data_6HB9 # _entry.id 6HB9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.321 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6HB9 WWPDB D_1200011406 # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 6H8C _pdbx_database_related.db_name PDB _pdbx_database_related.details 'Structure of the human GABARAPL2 protein in complex with the UBA5 LIR motif' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6HB9 _pdbx_database_status.recvd_initial_deposition_date 2018-08-10 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Huber, J.' 1 ? 'Rogov, V.' 2 ? 'Akutsu, M.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Autophagy _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1554-8635 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 16 _citation.language ? _citation.page_first 256 _citation.page_last 270 _citation.title ;An atypical LIR motif within UBA5 (ubiquitin like modifier activating enzyme 5) interacts with GABARAP proteins and mediates membrane localization of UBA5. ; _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1080/15548627.2019.1606637 _citation.pdbx_database_id_PubMed 30990354 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huber, J.' 1 ? primary 'Obata, M.' 2 ? primary 'Gruber, J.' 3 ? primary 'Akutsu, M.' 4 ? primary 'Lohr, F.' 5 ? primary 'Rogova, N.' 6 ? primary 'Guntert, P.' 7 ? primary 'Dikic, I.' 8 ? primary 'Kirkin, V.' 9 ? primary 'Komatsu, M.' 10 ? primary 'Dotsch, V.' 11 ? primary 'Rogov, V.V.' 12 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 99.350 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6HB9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 33.776 _cell.length_a_esd ? _cell.length_b 58.010 _cell.length_b_esd ? _cell.length_c 36.421 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HB9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Gamma-aminobutyric acid receptor-associated protein' 15186.291 1 ? ? ? ;Gamma-aminobutyric acid receptor-associated protein (GABARAP) residues 3-116 N-terminally fused to the human UBA5 LIR motif (residues 340-351, EWGIELVSEVSE) ; 2 water nat water 18.015 137 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GABA(A) receptor-associated protein,MM46' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;EWGIELVSEVSEAMGFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKR IHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG ; _entity_poly.pdbx_seq_one_letter_code_can ;EWGIELVSEVSEAMGFVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKR IHLRAEDALFFFVNNVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 TRP n 1 3 GLY n 1 4 ILE n 1 5 GLU n 1 6 LEU n 1 7 VAL n 1 8 SER n 1 9 GLU n 1 10 VAL n 1 11 SER n 1 12 GLU n 1 13 ALA n 1 14 MET n 1 15 GLY n 1 16 PHE n 1 17 VAL n 1 18 TYR n 1 19 LYS n 1 20 GLU n 1 21 GLU n 1 22 HIS n 1 23 PRO n 1 24 PHE n 1 25 GLU n 1 26 LYS n 1 27 ARG n 1 28 ARG n 1 29 SER n 1 30 GLU n 1 31 GLY n 1 32 GLU n 1 33 LYS n 1 34 ILE n 1 35 ARG n 1 36 LYS n 1 37 LYS n 1 38 TYR n 1 39 PRO n 1 40 ASP n 1 41 ARG n 1 42 VAL n 1 43 PRO n 1 44 VAL n 1 45 ILE n 1 46 VAL n 1 47 GLU n 1 48 LYS n 1 49 ALA n 1 50 PRO n 1 51 LYS n 1 52 ALA n 1 53 ARG n 1 54 ILE n 1 55 GLY n 1 56 ASP n 1 57 LEU n 1 58 ASP n 1 59 LYS n 1 60 LYS n 1 61 LYS n 1 62 TYR n 1 63 LEU n 1 64 VAL n 1 65 PRO n 1 66 SER n 1 67 ASP n 1 68 LEU n 1 69 THR n 1 70 VAL n 1 71 GLY n 1 72 GLN n 1 73 PHE n 1 74 TYR n 1 75 PHE n 1 76 LEU n 1 77 ILE n 1 78 ARG n 1 79 LYS n 1 80 ARG n 1 81 ILE n 1 82 HIS n 1 83 LEU n 1 84 ARG n 1 85 ALA n 1 86 GLU n 1 87 ASP n 1 88 ALA n 1 89 LEU n 1 90 PHE n 1 91 PHE n 1 92 PHE n 1 93 VAL n 1 94 ASN n 1 95 ASN n 1 96 VAL n 1 97 ILE n 1 98 PRO n 1 99 PRO n 1 100 THR n 1 101 SER n 1 102 ALA n 1 103 THR n 1 104 MET n 1 105 GLY n 1 106 GLN n 1 107 LEU n 1 108 TYR n 1 109 GLN n 1 110 GLU n 1 111 HIS n 1 112 HIS n 1 113 GLU n 1 114 GLU n 1 115 ASP n 1 116 PHE n 1 117 PHE n 1 118 LEU n 1 119 TYR n 1 120 ILE n 1 121 ALA n 1 122 TYR n 1 123 SER n 1 124 ASP n 1 125 GLU n 1 126 SER n 1 127 VAL n 1 128 TYR n 1 129 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 129 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'GABARAP, FLC3B, HT004' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GBRAP_HUMAN _struct_ref.pdbx_db_accession O95166 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;FVYKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFFFVNN VIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYG ; _struct_ref.pdbx_align_begin 3 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6HB9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 16 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 129 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O95166 _struct_ref_seq.db_align_beg 3 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 116 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 3 _struct_ref_seq.pdbx_auth_seq_align_end 116 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6HB9 GLU A 1 ? UNP O95166 ? ? 'expression tag' -12 1 1 6HB9 TRP A 2 ? UNP O95166 ? ? 'expression tag' -11 2 1 6HB9 GLY A 3 ? UNP O95166 ? ? 'expression tag' -10 3 1 6HB9 ILE A 4 ? UNP O95166 ? ? 'expression tag' -9 4 1 6HB9 GLU A 5 ? UNP O95166 ? ? 'expression tag' -8 5 1 6HB9 LEU A 6 ? UNP O95166 ? ? 'expression tag' -7 6 1 6HB9 VAL A 7 ? UNP O95166 ? ? 'expression tag' -6 7 1 6HB9 SER A 8 ? UNP O95166 ? ? 'expression tag' -5 8 1 6HB9 GLU A 9 ? UNP O95166 ? ? 'expression tag' -4 9 1 6HB9 VAL A 10 ? UNP O95166 ? ? 'expression tag' -3 10 1 6HB9 SER A 11 ? UNP O95166 ? ? 'expression tag' -2 11 1 6HB9 GLU A 12 ? UNP O95166 ? ? 'expression tag' -1 12 1 6HB9 ALA A 13 ? UNP O95166 ? ? 'expression tag' 0 13 1 6HB9 MET A 14 ? UNP O95166 ? ? 'expression tag' 1 14 1 6HB9 GLY A 15 ? UNP O95166 ? ? 'expression tag' 2 15 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6HB9 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.32 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.90 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1.6 M sodium phosphate, 0.1 M HEPES, pH7.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 77 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 S 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-08-22 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate 11.210 _reflns.entry_id 6HB9 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.3 _reflns.d_resolution_low 35.94 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 32955 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.4 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.3 _reflns_shell.d_res_low 1.37 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 74.340 _refine.B_iso_mean 18.8336 _refine.B_iso_min 4.490 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6HB9 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.3000 _refine.ls_d_res_low 33.3270 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 32909 _refine.ls_number_reflns_R_free 1666 _refine.ls_number_reflns_R_work 31243 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.5000 _refine.ls_percent_reflns_R_free 5.0600 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1911 _refine.ls_R_factor_R_free 0.2132 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1899 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.380 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 25.0500 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1300 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.3000 _refine_hist.d_res_low 33.3270 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 137 _refine_hist.number_atoms_total 1207 _refine_hist.pdbx_number_residues_total 129 _refine_hist.pdbx_B_iso_mean_solvent 29.71 _refine_hist.pdbx_number_atoms_protein 1070 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 1123 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.111 ? 1519 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.050 ? 156 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 198 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 13.395 ? 426 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.3000 1.3383 2550 . 112 2438 91.0000 . . . 0.3001 0.0000 0.2796 . . . . . . 12 . . . 'X-RAY DIFFRACTION' 1.3383 1.3815 2590 . 141 2449 93.0000 . . . 0.2960 0.0000 0.2755 . . . . . . 12 . . . 'X-RAY DIFFRACTION' 1.3815 1.4308 2665 . 127 2538 94.0000 . . . 0.2681 0.0000 0.2825 . . . . . . 12 . . . 'X-RAY DIFFRACTION' 1.4308 1.4881 2667 . 130 2537 94.0000 . . . 0.2952 0.0000 0.2815 . . . . . . 12 . . . 'X-RAY DIFFRACTION' 1.4881 1.5558 2733 . 121 2612 97.0000 . . . 0.2615 0.0000 0.2478 . . . . . . 12 . . . 'X-RAY DIFFRACTION' 1.5558 1.6379 2791 . 149 2642 98.0000 . . . 0.2138 0.0000 0.1897 . . . . . . 12 . . . 'X-RAY DIFFRACTION' 1.6379 1.7405 2778 . 144 2634 98.0000 . . . 0.2064 0.0000 0.1849 . . . . . . 12 . . . 'X-RAY DIFFRACTION' 1.7405 1.8749 2810 . 150 2660 99.0000 . . . 0.2308 0.0000 0.1777 . . . . . . 12 . . . 'X-RAY DIFFRACTION' 1.8749 2.0635 2827 . 141 2686 99.0000 . . . 0.1795 0.0000 0.1681 . . . . . . 12 . . . 'X-RAY DIFFRACTION' 2.0635 2.3620 2792 . 141 2651 98.0000 . . . 0.1995 0.0000 0.1733 . . . . . . 12 . . . 'X-RAY DIFFRACTION' 2.3620 2.9756 2851 . 151 2700 99.0000 . . . 0.1791 0.0000 0.1956 . . . . . . 12 . . . 'X-RAY DIFFRACTION' 2.9756 33.3383 2855 . 159 2696 98.0000 . . . 0.2097 0.0000 0.1613 . . . . . . 12 . . . # _struct.entry_id 6HB9 _struct.title 'Crystal structure of the GABARAP in complex with the UBA5 LIR motif' _struct.pdbx_descriptor 'CTD nuclear envelope phosphatase 1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6HB9 _struct_keywords.text 'GABARAP, UBA5 LIR motif, complex, SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PHE A 16 ? HIS A 22 ? PHE A 3 HIS A 9 1 ? 7 HELX_P HELX_P2 AA2 PRO A 23 ? TYR A 38 ? PRO A 10 TYR A 25 1 ? 16 HELX_P HELX_P3 AA3 THR A 69 ? ILE A 81 ? THR A 56 ILE A 68 1 ? 13 HELX_P HELX_P4 AA4 THR A 103 ? HIS A 112 ? THR A 90 HIS A 99 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 62 ? PRO A 65 ? TYR A 49 PRO A 52 AA1 2 ARG A 41 ? LYS A 48 ? ARG A 28 LYS A 35 AA1 3 LEU A 118 ? SER A 123 ? LEU A 105 SER A 110 AA1 4 PHE A 90 ? PHE A 92 ? PHE A 77 PHE A 79 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 64 ? O VAL A 51 N VAL A 42 ? N VAL A 29 AA1 2 3 N ILE A 45 ? N ILE A 32 O LEU A 118 ? O LEU A 105 AA1 3 4 O SER A 123 ? O SER A 110 N PHE A 90 ? N PHE A 77 # _atom_sites.entry_id 6HB9 _atom_sites.fract_transf_matrix[1][1] 0.029607 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004874 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017238 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027826 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 -12 -12 GLU GLU A . n A 1 2 TRP 2 -11 -11 TRP TRP A . n A 1 3 GLY 3 -10 -10 GLY GLY A . n A 1 4 ILE 4 -9 -9 ILE ILE A . n A 1 5 GLU 5 -8 -8 GLU GLU A . n A 1 6 LEU 6 -7 -7 LEU LEU A . n A 1 7 VAL 7 -6 -6 VAL VAL A . n A 1 8 SER 8 -5 -5 SER SER A . n A 1 9 GLU 9 -4 -4 GLU GLU A . n A 1 10 VAL 10 -3 -3 VAL VAL A . n A 1 11 SER 11 -2 -2 SER SER A . n A 1 12 GLU 12 -1 -1 GLU GLU A . n A 1 13 ALA 13 0 0 ALA ALA A . n A 1 14 MET 14 1 1 MET MET A . n A 1 15 GLY 15 2 2 GLY GLY A . n A 1 16 PHE 16 3 3 PHE PHE A . n A 1 17 VAL 17 4 4 VAL VAL A . n A 1 18 TYR 18 5 5 TYR TYR A . n A 1 19 LYS 19 6 6 LYS LYS A . n A 1 20 GLU 20 7 7 GLU GLU A . n A 1 21 GLU 21 8 8 GLU GLU A . n A 1 22 HIS 22 9 9 HIS HIS A . n A 1 23 PRO 23 10 10 PRO PRO A . n A 1 24 PHE 24 11 11 PHE PHE A . n A 1 25 GLU 25 12 12 GLU GLU A . n A 1 26 LYS 26 13 13 LYS LYS A . n A 1 27 ARG 27 14 14 ARG ARG A . n A 1 28 ARG 28 15 15 ARG ARG A . n A 1 29 SER 29 16 16 SER SER A . n A 1 30 GLU 30 17 17 GLU GLU A . n A 1 31 GLY 31 18 18 GLY GLY A . n A 1 32 GLU 32 19 19 GLU GLU A . n A 1 33 LYS 33 20 20 LYS LYS A . n A 1 34 ILE 34 21 21 ILE ILE A . n A 1 35 ARG 35 22 22 ARG ARG A . n A 1 36 LYS 36 23 23 LYS LYS A . n A 1 37 LYS 37 24 24 LYS LYS A . n A 1 38 TYR 38 25 25 TYR TYR A . n A 1 39 PRO 39 26 26 PRO PRO A . n A 1 40 ASP 40 27 27 ASP ASP A . n A 1 41 ARG 41 28 28 ARG ARG A . n A 1 42 VAL 42 29 29 VAL VAL A . n A 1 43 PRO 43 30 30 PRO PRO A . n A 1 44 VAL 44 31 31 VAL VAL A . n A 1 45 ILE 45 32 32 ILE ILE A . n A 1 46 VAL 46 33 33 VAL VAL A . n A 1 47 GLU 47 34 34 GLU GLU A . n A 1 48 LYS 48 35 35 LYS LYS A . n A 1 49 ALA 49 36 36 ALA ALA A . n A 1 50 PRO 50 37 37 PRO PRO A . n A 1 51 LYS 51 38 38 LYS LYS A . n A 1 52 ALA 52 39 39 ALA ALA A . n A 1 53 ARG 53 40 40 ARG ARG A . n A 1 54 ILE 54 41 41 ILE ILE A . n A 1 55 GLY 55 42 42 GLY GLY A . n A 1 56 ASP 56 43 43 ASP ASP A . n A 1 57 LEU 57 44 44 LEU LEU A . n A 1 58 ASP 58 45 45 ASP ASP A . n A 1 59 LYS 59 46 46 LYS LYS A . n A 1 60 LYS 60 47 47 LYS LYS A . n A 1 61 LYS 61 48 48 LYS LYS A . n A 1 62 TYR 62 49 49 TYR TYR A . n A 1 63 LEU 63 50 50 LEU LEU A . n A 1 64 VAL 64 51 51 VAL VAL A . n A 1 65 PRO 65 52 52 PRO PRO A . n A 1 66 SER 66 53 53 SER SER A . n A 1 67 ASP 67 54 54 ASP ASP A . n A 1 68 LEU 68 55 55 LEU LEU A . n A 1 69 THR 69 56 56 THR THR A . n A 1 70 VAL 70 57 57 VAL VAL A . n A 1 71 GLY 71 58 58 GLY GLY A . n A 1 72 GLN 72 59 59 GLN GLN A . n A 1 73 PHE 73 60 60 PHE PHE A . n A 1 74 TYR 74 61 61 TYR TYR A . n A 1 75 PHE 75 62 62 PHE PHE A . n A 1 76 LEU 76 63 63 LEU LEU A . n A 1 77 ILE 77 64 64 ILE ILE A . n A 1 78 ARG 78 65 65 ARG ARG A . n A 1 79 LYS 79 66 66 LYS LYS A . n A 1 80 ARG 80 67 67 ARG ARG A . n A 1 81 ILE 81 68 68 ILE ILE A . n A 1 82 HIS 82 69 69 HIS HIS A . n A 1 83 LEU 83 70 70 LEU LEU A . n A 1 84 ARG 84 71 71 ARG ARG A . n A 1 85 ALA 85 72 72 ALA ALA A . n A 1 86 GLU 86 73 73 GLU GLU A . n A 1 87 ASP 87 74 74 ASP ASP A . n A 1 88 ALA 88 75 75 ALA ALA A . n A 1 89 LEU 89 76 76 LEU LEU A . n A 1 90 PHE 90 77 77 PHE PHE A . n A 1 91 PHE 91 78 78 PHE PHE A . n A 1 92 PHE 92 79 79 PHE PHE A . n A 1 93 VAL 93 80 80 VAL VAL A . n A 1 94 ASN 94 81 81 ASN ASN A . n A 1 95 ASN 95 82 82 ASN ASN A . n A 1 96 VAL 96 83 83 VAL VAL A . n A 1 97 ILE 97 84 84 ILE ILE A . n A 1 98 PRO 98 85 85 PRO PRO A . n A 1 99 PRO 99 86 86 PRO PRO A . n A 1 100 THR 100 87 87 THR THR A . n A 1 101 SER 101 88 88 SER SER A . n A 1 102 ALA 102 89 89 ALA ALA A . n A 1 103 THR 103 90 90 THR THR A . n A 1 104 MET 104 91 91 MET MET A . n A 1 105 GLY 105 92 92 GLY GLY A . n A 1 106 GLN 106 93 93 GLN GLN A . n A 1 107 LEU 107 94 94 LEU LEU A . n A 1 108 TYR 108 95 95 TYR TYR A . n A 1 109 GLN 109 96 96 GLN GLN A . n A 1 110 GLU 110 97 97 GLU GLU A . n A 1 111 HIS 111 98 98 HIS HIS A . n A 1 112 HIS 112 99 99 HIS HIS A . n A 1 113 GLU 113 100 100 GLU GLU A . n A 1 114 GLU 114 101 101 GLU GLU A . n A 1 115 ASP 115 102 102 ASP ASP A . n A 1 116 PHE 116 103 103 PHE PHE A . n A 1 117 PHE 117 104 104 PHE PHE A . n A 1 118 LEU 118 105 105 LEU LEU A . n A 1 119 TYR 119 106 106 TYR TYR A . n A 1 120 ILE 120 107 107 ILE ILE A . n A 1 121 ALA 121 108 108 ALA ALA A . n A 1 122 TYR 122 109 109 TYR TYR A . n A 1 123 SER 123 110 110 SER SER A . n A 1 124 ASP 124 111 111 ASP ASP A . n A 1 125 GLU 125 112 112 GLU GLU A . n A 1 126 SER 126 113 113 SER SER A . n A 1 127 VAL 127 114 114 VAL VAL A . n A 1 128 TYR 128 115 115 TYR TYR A . n A 1 129 GLY 129 116 116 GLY GLY A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 201 120 HOH HOH A . B 2 HOH 2 202 111 HOH HOH A . B 2 HOH 3 203 71 HOH HOH A . B 2 HOH 4 204 119 HOH HOH A . B 2 HOH 5 205 127 HOH HOH A . B 2 HOH 6 206 129 HOH HOH A . B 2 HOH 7 207 113 HOH HOH A . B 2 HOH 8 208 92 HOH HOH A . B 2 HOH 9 209 57 HOH HOH A . B 2 HOH 10 210 78 HOH HOH A . B 2 HOH 11 211 50 HOH HOH A . B 2 HOH 12 212 123 HOH HOH A . B 2 HOH 13 213 69 HOH HOH A . B 2 HOH 14 214 134 HOH HOH A . B 2 HOH 15 215 106 HOH HOH A . B 2 HOH 16 216 19 HOH HOH A . B 2 HOH 17 217 47 HOH HOH A . B 2 HOH 18 218 124 HOH HOH A . B 2 HOH 19 219 90 HOH HOH A . B 2 HOH 20 220 11 HOH HOH A . B 2 HOH 21 221 56 HOH HOH A . B 2 HOH 22 222 28 HOH HOH A . B 2 HOH 23 223 54 HOH HOH A . B 2 HOH 24 224 27 HOH HOH A . B 2 HOH 25 225 8 HOH HOH A . B 2 HOH 26 226 70 HOH HOH A . B 2 HOH 27 227 15 HOH HOH A . B 2 HOH 28 228 102 HOH HOH A . B 2 HOH 29 229 21 HOH HOH A . B 2 HOH 30 230 83 HOH HOH A . B 2 HOH 31 231 23 HOH HOH A . B 2 HOH 32 232 33 HOH HOH A . B 2 HOH 33 233 77 HOH HOH A . B 2 HOH 34 234 22 HOH HOH A . B 2 HOH 35 235 2 HOH HOH A . B 2 HOH 36 236 3 HOH HOH A . B 2 HOH 37 237 76 HOH HOH A . B 2 HOH 38 238 12 HOH HOH A . B 2 HOH 39 239 1 HOH HOH A . B 2 HOH 40 240 36 HOH HOH A . B 2 HOH 41 241 93 HOH HOH A . B 2 HOH 42 242 55 HOH HOH A . B 2 HOH 43 243 95 HOH HOH A . B 2 HOH 44 244 32 HOH HOH A . B 2 HOH 45 245 18 HOH HOH A . B 2 HOH 46 246 29 HOH HOH A . B 2 HOH 47 247 74 HOH HOH A . B 2 HOH 48 248 115 HOH HOH A . B 2 HOH 49 249 26 HOH HOH A . B 2 HOH 50 250 40 HOH HOH A . B 2 HOH 51 251 131 HOH HOH A . B 2 HOH 52 252 20 HOH HOH A . B 2 HOH 53 253 80 HOH HOH A . B 2 HOH 54 254 138 HOH HOH A . B 2 HOH 55 255 6 HOH HOH A . B 2 HOH 56 256 103 HOH HOH A . B 2 HOH 57 257 44 HOH HOH A . B 2 HOH 58 258 24 HOH HOH A . B 2 HOH 59 259 121 HOH HOH A . B 2 HOH 60 260 31 HOH HOH A . B 2 HOH 61 261 61 HOH HOH A . B 2 HOH 62 262 51 HOH HOH A . B 2 HOH 63 263 132 HOH HOH A . B 2 HOH 64 264 105 HOH HOH A . B 2 HOH 65 265 52 HOH HOH A . B 2 HOH 66 266 16 HOH HOH A . B 2 HOH 67 267 100 HOH HOH A . B 2 HOH 68 268 79 HOH HOH A . B 2 HOH 69 269 110 HOH HOH A . B 2 HOH 70 270 17 HOH HOH A . B 2 HOH 71 271 72 HOH HOH A . B 2 HOH 72 272 35 HOH HOH A . B 2 HOH 73 273 42 HOH HOH A . B 2 HOH 74 274 9 HOH HOH A . B 2 HOH 75 275 48 HOH HOH A . B 2 HOH 76 276 101 HOH HOH A . B 2 HOH 77 277 81 HOH HOH A . B 2 HOH 78 278 107 HOH HOH A . B 2 HOH 79 279 60 HOH HOH A . B 2 HOH 80 280 37 HOH HOH A . B 2 HOH 81 281 13 HOH HOH A . B 2 HOH 82 282 7 HOH HOH A . B 2 HOH 83 283 39 HOH HOH A . B 2 HOH 84 284 104 HOH HOH A . B 2 HOH 85 285 126 HOH HOH A . B 2 HOH 86 286 14 HOH HOH A . B 2 HOH 87 287 84 HOH HOH A . B 2 HOH 88 288 43 HOH HOH A . B 2 HOH 89 289 118 HOH HOH A . B 2 HOH 90 290 30 HOH HOH A . B 2 HOH 91 291 82 HOH HOH A . B 2 HOH 92 292 58 HOH HOH A . B 2 HOH 93 293 64 HOH HOH A . B 2 HOH 94 294 137 HOH HOH A . B 2 HOH 95 295 125 HOH HOH A . B 2 HOH 96 296 5 HOH HOH A . B 2 HOH 97 297 136 HOH HOH A . B 2 HOH 98 298 38 HOH HOH A . B 2 HOH 99 299 67 HOH HOH A . B 2 HOH 100 300 46 HOH HOH A . B 2 HOH 101 301 89 HOH HOH A . B 2 HOH 102 302 59 HOH HOH A . B 2 HOH 103 303 108 HOH HOH A . B 2 HOH 104 304 25 HOH HOH A . B 2 HOH 105 305 49 HOH HOH A . B 2 HOH 106 306 122 HOH HOH A . B 2 HOH 107 307 4 HOH HOH A . B 2 HOH 108 308 10 HOH HOH A . B 2 HOH 109 309 41 HOH HOH A . B 2 HOH 110 310 73 HOH HOH A . B 2 HOH 111 311 139 HOH HOH A . B 2 HOH 112 312 34 HOH HOH A . B 2 HOH 113 313 109 HOH HOH A . B 2 HOH 114 314 88 HOH HOH A . B 2 HOH 115 315 75 HOH HOH A . B 2 HOH 116 316 63 HOH HOH A . B 2 HOH 117 317 117 HOH HOH A . B 2 HOH 118 318 133 HOH HOH A . B 2 HOH 119 319 65 HOH HOH A . B 2 HOH 120 320 87 HOH HOH A . B 2 HOH 121 321 53 HOH HOH A . B 2 HOH 122 322 96 HOH HOH A . B 2 HOH 123 323 114 HOH HOH A . B 2 HOH 124 324 66 HOH HOH A . B 2 HOH 125 325 128 HOH HOH A . B 2 HOH 126 326 142 HOH HOH A . B 2 HOH 127 327 99 HOH HOH A . B 2 HOH 128 328 140 HOH HOH A . B 2 HOH 129 329 45 HOH HOH A . B 2 HOH 130 330 112 HOH HOH A . B 2 HOH 131 331 98 HOH HOH A . B 2 HOH 132 332 97 HOH HOH A . B 2 HOH 133 333 85 HOH HOH A . B 2 HOH 134 334 68 HOH HOH A . B 2 HOH 135 335 135 HOH HOH A . B 2 HOH 136 336 130 HOH HOH A . B 2 HOH 137 337 141 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 7990 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-05-01 2 'Structure model' 1 1 2019-05-08 3 'Structure model' 1 2 2020-01-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 3 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.page_first' 2 2 'Structure model' '_citation.page_last' 3 3 'Structure model' '_citation.journal_volume' 4 3 'Structure model' '_citation.page_first' 5 3 'Structure model' '_citation.page_last' 6 3 'Structure model' '_citation.year' 7 3 'Structure model' '_citation_author.identifier_ORCID' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD1 A ASP 27 ? ? O A HOH 201 ? ? 1.89 2 1 O A HOH 215 ? ? O A HOH 274 ? ? 2.02 3 1 O A HOH 204 ? ? O A HOH 284 ? ? 2.03 4 1 O A HOH 204 ? ? O A HOH 228 ? ? 2.12 5 1 O A HOH 290 ? ? O A HOH 306 ? ? 2.12 6 1 OD2 A ASP 111 ? ? O A HOH 202 ? ? 2.13 7 1 O A HOH 204 ? ? O A HOH 256 ? ? 2.15 8 1 O A HOH 233 ? ? O A HOH 269 ? ? 2.16 9 1 NZ A LYS 66 ? ? O A HOH 203 ? ? 2.18 10 1 NE2 A HIS 99 ? ? O A HOH 204 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 289 ? ? 1_555 O A HOH 303 ? ? 1_455 1.99 2 1 O A HOH 204 ? ? 1_555 O A HOH 264 ? ? 1_655 2.07 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ARG _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 40 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -103.11 _pdbx_validate_torsion.psi 59.91 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU -12 ? CG ? A GLU 1 CG 2 1 Y 1 A GLU -12 ? CD ? A GLU 1 CD 3 1 Y 1 A GLU -12 ? OE1 ? A GLU 1 OE1 4 1 Y 1 A GLU -12 ? OE2 ? A GLU 1 OE2 # _pdbx_audit_support.funding_organization ? _pdbx_audit_support.country Germany _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'isothermal titration calorimetry' _pdbx_struct_assembly_auth_evidence.details ? #