIS A 56 HIS A 58 HIS A 101 GLU A 103 SITE 2 AC1 6 HOH A 485 HOH A 505 SITE 1 AC2 17 GLU A 18 GLY A 19 ASP A 43 PHE A 45 SITE 2 AC2 17 PHE A 53 HIS A 56 HIS A 58 GLU A 103 SITE 3 AC2 17 GLN A 115 TRP A 117 PRO A 255 EDO A 307 SITE 4 AC2 17 HOH A 401 HOH A 410 HOH A 427 HOH A 505 SITE 5 AC2 17 HOH A 556 SITE 1 AC3 6 GLY A 83 PRO A 249 HOH A 441 HOH A 456 SITE 2 AC3 6 HOH A 493 HOH A 566 SITE 1 AC4 6 GLU A 15 ARG A 23 ARG A 25 GLU A 44 SITE 2 AC4 6 HIS A 112 HOH A 570 SITE 1 AC5 4 PHE A 271 ARG A 272 ALA A 281 HOH A 622 SITE 1 AC6 4 GLY A 154 GLU A 155 HOH A 453 HOH A 537 SITE 1 AC7 4 LEU A 41 GLN A 252 FJE A 302 HOH A 413 CRYST1 42.300 67.408 107.681 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023641 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014835 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009287 0.00000