HEADER IMMUNE SYSTEM 17-JUL-18 6H2Y TITLE HUMAN FAB 1E6 BOUND TO FHBP VARIANT 3 FROM NEISSERIA MENINGITIDIS TITLE 2 SEROGROUP B COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIPOPROTEIN GNA1870; COMPND 3 CHAIN: D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: LIGHT CHAIN; COMPND 11 CHAIN: L; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA MENINGITIDIS; SOURCE 3 ORGANISM_TAXID: 487; SOURCE 4 GENE: GNA1870; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 12 MOL_ID: 3; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS FHBP, HUMAN FAB, NEISSERIA, ANTIGEN-ANTIBODY COMPLEX, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR D.VEGGI,F.BIANCHI,R.COZZI,E.MALITO,M.J.BOTTOMLEY REVDAT 2 26-FEB-20 6H2Y 1 JRNL REVDAT 1 14-AUG-19 6H2Y 0 JRNL AUTH F.BIANCHI,D.VEGGI,L.SANTINI,F.BURICCHI,E.BARTOLINI, JRNL AUTH 2 P.LO SURDO,M.MARTINELLI,O.FINCO,V.MASIGNANI,M.J.BOTTOMLEY, JRNL AUTH 3 D.MAIONE,R.COZZI JRNL TITL COCRYSTAL STRUCTURE OF MENINGOCOCCAL FACTOR H BINDING JRNL TITL 2 PROTEIN VARIANT 3 REVEALS A NEW CROSSPROTECTIVE EPITOPE JRNL TITL 3 RECOGNIZED BY HUMAN MAB 1E6. JRNL REF FASEB J. V. 33 12099 2019 JRNL REFN ESSN 1530-6860 JRNL PMID 31442074 JRNL DOI 10.1096/FJ.201900374R REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: 000) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 63.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 23182 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 1139 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 0.0000 - 5.2913 0.93 2837 158 0.1862 0.2186 REMARK 3 2 5.2913 - 4.2001 0.97 2800 135 0.1629 0.2352 REMARK 3 3 4.2001 - 3.6692 0.97 2736 153 0.1879 0.2780 REMARK 3 4 3.6692 - 3.3338 0.97 2740 144 0.2165 0.2856 REMARK 3 5 3.3338 - 3.0948 0.97 2709 137 0.0000 0.3488 REMARK 3 6 3.0948 - 2.9124 0.98 2738 130 0.2405 0.3219 REMARK 3 7 2.9124 - 2.7665 0.98 2749 152 0.0000 0.3036 REMARK 3 8 2.7665 - 2.6500 0.98 2734 130 0.0000 0.3367 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5152 REMARK 3 ANGLE : 1.046 6962 REMARK 3 CHIRALITY : 0.053 790 REMARK 3 PLANARITY : 0.006 888 REMARK 3 DIHEDRAL : 7.245 3412 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6H2Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1200010841. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.983 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23201 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 65.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.15900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.56500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MOLECULAR DIMENSIONS MORPHEUS HT-96 REMARK 280 SCREEN, WELL D9, PH 8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.63950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 139.41400 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.63950 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 139.41400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET D 0 REMARK 465 GLY D 1 REMARK 465 PRO D 2 REMARK 465 ASP D 3 REMARK 465 SER D 4 REMARK 465 ASP D 5 REMARK 465 ARG D 6 REMARK 465 LEU D 7 REMARK 465 GLN D 8 REMARK 465 GLN D 9 REMARK 465 ARG D 10 REMARK 465 ARG D 11 REMARK 465 VAL D 12 REMARK 465 ALA D 13 REMARK 465 ALA D 14 REMARK 465 ASP D 15 REMARK 465 ILE D 16 REMARK 465 GLY D 17 REMARK 465 THR D 18 REMARK 465 GLY D 19 REMARK 465 VAL D 91 REMARK 465 ASP D 92 REMARK 465 GLY D 93 REMARK 465 GLY D 153 REMARK 465 GLY D 154 REMARK 465 LYS D 155 REMARK 465 GLN D 195 REMARK 465 ASN D 196 REMARK 465 GLY D 221 REMARK 465 SER D 222 REMARK 465 GLU D 223 REMARK 465 GLU D 224 REMARK 465 LEU D 263 REMARK 465 ALA D 264 REMARK 465 ALA D 265 REMARK 465 ALA D 266 REMARK 465 LEU D 267 REMARK 465 GLU D 268 REMARK 465 HIS D 269 REMARK 465 HIS D 270 REMARK 465 HIS D 271 REMARK 465 HIS D 272 REMARK 465 HIS D 273 REMARK 465 HIS D 274 REMARK 465 THR H 137 REMARK 465 SER H 138 REMARK 465 GLY H 139 REMARK 465 ASP H 223 REMARK 465 LYS H 224 REMARK 465 VAL L -1 REMARK 465 VAL L 0 REMARK 465 CYS L 213 REMARK 465 SER L 214 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS D 31 CG CD CE NZ REMARK 470 LYS D 59 CD CE NZ REMARK 470 LYS D 66 CG CD CE NZ REMARK 470 GLN D 94 N CB CG CD OE1 NE2 REMARK 470 ASP D 128 CG OD1 OD2 REMARK 470 GLU D 157 CG CD OE1 OE2 REMARK 470 HIS D 173 CD2 REMARK 470 LYS D 181 CG CD CE NZ REMARK 470 LYS D 209 CE NZ REMARK 470 LYS L 158 CE NZ REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 THR D 25 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP D 125 O LYS H 74 1655 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA D 26 145.04 -175.41 REMARK 500 LYS D 31 34.17 -76.14 REMARK 500 ILE D 89 -155.58 -137.05 REMARK 500 THR D 95 142.61 -175.99 REMARK 500 GLN D 108 -165.05 -111.15 REMARK 500 ASP D 125 -78.28 -93.04 REMARK 500 GLN D 133 119.49 -167.76 REMARK 500 LEU D 141 102.19 -173.20 REMARK 500 SER D 164 -168.26 -122.88 REMARK 500 ASP D 167 65.90 -160.62 REMARK 500 LEU D 193 -63.28 -143.06 REMARK 500 LYS D 205 -159.08 -113.43 REMARK 500 ALA D 241 136.06 -176.96 REMARK 500 PRO H 33 101.93 -59.17 REMARK 500 GLN H 43 -159.12 -111.78 REMARK 500 LYS H 74 0.57 -63.80 REMARK 500 SER H 134 -11.82 74.98 REMARK 500 LYS H 135 -62.72 -28.30 REMARK 500 THR H 141 -169.35 -108.56 REMARK 500 ASN H 210 67.78 38.12 REMARK 500 SER H 221 -71.75 -57.79 REMARK 500 ASN L 25 108.79 -55.69 REMARK 500 ASP L 50 -59.54 67.09 REMARK 500 SER L 51 53.20 -152.51 REMARK 500 PRO L 54 -164.60 -76.46 REMARK 500 ALA L 67 -117.80 53.94 REMARK 500 ARG L 76 76.23 49.28 REMARK 500 ASP L 140 41.45 73.72 REMARK 500 ASP L 153 -125.54 59.32 REMARK 500 GLN L 169 -156.66 -92.48 REMARK 500 ASN L 172 -5.23 84.20 REMARK 500 SER L 189 36.82 -98.24 REMARK 500 THR L 211 72.96 -66.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH H 427 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH H 428 DISTANCE = 6.29 ANGSTROMS REMARK 525 HOH L 430 DISTANCE = 9.46 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO H 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO H 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO H 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO H 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO H 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO H 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO H 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO H 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG H 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO L 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO L 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO L 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO L 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P33 L 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 L 306 DBREF 6H2Y D 12 261 UNP Q19KF7 Q19KF7_NEIME 32 281 DBREF 6H2Y H 1 224 PDB 6H2Y 6H2Y 1 224 DBREF 6H2Y L -1 214 PDB 6H2Y 6H2Y -1 214 SEQADV 6H2Y MET D 0 UNP Q19KF7 INITIATING METHIONINE SEQADV 6H2Y GLY D 1 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y PRO D 2 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y ASP D 3 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y SER D 4 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y ASP D 5 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y ARG D 6 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y LEU D 7 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y GLN D 8 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y GLN D 9 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y ARG D 10 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y ARG D 11 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y LYS D 262 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y LEU D 263 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y ALA D 264 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y ALA D 265 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y ALA D 266 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y LEU D 267 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y GLU D 268 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y HIS D 269 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y HIS D 270 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y HIS D 271 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y HIS D 272 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y HIS D 273 UNP Q19KF7 EXPRESSION TAG SEQADV 6H2Y HIS D 274 UNP Q19KF7 EXPRESSION TAG SEQRES 1 D 275 MET GLY PRO ASP SER ASP ARG LEU GLN GLN ARG ARG VAL SEQRES 2 D 275 ALA ALA ASP ILE GLY THR GLY LEU ALA ASP ALA LEU THR SEQRES 3 D 275 ALA PRO LEU ASP HIS LYS ASP LYS GLY LEU LYS SER LEU SEQRES 4 D 275 THR LEU GLU ASP SER ILE PRO GLN ASN GLY THR LEU THR SEQRES 5 D 275 LEU SER ALA GLN GLY ALA GLU LYS THR PHE LYS ALA GLY SEQRES 6 D 275 ASP LYS ASP ASN SER LEU ASN THR GLY LYS LEU LYS ASN SEQRES 7 D 275 ASP LYS ILE SER ARG PHE ASP PHE VAL GLN LYS ILE GLU SEQRES 8 D 275 VAL ASP GLY GLN THR ILE THR LEU ALA SER GLY GLU PHE SEQRES 9 D 275 GLN ILE TYR LYS GLN ASN HIS SER ALA VAL VAL ALA LEU SEQRES 10 D 275 GLN ILE GLU LYS ILE ASN ASN PRO ASP LYS THR ASP SER SEQRES 11 D 275 LEU ILE ASN GLN ARG SER PHE LEU VAL SER GLY LEU GLY SEQRES 12 D 275 GLY GLU HIS THR ALA PHE ASN GLN LEU PRO GLY GLY LYS SEQRES 13 D 275 ALA GLU TYR HIS GLY LYS ALA PHE SER SER ASP ASP PRO SEQRES 14 D 275 ASN GLY ARG LEU HIS TYR SER ILE ASP PHE THR LYS LYS SEQRES 15 D 275 GLN GLY TYR GLY ARG ILE GLU HIS LEU LYS THR LEU GLU SEQRES 16 D 275 GLN ASN VAL GLU LEU ALA ALA ALA GLU LEU LYS ALA ASP SEQRES 17 D 275 GLU LYS SER HIS ALA VAL ILE LEU GLY ASP THR ARG TYR SEQRES 18 D 275 GLY SER GLU GLU LYS GLY THR TYR HIS LEU ALA LEU PHE SEQRES 19 D 275 GLY ASP ARG ALA GLN GLU ILE ALA GLY SER ALA THR VAL SEQRES 20 D 275 LYS ILE GLY GLU LYS VAL HIS GLU ILE GLY ILE ALA GLY SEQRES 21 D 275 LYS GLN LYS LEU ALA ALA ALA LEU GLU HIS HIS HIS HIS SEQRES 22 D 275 HIS HIS SEQRES 1 H 224 GLU VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 H 224 PRO GLY SER SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 H 224 GLY THR VAL ILE ASP TYR PRO ILE THR TRP VAL ARG GLN SEQRES 4 H 224 ALA PRO GLY GLN GLY LEU GLU TRP VAL GLY GLY PHE VAL SEQRES 5 H 224 PRO LEU PHE ARG THR SER ASN TYR GLY GLN LYS PHE GLN SEQRES 6 H 224 GLY ARG VAL THR ILE THR ALA ASP LYS SER THR SER THR SEQRES 7 H 224 ALA SER MET GLU LEU ASN SER LEU THR SER GLU ASP THR SEQRES 8 H 224 ALA ILE TYR TYR CYS ALA ARG GLY ASP THR ALA MET GLY SEQRES 9 H 224 PRO PHE ASP TYR TRP GLY GLN GLY THR LEU VAL THR VAL SEQRES 10 H 224 SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU SEQRES 11 H 224 ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA SEQRES 12 H 224 LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL SEQRES 13 H 224 THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL SEQRES 14 H 224 HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SEQRES 15 H 224 SER LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU SEQRES 16 H 224 GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SEQRES 17 H 224 SER ASN THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SER SEQRES 18 H 224 CYS ASP LYS SEQRES 1 L 216 VAL VAL SER TYR VAL LEU THR GLN PRO PRO SER LEU SER SEQRES 2 L 216 VAL ALA PRO GLY LYS THR ALA THR LEU THR CYS GLY GLY SEQRES 3 L 216 ASN ASN ILE ALA GLY LYS THR VAL HIS TRP TYR GLN GLN SEQRES 4 L 216 ARG PRO GLY GLN ALA PRO VAL LEU VAL ILE SER TYR ASP SEQRES 5 L 216 SER ASP ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SEQRES 6 L 216 SER ASN SER ALA ASN THR ALA THR LEU THR ILE SER ARG SEQRES 7 L 216 VAL GLU ALA GLY ASP GLU ALA ASP TYR TYR CYS GLN VAL SEQRES 8 L 216 TRP ASP ARG ASN SER ASP HIS TRP VAL PHE GLY GLY GLY SEQRES 9 L 216 THR LYS LEU THR VAL LEU GLY GLN PRO LYS ALA ALA PRO SEQRES 10 L 216 SER VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN SEQRES 11 L 216 ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE SEQRES 12 L 216 TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SEQRES 13 L 216 SER PRO VAL LYS ALA GLY VAL GLU THR THR THR PRO SER SEQRES 14 L 216 LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SEQRES 15 L 216 SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SEQRES 16 L 216 SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS SEQRES 17 L 216 THR VAL ALA PRO THR GLU CYS SER HET EDO H 301 4 HET EDO H 302 4 HET EDO H 303 4 HET EDO H 304 4 HET EDO H 305 4 HET EDO H 306 4 HET EDO H 307 4 HET EDO H 308 4 HET PEG H 309 7 HET EDO L 301 4 HET EDO L 302 4 HET EDO L 303 4 HET EDO L 304 4 HET P33 L 305 22 HET PG4 L 306 13 HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM P33 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN EDO ETHYLENE GLYCOL HETSYN P33 HEPTAETHYLENE GLYCOL, PEG330 FORMUL 4 EDO 12(C2 H6 O2) FORMUL 12 PEG C4 H10 O3 FORMUL 17 P33 C14 H30 O8 FORMUL 18 PG4 C8 H18 O5 FORMUL 19 HOH *74(H2 O) HELIX 1 AA1 ASN D 71 LEU D 75 5 5 HELIX 2 AA2 THR H 87 THR H 91 5 5 HELIX 3 AA3 SER H 162 ALA H 164 5 3 HELIX 4 AA4 SER H 192 THR H 197 5 6 HELIX 5 AA5 LYS H 207 ASN H 210 5 4 HELIX 6 AA6 ASN L 26 LYS L 30 5 5 HELIX 7 AA7 GLU L 78 GLU L 82 5 5 HELIX 8 AA8 SER L 123 ALA L 129 1 7 HELIX 9 AA9 THR L 183 SER L 189 1 7 SHEET 1 AA1 2 LEU D 38 THR D 39 0 SHEET 2 AA1 2 SER D 69 LEU D 70 -1 O LEU D 70 N LEU D 38 SHEET 1 AA2 6 ALA D 57 LYS D 62 0 SHEET 2 AA2 6 THR D 49 ALA D 54 -1 N LEU D 50 O PHE D 61 SHEET 3 AA2 6 ILE D 80 ILE D 89 -1 O ASP D 84 N SER D 53 SHEET 4 AA2 6 ILE D 96 LYS D 107 -1 O PHE D 103 N PHE D 83 SHEET 5 AA2 6 SER D 111 ASN D 122 -1 O ALA D 115 N GLN D 104 SHEET 6 AA2 6 LEU D 130 GLY D 143 -1 O GLN D 133 N GLU D 119 SHEET 1 AA310 LEU D 232 PHE D 233 0 SHEET 2 AA310 GLU D 239 ILE D 248 -1 O GLU D 239 N PHE D 233 SHEET 3 AA310 LYS D 251 GLN D 261 -1 O ILE D 255 N ALA D 244 SHEET 4 AA310 GLU D 157 SER D 164 -1 N PHE D 163 O GLY D 256 SHEET 5 AA310 ASP D 167 SER D 175 -1 O LEU D 172 N GLY D 160 SHEET 6 AA310 GLY D 185 GLU D 188 -1 O ARG D 186 N HIS D 173 SHEET 7 AA310 GLU D 198 ALA D 206 -1 O LEU D 199 N GLY D 185 SHEET 8 AA310 ALA D 212 ARG D 219 -1 O VAL D 213 N LYS D 205 SHEET 9 AA310 THR D 227 HIS D 229 -1 O TYR D 228 N GLY D 216 SHEET 10 AA310 GLU D 239 ILE D 248 -1 O THR D 245 N THR D 227 SHEET 1 AA4 4 LEU H 4 GLN H 6 0 SHEET 2 AA4 4 VAL H 18 ALA H 24 -1 O LYS H 23 N VAL H 5 SHEET 3 AA4 4 THR H 78 LEU H 83 -1 O MET H 81 N VAL H 20 SHEET 4 AA4 4 VAL H 68 ASP H 73 -1 N THR H 71 O SER H 80 SHEET 1 AA5 6 GLU H 10 LYS H 12 0 SHEET 2 AA5 6 THR H 113 VAL H 117 1 O LEU H 114 N GLU H 10 SHEET 3 AA5 6 ALA H 92 ARG H 98 -1 N ALA H 92 O VAL H 115 SHEET 4 AA5 6 ILE H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AA5 6 LEU H 45 VAL H 52 -1 O GLU H 46 N ARG H 38 SHEET 6 AA5 6 THR H 57 TYR H 60 -1 O THR H 57 N VAL H 52 SHEET 1 AA6 4 GLU H 10 LYS H 12 0 SHEET 2 AA6 4 THR H 113 VAL H 117 1 O LEU H 114 N GLU H 10 SHEET 3 AA6 4 ALA H 92 ARG H 98 -1 N ALA H 92 O VAL H 115 SHEET 4 AA6 4 TYR H 108 TRP H 109 -1 O TYR H 108 N ARG H 98 SHEET 1 AA7 4 SER H 126 LEU H 130 0 SHEET 2 AA7 4 ALA H 142 TYR H 151 -1 O GLY H 145 N LEU H 130 SHEET 3 AA7 4 TYR H 182 VAL H 190 -1 O TYR H 182 N TYR H 151 SHEET 4 AA7 4 VAL H 169 THR H 171 -1 N HIS H 170 O VAL H 187 SHEET 1 AA8 4 SER H 126 LEU H 130 0 SHEET 2 AA8 4 ALA H 142 TYR H 151 -1 O GLY H 145 N LEU H 130 SHEET 3 AA8 4 TYR H 182 VAL H 190 -1 O TYR H 182 N TYR H 151 SHEET 4 AA8 4 VAL H 175 LEU H 176 -1 N VAL H 175 O SER H 183 SHEET 1 AA9 3 THR H 157 TRP H 160 0 SHEET 2 AA9 3 ILE H 201 HIS H 206 -1 O ASN H 203 N SER H 159 SHEET 3 AA9 3 THR H 211 ARG H 216 -1 O VAL H 213 N VAL H 204 SHEET 1 AB1 5 SER L 9 VAL L 12 0 SHEET 2 AB1 5 THR L 103 VAL L 107 1 O THR L 106 N LEU L 10 SHEET 3 AB1 5 ALA L 83 ASP L 91 -1 N ALA L 83 O LEU L 105 SHEET 4 AB1 5 HIS L 33 GLN L 37 -1 N GLN L 37 O ASP L 84 SHEET 5 AB1 5 VAL L 44 ILE L 47 -1 O VAL L 46 N TRP L 34 SHEET 1 AB2 4 SER L 9 VAL L 12 0 SHEET 2 AB2 4 THR L 103 VAL L 107 1 O THR L 106 N LEU L 10 SHEET 3 AB2 4 ALA L 83 ASP L 91 -1 N ALA L 83 O LEU L 105 SHEET 4 AB2 4 HIS L 96 PHE L 99 -1 O HIS L 96 N ASP L 91 SHEET 1 AB3 3 ALA L 18 GLY L 23 0 SHEET 2 AB3 3 THR L 69 ILE L 74 -1 O LEU L 72 N LEU L 20 SHEET 3 AB3 3 PHE L 61 SER L 66 -1 N SER L 62 O THR L 73 SHEET 1 AB4 4 SER L 116 PHE L 120 0 SHEET 2 AB4 4 ALA L 132 PHE L 141 -1 O LEU L 137 N THR L 118 SHEET 3 AB4 4 TYR L 174 LEU L 182 -1 O LEU L 182 N ALA L 132 SHEET 4 AB4 4 VAL L 161 THR L 163 -1 N GLU L 162 O TYR L 179 SHEET 1 AB5 4 SER L 116 PHE L 120 0 SHEET 2 AB5 4 ALA L 132 PHE L 141 -1 O LEU L 137 N THR L 118 SHEET 3 AB5 4 TYR L 174 LEU L 182 -1 O LEU L 182 N ALA L 132 SHEET 4 AB5 4 SER L 167 LYS L 168 -1 N SER L 167 O ALA L 175 SHEET 1 AB6 4 SER L 155 VAL L 157 0 SHEET 2 AB6 4 THR L 147 ALA L 152 -1 N ALA L 152 O SER L 155 SHEET 3 AB6 4 TYR L 193 HIS L 199 -1 O GLN L 196 N ALA L 149 SHEET 4 AB6 4 SER L 202 VAL L 208 -1 O VAL L 204 N VAL L 197 SSBOND 1 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 2 CYS H 146 CYS H 202 1555 1555 2.01 SSBOND 3 CYS L 22 CYS L 87 1555 1555 2.01 SSBOND 4 CYS L 136 CYS L 195 1555 1555 2.04 CISPEP 1 PHE H 152 PRO H 153 0 -2.78 CISPEP 2 GLU H 154 PRO H 155 0 -2.66 CISPEP 3 TYR L 142 PRO L 143 0 1.16 SITE 1 AC1 3 GLY H 196 GLN H 198 THR H 199 SITE 1 AC2 1 LYS H 123 SITE 1 AC3 2 SER H 126 VAL H 127 SITE 1 AC4 3 LYS H 19 THR H 78 SER H 80 SITE 1 AC5 2 GLN H 39 PRO H 41 SITE 1 AC6 2 ASN L 25 ASN L 26 SITE 1 AC7 2 VAL H 5 LYS H 23 SITE 1 AC8 1 ALA H 174 SITE 1 AC9 2 LEU H 114 GLU H 154 SITE 1 AD1 4 HIS H 170 THR H 189 SER L 116 SER L 139 SITE 1 AD2 3 ASP L 153 SER L 154 GLU L 205 SITE 1 AD3 1 GLU L 200 SITE 1 AD4 1 LYS L 188 SITE 1 AD5 9 GLN H 43 GLN H 198 ASP L 84 TYR L 86 SITE 2 AD5 9 GLY L 101 GLY L 102 LYS L 104 LEU L 105 SITE 3 AD5 9 THR L 106 SITE 1 AD6 6 PRO L 156 VAL L 157 ALA L 159 LEU L 182 SITE 2 AD6 6 GLN L 186 TYR L 193 CRYST1 42.979 65.279 278.828 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023267 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015319 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003586 0.00000