HEADER RNA BINDING PROTEIN 08-AUG-18 6HAT TITLE GLOBULAR DOMAIN OF HERPESVIRUS SAIMIRI ORF57 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MRNA EXPORT FACTOR ICP27 HOMOLOG; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 52 KDA IMMEDIATE-EARLY PHOSPHOPROTEIN,EB2 PROTEIN HOMOLOG; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: N-TERMINAL GLYCINE NON-NATIVE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SAIMIRIINE HERPESVIRUS 2 (STRAIN 11); SOURCE 3 ORGANISM_COMMON: SAHV-2; SOURCE 4 ORGANISM_TAXID: 10383; SOURCE 5 STRAIN: 11; SOURCE 6 GENE: EJRF1, ORF57; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: T7 EXPRESS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET-21A KEYWDS HOMODIMER, ICP27, IHD, RNA, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.B.TUNNICLIFFE,C.LEVY,H.D.RUIZ NIVIA,R.M.SANDRI-GOLDIN,A.P.GOLOVANOV REVDAT 5 30-MAR-22 6HAT 1 REMARK REVDAT 4 10-APR-19 6HAT 1 SOURCE REVDAT 3 13-MAR-19 6HAT 1 JRNL REVDAT 2 05-DEC-18 6HAT 1 JRNL REVDAT 1 21-NOV-18 6HAT 0 JRNL AUTH R.B.TUNNICLIFFE,C.LEVY,H.D.RUIZ NIVIA,R.M.SANDRI-GOLDIN, JRNL AUTH 2 A.P.GOLOVANOV JRNL TITL STRUCTURAL IDENTIFICATION OF CONSERVED RNA BINDING SITES IN JRNL TITL 2 HERPESVIRUS ORF57 HOMOLOGS: IMPLICATIONS FOR PAN RNA JRNL TITL 3 RECOGNITION. JRNL REF NUCLEIC ACIDS RES. V. 47 1987 2019 JRNL REFN ESSN 1362-4962 JRNL PMID 30462297 JRNL DOI 10.1093/NAR/GKY1181 REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 76996 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.168 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.590 REMARK 3 FREE R VALUE TEST SET COUNT : 3810 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.4820 - 5.5667 0.99 5277 143 0.1672 0.1718 REMARK 3 2 5.5667 - 4.4194 1.00 5292 140 0.1301 0.1566 REMARK 3 3 4.4194 - 3.8610 1.00 5314 139 0.1234 0.1392 REMARK 3 4 3.8610 - 3.5081 1.00 5338 140 0.1354 0.1378 REMARK 3 5 3.5081 - 3.2567 1.00 5299 144 0.1526 0.1718 REMARK 3 6 3.2567 - 3.0648 1.00 5315 142 0.1557 0.1746 REMARK 3 7 3.0648 - 2.9113 1.00 5332 142 0.1538 0.1600 REMARK 3 8 2.9113 - 2.7846 1.00 5348 146 0.1479 0.1768 REMARK 3 9 2.7846 - 2.6774 1.00 5319 139 0.1421 0.1644 REMARK 3 10 2.6774 - 2.5850 1.00 5322 137 0.1389 0.1901 REMARK 3 11 2.5850 - 2.5042 1.00 5315 144 0.1356 0.1417 REMARK 3 12 2.5042 - 2.4326 1.00 5297 140 0.1338 0.1646 REMARK 3 13 2.4326 - 2.3686 1.00 5345 142 0.1319 0.1664 REMARK 3 14 2.3686 - 2.3108 1.00 5316 141 0.1313 0.1658 REMARK 3 15 2.3108 - 2.2583 1.00 5356 139 0.1335 0.1742 REMARK 3 16 2.2583 - 2.2102 1.00 5296 144 0.1431 0.1557 REMARK 3 17 2.2102 - 2.1660 1.00 5276 145 0.1489 0.1687 REMARK 3 18 2.1660 - 2.1251 1.00 5369 141 0.1533 0.1691 REMARK 3 19 2.1251 - 2.0872 1.00 5311 142 0.1674 0.2145 REMARK 3 20 2.0872 - 2.0518 1.00 5312 136 0.1781 0.1819 REMARK 3 21 2.0518 - 2.0187 1.00 5354 143 0.1860 0.1940 REMARK 3 22 2.0187 - 1.9876 1.00 5284 139 0.1984 0.2227 REMARK 3 23 1.9876 - 1.9584 1.00 5354 145 0.2106 0.2489 REMARK 3 24 1.9584 - 1.9308 1.00 5293 138 0.2121 0.2243 REMARK 3 25 1.9308 - 1.9047 1.00 5360 139 0.2302 0.2440 REMARK 3 26 1.9047 - 1.8800 1.00 5231 142 0.2523 0.2740 REMARK 3 27 1.8800 - 1.8565 0.96 5143 138 0.2728 0.2597 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 4483 REMARK 3 ANGLE : 1.162 6107 REMARK 3 CHIRALITY : 0.062 726 REMARK 3 PLANARITY : 0.008 764 REMARK 3 DIHEDRAL : 11.464 2763 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 147 THROUGH 417) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3376 2.3618 82.1798 REMARK 3 T TENSOR REMARK 3 T11: 0.3150 T22: 0.2576 REMARK 3 T33: 0.2776 T12: -0.0190 REMARK 3 T13: 0.0341 T23: 0.0320 REMARK 3 L TENSOR REMARK 3 L11: 1.0978 L22: 3.3607 REMARK 3 L33: 1.9710 L12: 0.6093 REMARK 3 L13: -0.3905 L23: -1.5486 REMARK 3 S TENSOR REMARK 3 S11: -0.1050 S12: -0.0205 S13: -0.2000 REMARK 3 S21: -0.0817 S22: 0.1270 S23: 0.0306 REMARK 3 S31: 0.3894 S32: -0.1032 S33: 0.0312 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 145 THROUGH 417) REMARK 3 ORIGIN FOR THE GROUP (A): 1.8630 26.1372 81.9411 REMARK 3 T TENSOR REMARK 3 T11: 0.1522 T22: 0.2044 REMARK 3 T33: 0.1621 T12: -0.0136 REMARK 3 T13: -0.0002 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 0.9185 L22: 1.1055 REMARK 3 L33: 1.1893 L12: -0.2607 REMARK 3 L13: 0.1332 L23: -0.4353 REMARK 3 S TENSOR REMARK 3 S11: -0.0574 S12: -0.1234 S13: -0.0098 REMARK 3 S21: 0.1254 S22: 0.0476 S23: 0.0002 REMARK 3 S31: -0.0488 S32: -0.0367 S33: 0.0180 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'D' AND RESID 1 THROUGH 1) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6047 40.7219 92.2516 REMARK 3 T TENSOR REMARK 3 T11: 1.1378 T22: 0.9749 REMARK 3 T33: 0.6732 T12: -0.0570 REMARK 3 T13: -0.1505 T23: -0.0045 REMARK 3 L TENSOR REMARK 3 L11: 3.4273 L22: 4.1958 REMARK 3 L33: 4.4302 L12: 2.1335 REMARK 3 L13: 1.7555 L23: 3.1181 REMARK 3 S TENSOR REMARK 3 S11: 6.1401 S12: -18.7030 S13: -3.5470 REMARK 3 S21: 16.2698 S22: -5.5041 S23: -1.8323 REMARK 3 S31: 5.7866 S32: 9.3078 S33: -0.6452 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6HAT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1200011252. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 77002 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.856 REMARK 200 RESOLUTION RANGE LOW (A) : 48.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : 0.08329 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.0400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 13.50 REMARK 200 R MERGE FOR SHELL (I) : 0.96740 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.550 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 21.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.12 M ALCOHOLS (0.2 M 1,6-HEXANEDIOL; REMARK 280 0.2 M 1-BUTANOL; 0.2 M 1,2-PROPANEDIOL; 0.2M 2-PROPANOL; 0.2 M 1, REMARK 280 4-BUTANEDIOL; 0.2M 1,3-PROPANEDIOL), 0.1 M (IMIDAZOLE, MES) REMARK 280 BUFFER SYSTEM PH 6.5, 50 % V/V GOL_P4K MIX (MORPHEUS HT96 D3 REMARK 280 MOLECULAR DIMENSIONS), VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.05400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.35100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 59.32600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.35100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.05400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 59.32600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 145 REMARK 465 PRO A 146 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 692 O HOH A 693 1.87 REMARK 500 O HOH A 680 O HOH A 716 1.96 REMARK 500 O HOH B 684 O HOH B 729 2.02 REMARK 500 OD1 ASP B 303 O HOH B 601 2.04 REMARK 500 O HOH A 718 O HOH A 721 2.14 REMARK 500 OE1 GLU B 175 O HOH B 602 2.15 REMARK 500 OG SER A 265 OD1 ASN A 267 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 293 CB CYS A 293 SG 0.117 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 293 CA - CB - SG ANGL. DEV. = 7.5 DEGREES REMARK 500 ARG B 190 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG B 190 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MSE A 297 40.35 -98.78 REMARK 500 ASN A 316 21.93 -153.12 REMARK 500 LYS A 388 -4.50 -150.80 REMARK 500 ASN B 316 20.14 -152.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 293 SG REMARK 620 2 HIS A 385 NE2 107.1 REMARK 620 3 CYS A 389 SG 115.2 109.8 REMARK 620 4 CYS A 389 SG 95.5 97.8 29.3 REMARK 620 5 CYS A 394 SG 91.2 106.1 125.1 152.1 REMARK 620 6 CYS A 394 SG 126.7 100.4 96.1 125.1 36.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 293 SG REMARK 620 2 HIS B 385 NE2 106.4 REMARK 620 3 CYS B 389 SG 114.0 106.1 REMARK 620 4 CYS B 394 SG 103.1 105.9 120.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 503 DBREF 6HAT A 146 417 UNP P13199 ICP27_SHV21 146 417 DBREF 6HAT B 146 417 UNP P13199 ICP27_SHV21 146 417 SEQADV 6HAT GLY A 145 UNP P13199 EXPRESSION TAG SEQADV 6HAT GLY B 145 UNP P13199 EXPRESSION TAG SEQRES 1 A 273 GLY PRO LEU LEU LYS LEU PHE ASP ILE SER ILE LEU PRO SEQRES 2 A 273 LYS SER GLY GLU PRO LYS LEU PHE LEU PRO VAL PRO SER SEQRES 3 A 273 LEU PRO CYS GLN GLU ALA GLU LYS THR ASN ASP LYS TYR SEQRES 4 A 273 VAL LEU ALA MSE ALA GLN ARG ALA MSE HIS ASP VAL PRO SEQRES 5 A 273 ILE SER SER LYS GLN LEU THR ALA ASN LEU LEU PRO VAL SEQRES 6 A 273 LYS PHE LYS PRO LEU LEU SER ILE VAL ARG TYR THR PRO SEQRES 7 A 273 ASN TYR TYR TYR TRP VAL SER MSE ARG LYS GLU THR ILE SEQRES 8 A 273 ALA SER ALA ASN LEU CYS THR VAL ALA ALA PHE LEU ASP SEQRES 9 A 273 GLU SER LEU CYS TRP GLY GLN GLN TYR LEU LYS ASN ASP SEQRES 10 A 273 PHE ILE PHE SER GLU ASN GLY LYS ASP ILE ILE LEU ASP SEQRES 11 A 273 THR SER SER ALA LEU LEU SER GLN LEU VAL HIS LYS ILE SEQRES 12 A 273 LYS MSE LEU PRO PHE CYS HIS CYS LEU MSE GLN THR THR SEQRES 13 A 273 PRO GLN ASP HIS ILE VAL LYS GLN VAL CYS TYR LEU ILE SEQRES 14 A 273 ALA SER ASN ASN ARG ILE LEU ASP ALA VAL ARG TYR LEU SEQRES 15 A 273 GLN THR SER VAL ILE LYS SER PRO ILE VAL LEU LEU LEU SEQRES 16 A 273 ALA TYR ALA VAL CYS LEU PRO ALA ALA ILE ILE CYS THR SEQRES 17 A 273 LYS ASN GLU THR GLN LEU TYR SER HIS CYS MSE ARG ILE SEQRES 18 A 273 LEU LYS GLU TYR ARG PRO GLY ASP VAL MSE ASN ILE LEU SEQRES 19 A 273 HIS GLU SER LEU THR GLN HIS LEU ASN LYS CYS PRO SER SEQRES 20 A 273 SER THR CYS ALA TYR THR THR ARG ALA ILE VAL GLY THR SEQRES 21 A 273 LYS ALA ASN THR THR GLY LEU PHE PHE LEU PRO THR GLN SEQRES 1 B 273 GLY PRO LEU LEU LYS LEU PHE ASP ILE SER ILE LEU PRO SEQRES 2 B 273 LYS SER GLY GLU PRO LYS LEU PHE LEU PRO VAL PRO SER SEQRES 3 B 273 LEU PRO CYS GLN GLU ALA GLU LYS THR ASN ASP LYS TYR SEQRES 4 B 273 VAL LEU ALA MSE ALA GLN ARG ALA MSE HIS ASP VAL PRO SEQRES 5 B 273 ILE SER SER LYS GLN LEU THR ALA ASN LEU LEU PRO VAL SEQRES 6 B 273 LYS PHE LYS PRO LEU LEU SER ILE VAL ARG TYR THR PRO SEQRES 7 B 273 ASN TYR TYR TYR TRP VAL SER MSE ARG LYS GLU THR ILE SEQRES 8 B 273 ALA SER ALA ASN LEU CYS THR VAL ALA ALA PHE LEU ASP SEQRES 9 B 273 GLU SER LEU CYS TRP GLY GLN GLN TYR LEU LYS ASN ASP SEQRES 10 B 273 PHE ILE PHE SER GLU ASN GLY LYS ASP ILE ILE LEU ASP SEQRES 11 B 273 THR SER SER ALA LEU LEU SER GLN LEU VAL HIS LYS ILE SEQRES 12 B 273 LYS MSE LEU PRO PHE CYS HIS CYS LEU MSE GLN THR THR SEQRES 13 B 273 PRO GLN ASP HIS ILE VAL LYS GLN VAL CYS TYR LEU ILE SEQRES 14 B 273 ALA SER ASN ASN ARG ILE LEU ASP ALA VAL ARG TYR LEU SEQRES 15 B 273 GLN THR SER VAL ILE LYS SER PRO ILE VAL LEU LEU LEU SEQRES 16 B 273 ALA TYR ALA VAL CYS LEU PRO ALA ALA ILE ILE CYS THR SEQRES 17 B 273 LYS ASN GLU THR GLN LEU TYR SER HIS CYS MSE ARG ILE SEQRES 18 B 273 LEU LYS GLU TYR ARG PRO GLY ASP VAL MSE ASN ILE LEU SEQRES 19 B 273 HIS GLU SER LEU THR GLN HIS LEU ASN LYS CYS PRO SER SEQRES 20 B 273 SER THR CYS ALA TYR THR THR ARG ALA ILE VAL GLY THR SEQRES 21 B 273 LYS ALA ASN THR THR GLY LEU PHE PHE LEU PRO THR GLN MODRES 6HAT MSE A 187 MET MODIFIED RESIDUE MODRES 6HAT MSE A 192 MET MODIFIED RESIDUE MODRES 6HAT MSE A 230 MET MODIFIED RESIDUE MODRES 6HAT MSE A 289 MET MODIFIED RESIDUE MODRES 6HAT MSE A 297 MET MODIFIED RESIDUE MODRES 6HAT MSE A 363 MET MODIFIED RESIDUE MODRES 6HAT MSE A 375 MET MODIFIED RESIDUE MODRES 6HAT MSE B 187 MET MODIFIED RESIDUE MODRES 6HAT MSE B 192 MET MODIFIED RESIDUE MODRES 6HAT MSE B 230 MET MODIFIED RESIDUE MODRES 6HAT MSE B 289 MET MODIFIED RESIDUE MODRES 6HAT MSE B 297 MET MODIFIED RESIDUE MODRES 6HAT MSE B 363 MET MODIFIED RESIDUE MODRES 6HAT MSE B 375 MET MODIFIED RESIDUE HET MSE A 187 34 HET MSE A 192 17 HET MSE A 230 17 HET MSE A 289 17 HET MSE A 297 34 HET MSE A 363 17 HET MSE A 375 17 HET MSE B 187 17 HET MSE B 192 17 HET MSE B 230 17 HET MSE B 289 17 HET MSE B 297 17 HET MSE B 363 17 HET MSE B 375 17 HET ZN A 501 1 HET ACT B 501 7 HET ZN B 502 1 HET ACT B 503 7 HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION HETNAM ACT ACETATE ION FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 3 ZN 2(ZN 2+) FORMUL 4 ACT 2(C2 H3 O2 1-) FORMUL 7 HOH *344(H2 O) HELIX 1 AA1 ASP A 152 LEU A 156 5 5 HELIX 2 AA2 ASP A 181 MSE A 192 1 12 HELIX 3 AA3 PRO A 196 SER A 199 5 4 HELIX 4 AA4 LEU A 206 ARG A 219 1 14 HELIX 5 AA5 ASN A 223 SER A 237 1 15 HELIX 6 AA6 ASN A 239 ASN A 260 1 22 HELIX 7 AA7 ILE A 272 ASP A 274 5 3 HELIX 8 AA8 THR A 275 LEU A 290 1 16 HELIX 9 AA9 PHE A 292 MSE A 297 1 6 HELIX 10 AB1 GLN A 302 ASN A 317 1 16 HELIX 11 AB2 ARG A 318 GLN A 327 1 10 HELIX 12 AB3 SER A 333 CYS A 351 1 19 HELIX 13 AB4 THR A 352 ASN A 354 5 3 HELIX 14 AB5 GLU A 355 TYR A 369 1 15 HELIX 15 AB6 GLY A 372 CYS A 389 1 18 HELIX 16 AB7 SER A 391 GLY A 403 1 13 HELIX 17 AB8 ASP B 152 LEU B 156 5 5 HELIX 18 AB9 ASP B 181 MSE B 192 1 12 HELIX 19 AC1 PRO B 196 SER B 199 5 4 HELIX 20 AC2 LEU B 206 ARG B 219 1 14 HELIX 21 AC3 ASN B 223 SER B 237 1 15 HELIX 22 AC4 ASN B 239 ASN B 260 1 22 HELIX 23 AC5 ILE B 272 ASP B 274 5 3 HELIX 24 AC6 THR B 275 LEU B 290 1 16 HELIX 25 AC7 PHE B 292 MSE B 297 1 6 HELIX 26 AC8 GLN B 302 ASN B 317 1 16 HELIX 27 AC9 ARG B 318 GLN B 327 1 10 HELIX 28 AD1 SER B 333 CYS B 351 1 19 HELIX 29 AD2 THR B 352 ASN B 354 5 3 HELIX 30 AD3 GLU B 355 TYR B 369 1 15 HELIX 31 AD4 GLY B 372 CYS B 389 1 18 HELIX 32 AD5 THR B 393 GLY B 403 1 11 SHEET 1 AA1 2 GLN A 201 THR A 203 0 SHEET 2 AA1 2 LEU A 414 THR A 416 1 O LEU A 414 N LEU A 202 SHEET 1 AA2 2 GLN B 201 THR B 203 0 SHEET 2 AA2 2 LEU B 414 THR B 416 1 O LEU B 414 N LEU B 202 LINK C ALA A 186 N AMSE A 187 1555 1555 1.33 LINK C ALA A 186 N BMSE A 187 1555 1555 1.33 LINK C AMSE A 187 N ALA A 188 1555 1555 1.33 LINK C BMSE A 187 N ALA A 188 1555 1555 1.33 LINK C ALA A 191 N MSE A 192 1555 1555 1.33 LINK C MSE A 192 N HIS A 193 1555 1555 1.33 LINK C SER A 229 N MSE A 230 1555 1555 1.33 LINK C MSE A 230 N ARG A 231 1555 1555 1.33 LINK C LYS A 288 N MSE A 289 1555 1555 1.32 LINK C MSE A 289 N LEU A 290 1555 1555 1.33 LINK C LEU A 296 N AMSE A 297 1555 1555 1.33 LINK C LEU A 296 N BMSE A 297 1555 1555 1.33 LINK C AMSE A 297 N GLN A 298 1555 1555 1.33 LINK C BMSE A 297 N GLN A 298 1555 1555 1.33 LINK C CYS A 362 N MSE A 363 1555 1555 1.33 LINK C MSE A 363 N ARG A 364 1555 1555 1.35 LINK C VAL A 374 N MSE A 375 1555 1555 1.33 LINK C MSE A 375 N ASN A 376 1555 1555 1.33 LINK C ALA B 186 N MSE B 187 1555 1555 1.34 LINK C MSE B 187 N ALA B 188 1555 1555 1.33 LINK C ALA B 191 N MSE B 192 1555 1555 1.32 LINK C MSE B 192 N HIS B 193 1555 1555 1.32 LINK C SER B 229 N MSE B 230 1555 1555 1.34 LINK C MSE B 230 N ARG B 231 1555 1555 1.34 LINK C LYS B 288 N MSE B 289 1555 1555 1.33 LINK C MSE B 289 N LEU B 290 1555 1555 1.31 LINK C LEU B 296 N MSE B 297 1555 1555 1.33 LINK C MSE B 297 N GLN B 298 1555 1555 1.32 LINK C CYS B 362 N MSE B 363 1555 1555 1.33 LINK C MSE B 363 N ARG B 364 1555 1555 1.34 LINK C VAL B 374 N MSE B 375 1555 1555 1.33 LINK C MSE B 375 N ASN B 376 1555 1555 1.33 LINK SG CYS A 293 ZN ZN A 501 1555 1555 2.01 LINK NE2 HIS A 385 ZN ZN A 501 1555 1555 1.97 LINK SG ACYS A 389 ZN ZN A 501 1555 1555 2.34 LINK SG BCYS A 389 ZN ZN A 501 1555 1555 2.28 LINK SG ACYS A 394 ZN ZN A 501 1555 1555 2.31 LINK SG BCYS A 394 ZN ZN A 501 1555 1555 2.25 LINK SG CYS B 293 ZN ZN B 502 1555 1555 2.41 LINK NE2 HIS B 385 ZN ZN B 502 1555 1555 2.04 LINK SG CYS B 389 ZN ZN B 502 1555 1555 2.29 LINK SG CYS B 394 ZN ZN B 502 1555 1555 2.30 SITE 1 AC1 4 CYS A 293 HIS A 385 CYS A 389 CYS A 394 SITE 1 AC2 6 LEU A 156 TYR B 341 GLU B 368 ARG B 370 SITE 2 AC2 6 ASP B 373 HOH B 675 SITE 1 AC3 4 CYS B 293 HIS B 385 CYS B 389 CYS B 394 SITE 1 AC4 4 LEU B 147 ARG B 219 ILE B 263 HOH B 603 CRYST1 58.108 118.652 130.702 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017209 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008428 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007651 0.00000