HEADER TRANSFERASE 17-AUG-18 6HD4 TITLE ABL1 IN COMPLEX WITH COMPOUND 7 AND IMATINIB (STI-571) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE ABL1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: KINASE DOMAIN; COMPND 5 SYNONYM: ABELSON MURINE LEUKEMIA VIRAL ONCOGENE HOMOLOG 1,ABELSON COMPND 6 TYROSINE-PROTEIN KINASE 1,PROTO-ONCOGENE C-ABL,P150; COMPND 7 EC: 2.7.10.2; COMPND 8 ENGINEERED: YES; COMPND 9 OTHER_DETAILS: THE ELECTRON DENSITY FOR THE REGION A294-A297 IS POOR COMPND 10 AND A GOOD FIT COULD NOT BE FOUND SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: ABL1, ABL; SOURCE 6 EXPRESSION_SYSTEM: BACULOVIRUS EXPRESSION VECTOR PFASTBAC1-HM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 274590 KEYWDS PHOSPHOTRANSFERASE, INHIBITOR COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.W.COWAN-JACOB REVDAT 2 17-JAN-24 6HD4 1 HETSYN REVDAT 1 24-OCT-18 6HD4 0 JRNL AUTH J.SCHOEPFER,W.JAHNKE,G.BERELLINI,S.BUONAMICI,S.COTESTA, JRNL AUTH 2 S.W.COWAN-JACOB,S.DODD,P.DRUECKES,D.FABBRO,T.GABRIEL, JRNL AUTH 3 J.M.GROELL,R.M.GROTZFELD,A.Q.HASSAN,C.HENRY,V.IYER,D.JONES, JRNL AUTH 4 F.LOMBARDO,A.LOO,P.W.MANLEY,X.PELLE,G.RUMMEL,B.SALEM, JRNL AUTH 5 M.WARMUTH,A.A.WYLIE,T.ZOLLER,A.L.MARZINZIK,P.FURET JRNL TITL DISCOVERY OF ASCIMINIB (ABL001), AN ALLOSTERIC INHIBITOR OF JRNL TITL 2 THE TYROSINE KINASE ACTIVITY OF BCR-ABL1. JRNL REF J. MED. CHEM. V. 61 8120 2018 JRNL REFN ISSN 1520-4804 JRNL PMID 30137981 JRNL DOI 10.1021/ACS.JMEDCHEM.8B01040 REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.9.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 92.8 REMARK 3 NUMBER OF REFLECTIONS : 39685 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1985 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.08 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.82 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2782 REMARK 3 BIN R VALUE (WORKING SET) : 0.2043 REMARK 3 BIN FREE R VALUE : 0.2600 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.02 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 147 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4624 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 145 REMARK 3 SOLVENT ATOMS : 384 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.50170 REMARK 3 B22 (A**2) : 3.67940 REMARK 3 B33 (A**2) : -3.17780 REMARK 3 B12 (A**2) : -1.29210 REMARK 3 B13 (A**2) : -3.23880 REMARK 3 B23 (A**2) : -0.67220 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.223 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : NULL ; NULL ; NULL REMARK 3 BOND ANGLES : NULL ; NULL ; NULL REMARK 3 TORSION ANGLES : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS : NULL ; NULL ; NULL REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : NULL ; NULL ; NULL REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : NULL ; NULL ; NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : NULL REMARK 3 OTHER TORSION ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6HD4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1200011500. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-AUG-10 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39687 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 62.120 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.7 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : 0.03100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.8200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.8 REMARK 200 DATA REDUNDANCY IN SHELL : 1.81 REMARK 200 R MERGE FOR SHELL (I) : 0.18700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.080 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 1OPJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20.0 % PEG 4000, 0.2 M MGCL2, 0.1 M REMARK 280 MES PH 5.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 296 REMARK 465 GLY A 530 REMARK 465 LYS A 531 REMARK 465 ARG A 532 REMARK 465 GLY A 533 REMARK 465 THR A 534 REMARK 465 GLY B 242 REMARK 465 ALA B 243 REMARK 465 GLU B 294 REMARK 465 ASP B 295 REMARK 465 THR B 296 REMARK 465 GLY B 530 REMARK 465 LYS B 531 REMARK 465 ARG B 532 REMARK 465 GLY B 533 REMARK 465 THR B 534 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 264 -152.43 -112.13 REMARK 500 GLU A 298 0.45 -57.95 REMARK 500 ARG A 381 -19.16 88.06 REMARK 500 ASP A 382 52.38 -147.81 REMARK 500 TRP A 495 30.02 -98.00 REMARK 500 LYS B 264 -136.15 -95.43 REMARK 500 ARG B 381 -16.91 86.14 REMARK 500 ASP B 382 52.73 -148.76 REMARK 500 ALA B 418 -163.90 -108.41 REMARK 500 PHE B 516 57.49 -102.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FYW A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue STI A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FYW B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue STI B 602 DBREF 6HD4 A 248 534 UNP P00520 ABL1_MOUSE 229 515 DBREF 6HD4 B 248 534 UNP P00520 ABL1_MOUSE 229 515 SEQADV 6HD4 GLY A 242 UNP P00520 EXPRESSION TAG SEQADV 6HD4 ALA A 243 UNP P00520 EXPRESSION TAG SEQADV 6HD4 MET A 244 UNP P00520 EXPRESSION TAG SEQADV 6HD4 ASP A 245 UNP P00520 EXPRESSION TAG SEQADV 6HD4 PRO A 246 UNP P00520 EXPRESSION TAG SEQADV 6HD4 SER A 247 UNP P00520 EXPRESSION TAG SEQADV 6HD4 GLY B 242 UNP P00520 EXPRESSION TAG SEQADV 6HD4 ALA B 243 UNP P00520 EXPRESSION TAG SEQADV 6HD4 MET B 244 UNP P00520 EXPRESSION TAG SEQADV 6HD4 ASP B 245 UNP P00520 EXPRESSION TAG SEQADV 6HD4 PRO B 246 UNP P00520 EXPRESSION TAG SEQADV 6HD4 SER B 247 UNP P00520 EXPRESSION TAG SEQRES 1 A 293 GLY ALA MET ASP PRO SER SER PRO ASN TYR ASP LYS TRP SEQRES 2 A 293 GLU MET GLU ARG THR ASP ILE THR MET LYS HIS LYS LEU SEQRES 3 A 293 GLY GLY GLY GLN TYR GLY GLU VAL TYR GLU GLY VAL TRP SEQRES 4 A 293 LYS LYS TYR SER LEU THR VAL ALA VAL LYS THR LEU LYS SEQRES 5 A 293 GLU ASP THR MET GLU VAL GLU GLU PHE LEU LYS GLU ALA SEQRES 6 A 293 ALA VAL MET LYS GLU ILE LYS HIS PRO ASN LEU VAL GLN SEQRES 7 A 293 LEU LEU GLY VAL CYS THR ARG GLU PRO PRO PHE TYR ILE SEQRES 8 A 293 ILE THR GLU PHE MET THR TYR GLY ASN LEU LEU ASP TYR SEQRES 9 A 293 LEU ARG GLU CYS ASN ARG GLN GLU VAL SER ALA VAL VAL SEQRES 10 A 293 LEU LEU TYR MET ALA THR GLN ILE SER SER ALA MET GLU SEQRES 11 A 293 TYR LEU GLU LYS LYS ASN PHE ILE HIS ARG ASP LEU ALA SEQRES 12 A 293 ALA ARG ASN CYS LEU VAL GLY GLU ASN HIS LEU VAL LYS SEQRES 13 A 293 VAL ALA ASP PHE GLY LEU SER ARG LEU MET THR GLY ASP SEQRES 14 A 293 THR TYR THR ALA HIS ALA GLY ALA LYS PHE PRO ILE LYS SEQRES 15 A 293 TRP THR ALA PRO GLU SER LEU ALA TYR ASN LYS PHE SER SEQRES 16 A 293 ILE LYS SER ASP VAL TRP ALA PHE GLY VAL LEU LEU TRP SEQRES 17 A 293 GLU ILE ALA THR TYR GLY MET SER PRO TYR PRO GLY ILE SEQRES 18 A 293 ASP LEU SER GLN VAL TYR GLU LEU LEU GLU LYS ASP TYR SEQRES 19 A 293 ARG MET GLU ARG PRO GLU GLY CYS PRO GLU LYS VAL TYR SEQRES 20 A 293 GLU LEU MET ARG ALA CYS TRP GLN TRP ASN PRO SER ASP SEQRES 21 A 293 ARG PRO SER PHE ALA GLU ILE HIS GLN ALA PHE GLU THR SEQRES 22 A 293 MET PHE GLN GLU SER SER ILE SER ASP GLU VAL GLU LYS SEQRES 23 A 293 GLU LEU GLY LYS ARG GLY THR SEQRES 1 B 293 GLY ALA MET ASP PRO SER SER PRO ASN TYR ASP LYS TRP SEQRES 2 B 293 GLU MET GLU ARG THR ASP ILE THR MET LYS HIS LYS LEU SEQRES 3 B 293 GLY GLY GLY GLN TYR GLY GLU VAL TYR GLU GLY VAL TRP SEQRES 4 B 293 LYS LYS TYR SER LEU THR VAL ALA VAL LYS THR LEU LYS SEQRES 5 B 293 GLU ASP THR MET GLU VAL GLU GLU PHE LEU LYS GLU ALA SEQRES 6 B 293 ALA VAL MET LYS GLU ILE LYS HIS PRO ASN LEU VAL GLN SEQRES 7 B 293 LEU LEU GLY VAL CYS THR ARG GLU PRO PRO PHE TYR ILE SEQRES 8 B 293 ILE THR GLU PHE MET THR TYR GLY ASN LEU LEU ASP TYR SEQRES 9 B 293 LEU ARG GLU CYS ASN ARG GLN GLU VAL SER ALA VAL VAL SEQRES 10 B 293 LEU LEU TYR MET ALA THR GLN ILE SER SER ALA MET GLU SEQRES 11 B 293 TYR LEU GLU LYS LYS ASN PHE ILE HIS ARG ASP LEU ALA SEQRES 12 B 293 ALA ARG ASN CYS LEU VAL GLY GLU ASN HIS LEU VAL LYS SEQRES 13 B 293 VAL ALA ASP PHE GLY LEU SER ARG LEU MET THR GLY ASP SEQRES 14 B 293 THR TYR THR ALA HIS ALA GLY ALA LYS PHE PRO ILE LYS SEQRES 15 B 293 TRP THR ALA PRO GLU SER LEU ALA TYR ASN LYS PHE SER SEQRES 16 B 293 ILE LYS SER ASP VAL TRP ALA PHE GLY VAL LEU LEU TRP SEQRES 17 B 293 GLU ILE ALA THR TYR GLY MET SER PRO TYR PRO GLY ILE SEQRES 18 B 293 ASP LEU SER GLN VAL TYR GLU LEU LEU GLU LYS ASP TYR SEQRES 19 B 293 ARG MET GLU ARG PRO GLU GLY CYS PRO GLU LYS VAL TYR SEQRES 20 B 293 GLU LEU MET ARG ALA CYS TRP GLN TRP ASN PRO SER ASP SEQRES 21 B 293 ARG PRO SER PHE ALA GLU ILE HIS GLN ALA PHE GLU THR SEQRES 22 B 293 MET PHE GLN GLU SER SER ILE SER ASP GLU VAL GLU LYS SEQRES 23 B 293 GLU LEU GLY LYS ARG GLY THR HET GOL A 601 6 HET CL A 602 1 HET FYW A 603 64 HET STI A 604 37 HET FYW B 601 64 HET STI B 602 37 HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETNAM FYW 6-[(3~{R})-3-OXIDANYLPYRROLIDIN-1-YL]-5-PYRIMIDIN-5-YL- HETNAM 2 FYW ~{N}-[4-(TRIFLUOROMETHYLOXY)PHENYL]PYRIDINE-3- HETNAM 3 FYW CARBOXAMIDE HETNAM STI 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4- HETNAM 2 STI PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN STI STI-571; IMATINIB FORMUL 3 GOL C3 H8 O3 FORMUL 4 CL CL 1- FORMUL 5 FYW 2(C21 H18 F3 N5 O3) FORMUL 6 STI 2(C29 H31 N7 O) FORMUL 9 HOH *384(H2 O) HELIX 1 AA1 GLU A 257 THR A 259 5 3 HELIX 2 AA2 GLY A 268 GLN A 271 5 4 HELIX 3 AA3 LYS A 282 SER A 284 5 3 HELIX 4 AA4 GLU A 298 ILE A 312 1 15 HELIX 5 AA5 LEU A 342 CYS A 349 1 8 HELIX 6 AA6 SER A 355 LYS A 376 1 22 HELIX 7 AA7 ALA A 384 ARG A 386 5 3 HELIX 8 AA8 GLU A 392 HIS A 394 5 3 HELIX 9 AA9 PRO A 421 THR A 425 5 5 HELIX 10 AB1 ALA A 426 ASN A 433 1 8 HELIX 11 AB2 SER A 436 THR A 453 1 18 HELIX 12 AB3 ASP A 463 SER A 465 5 3 HELIX 13 AB4 GLN A 466 LYS A 473 1 8 HELIX 14 AB5 PRO A 484 TRP A 495 1 12 HELIX 15 AB6 ASN A 498 ARG A 502 5 5 HELIX 16 AB7 SER A 504 PHE A 516 1 13 HELIX 17 AB8 SER A 520 LEU A 529 1 10 HELIX 18 AB9 GLU B 257 THR B 259 5 3 HELIX 19 AC1 GLY B 268 GLN B 271 5 4 HELIX 20 AC2 GLU B 298 GLU B 311 1 14 HELIX 21 AC3 LEU B 342 CYS B 349 1 8 HELIX 22 AC4 SER B 355 LYS B 376 1 22 HELIX 23 AC5 ALA B 384 ARG B 386 5 3 HELIX 24 AC6 GLU B 392 HIS B 394 5 3 HELIX 25 AC7 PRO B 421 THR B 425 5 5 HELIX 26 AC8 ALA B 426 ASN B 433 1 8 HELIX 27 AC9 SER B 436 THR B 453 1 18 HELIX 28 AD1 ASP B 463 SER B 465 5 3 HELIX 29 AD2 GLN B 466 LYS B 473 1 8 HELIX 30 AD3 PRO B 484 TRP B 495 1 12 HELIX 31 AD4 ASN B 498 ARG B 502 5 5 HELIX 32 AD5 SER B 504 THR B 514 1 11 HELIX 33 AD6 SER B 520 LEU B 529 1 10 SHEET 1 AA1 5 ILE A 261 LYS A 266 0 SHEET 2 AA1 5 VAL A 275 TRP A 280 -1 O VAL A 279 N THR A 262 SHEET 3 AA1 5 LEU A 285 LYS A 290 -1 O VAL A 289 N TYR A 276 SHEET 4 AA1 5 TYR A 331 GLU A 335 -1 O ILE A 332 N LYS A 290 SHEET 5 AA1 5 LEU A 320 CYS A 324 -1 N GLY A 322 O ILE A 333 SHEET 1 AA2 3 GLY A 340 ASN A 341 0 SHEET 2 AA2 3 CYS A 388 VAL A 390 -1 O VAL A 390 N GLY A 340 SHEET 3 AA2 3 VAL A 396 VAL A 398 -1 O LYS A 397 N LEU A 389 SHEET 1 AA3 2 THR A 413 HIS A 415 0 SHEET 2 AA3 2 ALA A 418 PHE A 420 -1 O PHE A 420 N THR A 413 SHEET 1 AA4 5 ILE B 261 LYS B 266 0 SHEET 2 AA4 5 VAL B 275 TRP B 280 -1 O GLU B 277 N HIS B 265 SHEET 3 AA4 5 LEU B 285 THR B 291 -1 O VAL B 289 N TYR B 276 SHEET 4 AA4 5 TYR B 331 GLU B 335 -1 O ILE B 332 N LYS B 290 SHEET 5 AA4 5 LEU B 320 CYS B 324 -1 N LEU B 321 O ILE B 333 SHEET 1 AA5 3 GLY B 340 ASN B 341 0 SHEET 2 AA5 3 CYS B 388 VAL B 390 -1 O VAL B 390 N GLY B 340 SHEET 3 AA5 3 VAL B 396 VAL B 398 -1 O LYS B 397 N LEU B 389 SHEET 1 AA6 2 THR B 413 HIS B 415 0 SHEET 2 AA6 2 ALA B 418 PHE B 420 -1 O PHE B 420 N THR B 413 CISPEP 1 PRO A 328 PRO A 329 0 3.31 CISPEP 2 PRO B 328 PRO B 329 0 -2.90 SITE 1 AC1 11 TYR A 339 TYR A 345 GLU A 353 TYR A 432 SITE 2 AC1 11 ASN A 498 PRO A 499 HOH A 707 HOH A 737 SITE 3 AC1 11 HOH A 779 HOH A 818 HOH A 867 SITE 1 AC2 3 ILE A 379 HOH A 900 HOH A 938 SITE 1 AC3 20 ARG A 351 ALA A 356 LEU A 359 LEU A 360 SITE 2 AC3 20 ALA A 363 LEU A 448 ILE A 451 ALA A 452 SITE 3 AC3 20 THR A 453 GLU A 481 PRO A 484 VAL A 487 SITE 4 AC3 20 PHE A 512 ILE A 521 VAL A 525 LEU A 529 SITE 5 AC3 20 HOH A 706 HOH A 746 HOH A 795 HOH A 849 SITE 1 AC4 18 VAL A 275 ALA A 288 LYS A 290 GLU A 305 SITE 2 AC4 18 MET A 309 ILE A 312 VAL A 318 ILE A 332 SITE 3 AC4 18 THR A 334 PHE A 336 MET A 337 ILE A 379 SITE 4 AC4 18 HIS A 380 LEU A 389 ALA A 399 ASP A 400 SITE 5 AC4 18 PHE A 401 HOH A 854 SITE 1 AC5 18 ARG B 351 ALA B 356 LEU B 359 LEU B 360 SITE 2 AC5 18 LEU B 448 ILE B 451 ALA B 452 THR B 453 SITE 3 AC5 18 TYR B 454 MET B 456 GLU B 481 VAL B 487 SITE 4 AC5 18 PHE B 512 ILE B 521 VAL B 525 LEU B 529 SITE 5 AC5 18 HOH B 721 HOH B 759 SITE 1 AC6 17 VAL B 275 ALA B 288 LYS B 290 GLU B 305 SITE 2 AC6 17 MET B 309 ILE B 312 VAL B 318 ILE B 332 SITE 3 AC6 17 THR B 334 PHE B 336 MET B 337 ILE B 379 SITE 4 AC6 17 HIS B 380 ALA B 399 ASP B 400 PHE B 401 SITE 5 AC6 17 HOH B 783 CRYST1 42.160 65.025 66.086 73.00 80.52 84.88 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023719 -0.002125 -0.003503 0.00000 SCALE2 0.000000 0.015440 -0.004550 0.00000 SCALE3 0.000000 0.000000 0.015993 0.00000