HEADER CHAPERONE 06-AUG-18 6H9U TITLE CRYSTAL STRUCTURE OF THE BIP NBD AND MANF SAP COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOPLASMIC RETICULUM CHAPERONE BIP; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 78 KDA GLUCOSE-REGULATED PROTEIN,GRP-78,BINDING- COMPND 5 IMMUNOGLOBULIN PROTEIN,BIP,HEAT SHOCK PROTEIN 70 FAMILY PROTEIN 5, COMPND 6 HSP70 FAMILY PROTEIN 5,HEAT SHOCK PROTEIN FAMILY A MEMBER 5, COMPND 7 IMMUNOGLOBULIN HEAVY CHAIN-BINDING PROTEIN; COMPND 8 EC: 3.6.4.10; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: MESENCEPHALIC ASTROCYTE-DERIVED NEUROTROPHIC FACTOR; COMPND 12 CHAIN: B; COMPND 13 SYNONYM: ARGININE-RICH PROTEIN,PROTEIN ARMET; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRICETULUS GRISEUS; SOURCE 3 ORGANISM_COMMON: CHINESE HAMSTER; SOURCE 4 ORGANISM_TAXID: 10029; SOURCE 5 GENE: HSPA5, GRP78, I79_019946; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI M15; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 1007065; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 GENE: MANF, ARMET; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MANF, BIP, NDI, HSP70, ARMET, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR Y.YAN,D.RON REVDAT 4 06-NOV-24 6H9U 1 REMARK REVDAT 3 17-JAN-24 6H9U 1 LINK REVDAT 2 13-FEB-19 6H9U 1 JRNL REVDAT 1 06-FEB-19 6H9U 0 JRNL AUTH Y.YAN,C.RATO,L.ROHLAND,S.PREISSLER,D.RON JRNL TITL MANF ANTAGONIZES NUCLEOTIDE EXCHANGE BY THE ENDOPLASMIC JRNL TITL 2 RETICULUM CHAPERONE BIP. JRNL REF NAT COMMUN V. 10 541 2019 JRNL REFN ESSN 2041-1723 JRNL PMID 30710085 JRNL DOI 10.1038/S41467-019-08450-4 REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0189 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.47 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 56543 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2861 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.57 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.61 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4224 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.3010 REMARK 3 BIN FREE R VALUE SET COUNT : 172 REMARK 3 BIN FREE R VALUE : 0.3200 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3231 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.09000 REMARK 3 B22 (A**2) : -1.20000 REMARK 3 B33 (A**2) : 0.67000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.53000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.086 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.082 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.069 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.049 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3289 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3108 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4438 ; 1.225 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7207 ; 0.866 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 417 ; 5.455 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 149 ;36.181 ;24.832 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 588 ;10.774 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;10.460 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 503 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3679 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 642 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1674 ; 0.977 ; 2.400 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1673 ; 0.977 ; 2.398 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2089 ; 1.608 ; 3.593 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2090 ; 1.607 ; 3.594 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1615 ; 1.438 ; 2.625 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1612 ; 1.439 ; 2.626 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2348 ; 2.362 ; 3.847 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3727 ; 4.307 ;29.496 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3617 ; 4.092 ;28.838 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6H9U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1200011321. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59404 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 42.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.86000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3LDN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.92 M SODIUM MALONATE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 76.65500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.37500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 76.65500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.37500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 687 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 407 REMARK 465 ASP A 408 REMARK 465 GLN A 409 REMARK 465 ASP A 410 REMARK 465 THR A 411 REMARK 465 GLY A 412 REMARK 465 ASP A 413 REMARK 465 THR B 126 REMARK 465 VAL B 127 REMARK 465 ASP B 128 REMARK 465 LEU B 129 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 316 CG CD OE1 OE2 REMARK 470 LYS A 344 CG CD CE NZ REMARK 470 LYS B 130 CG CD CE NZ REMARK 470 LYS B 131 CG CD CE NZ REMARK 470 LEU B 132 CG CD1 CD2 REMARK 470 LYS B 135 CG CD CE NZ REMARK 470 LYS B 139 CG CD CE NZ REMARK 470 GLU B 146 CG CD OE1 OE2 REMARK 470 MET B 147 CG SD CE REMARK 470 LYS B 149 CG CD CE NZ REMARK 470 MET B 165 CG SD CE REMARK 470 LYS B 167 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 166 -48.39 -137.20 REMARK 500 PHE A 379 31.08 -94.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 502 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 800 O REMARK 620 2 HOH A 864 O 96.7 REMARK 620 3 HOH A 932 O 92.2 109.0 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLT A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 502 DBREF 6H9U A 28 413 UNP G3I8R9 BIP_CRIGR 28 413 DBREF 6H9U B 126 169 UNP Q9CXI5 MANF_MOUSE 126 169 SEQRES 1 A 386 GLY THR VAL VAL GLY ILE ASP LEU GLY THR THR TYR SER SEQRES 2 A 386 CYS VAL GLY VAL PHE LYS ASN GLY ARG VAL GLU ILE ILE SEQRES 3 A 386 ALA ASN ASP GLN GLY ASN ARG ILE THR PRO SER TYR VAL SEQRES 4 A 386 ALA PHE THR PRO GLU GLY GLU ARG LEU ILE GLY ASP ALA SEQRES 5 A 386 ALA LYS ASN GLN LEU THR SER ASN PRO GLU ASN THR VAL SEQRES 6 A 386 PHE ASP ALA LYS ARG LEU ILE GLY ARG THR TRP ASN ASP SEQRES 7 A 386 PRO SER VAL GLN GLN ASP ILE LYS PHE LEU PRO PHE LYS SEQRES 8 A 386 VAL VAL GLU LYS LYS THR LYS PRO TYR ILE GLN VAL ASP SEQRES 9 A 386 ILE GLY GLY GLY GLN THR LYS THR PHE ALA PRO GLU GLU SEQRES 10 A 386 ILE SER ALA MET VAL LEU THR LYS MET LYS GLU THR ALA SEQRES 11 A 386 GLU ALA TYR LEU GLY LYS LYS VAL THR HIS ALA VAL VAL SEQRES 12 A 386 THR VAL PRO ALA TYR PHE ASN ASP ALA GLN ARG GLN ALA SEQRES 13 A 386 THR LYS ASP ALA GLY THR ILE ALA GLY LEU ASN VAL MET SEQRES 14 A 386 ARG ILE ILE ASN GLU PRO THR ALA ALA ALA ILE ALA TYR SEQRES 15 A 386 GLY LEU ASP LYS ARG GLU GLY GLU LYS ASN ILE LEU VAL SEQRES 16 A 386 PHE ASP LEU GLY GLY GLY THR PHE ASP VAL SER LEU LEU SEQRES 17 A 386 THR ILE ASP ASN GLY VAL PHE GLU VAL VAL ALA THR ASN SEQRES 18 A 386 GLY ASP THR HIS LEU GLY GLY GLU ASP PHE ASP GLN ARG SEQRES 19 A 386 VAL MET GLU HIS PHE ILE LYS LEU TYR LYS LYS LYS THR SEQRES 20 A 386 GLY LYS ASP VAL ARG LYS ASP ASN ARG ALA VAL GLN LYS SEQRES 21 A 386 LEU ARG ARG GLU VAL GLU LYS ALA LYS ARG ALA LEU SER SEQRES 22 A 386 SER GLN HIS GLN ALA ARG ILE GLU ILE GLU SER PHE PHE SEQRES 23 A 386 GLU GLY GLU ASP PHE SER GLU THR LEU THR ARG ALA LYS SEQRES 24 A 386 PHE GLU GLU LEU ASN MET ASP LEU PHE ARG SER THR MET SEQRES 25 A 386 LYS PRO VAL GLN LYS VAL LEU GLU ASP SER ASP LEU LYS SEQRES 26 A 386 LYS SER ASP ILE ASP GLU ILE VAL LEU VAL GLY GLY SER SEQRES 27 A 386 THR ARG ILE PRO LYS ILE GLN GLN LEU VAL LYS GLU PHE SEQRES 28 A 386 PHE ASN GLY LYS GLU PRO SER ARG GLY ILE ASN PRO ASP SEQRES 29 A 386 GLU ALA VAL ALA TYR GLY ALA ALA VAL GLN ALA GLY VAL SEQRES 30 A 386 LEU SER GLY ASP GLN ASP THR GLY ASP SEQRES 1 B 44 THR VAL ASP LEU LYS LYS LEU ARG VAL LYS GLU LEU LYS SEQRES 2 B 44 LYS ILE LEU ASP ASP TRP GLY GLU MET CYS LYS GLY CYS SEQRES 3 B 44 ALA GLU LYS SER ASP TYR ILE ARG LYS ILE ASN GLU LEU SEQRES 4 B 44 MET PRO LYS TYR ALA HET MLT A 501 9 HET NA A 502 1 HETNAM MLT D-MALATE HETNAM NA SODIUM ION HETSYN MLT (2R)-2-HYDROXYBUTANEDIOIC ACID; 2-HYDROXY-SUCCINIC ACID FORMUL 3 MLT C4 H6 O5 FORMUL 4 NA NA 1+ FORMUL 5 HOH *350(H2 O) HELIX 1 AA1 GLY A 77 ASN A 82 1 6 HELIX 2 AA2 ASP A 94 LEU A 98 5 5 HELIX 3 AA3 ASP A 105 LEU A 115 1 11 HELIX 4 AA4 ALA A 141 GLY A 162 1 22 HELIX 5 AA5 ASN A 177 ALA A 191 1 15 HELIX 6 AA6 GLU A 201 TYR A 209 1 9 HELIX 7 AA7 GLY A 210 ARG A 214 5 5 HELIX 8 AA8 GLY A 254 GLY A 275 1 22 HELIX 9 AA9 ASP A 277 LYS A 280 5 4 HELIX 10 AB1 ASP A 281 LEU A 299 1 19 HELIX 11 AB2 ARG A 324 THR A 338 1 15 HELIX 12 AB3 THR A 338 SER A 349 1 12 HELIX 13 AB4 LYS A 352 ILE A 356 5 5 HELIX 14 AB5 GLY A 363 ARG A 367 5 5 HELIX 15 AB6 ILE A 368 PHE A 379 1 12 HELIX 16 AB7 GLU A 392 SER A 406 1 15 HELIX 17 AB8 ARG B 133 TRP B 144 1 12 HELIX 18 AB9 GLU B 153 MET B 165 1 13 SHEET 1 AA1 3 ARG A 49 ILE A 52 0 SHEET 2 AA1 3 TYR A 39 LYS A 46 -1 N VAL A 44 O GLU A 51 SHEET 3 AA1 3 THR A 62 PRO A 63 -1 O THR A 62 N SER A 40 SHEET 1 AA2 5 ARG A 49 ILE A 52 0 SHEET 2 AA2 5 TYR A 39 LYS A 46 -1 N VAL A 44 O GLU A 51 SHEET 3 AA2 5 VAL A 30 ASP A 34 -1 N VAL A 30 O PHE A 45 SHEET 4 AA2 5 HIS A 167 VAL A 172 1 O VAL A 169 N ILE A 33 SHEET 5 AA2 5 ASN A 194 ASN A 200 1 O MET A 196 N ALA A 168 SHEET 1 AA3 2 VAL A 66 PHE A 68 0 SHEET 2 AA3 2 ARG A 74 ILE A 76 -1 O LEU A 75 N ALA A 67 SHEET 1 AA4 3 LYS A 118 LYS A 122 0 SHEET 2 AA4 3 LYS A 125 GLY A 133 -1 O TYR A 127 N VAL A 120 SHEET 3 AA4 3 GLN A 136 PHE A 140 -1 O PHE A 140 N ILE A 128 SHEET 1 AA5 4 VAL A 241 ASP A 250 0 SHEET 2 AA5 4 PHE A 230 ASP A 238 -1 N LEU A 234 O ALA A 246 SHEET 3 AA5 4 GLU A 217 LEU A 225 -1 N ILE A 220 O LEU A 235 SHEET 4 AA5 4 GLU A 358 VAL A 362 1 O VAL A 360 N PHE A 223 SHEET 1 AA6 2 GLN A 304 ILE A 309 0 SHEET 2 AA6 2 PHE A 318 THR A 323 -1 O LEU A 322 N ALA A 305 SSBOND 1 CYS B 148 CYS B 151 1555 1555 2.03 LINK NA NA A 502 O HOH A 800 1555 1555 2.66 LINK NA NA A 502 O HOH A 864 1555 1555 2.89 LINK NA NA A 502 O HOH A 932 1555 1555 2.71 SITE 1 AC1 9 ASN A 82 LYS A 123 LYS A 125 ARG A 283 SITE 2 AC1 9 LYS A 287 ARG A 290 HOH A 679 HOH A 746 SITE 3 AC1 9 HOH A 777 SITE 1 AC2 6 THR A 37 THR A 38 TYR A 39 HOH A 800 SITE 2 AC2 6 HOH A 864 HOH A 932 CRYST1 153.310 66.750 44.300 90.00 106.54 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006523 0.000000 0.001937 0.00000 SCALE2 0.000000 0.014981 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023548 0.00000