HEADER FLAVOPROTEIN 14-AUG-18 6HCE TITLE CRYSTAL STRUCTURE OF CHICKEN RIBOFLAVIN BINDING PROTEIN IN "APO" FORM TITLE 2 AT 2.5 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOFLAVIN-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RBP SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031 KEYWDS CHICKEN EGG, RIBOFLAVIN, TRANSPORT, FLAVOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.I.LOCH,J.LIPOWSKA,K.LEWINSKI REVDAT 3 17-JAN-24 6HCE 1 HETSYN REVDAT 2 29-JUL-20 6HCE 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE REVDAT 1 29-AUG-18 6HCE 0 JRNL AUTH J.I.LOCH,J.LIPOWSKA,K.LEWINSKI JRNL TITL CRYSTAL STRUCTURE OF CHICKEN RIBOFLAVIN BINDING PROTEIN IN JRNL TITL 2 "APO" FORM AT 2.5 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 16212 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1237 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1175 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.37 REMARK 3 BIN R VALUE (WORKING SET) : 0.2880 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.3900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1601 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 91 REMARK 3 SOLVENT ATOMS : 160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : 0.09000 REMARK 3 B12 (A**2) : -0.01000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.216 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.202 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.135 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.496 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.912 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1758 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1531 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2376 ; 1.269 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3559 ; 0.768 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 206 ; 6.455 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 82 ;38.320 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 291 ;13.982 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;18.010 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 246 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1920 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 388 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 809 ; 4.814 ; 1.893 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 805 ; 4.322 ; 1.877 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1006 ; 5.510 ; 2.813 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1007 ; 5.509 ; 2.818 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 949 ;10.566 ; 2.776 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 949 ;10.565 ; 2.776 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1367 ;10.651 ; 3.831 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2083 ;10.937 ;17.159 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2074 ;10.934 ;17.064 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 21 A 99 REMARK 3 ORIGIN FOR THE GROUP (A): 93.4200 61.2570 26.1250 REMARK 3 T TENSOR REMARK 3 T11: 0.0241 T22: 0.1362 REMARK 3 T33: 0.0190 T12: -0.0497 REMARK 3 T13: 0.0047 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 1.9315 L22: 0.4656 REMARK 3 L33: 1.8448 L12: 0.9144 REMARK 3 L13: 0.1138 L23: 0.1444 REMARK 3 S TENSOR REMARK 3 S11: -0.0945 S12: 0.1792 S13: 0.1239 REMARK 3 S21: -0.0621 S22: 0.1116 S23: 0.0401 REMARK 3 S31: 0.0634 S32: -0.3184 S33: -0.0171 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 100 A 131 REMARK 3 ORIGIN FOR THE GROUP (A): 91.2920 62.9120 40.1970 REMARK 3 T TENSOR REMARK 3 T11: 0.1396 T22: 0.1813 REMARK 3 T33: 0.1125 T12: -0.0704 REMARK 3 T13: 0.0154 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 3.0426 L22: 1.3416 REMARK 3 L33: 3.4925 L12: 1.5148 REMARK 3 L13: -0.1062 L23: 0.2448 REMARK 3 S TENSOR REMARK 3 S11: 0.1528 S12: -0.3389 S13: 0.0919 REMARK 3 S21: 0.0722 S22: -0.1013 S23: 0.2630 REMARK 3 S31: -0.0835 S32: -0.3964 S33: -0.0515 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 132 A 154 REMARK 3 ORIGIN FOR THE GROUP (A): 105.7940 72.0270 35.7650 REMARK 3 T TENSOR REMARK 3 T11: 0.0869 T22: 0.0187 REMARK 3 T33: 0.0603 T12: -0.0022 REMARK 3 T13: -0.0277 T23: 0.0066 REMARK 3 L TENSOR REMARK 3 L11: 2.7778 L22: 4.3778 REMARK 3 L33: 9.3069 L12: 0.3213 REMARK 3 L13: 0.2193 L23: -0.5593 REMARK 3 S TENSOR REMARK 3 S11: 0.0368 S12: 0.1266 S13: 0.2680 REMARK 3 S21: -0.1682 S22: 0.0878 S23: 0.0346 REMARK 3 S31: -0.2654 S32: -0.1524 S33: -0.1246 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 155 A 188 REMARK 3 ORIGIN FOR THE GROUP (A): 93.9540 61.4370 44.8090 REMARK 3 T TENSOR REMARK 3 T11: 0.1002 T22: 0.0925 REMARK 3 T33: 0.0295 T12: -0.0441 REMARK 3 T13: 0.0168 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 3.8256 L22: 0.9161 REMARK 3 L33: 1.9487 L12: 1.6027 REMARK 3 L13: 1.6760 L23: 0.7227 REMARK 3 S TENSOR REMARK 3 S11: 0.0611 S12: -0.3667 S13: 0.1223 REMARK 3 S21: 0.1384 S22: -0.1644 S23: 0.1086 REMARK 3 S31: 0.1582 S32: -0.3652 S33: 0.1032 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 189 A 215 REMARK 3 ORIGIN FOR THE GROUP (A): 76.6440 55.3500 39.1490 REMARK 3 T TENSOR REMARK 3 T11: 0.1007 T22: 0.3120 REMARK 3 T33: 0.1296 T12: -0.1066 REMARK 3 T13: 0.0395 T23: -0.0262 REMARK 3 L TENSOR REMARK 3 L11: 11.9696 L22: 5.0923 REMARK 3 L33: 6.7690 L12: -1.2988 REMARK 3 L13: -0.7397 L23: 0.0679 REMARK 3 S TENSOR REMARK 3 S11: 0.1833 S12: -0.1785 S13: 0.7989 REMARK 3 S21: 0.1624 S22: -0.0974 S23: 0.5262 REMARK 3 S31: -0.0818 S32: -1.0613 S33: -0.0858 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 216 A 231 REMARK 3 ORIGIN FOR THE GROUP (A): 75.4820 45.9000 40.4160 REMARK 3 T TENSOR REMARK 3 T11: 0.3092 T22: 0.2090 REMARK 3 T33: 0.1952 T12: -0.1898 REMARK 3 T13: -0.1104 T23: 0.1197 REMARK 3 L TENSOR REMARK 3 L11: 7.7730 L22: 15.4832 REMARK 3 L33: 10.7333 L12: -2.0800 REMARK 3 L13: 3.2150 L23: 10.9318 REMARK 3 S TENSOR REMARK 3 S11: 0.3029 S12: -0.5183 S13: -0.9527 REMARK 3 S21: 0.1147 S22: -0.0947 S23: 0.5696 REMARK 3 S31: 0.4327 S32: -0.4766 S33: -0.2082 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6HCE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1200011420. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : OXFORD DIFFRACTION SUPERNOVA REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : AGILENT ATLAS CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSALISPRO REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.3.11 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17468 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 15.440 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.13500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.56700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4KMZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.5 M AMMONIUM SULFATE, 100 MM HEPES; REMARK 280 PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.75267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 23.87633 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 23.87633 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 47.75267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 465 ARG A 3 REMARK 465 PHE A 4 REMARK 465 ALA A 5 REMARK 465 ILE A 6 REMARK 465 THR A 7 REMARK 465 LEU A 8 REMARK 465 PHE A 9 REMARK 465 ALA A 10 REMARK 465 VAL A 11 REMARK 465 ILE A 12 REMARK 465 THR A 13 REMARK 465 SER A 14 REMARK 465 SER A 15 REMARK 465 THR A 16 REMARK 465 CYS A 17 REMARK 465 GLN A 18 REMARK 465 GLN A 19 REMARK 465 TYR A 20 REMARK 465 SER A 202 REMARK 465 GLU A 203 REMARK 465 SEP A 204 REMARK 465 SEP A 205 REMARK 465 GLU A 206 REMARK 465 GLU A 207 REMARK 465 SEP A 208 REMARK 465 SEP A 209 REMARK 465 SEP A 210 REMARK 465 MET A 211 REMARK 465 SEP A 212 REMARK 465 GLU A 232 REMARK 465 GLU A 233 REMARK 465 GLY A 234 REMARK 465 GLU A 235 REMARK 465 GLU A 236 REMARK 465 ARG A 237 REMARK 465 ARG A 238 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 24 54.66 -99.94 REMARK 500 SER A 47 104.04 -161.23 REMARK 500 SER A 67 -117.02 57.63 REMARK 500 ASP A 140 39.88 -87.91 REMARK 500 REMARK 500 REMARK: NULL DBREF 6HCE A 1 238 UNP P02752 RBP_CHICK 1 238 SEQRES 1 A 238 MET LEU ARG PHE ALA ILE THR LEU PHE ALA VAL ILE THR SEQRES 2 A 238 SER SER THR CYS GLN GLN TYR GLY CYS LEU GLU GLY ASP SEQRES 3 A 238 THR HIS LYS ALA ASN PRO SER PRO GLU PRO ASN MET HIS SEQRES 4 A 238 GLU CYS THR LEU TYR SER GLU SER SER CYS CYS TYR ALA SEQRES 5 A 238 ASN PHE THR GLU GLN LEU ALA HIS SER PRO ILE ILE LYS SEQRES 6 A 238 VAL SER ASN SER TYR TRP ASN ARG CYS GLY GLN LEU SER SEQRES 7 A 238 LYS SER CYS GLU ASP PHE THR LYS LYS ILE GLU CYS PHE SEQRES 8 A 238 TYR ARG CYS SER PRO HIS ALA ALA ARG TRP ILE ASP PRO SEQRES 9 A 238 ARG TYR THR ALA ALA ILE GLN SER VAL PRO LEU CYS GLN SEQRES 10 A 238 SER PHE CYS ASP ASP TRP TYR GLU ALA CYS LYS ASP ASP SEQRES 11 A 238 SER ILE CYS ALA HIS ASN TRP LEU THR ASP TRP GLU ARG SEQRES 12 A 238 ASP GLU SER GLY GLU ASN HIS CYS LYS SER LYS CYS VAL SEQRES 13 A 238 PRO TYR SER GLU MET TYR ALA ASN GLY THR ASP MET CYS SEQRES 14 A 238 GLN SER MET TRP GLY GLU SER PHE LYS VAL SER GLU SER SEQRES 15 A 238 SER CYS LEU CYS LEU GLN MET ASN LYS LYS ASP MET VAL SEQRES 16 A 238 ALA ILE LYS HIS LEU LEU SER GLU SEP SEP GLU GLU SEP SEQRES 17 A 238 SEP SEP MET SEP SEP SEP GLU GLU HIS ALA CYS GLN LYS SEQRES 18 A 238 LYS LEU LEU LYS PHE GLU ALA LEU GLN GLN GLU GLU GLY SEQRES 19 A 238 GLU GLU ARG ARG MODRES 6HCE SEP A 213 SER MODIFIED RESIDUE MODRES 6HCE SEP A 214 SER MODIFIED RESIDUE HET SEP A 213 10 HET SEP A 214 10 HET NAG A 301 14 HET NAG A 302 14 HET GOL A 303 6 HET GOL A 304 6 HET GOL A 305 6 HET GOL A 306 6 HET GOL A 307 6 HET SO4 A 308 5 HET SO4 A 309 5 HET SO4 A 310 5 HET ACT A 311 4 HET ACT A 312 4 HET ACT A 313 4 HET CL A 314 1 HET CL A 315 1 HET EDO A 316 4 HETNAM SEP PHOSPHOSERINE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM ACT ACETATE ION HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN SEP PHOSPHONOSERINE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 SEP 2(C3 H8 N O6 P) FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 4 GOL 5(C3 H8 O3) FORMUL 9 SO4 3(O4 S 2-) FORMUL 12 ACT 3(C2 H3 O2 1-) FORMUL 15 CL 2(CL 1-) FORMUL 17 EDO C2 H6 O2 FORMUL 18 HOH *160(H2 O) HELIX 1 AA1 CYS A 41 SER A 45 5 5 HELIX 2 AA2 TYR A 51 GLN A 57 1 7 HELIX 3 AA3 SER A 78 SER A 95 1 18 HELIX 4 AA4 HIS A 97 ARG A 100 5 4 HELIX 5 AA5 CYS A 116 LYS A 128 1 13 HELIX 6 AA6 TYR A 158 TYR A 162 1 5 HELIX 7 AA7 ASN A 164 MET A 172 1 9 HELIX 8 AA8 TRP A 173 GLU A 175 5 3 HELIX 9 AA9 LYS A 192 LEU A 201 1 10 HELIX 10 AB1 SEP A 214 GLN A 230 1 17 SHEET 1 AA1 2 LYS A 65 VAL A 66 0 SHEET 2 AA1 2 SER A 69 TYR A 70 -1 O SER A 69 N VAL A 66 SHEET 1 AA2 2 ILE A 102 ASP A 103 0 SHEET 2 AA2 2 TYR A 106 ILE A 110 -1 O ALA A 109 N ASP A 103 SHEET 1 AA3 2 VAL A 113 LEU A 115 0 SHEET 2 AA3 2 PHE A 177 VAL A 179 1 O LYS A 178 N LEU A 115 SHEET 1 AA4 2 SER A 131 ILE A 132 0 SHEET 2 AA4 2 VAL A 156 PRO A 157 -1 O VAL A 156 N ILE A 132 SHEET 1 AA5 2 TRP A 141 ARG A 143 0 SHEET 2 AA5 2 ASN A 149 CYS A 151 -1 O HIS A 150 N GLU A 142 SSBOND 1 CYS A 22 CYS A 49 1555 1555 2.04 SSBOND 2 CYS A 41 CYS A 90 1555 1555 2.05 SSBOND 3 CYS A 50 CYS A 94 1555 1555 2.03 SSBOND 4 CYS A 74 CYS A 155 1555 1555 2.04 SSBOND 5 CYS A 81 CYS A 127 1555 1555 2.06 SSBOND 6 CYS A 116 CYS A 186 1555 1555 2.02 SSBOND 7 CYS A 120 CYS A 169 1555 1555 2.03 SSBOND 8 CYS A 133 CYS A 151 1555 1555 2.02 SSBOND 9 CYS A 184 CYS A 219 1555 1555 2.03 LINK ND2 ASN A 53 C1 NAG A 302 1555 1555 1.51 LINK ND2 ASN A 164 C1 NAG A 301 1555 1555 1.54 LINK C SEP A 213 N SEP A 214 1555 1555 1.33 LINK C SEP A 214 N GLU A 215 1555 1555 1.33 CISPEP 1 SER A 61 PRO A 62 0 6.24 CRYST1 110.008 110.008 71.629 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009090 0.005248 0.000000 0.00000 SCALE2 0.000000 0.010497 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013961 0.00000