HEADER LYASE 16-JUL-18 6H2S TITLE SULFOLOBUS SOLFATARICUS 2-KETO-3-DEOXYGLUCONATE ALDOLASE TITLE 2 T157V/D181Q/A198L VARIANT, PYRUVATE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6- COMPND 3 PHOSPHOGALACTONATE ALDOLASE; COMPND 4 CHAIN: A, B, C, D; COMPND 5 EC: 4.1.2.55; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; SOURCE 3 ORGANISM_TAXID: 2287; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ALDOLASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR S.J.CRENNELL,M.J.DANSON,S.ROYER REVDAT 4 16-OCT-24 6H2S 1 REMARK REVDAT 3 17-JAN-24 6H2S 1 REMARK REVDAT 2 15-NOV-23 6H2S 1 ATOM REVDAT 1 31-JUL-19 6H2S 0 JRNL AUTH S.J.CRENNELL,M.J.DANSON,S.ROYER JRNL TITL SULFOLOBUS SOLFATARICUS 2-KETO-3-DEOXYGLUCONATE ALDOLASE JRNL TITL 2 T157V/D181Q/A198L VARIANT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 60554 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.148 REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 3069 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.7966 - 6.0630 1.00 2827 149 0.1574 0.1914 REMARK 3 2 6.0630 - 4.8197 1.00 2761 152 0.1267 0.1544 REMARK 3 3 4.8197 - 4.2126 1.00 2770 144 0.1101 0.1371 REMARK 3 4 4.2126 - 3.8284 1.00 2736 154 0.1210 0.1670 REMARK 3 5 3.8284 - 3.5546 1.00 2770 141 0.1285 0.1726 REMARK 3 6 3.5546 - 3.3453 1.00 2754 137 0.1492 0.2083 REMARK 3 7 3.3453 - 3.1780 1.00 2721 160 0.1628 0.1971 REMARK 3 8 3.1780 - 3.0398 1.00 2767 145 0.1621 0.2132 REMARK 3 9 3.0398 - 2.9229 1.00 2710 171 0.1563 0.1965 REMARK 3 10 2.9229 - 2.8221 1.00 2713 164 0.1614 0.2647 REMARK 3 11 2.8221 - 2.7340 1.00 2747 132 0.1631 0.1942 REMARK 3 12 2.7340 - 2.6559 0.99 2706 147 0.1563 0.2228 REMARK 3 13 2.6559 - 2.5860 0.97 2638 140 0.1537 0.2226 REMARK 3 14 2.5860 - 2.5229 0.96 2652 126 0.1520 0.2275 REMARK 3 15 2.5229 - 2.4656 0.95 2548 151 0.1485 0.2293 REMARK 3 16 2.4656 - 2.4132 0.93 2563 116 0.1563 0.2126 REMARK 3 17 2.4132 - 2.3649 0.91 2475 143 0.1533 0.2278 REMARK 3 18 2.3649 - 2.3203 0.91 2479 139 0.1525 0.2264 REMARK 3 19 2.3203 - 2.2789 0.87 2377 138 0.1548 0.2165 REMARK 3 20 2.2789 - 2.2403 0.86 2358 105 0.1621 0.2495 REMARK 3 21 2.2403 - 2.2042 0.83 2299 116 0.1578 0.2547 REMARK 3 22 2.2042 - 2.1703 0.77 2114 99 0.1749 0.2360 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 9754 REMARK 3 ANGLE : 1.060 13206 REMARK 3 CHIRALITY : 0.054 1507 REMARK 3 PLANARITY : 0.007 1679 REMARK 3 DIHEDRAL : 13.654 5991 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6H2S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1200010925. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5406 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60596 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.170 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.22500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.590 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: 1W37 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES PH 6.1, 11% PEG4K, 4% REMARK 280 ISOPROPANOL, 0.1M PYRUVATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 43.50800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ3 LYS D 89 O HOH D 402 1.50 REMARK 500 HO3 GOL D 303 O HOH D 403 1.54 REMARK 500 HZ2 LYS D 60 O HOH D 406 1.54 REMARK 500 O PRO D 101 HZ2 LYS D 138 1.59 REMARK 500 O HOH B 514 O HOH B 529 1.82 REMARK 500 O HOH D 538 O HOH D 592 1.84 REMARK 500 OD1 ASN C 67 O HOH C 401 1.85 REMARK 500 O HOH B 539 O HOH B 550 1.87 REMARK 500 O HOH C 507 O HOH C 546 1.95 REMARK 500 O HOH C 443 O HOH C 551 1.95 REMARK 500 O HOH B 532 O HOH B 545 1.98 REMARK 500 OE2 GLU D 288 O HOH D 401 2.01 REMARK 500 O HOH D 534 O HOH D 545 2.02 REMARK 500 OE2 GLU A 270 O HOH A 401 2.11 REMARK 500 O HOH D 562 O HOH D 566 2.11 REMARK 500 OE1 GLU B 21 O HOH B 401 2.13 REMARK 500 O HOH A 427 O HOH A 478 2.13 REMARK 500 OE1 GLU B 270 NH1 ARG B 273 2.13 REMARK 500 OD1 ASP A 92 O HOH A 402 2.13 REMARK 500 O HOH D 552 O HOH D 601 2.14 REMARK 500 OE2 GLU B 231 O HOH B 402 2.14 REMARK 500 NZ LYS D 89 O HOH D 402 2.15 REMARK 500 OE2 GLU A 271 O HOH A 403 2.16 REMARK 500 OE2 GLU B 280 O HOH B 403 2.17 REMARK 500 O HOH D 522 O HOH D 563 2.19 REMARK 500 NH2 ARG D 283 OXT GLU D 294 2.19 REMARK 500 O HOH D 456 O HOH D 475 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 103 -65.66 65.33 REMARK 500 THR A 186 -31.29 -131.43 REMARK 500 ASN B 16 33.35 72.05 REMARK 500 TYR B 103 -62.08 71.41 REMARK 500 ILE B 158 145.14 -172.99 REMARK 500 THR B 190 16.24 -142.66 REMARK 500 ASN C 41 30.50 72.86 REMARK 500 TYR C 103 -59.27 70.05 REMARK 500 THR C 186 -35.29 -138.94 REMARK 500 ASN D 16 36.70 72.42 REMARK 500 TYR D 103 -61.01 68.45 REMARK 500 PRO D 126 150.41 -44.35 REMARK 500 ILE D 158 148.57 -174.92 REMARK 500 THR D 186 -30.59 -130.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 564 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH C 558 DISTANCE = 6.57 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PYR A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PYR B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PYR C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG C 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PYR D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 303 DBREF 6H2S A 2 294 UNP O54288 KDGA_SULSF 2 294 DBREF 6H2S B 2 294 UNP O54288 KDGA_SULSF 2 294 DBREF 6H2S C 2 294 UNP O54288 KDGA_SULSF 2 294 DBREF 6H2S D 2 294 UNP O54288 KDGA_SULSF 2 294 SEQADV 6H2S VAL A 157 UNP O54288 THR 157 ENGINEERED MUTATION SEQADV 6H2S GLN A 181 UNP O54288 ASP 181 ENGINEERED MUTATION SEQADV 6H2S LEU A 198 UNP O54288 ALA 198 ENGINEERED MUTATION SEQADV 6H2S VAL B 157 UNP O54288 THR 157 ENGINEERED MUTATION SEQADV 6H2S GLN B 181 UNP O54288 ASP 181 ENGINEERED MUTATION SEQADV 6H2S LEU B 198 UNP O54288 ALA 198 ENGINEERED MUTATION SEQADV 6H2S VAL C 157 UNP O54288 THR 157 ENGINEERED MUTATION SEQADV 6H2S GLN C 181 UNP O54288 ASP 181 ENGINEERED MUTATION SEQADV 6H2S LEU C 198 UNP O54288 ALA 198 ENGINEERED MUTATION SEQADV 6H2S VAL D 157 UNP O54288 THR 157 ENGINEERED MUTATION SEQADV 6H2S GLN D 181 UNP O54288 ASP 181 ENGINEERED MUTATION SEQADV 6H2S LEU D 198 UNP O54288 ALA 198 ENGINEERED MUTATION SEQRES 1 A 293 PRO GLU ILE ILE THR PRO ILE ILE THR PRO PHE THR LYS SEQRES 2 A 293 ASP ASN ARG ILE ASP LYS GLU LYS LEU LYS ILE HIS ALA SEQRES 3 A 293 GLU ASN LEU ILE ARG LYS GLY ILE ASP LYS LEU PHE VAL SEQRES 4 A 293 ASN GLY THR THR GLY LEU GLY PRO SER LEU SER PRO GLU SEQRES 5 A 293 GLU LYS LEU GLU ASN LEU LYS ALA VAL TYR ASP VAL THR SEQRES 6 A 293 ASN LYS ILE ILE PHE GLN VAL GLY GLY LEU ASN LEU ASP SEQRES 7 A 293 ASP ALA ILE ARG LEU ALA LYS LEU SER LYS ASP PHE ASP SEQRES 8 A 293 ILE VAL GLY ILE ALA SER TYR ALA PRO TYR TYR TYR PRO SEQRES 9 A 293 ARG MET SER GLU LYS HIS LEU VAL LYS TYR PHE LYS THR SEQRES 10 A 293 LEU CYS GLU VAL SER PRO HIS PRO VAL TYR LEU TYR ASN SEQRES 11 A 293 TYR PRO THR ALA THR GLY LYS ASP ILE ASP ALA LYS VAL SEQRES 12 A 293 ALA LYS GLU ILE GLY CYS PHE THR GLY VAL LYS ASP VAL SEQRES 13 A 293 ILE GLU ASN ILE ILE HIS THR LEU ASP TYR LYS ARG LEU SEQRES 14 A 293 ASN PRO ASN MET LEU VAL TYR SER GLY SER GLN MET LEU SEQRES 15 A 293 ILE ALA THR VAL ALA SER THR GLY LEU ASP GLY ASN VAL SEQRES 16 A 293 ALA LEU GLY SER ASN TYR LEU PRO GLU VAL THR VAL THR SEQRES 17 A 293 ILE LYS LYS LEU ALA MET GLU ARG LYS ILE ASP GLU ALA SEQRES 18 A 293 LEU LYS LEU GLN PHE LEU HIS ASP GLU VAL ILE GLU ALA SEQRES 19 A 293 SER ARG ILE PHE GLY SER LEU SER SER ASN TYR VAL LEU SEQRES 20 A 293 THR LYS TYR PHE GLN GLY TYR ASP LEU GLY TYR PRO ARG SEQRES 21 A 293 PRO PRO ILE PHE PRO LEU ASP ASP GLU GLU GLU ARG GLN SEQRES 22 A 293 LEU ILE LYS LYS VAL GLU GLY ILE ARG ALA LYS LEU VAL SEQRES 23 A 293 GLU LEU LYS ILE LEU LYS GLU SEQRES 1 B 293 PRO GLU ILE ILE THR PRO ILE ILE THR PRO PHE THR LYS SEQRES 2 B 293 ASP ASN ARG ILE ASP LYS GLU LYS LEU LYS ILE HIS ALA SEQRES 3 B 293 GLU ASN LEU ILE ARG LYS GLY ILE ASP LYS LEU PHE VAL SEQRES 4 B 293 ASN GLY THR THR GLY LEU GLY PRO SER LEU SER PRO GLU SEQRES 5 B 293 GLU LYS LEU GLU ASN LEU LYS ALA VAL TYR ASP VAL THR SEQRES 6 B 293 ASN LYS ILE ILE PHE GLN VAL GLY GLY LEU ASN LEU ASP SEQRES 7 B 293 ASP ALA ILE ARG LEU ALA LYS LEU SER LYS ASP PHE ASP SEQRES 8 B 293 ILE VAL GLY ILE ALA SER TYR ALA PRO TYR TYR TYR PRO SEQRES 9 B 293 ARG MET SER GLU LYS HIS LEU VAL LYS TYR PHE LYS THR SEQRES 10 B 293 LEU CYS GLU VAL SER PRO HIS PRO VAL TYR LEU TYR ASN SEQRES 11 B 293 TYR PRO THR ALA THR GLY LYS ASP ILE ASP ALA LYS VAL SEQRES 12 B 293 ALA LYS GLU ILE GLY CYS PHE THR GLY VAL LYS ASP VAL SEQRES 13 B 293 ILE GLU ASN ILE ILE HIS THR LEU ASP TYR LYS ARG LEU SEQRES 14 B 293 ASN PRO ASN MET LEU VAL TYR SER GLY SER GLN MET LEU SEQRES 15 B 293 ILE ALA THR VAL ALA SER THR GLY LEU ASP GLY ASN VAL SEQRES 16 B 293 ALA LEU GLY SER ASN TYR LEU PRO GLU VAL THR VAL THR SEQRES 17 B 293 ILE LYS LYS LEU ALA MET GLU ARG LYS ILE ASP GLU ALA SEQRES 18 B 293 LEU LYS LEU GLN PHE LEU HIS ASP GLU VAL ILE GLU ALA SEQRES 19 B 293 SER ARG ILE PHE GLY SER LEU SER SER ASN TYR VAL LEU SEQRES 20 B 293 THR LYS TYR PHE GLN GLY TYR ASP LEU GLY TYR PRO ARG SEQRES 21 B 293 PRO PRO ILE PHE PRO LEU ASP ASP GLU GLU GLU ARG GLN SEQRES 22 B 293 LEU ILE LYS LYS VAL GLU GLY ILE ARG ALA LYS LEU VAL SEQRES 23 B 293 GLU LEU LYS ILE LEU LYS GLU SEQRES 1 C 293 PRO GLU ILE ILE THR PRO ILE ILE THR PRO PHE THR LYS SEQRES 2 C 293 ASP ASN ARG ILE ASP LYS GLU LYS LEU LYS ILE HIS ALA SEQRES 3 C 293 GLU ASN LEU ILE ARG LYS GLY ILE ASP LYS LEU PHE VAL SEQRES 4 C 293 ASN GLY THR THR GLY LEU GLY PRO SER LEU SER PRO GLU SEQRES 5 C 293 GLU LYS LEU GLU ASN LEU LYS ALA VAL TYR ASP VAL THR SEQRES 6 C 293 ASN LYS ILE ILE PHE GLN VAL GLY GLY LEU ASN LEU ASP SEQRES 7 C 293 ASP ALA ILE ARG LEU ALA LYS LEU SER LYS ASP PHE ASP SEQRES 8 C 293 ILE VAL GLY ILE ALA SER TYR ALA PRO TYR TYR TYR PRO SEQRES 9 C 293 ARG MET SER GLU LYS HIS LEU VAL LYS TYR PHE LYS THR SEQRES 10 C 293 LEU CYS GLU VAL SER PRO HIS PRO VAL TYR LEU TYR ASN SEQRES 11 C 293 TYR PRO THR ALA THR GLY LYS ASP ILE ASP ALA LYS VAL SEQRES 12 C 293 ALA LYS GLU ILE GLY CYS PHE THR GLY VAL LYS ASP VAL SEQRES 13 C 293 ILE GLU ASN ILE ILE HIS THR LEU ASP TYR LYS ARG LEU SEQRES 14 C 293 ASN PRO ASN MET LEU VAL TYR SER GLY SER GLN MET LEU SEQRES 15 C 293 ILE ALA THR VAL ALA SER THR GLY LEU ASP GLY ASN VAL SEQRES 16 C 293 ALA LEU GLY SER ASN TYR LEU PRO GLU VAL THR VAL THR SEQRES 17 C 293 ILE LYS LYS LEU ALA MET GLU ARG LYS ILE ASP GLU ALA SEQRES 18 C 293 LEU LYS LEU GLN PHE LEU HIS ASP GLU VAL ILE GLU ALA SEQRES 19 C 293 SER ARG ILE PHE GLY SER LEU SER SER ASN TYR VAL LEU SEQRES 20 C 293 THR LYS TYR PHE GLN GLY TYR ASP LEU GLY TYR PRO ARG SEQRES 21 C 293 PRO PRO ILE PHE PRO LEU ASP ASP GLU GLU GLU ARG GLN SEQRES 22 C 293 LEU ILE LYS LYS VAL GLU GLY ILE ARG ALA LYS LEU VAL SEQRES 23 C 293 GLU LEU LYS ILE LEU LYS GLU SEQRES 1 D 293 PRO GLU ILE ILE THR PRO ILE ILE THR PRO PHE THR LYS SEQRES 2 D 293 ASP ASN ARG ILE ASP LYS GLU LYS LEU LYS ILE HIS ALA SEQRES 3 D 293 GLU ASN LEU ILE ARG LYS GLY ILE ASP LYS LEU PHE VAL SEQRES 4 D 293 ASN GLY THR THR GLY LEU GLY PRO SER LEU SER PRO GLU SEQRES 5 D 293 GLU LYS LEU GLU ASN LEU LYS ALA VAL TYR ASP VAL THR SEQRES 6 D 293 ASN LYS ILE ILE PHE GLN VAL GLY GLY LEU ASN LEU ASP SEQRES 7 D 293 ASP ALA ILE ARG LEU ALA LYS LEU SER LYS ASP PHE ASP SEQRES 8 D 293 ILE VAL GLY ILE ALA SER TYR ALA PRO TYR TYR TYR PRO SEQRES 9 D 293 ARG MET SER GLU LYS HIS LEU VAL LYS TYR PHE LYS THR SEQRES 10 D 293 LEU CYS GLU VAL SER PRO HIS PRO VAL TYR LEU TYR ASN SEQRES 11 D 293 TYR PRO THR ALA THR GLY LYS ASP ILE ASP ALA LYS VAL SEQRES 12 D 293 ALA LYS GLU ILE GLY CYS PHE THR GLY VAL LYS ASP VAL SEQRES 13 D 293 ILE GLU ASN ILE ILE HIS THR LEU ASP TYR LYS ARG LEU SEQRES 14 D 293 ASN PRO ASN MET LEU VAL TYR SER GLY SER GLN MET LEU SEQRES 15 D 293 ILE ALA THR VAL ALA SER THR GLY LEU ASP GLY ASN VAL SEQRES 16 D 293 ALA LEU GLY SER ASN TYR LEU PRO GLU VAL THR VAL THR SEQRES 17 D 293 ILE LYS LYS LEU ALA MET GLU ARG LYS ILE ASP GLU ALA SEQRES 18 D 293 LEU LYS LEU GLN PHE LEU HIS ASP GLU VAL ILE GLU ALA SEQRES 19 D 293 SER ARG ILE PHE GLY SER LEU SER SER ASN TYR VAL LEU SEQRES 20 D 293 THR LYS TYR PHE GLN GLY TYR ASP LEU GLY TYR PRO ARG SEQRES 21 D 293 PRO PRO ILE PHE PRO LEU ASP ASP GLU GLU GLU ARG GLN SEQRES 22 D 293 LEU ILE LYS LYS VAL GLU GLY ILE ARG ALA LYS LEU VAL SEQRES 23 D 293 GLU LEU LYS ILE LEU LYS GLU HET PYR A 301 9 HET GOL A 302 14 HET GOL A 303 14 HET PEG A 304 17 HET IPA A 305 12 HET PYR B 301 9 HET GOL B 302 14 HET GOL B 303 14 HET PYR C 301 9 HET GOL C 302 14 HET PEG C 303 17 HET PYR D 301 9 HET GOL D 302 14 HET GOL D 303 14 HETNAM PYR PYRUVIC ACID HETNAM GOL GLYCEROL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM IPA ISOPROPYL ALCOHOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN IPA 2-PROPANOL FORMUL 5 PYR 4(C3 H4 O3) FORMUL 6 GOL 7(C3 H8 O3) FORMUL 8 PEG 2(C4 H10 O3) FORMUL 9 IPA C3 H8 O FORMUL 19 HOH *731(H2 O) HELIX 1 AA1 ASP A 19 LYS A 33 1 15 HELIX 2 AA2 LEU A 46 LEU A 50 5 5 HELIX 3 AA3 SER A 51 ASP A 64 1 14 HELIX 4 AA4 ASN A 77 SER A 88 1 12 HELIX 5 AA5 LYS A 89 PHE A 91 5 3 HELIX 6 AA6 SER A 108 SER A 123 1 16 HELIX 7 AA7 TYR A 132 GLY A 137 1 6 HELIX 8 AA8 ASP A 141 GLY A 149 1 9 HELIX 9 AA9 ASN A 160 ASN A 171 1 12 HELIX 10 AB1 LEU A 198 TYR A 202 5 5 HELIX 11 AB2 LEU A 203 GLU A 216 1 14 HELIX 12 AB3 LYS A 218 ILE A 238 1 21 HELIX 13 AB4 GLY A 240 GLY A 254 1 15 HELIX 14 AB5 ASP A 268 LEU A 289 1 22 HELIX 15 AB6 ASP B 19 LYS B 33 1 15 HELIX 16 AB7 LEU B 46 LEU B 50 5 5 HELIX 17 AB8 SER B 51 THR B 66 1 16 HELIX 18 AB9 ASN B 77 SER B 88 1 12 HELIX 19 AC1 LYS B 89 PHE B 91 5 3 HELIX 20 AC2 SER B 108 SER B 123 1 16 HELIX 21 AC3 TYR B 132 GLY B 137 1 6 HELIX 22 AC4 ASP B 141 GLY B 149 1 9 HELIX 23 AC5 ASN B 160 ASN B 171 1 12 HELIX 24 AC6 MET B 182 VAL B 187 1 6 HELIX 25 AC7 LEU B 198 TYR B 202 5 5 HELIX 26 AC8 LEU B 203 GLU B 216 1 14 HELIX 27 AC9 LYS B 218 ARG B 237 1 20 HELIX 28 AD1 GLY B 240 GLY B 254 1 15 HELIX 29 AD2 ASP B 268 LEU B 289 1 22 HELIX 30 AD3 ASP C 19 LYS C 33 1 15 HELIX 31 AD4 LEU C 46 LEU C 50 5 5 HELIX 32 AD5 SER C 51 ASP C 64 1 14 HELIX 33 AD6 ASN C 77 SER C 88 1 12 HELIX 34 AD7 LYS C 89 PHE C 91 5 3 HELIX 35 AD8 SER C 108 SER C 123 1 16 HELIX 36 AD9 TYR C 132 GLY C 137 1 6 HELIX 37 AE1 ASP C 141 GLY C 149 1 9 HELIX 38 AE2 ASN C 160 ASN C 171 1 12 HELIX 39 AE3 MET C 182 THR C 186 5 5 HELIX 40 AE4 LEU C 198 TYR C 202 5 5 HELIX 41 AE5 LEU C 203 GLU C 216 1 14 HELIX 42 AE6 LYS C 218 ARG C 237 1 20 HELIX 43 AE7 GLY C 240 GLY C 254 1 15 HELIX 44 AE8 ASP C 268 LEU C 289 1 22 HELIX 45 AE9 ASP D 19 LYS D 33 1 15 HELIX 46 AF1 LEU D 46 LEU D 50 5 5 HELIX 47 AF2 SER D 51 ASP D 64 1 14 HELIX 48 AF3 ASN D 77 SER D 88 1 12 HELIX 49 AF4 LYS D 89 PHE D 91 5 3 HELIX 50 AF5 SER D 108 SER D 123 1 16 HELIX 51 AF6 TYR D 132 GLY D 137 1 6 HELIX 52 AF7 ASP D 141 GLY D 149 1 9 HELIX 53 AF8 ASN D 160 ASN D 171 1 12 HELIX 54 AF9 MET D 182 THR D 186 5 5 HELIX 55 AG1 LEU D 198 TYR D 202 5 5 HELIX 56 AG2 LEU D 203 ARG D 217 1 15 HELIX 57 AG3 LYS D 218 ILE D 238 1 21 HELIX 58 AG4 GLY D 240 GLY D 254 1 15 HELIX 59 AG5 ASP D 268 LEU D 289 1 22 SHEET 1 AA1 9 GLU A 3 PRO A 7 0 SHEET 2 AA1 9 LYS A 37 VAL A 40 1 O PHE A 39 N THR A 6 SHEET 3 AA1 9 ILE A 69 GLN A 72 1 O ILE A 70 N VAL A 40 SHEET 4 AA1 9 GLY A 95 TYR A 99 1 O GLY A 95 N PHE A 71 SHEET 5 AA1 9 VAL A 127 ASN A 131 1 O TYR A 128 N ILE A 96 SHEET 6 AA1 9 PHE A 151 ASP A 156 1 O LYS A 155 N LEU A 129 SHEET 7 AA1 9 LEU A 175 SER A 178 1 O TYR A 177 N ASP A 156 SHEET 8 AA1 9 GLY A 194 VAL A 196 1 O GLY A 194 N SER A 178 SHEET 9 AA1 9 GLU A 3 PRO A 7 1 N ILE A 5 O ASN A 195 SHEET 1 AA2 9 GLU B 3 PRO B 7 0 SHEET 2 AA2 9 LYS B 37 VAL B 40 1 O PHE B 39 N THR B 6 SHEET 3 AA2 9 ILE B 69 GLN B 72 1 O ILE B 70 N VAL B 40 SHEET 4 AA2 9 GLY B 95 TYR B 99 1 O GLY B 95 N PHE B 71 SHEET 5 AA2 9 VAL B 127 ASN B 131 1 O TYR B 128 N ILE B 96 SHEET 6 AA2 9 GLY B 153 ASP B 156 1 O LYS B 155 N LEU B 129 SHEET 7 AA2 9 LEU B 175 SER B 178 1 O TYR B 177 N ASP B 156 SHEET 8 AA2 9 GLY B 194 VAL B 196 1 O GLY B 194 N SER B 178 SHEET 9 AA2 9 GLU B 3 PRO B 7 1 N ILE B 5 O ASN B 195 SHEET 1 AA3 9 GLU C 3 PRO C 7 0 SHEET 2 AA3 9 LYS C 37 VAL C 40 1 O PHE C 39 N THR C 6 SHEET 3 AA3 9 ILE C 69 GLN C 72 1 O ILE C 70 N VAL C 40 SHEET 4 AA3 9 GLY C 95 TYR C 99 1 O GLY C 95 N PHE C 71 SHEET 5 AA3 9 VAL C 127 ASN C 131 1 O TYR C 128 N ILE C 96 SHEET 6 AA3 9 PHE C 151 ASP C 156 1 O GLY C 153 N LEU C 129 SHEET 7 AA3 9 LEU C 175 SER C 178 1 O TYR C 177 N ASP C 156 SHEET 8 AA3 9 GLY C 194 VAL C 196 1 O VAL C 196 N SER C 178 SHEET 9 AA3 9 GLU C 3 PRO C 7 1 N ILE C 5 O ASN C 195 SHEET 1 AA4 9 GLU D 3 PRO D 7 0 SHEET 2 AA4 9 LYS D 37 VAL D 40 1 O PHE D 39 N THR D 6 SHEET 3 AA4 9 ILE D 69 GLN D 72 1 O ILE D 70 N VAL D 40 SHEET 4 AA4 9 GLY D 95 TYR D 99 1 O GLY D 95 N PHE D 71 SHEET 5 AA4 9 VAL D 127 ASN D 131 1 O TYR D 128 N ILE D 96 SHEET 6 AA4 9 GLY D 153 ASP D 156 1 O LYS D 155 N LEU D 129 SHEET 7 AA4 9 LEU D 175 SER D 178 1 O TYR D 177 N VAL D 154 SHEET 8 AA4 9 GLY D 194 VAL D 196 1 O VAL D 196 N SER D 178 SHEET 9 AA4 9 GLU D 3 PRO D 7 1 N ILE D 5 O ASN D 195 SSBOND 1 CYS A 120 CYS A 150 1555 1555 2.04 SSBOND 2 CYS B 120 CYS B 150 1555 1555 2.03 SSBOND 3 CYS C 120 CYS C 150 1555 1555 2.04 SSBOND 4 CYS D 120 CYS D 150 1555 1555 2.06 CISPEP 1 PRO A 262 PRO A 263 0 9.36 CISPEP 2 PRO B 262 PRO B 263 0 16.91 CISPEP 3 PRO C 262 PRO C 263 0 9.37 CISPEP 4 PRO D 262 PRO D 263 0 12.22 SITE 1 AC1 6 PRO A 7 THR A 43 THR A 44 TYR A 130 SITE 2 AC1 6 VAL A 157 LEU A 198 SITE 1 AC2 9 GLY A 240 SER A 241 LEU A 242 SER A 243 SITE 2 AC2 9 ARG B 106 MET B 107 SER B 108 HIS B 111 SITE 3 AC2 9 HOH B 440 SITE 1 AC3 6 ASN A 67 LYS A 68 ASP A 92 ILE A 93 SITE 2 AC3 6 VAL A 94 HOH A 545 SITE 1 AC4 9 TYR A 103 TYR A 104 THR A 134 THR A 136 SITE 2 AC4 9 GLY A 137 LYS A 138 HOH A 439 THR B 134 SITE 3 AC4 9 ALA B 135 SITE 1 AC5 4 CYS A 120 SER A 123 HIS A 125 HOH A 433 SITE 1 AC6 6 PRO B 7 THR B 43 THR B 44 TYR B 130 SITE 2 AC6 6 VAL B 196 LEU B 198 SITE 1 AC7 7 SER A 108 HIS A 111 GLY B 240 SER B 241 SITE 2 AC7 7 LEU B 242 SER B 243 HOH B 455 SITE 1 AC8 6 LEU B 112 LYS B 138 ASP B 139 HOH B 405 SITE 2 AC8 6 HOH B 427 HOH B 514 SITE 1 AC9 6 PRO C 7 THR C 43 THR C 44 TYR C 130 SITE 2 AC9 6 VAL C 157 VAL C 196 SITE 1 AD1 8 GLY C 240 SER C 241 LEU C 242 SER C 243 SITE 2 AD1 8 MET D 107 SER D 108 HIS D 111 HOH D 461 SITE 1 AD2 10 TYR C 103 TYR C 104 PRO C 133 THR C 134 SITE 2 AD2 10 THR C 136 GLY C 137 LYS C 138 HOH C 435 SITE 3 AD2 10 THR D 134 ALA D 135 SITE 1 AD3 7 PRO D 7 THR D 43 THR D 44 TYR D 130 SITE 2 AD3 7 VAL D 157 VAL D 196 LEU D 198 SITE 1 AD4 7 ARG C 106 SER C 108 HIS C 111 GLY D 240 SITE 2 AD4 7 SER D 241 LEU D 242 SER D 243 SITE 1 AD5 4 TYR D 63 VAL D 65 ASN D 67 HOH D 403 CRYST1 76.560 87.016 92.000 90.00 95.74 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013062 0.000000 0.001313 0.00000 SCALE2 0.000000 0.011492 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010924 0.00000