HEADER HYDROLASE 13-JUL-18 6H2C TITLE STRUCTURE OF BLAC FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO THE TRANS- TITLE 2 ENAMINE ADDUCT DERIVED FROM CLAVULANIC ACID. COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: BLAC, ERS027646_02769; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.TASSONI,N.S.PANNU,M.UBBINK REVDAT 3 17-JAN-24 6H2C 1 REMARK REVDAT 2 27-FEB-19 6H2C 1 JRNL REVDAT 1 23-JAN-19 6H2C 0 JRNL AUTH R.TASSONI,A.BLOK,N.S.PANNU,M.UBBINK JRNL TITL NEW CONFORMATIONS OF ACYLATION ADDUCTS OF INHIBITORS OF JRNL TITL 2 BETA-LACTAMASE FROM MYCOBACTERIUM TUBERCULOSIS. JRNL REF BIOCHEMISTRY V. 58 997 2019 JRNL REFN ISSN 1520-4995 JRNL PMID 30632739 JRNL DOI 10.1021/ACS.BIOCHEM.8B01085 REMARK 2 REMARK 2 RESOLUTION. 1.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 3 NUMBER OF REFLECTIONS : 32697 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1723 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.93 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2148 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.48 REMARK 3 BIN R VALUE (WORKING SET) : 0.3290 REMARK 3 BIN FREE R VALUE SET COUNT : 111 REMARK 3 BIN FREE R VALUE : 0.3250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4018 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 72 REMARK 3 SOLVENT ATOMS : 112 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.95000 REMARK 3 B22 (A**2) : 2.73000 REMARK 3 B33 (A**2) : -1.50000 REMARK 3 B12 (A**2) : 0.26000 REMARK 3 B13 (A**2) : -0.35000 REMARK 3 B23 (A**2) : 0.37000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.236 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.192 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.189 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.015 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.912 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.874 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4170 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3899 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5665 ; 1.660 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8980 ; 1.014 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 538 ; 6.185 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 176 ;37.399 ;23.182 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 620 ;14.555 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;20.152 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 651 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4720 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 858 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2150 ; 0.892 ; 1.432 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2145 ; 0.890 ; 1.429 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2680 ; 1.443 ; 2.137 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2681 ; 1.442 ; 2.138 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2020 ; 1.026 ; 1.553 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2018 ; 1.026 ; 1.553 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2983 ; 1.602 ; 2.278 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4570 ; 2.903 ;17.267 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4571 ; 2.902 ;17.274 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 28 295 B 28 295 17326 0.07 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6H2C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1200010937. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9677 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34426 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.930 REMARK 200 RESOLUTION RANGE LOW (A) : 41.120 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 200 DATA REDUNDANCY : 2.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2GDN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, PH 5.0 25% W/V REMARK 280 PEG1500, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 296 REMARK 465 HIS A 297 REMARK 465 HIS A 298 REMARK 465 HIS A 299 REMARK 465 HIS A 300 REMARK 465 HIS A 301 REMARK 465 HIS B 296 REMARK 465 HIS B 297 REMARK 465 HIS B 298 REMARK 465 HIS B 299 REMARK 465 HIS B 300 REMARK 465 HIS B 301 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 295 CG CD OE1 OE2 REMARK 470 GLU B 295 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 70 OAH ISS A 401 2.00 REMARK 500 OG SER B 70 OAH ISS B 401 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 65 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 65 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 244 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 244 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG B 65 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 65 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 69 -145.29 46.63 REMARK 500 ARG A 222 -119.76 -117.39 REMARK 500 CYS B 69 -146.07 46.58 REMARK 500 ARG B 222 -117.85 -118.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 15P B 403 REMARK 610 15P B 404 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ISS A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 15P B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 15P B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CO2 B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ISS B 401 and SER B REMARK 800 70 DBREF1 6H2C A 29 293 UNP A0A0T9EA39_MYCTX DBREF2 6H2C A A0A0T9EA39 6 270 DBREF1 6H2C B 29 293 UNP A0A0T9EA39_MYCTX DBREF2 6H2C B A0A0T9EA39 6 270 SEQADV 6H2C MET A 28 UNP A0A0T9EA3 INITIATING METHIONINE SEQADV 6H2C LEU A 294 UNP A0A0T9EA3 EXPRESSION TAG SEQADV 6H2C GLU A 295 UNP A0A0T9EA3 EXPRESSION TAG SEQADV 6H2C HIS A 296 UNP A0A0T9EA3 EXPRESSION TAG SEQADV 6H2C HIS A 297 UNP A0A0T9EA3 EXPRESSION TAG SEQADV 6H2C HIS A 298 UNP A0A0T9EA3 EXPRESSION TAG SEQADV 6H2C HIS A 299 UNP A0A0T9EA3 EXPRESSION TAG SEQADV 6H2C HIS A 300 UNP A0A0T9EA3 EXPRESSION TAG SEQADV 6H2C HIS A 301 UNP A0A0T9EA3 EXPRESSION TAG SEQADV 6H2C MET B 28 UNP A0A0T9EA3 INITIATING METHIONINE SEQADV 6H2C LEU B 294 UNP A0A0T9EA3 EXPRESSION TAG SEQADV 6H2C GLU B 295 UNP A0A0T9EA3 EXPRESSION TAG SEQADV 6H2C HIS B 296 UNP A0A0T9EA3 EXPRESSION TAG SEQADV 6H2C HIS B 297 UNP A0A0T9EA3 EXPRESSION TAG SEQADV 6H2C HIS B 298 UNP A0A0T9EA3 EXPRESSION TAG SEQADV 6H2C HIS B 299 UNP A0A0T9EA3 EXPRESSION TAG SEQADV 6H2C HIS B 300 UNP A0A0T9EA3 EXPRESSION TAG SEQADV 6H2C HIS B 301 UNP A0A0T9EA3 EXPRESSION TAG SEQRES 1 A 274 MET ASP LEU ALA ASP ARG PHE ALA GLU LEU GLU ARG ARG SEQRES 2 A 274 TYR ASP ALA ARG LEU GLY VAL TYR VAL PRO ALA THR GLY SEQRES 3 A 274 THR THR ALA ALA ILE GLU TYR ARG ALA ASP GLU ARG PHE SEQRES 4 A 274 ALA PHE CYS SER THR PHE LYS ALA PRO LEU VAL ALA ALA SEQRES 5 A 274 VAL LEU HIS GLN ASN PRO LEU THR HIS LEU ASP LYS LEU SEQRES 6 A 274 ILE THR TYR THR SER ASP ASP ILE ARG SER ILE SER PRO SEQRES 7 A 274 VAL ALA GLN GLN HIS VAL GLN THR GLY MET THR ILE GLY SEQRES 8 A 274 GLN LEU CYS ASP ALA ALA ILE ARG TYR SER ASP GLY THR SEQRES 9 A 274 ALA ALA ASN LEU LEU LEU ALA ASP LEU GLY GLY PRO GLY SEQRES 10 A 274 GLY GLY THR ALA ALA PHE THR GLY TYR LEU ARG SER LEU SEQRES 11 A 274 GLY ASP THR VAL SER ARG LEU ASP ALA GLU GLU PRO GLU SEQRES 12 A 274 LEU ASN ARG ASP PRO PRO GLY ASP GLU ARG ASP THR THR SEQRES 13 A 274 THR PRO HIS ALA ILE ALA LEU VAL LEU GLN GLN LEU VAL SEQRES 14 A 274 LEU GLY ASN ALA LEU PRO PRO ASP LYS ARG ALA LEU LEU SEQRES 15 A 274 THR ASP TRP MET ALA ARG ASN THR THR GLY ALA LYS ARG SEQRES 16 A 274 ILE ARG ALA GLY PHE PRO ALA ASP TRP LYS VAL ILE ASP SEQRES 17 A 274 LYS THR GLY THR GLY ASP TYR GLY ARG ALA ASN ASP ILE SEQRES 18 A 274 ALA VAL VAL TRP SER PRO THR GLY VAL PRO TYR VAL VAL SEQRES 19 A 274 ALA VAL MET SER ASP ARG ALA GLY GLY GLY TYR ASP ALA SEQRES 20 A 274 GLU PRO ARG GLU ALA LEU LEU ALA GLU ALA ALA THR CYS SEQRES 21 A 274 VAL ALA GLY VAL LEU ALA LEU GLU HIS HIS HIS HIS HIS SEQRES 22 A 274 HIS SEQRES 1 B 274 MET ASP LEU ALA ASP ARG PHE ALA GLU LEU GLU ARG ARG SEQRES 2 B 274 TYR ASP ALA ARG LEU GLY VAL TYR VAL PRO ALA THR GLY SEQRES 3 B 274 THR THR ALA ALA ILE GLU TYR ARG ALA ASP GLU ARG PHE SEQRES 4 B 274 ALA PHE CYS SER THR PHE LYS ALA PRO LEU VAL ALA ALA SEQRES 5 B 274 VAL LEU HIS GLN ASN PRO LEU THR HIS LEU ASP LYS LEU SEQRES 6 B 274 ILE THR TYR THR SER ASP ASP ILE ARG SER ILE SER PRO SEQRES 7 B 274 VAL ALA GLN GLN HIS VAL GLN THR GLY MET THR ILE GLY SEQRES 8 B 274 GLN LEU CYS ASP ALA ALA ILE ARG TYR SER ASP GLY THR SEQRES 9 B 274 ALA ALA ASN LEU LEU LEU ALA ASP LEU GLY GLY PRO GLY SEQRES 10 B 274 GLY GLY THR ALA ALA PHE THR GLY TYR LEU ARG SER LEU SEQRES 11 B 274 GLY ASP THR VAL SER ARG LEU ASP ALA GLU GLU PRO GLU SEQRES 12 B 274 LEU ASN ARG ASP PRO PRO GLY ASP GLU ARG ASP THR THR SEQRES 13 B 274 THR PRO HIS ALA ILE ALA LEU VAL LEU GLN GLN LEU VAL SEQRES 14 B 274 LEU GLY ASN ALA LEU PRO PRO ASP LYS ARG ALA LEU LEU SEQRES 15 B 274 THR ASP TRP MET ALA ARG ASN THR THR GLY ALA LYS ARG SEQRES 16 B 274 ILE ARG ALA GLY PHE PRO ALA ASP TRP LYS VAL ILE ASP SEQRES 17 B 274 LYS THR GLY THR GLY ASP TYR GLY ARG ALA ASN ASP ILE SEQRES 18 B 274 ALA VAL VAL TRP SER PRO THR GLY VAL PRO TYR VAL VAL SEQRES 19 B 274 ALA VAL MET SER ASP ARG ALA GLY GLY GLY TYR ASP ALA SEQRES 20 B 274 GLU PRO ARG GLU ALA LEU LEU ALA GLU ALA ALA THR CYS SEQRES 21 B 274 VAL ALA GLY VAL LEU ALA LEU GLU HIS HIS HIS HIS HIS SEQRES 22 B 274 HIS HET ISS A 401 11 HET ACT A 402 4 HET ACT A 403 4 HET ACT A 404 4 HET GOL A 405 6 HET ISS B 401 11 HET ACT B 402 4 HET 15P B 403 8 HET 15P B 404 17 HET CO2 B 405 3 HETNAM ISS (2E)-3-[(4-HYDROXY-2-OXOBUTYL)AMINO]PROP-2-ENAL HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETNAM 15P POLYETHYLENE GLYCOL (N=34) HETNAM CO2 CARBON DIOXIDE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN 15P PEG 1500 FORMUL 3 ISS 2(C7 H11 N O3) FORMUL 4 ACT 4(C2 H3 O2 1-) FORMUL 7 GOL C3 H8 O3 FORMUL 10 15P 2(C69 H140 O35) FORMUL 12 CO2 C O2 FORMUL 13 HOH *112(H2 O) HELIX 1 AA1 ASP A 29 ASP A 42 1 14 HELIX 2 AA2 CYS A 69 THR A 71 5 3 HELIX 3 AA3 PHE A 72 ASN A 84 1 13 HELIX 4 AA4 PRO A 85 ASP A 90 5 6 HELIX 5 AA5 THR A 96 ILE A 100 5 5 HELIX 6 AA6 SER A 104 HIS A 110 1 7 HELIX 7 AA7 ILE A 117 TYR A 127 1 11 HELIX 8 AA8 ASP A 129 GLY A 142 1 14 HELIX 9 AA9 GLY A 145 LEU A 157 1 13 HELIX 10 AB1 PRO A 169 ARG A 173 5 5 HELIX 11 AB2 THR A 184 LEU A 197 1 14 HELIX 12 AB3 PRO A 202 ARG A 215 1 14 HELIX 13 AB4 ARG A 222 PHE A 227 5 6 HELIX 14 AB5 ARG A 267 GLY A 271 5 5 HELIX 15 AB6 ARG A 277 LEU A 294 1 18 HELIX 16 AB7 ASP B 29 ASP B 42 1 14 HELIX 17 AB8 CYS B 69 THR B 71 5 3 HELIX 18 AB9 PHE B 72 ASN B 84 1 13 HELIX 19 AC1 PRO B 85 ASP B 90 5 6 HELIX 20 AC2 THR B 96 ILE B 100 5 5 HELIX 21 AC3 VAL B 106 VAL B 111 5 6 HELIX 22 AC4 ILE B 117 TYR B 127 1 11 HELIX 23 AC5 ASP B 129 GLY B 142 1 14 HELIX 24 AC6 GLY B 145 LEU B 157 1 13 HELIX 25 AC7 PRO B 169 ARG B 173 5 5 HELIX 26 AC8 THR B 184 LEU B 197 1 14 HELIX 27 AC9 PRO B 202 ARG B 215 1 14 HELIX 28 AD1 ARG B 222 PHE B 227 1 6 HELIX 29 AD2 ARG B 267 GLY B 271 5 5 HELIX 30 AD3 ARG B 277 LEU B 294 1 18 SHEET 1 AA1 5 ILE A 58 TYR A 60 0 SHEET 2 AA1 5 ARG A 44 VAL A 49 -1 N VAL A 47 O TYR A 60 SHEET 3 AA1 5 PRO A 258 ASP A 266 -1 O ALA A 262 N TYR A 48 SHEET 4 AA1 5 ARG A 244 TRP A 252 -1 N VAL A 251 O TYR A 259 SHEET 5 AA1 5 LYS A 232 GLY A 240 -1 N GLY A 238 O ASN A 246 SHEET 1 AA2 2 PHE A 66 ALA A 67 0 SHEET 2 AA2 2 THR A 182 THR A 183 -1 O THR A 183 N PHE A 66 SHEET 1 AA3 2 LEU A 92 ILE A 93 0 SHEET 2 AA3 2 MET A 115 THR A 116 -1 O MET A 115 N ILE A 93 SHEET 1 AA4 5 ILE B 58 TYR B 60 0 SHEET 2 AA4 5 ARG B 44 VAL B 49 -1 N VAL B 47 O TYR B 60 SHEET 3 AA4 5 PRO B 258 ASP B 266 -1 O ALA B 262 N TYR B 48 SHEET 4 AA4 5 ARG B 244 TRP B 252 -1 N VAL B 251 O TYR B 259 SHEET 5 AA4 5 LYS B 232 GLY B 240 -1 N GLY B 238 O ASN B 246 SHEET 1 AA5 2 PHE B 66 ALA B 67 0 SHEET 2 AA5 2 THR B 182 THR B 183 -1 O THR B 183 N PHE B 66 SHEET 1 AA6 2 LEU B 92 ILE B 93 0 SHEET 2 AA6 2 MET B 115 THR B 116 -1 O MET B 115 N ILE B 93 LINK OG SER A 70 CAG ISS A 401 1555 1555 1.38 LINK OG SER B 70 CAG ISS B 401 1555 1555 1.37 CISPEP 1 GLU A 168 PRO A 169 0 6.22 CISPEP 2 GLU B 168 PRO B 169 0 6.80 SITE 1 AC1 7 SER A 70 ILE A 103 SER A 128 ASN A 172 SITE 2 AC1 7 GLY A 238 THR A 239 ACT A 402 SITE 1 AC2 6 SER A 128 ARG A 222 THR A 237 GLY A 238 SITE 2 AC2 6 THR A 239 ISS A 401 SITE 1 AC3 2 ALA A 31 GLU A 59 SITE 1 AC4 5 ARG A 267 GLY A 270 GLU A 275 ALA B 293 SITE 2 AC4 5 GLU B 295 SITE 1 AC5 5 ASP A 99 ARG A 101 ASN A 134 LEU A 135 SITE 2 AC5 5 HOH A 516 SITE 1 AC6 7 SER B 70 SER B 128 LYS B 236 THR B 237 SITE 2 AC6 7 GLY B 238 THR B 239 ISS B 401 SITE 1 AC7 9 LEU B 137 ALA B 138 GLY B 142 GLY B 144 SITE 2 AC7 9 GLY B 145 GLY B 146 THR B 147 ASP B 165 SITE 3 AC7 9 GLU B 167 SITE 1 AC8 7 ARG A 163 ARG A 180 HOH A 528 THR B 210 SITE 2 AC8 7 LYS B 232 TRP B 252 GLY B 256 SITE 1 AC9 4 GLU A 295 ARG B 267 ALA B 274 GLU B 275 SITE 1 AD1 15 PHE B 68 CYS B 69 THR B 71 PHE B 72 SITE 2 AD1 15 LYS B 73 SER B 128 GLU B 168 ASN B 172 SITE 3 AD1 15 LYS B 236 THR B 237 GLY B 238 THR B 239 SITE 4 AD1 15 GLY B 240 ACT B 402 HOH B 505 CRYST1 39.650 41.980 76.917 78.40 89.95 89.75 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025221 -0.000109 0.000000 0.00000 SCALE2 0.000000 0.023821 -0.004888 0.00000 SCALE3 0.000000 0.000000 0.013272 0.00000