HEADER HYDROLASE 17-AUG-18 6HDE TITLE STRUCTURE OF ESCHERICHIA COLI DUTPASE Q93H MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: DUTPASE,DUTP PYROPHOSPHATASE; COMPND 5 EC: 3.6.1.23; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: DUT, DNAS, SOF, B3640, JW3615; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA KEYWDS DUTPASE, HOMOTRIMER, MUTANT, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.BENEDEK,B.G.VERTESSY,I.LEVELES REVDAT 2 17-JAN-24 6HDE 1 LINK REVDAT 1 28-AUG-19 6HDE 0 JRNL AUTH A.BENEDEK,F.TEMESVARY-KIS,T.KHATANBAATAR,I.LEVELES, JRNL AUTH 2 E.V.SURANYI,J.E.SZABO,L.WUNDERLICH,B.G.VERTESSY JRNL TITL THE ROLE OF A KEY AMINO ACID POSITION IN SPECIES-SPECIFIC JRNL TITL 2 PROTEINACEOUS DUTPASE INHIBITION. JRNL REF BIOMOLECULES V. 9 2019 JRNL REFN ESSN 2218-273X JRNL PMID 31174420 JRNL DOI 10.3390/BIOM9060221 REMARK 2 REMARK 2 RESOLUTION. 1.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.310 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 36432 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1798 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.8259 - 4.2779 0.99 2848 141 0.1717 0.2039 REMARK 3 2 4.2779 - 3.3959 1.00 2713 158 0.1532 0.1798 REMARK 3 3 3.3959 - 2.9667 1.00 2704 143 0.1702 0.2026 REMARK 3 4 2.9667 - 2.6955 1.00 2694 134 0.1879 0.2452 REMARK 3 5 2.6955 - 2.5023 1.00 2670 143 0.1930 0.2510 REMARK 3 6 2.5023 - 2.3548 0.97 2603 131 0.1964 0.2554 REMARK 3 7 2.3548 - 2.2369 0.98 2600 132 0.1953 0.2572 REMARK 3 8 2.2369 - 2.1395 0.99 2641 134 0.1917 0.2520 REMARK 3 9 2.1395 - 2.0571 1.00 2665 146 0.1899 0.2383 REMARK 3 10 2.0571 - 1.9861 1.00 2638 127 0.1983 0.2428 REMARK 3 11 1.9861 - 1.9240 1.00 2654 125 0.2088 0.2478 REMARK 3 12 1.9240 - 1.8690 1.00 2605 152 0.2257 0.2475 REMARK 3 13 1.8690 - 1.8198 0.98 2599 132 0.2519 0.2795 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3413 REMARK 3 ANGLE : 1.010 4658 REMARK 3 CHIRALITY : 0.062 531 REMARK 3 PLANARITY : 0.005 597 REMARK 3 DIHEDRAL : 5.283 2487 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 11.8597 2.7165 7.1604 REMARK 3 T TENSOR REMARK 3 T11: 0.1491 T22: 0.1449 REMARK 3 T33: 0.1303 T12: 0.0048 REMARK 3 T13: -0.0016 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 1.0783 L22: 1.2643 REMARK 3 L33: 0.8191 L12: -0.1491 REMARK 3 L13: 0.0715 L23: -0.2521 REMARK 3 S TENSOR REMARK 3 S11: 0.0299 S12: -0.0337 S13: 0.0911 REMARK 3 S21: 0.0151 S22: -0.0230 S23: -0.0103 REMARK 3 S31: 0.0475 S32: 0.0257 S33: -0.0126 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6HDE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1200011526. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96770 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36491 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 45.811 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.0200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1RN8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 7.5, 400 MM NAACETATE, REMARK 280 28% PEG 3350, 1.25 MM DUPNPP, PH 7.4, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.60000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.65000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.25000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.65000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.60000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.25000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -112.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 137 REMARK 465 ALA A 138 REMARK 465 THR A 139 REMARK 465 ASP A 140 REMARK 465 ALA C 138 REMARK 465 THR C 139 REMARK 465 ASP C 140 REMARK 465 ARG C 141 REMARK 465 GLY C 142 REMARK 465 GLU C 143 REMARK 465 GLY C 144 REMARK 465 GLY C 145 REMARK 465 PHE C 146 REMARK 465 GLY C 147 REMARK 465 HIS C 148 REMARK 465 SER C 149 REMARK 465 GLY C 150 REMARK 465 ARG C 151 REMARK 465 GLN C 152 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 4 CG CD CE NZ REMARK 470 LYS A 16 CG CD CE NZ REMARK 470 GLN A 106 CG CD OE1 NE2 REMARK 470 GLU A 129 CG CD OE1 OE2 REMARK 470 GLU A 134 CG CD OE1 OE2 REMARK 470 GLN A 152 CG CD OE1 NE2 REMARK 470 LYS B 16 CG CD CE NZ REMARK 470 GLU B 17 CG CD OE1 OE2 REMARK 470 GLN B 106 CD OE1 NE2 REMARK 470 GLU B 129 CG CD OE1 OE2 REMARK 470 GLU B 134 CG CD OE1 OE2 REMARK 470 ASP B 137 CG OD1 OD2 REMARK 470 MET C 1 CG SD CE REMARK 470 LYS C 4 CG CD CE NZ REMARK 470 GLU C 134 CG CD OE1 OE2 REMARK 470 ASP C 135 CG OD1 OD2 REMARK 470 ASP C 137 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2A DUP A 202 O HOH A 301 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 60 -16.65 77.19 REMARK 500 LEU A 85 -58.22 74.33 REMARK 500 PHE A 146 55.34 37.26 REMARK 500 ALA B 60 -31.04 71.13 REMARK 500 LEU B 85 -57.08 69.45 REMARK 500 LYS C 16 -97.59 -124.26 REMARK 500 ALA C 60 -25.82 73.21 REMARK 500 LEU C 85 -55.87 70.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DUP A 201 O2A REMARK 620 2 DUP A 201 O2B 88.4 REMARK 620 3 DUP A 201 O1G 95.2 84.1 REMARK 620 4 HOH A 308 O 88.9 93.9 175.3 REMARK 620 5 HOH A 311 O 171.9 97.9 90.6 85.6 REMARK 620 6 HOH A 339 O 84.1 172.1 93.9 88.7 89.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DUP A 202 O2A REMARK 620 2 DUP A 202 O2B 87.5 REMARK 620 3 DUP A 202 O1G 91.8 87.3 REMARK 620 4 HOH A 334 O 85.9 173.3 92.2 REMARK 620 5 HOH B 302 O 91.9 93.2 176.3 87.7 REMARK 620 6 HOH B 314 O 171.0 101.1 91.2 85.5 85.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DUP B 201 O2A REMARK 620 2 DUP B 201 O2B 87.9 REMARK 620 3 DUP B 201 O1G 93.3 90.9 REMARK 620 4 HOH B 341 O 89.6 177.5 89.2 REMARK 620 5 HOH C 305 O 177.1 94.4 88.4 88.0 REMARK 620 6 HOH C 318 O 92.9 91.8 173.3 88.4 85.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DUP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DUP A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DUP B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 201 DBREF 6HDE A 2 152 UNP P06968 DUT_ECOLI 1 151 DBREF 6HDE B 2 152 UNP P06968 DUT_ECOLI 1 151 DBREF 6HDE C 2 152 UNP P06968 DUT_ECOLI 1 151 SEQADV 6HDE MET A 1 UNP P06968 INITIATING METHIONINE SEQADV 6HDE HIS A 94 UNP P06968 GLN 93 ENGINEERED MUTATION SEQADV 6HDE MET B 1 UNP P06968 INITIATING METHIONINE SEQADV 6HDE HIS B 94 UNP P06968 GLN 93 ENGINEERED MUTATION SEQADV 6HDE MET C 1 UNP P06968 INITIATING METHIONINE SEQADV 6HDE HIS C 94 UNP P06968 GLN 93 ENGINEERED MUTATION SEQRES 1 A 152 MET MET LYS LYS ILE ASP VAL LYS ILE LEU ASP PRO ARG SEQRES 2 A 152 VAL GLY LYS GLU PHE PRO LEU PRO THR TYR ALA THR SER SEQRES 3 A 152 GLY SER ALA GLY LEU ASP LEU ARG ALA CYS LEU ASN ASP SEQRES 4 A 152 ALA VAL GLU LEU ALA PRO GLY ASP THR THR LEU VAL PRO SEQRES 5 A 152 THR GLY LEU ALA ILE HIS ILE ALA ASP PRO SER LEU ALA SEQRES 6 A 152 ALA MET MET LEU PRO ARG SER GLY LEU GLY HIS LYS HIS SEQRES 7 A 152 GLY ILE VAL LEU GLY ASN LEU VAL GLY LEU ILE ASP SER SEQRES 8 A 152 ASP TYR HIS GLY GLN LEU MET ILE SER VAL TRP ASN ARG SEQRES 9 A 152 GLY GLN ASP SER PHE THR ILE GLN PRO GLY GLU ARG ILE SEQRES 10 A 152 ALA GLN MET ILE PHE VAL PRO VAL VAL GLN ALA GLU PHE SEQRES 11 A 152 ASN LEU VAL GLU ASP PHE ASP ALA THR ASP ARG GLY GLU SEQRES 12 A 152 GLY GLY PHE GLY HIS SER GLY ARG GLN SEQRES 1 B 152 MET MET LYS LYS ILE ASP VAL LYS ILE LEU ASP PRO ARG SEQRES 2 B 152 VAL GLY LYS GLU PHE PRO LEU PRO THR TYR ALA THR SER SEQRES 3 B 152 GLY SER ALA GLY LEU ASP LEU ARG ALA CYS LEU ASN ASP SEQRES 4 B 152 ALA VAL GLU LEU ALA PRO GLY ASP THR THR LEU VAL PRO SEQRES 5 B 152 THR GLY LEU ALA ILE HIS ILE ALA ASP PRO SER LEU ALA SEQRES 6 B 152 ALA MET MET LEU PRO ARG SER GLY LEU GLY HIS LYS HIS SEQRES 7 B 152 GLY ILE VAL LEU GLY ASN LEU VAL GLY LEU ILE ASP SER SEQRES 8 B 152 ASP TYR HIS GLY GLN LEU MET ILE SER VAL TRP ASN ARG SEQRES 9 B 152 GLY GLN ASP SER PHE THR ILE GLN PRO GLY GLU ARG ILE SEQRES 10 B 152 ALA GLN MET ILE PHE VAL PRO VAL VAL GLN ALA GLU PHE SEQRES 11 B 152 ASN LEU VAL GLU ASP PHE ASP ALA THR ASP ARG GLY GLU SEQRES 12 B 152 GLY GLY PHE GLY HIS SER GLY ARG GLN SEQRES 1 C 152 MET MET LYS LYS ILE ASP VAL LYS ILE LEU ASP PRO ARG SEQRES 2 C 152 VAL GLY LYS GLU PHE PRO LEU PRO THR TYR ALA THR SER SEQRES 3 C 152 GLY SER ALA GLY LEU ASP LEU ARG ALA CYS LEU ASN ASP SEQRES 4 C 152 ALA VAL GLU LEU ALA PRO GLY ASP THR THR LEU VAL PRO SEQRES 5 C 152 THR GLY LEU ALA ILE HIS ILE ALA ASP PRO SER LEU ALA SEQRES 6 C 152 ALA MET MET LEU PRO ARG SER GLY LEU GLY HIS LYS HIS SEQRES 7 C 152 GLY ILE VAL LEU GLY ASN LEU VAL GLY LEU ILE ASP SER SEQRES 8 C 152 ASP TYR HIS GLY GLN LEU MET ILE SER VAL TRP ASN ARG SEQRES 9 C 152 GLY GLN ASP SER PHE THR ILE GLN PRO GLY GLU ARG ILE SEQRES 10 C 152 ALA GLN MET ILE PHE VAL PRO VAL VAL GLN ALA GLU PHE SEQRES 11 C 152 ASN LEU VAL GLU ASP PHE ASP ALA THR ASP ARG GLY GLU SEQRES 12 C 152 GLY GLY PHE GLY HIS SER GLY ARG GLN HET DUP A 201 28 HET DUP A 202 28 HET MG A 203 1 HET DUP B 201 28 HET MG B 202 1 HET MG C 201 1 HETNAM DUP 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 4 DUP 3(C9 H16 N3 O13 P3) FORMUL 6 MG 3(MG 2+) FORMUL 10 HOH *162(H2 O) HELIX 1 AA1 ARG A 71 GLY A 79 1 9 HELIX 2 AA2 ARG B 71 GLY B 79 1 9 HELIX 3 AA3 ARG C 71 GLY C 79 1 9 SHEET 1 AA1 5 ILE A 80 LEU A 82 0 SHEET 2 AA1 5 GLN A 96 ASN A 103 -1 O TRP A 102 N VAL A 81 SHEET 3 AA1 5 THR A 48 HIS A 58 -1 N VAL A 51 O ILE A 99 SHEET 4 AA1 5 MET A 2 ILE A 9 -1 N LYS A 8 O ALA A 56 SHEET 5 AA1 5 GLN B 127 LEU B 132 1 O GLU B 129 N LYS A 3 SHEET 1 AA2 4 LEU A 31 ARG A 34 0 SHEET 2 AA2 4 ARG A 116 PRO A 124 -1 O ALA A 118 N LEU A 33 SHEET 3 AA2 4 LEU A 64 LEU A 69 -1 N LEU A 69 O GLN A 119 SHEET 4 AA2 4 GLY A 87 ILE A 89 -1 O GLY A 87 N MET A 68 SHEET 1 AA3 2 VAL A 41 LEU A 43 0 SHEET 2 AA3 2 PHE A 109 ILE A 111 -1 O PHE A 109 N LEU A 43 SHEET 1 AA4 5 GLN A 127 LEU A 132 0 SHEET 2 AA4 5 MET C 2 ILE C 9 1 O LYS C 3 N GLU A 129 SHEET 3 AA4 5 THR C 48 HIS C 58 -1 O ALA C 56 N LYS C 8 SHEET 4 AA4 5 GLN C 96 ASN C 103 -1 O ILE C 99 N VAL C 51 SHEET 5 AA4 5 ILE C 80 LEU C 82 -1 N VAL C 81 O TRP C 102 SHEET 1 AA5 5 ILE B 80 LEU B 82 0 SHEET 2 AA5 5 GLN B 96 ASN B 103 -1 O TRP B 102 N VAL B 81 SHEET 3 AA5 5 THR B 48 HIS B 58 -1 N VAL B 51 O ILE B 99 SHEET 4 AA5 5 MET B 2 ILE B 9 -1 N LYS B 8 O ALA B 56 SHEET 5 AA5 5 GLN C 127 VAL C 133 1 O ASN C 131 N ILE B 5 SHEET 1 AA6 4 LEU B 31 ARG B 34 0 SHEET 2 AA6 4 ARG B 116 PRO B 124 -1 O ALA B 118 N LEU B 33 SHEET 3 AA6 4 LEU B 64 LEU B 69 -1 N LEU B 69 O GLN B 119 SHEET 4 AA6 4 GLY B 87 ILE B 89 -1 O GLY B 87 N MET B 68 SHEET 1 AA7 2 VAL B 41 LEU B 43 0 SHEET 2 AA7 2 PHE B 109 ILE B 111 -1 O PHE B 109 N LEU B 43 SHEET 1 AA8 4 LEU C 31 ARG C 34 0 SHEET 2 AA8 4 ARG C 116 PRO C 124 -1 O ALA C 118 N LEU C 33 SHEET 3 AA8 4 LEU C 64 LEU C 69 -1 N LEU C 69 O GLN C 119 SHEET 4 AA8 4 GLY C 87 ILE C 89 -1 O GLY C 87 N MET C 68 SHEET 1 AA9 2 VAL C 41 LEU C 43 0 SHEET 2 AA9 2 PHE C 109 ILE C 111 -1 O PHE C 109 N LEU C 43 LINK O2A DUP A 201 MG MG A 203 1555 1555 2.15 LINK O2B DUP A 201 MG MG A 203 1555 1555 2.11 LINK O1G DUP A 201 MG MG A 203 1555 1555 2.05 LINK O2A DUP A 202 MG MG B 202 1555 1555 2.03 LINK O2B DUP A 202 MG MG B 202 1555 1555 1.95 LINK O1G DUP A 202 MG MG B 202 1555 1555 1.99 LINK MG MG A 203 O HOH A 308 1555 1555 2.00 LINK MG MG A 203 O HOH A 311 1555 1555 2.03 LINK MG MG A 203 O HOH A 339 1555 1555 2.10 LINK O HOH A 334 MG MG B 202 1555 1555 2.10 LINK O2A DUP B 201 MG MG C 201 1555 1555 2.02 LINK O2B DUP B 201 MG MG C 201 1555 1555 1.93 LINK O1G DUP B 201 MG MG C 201 1555 1555 2.10 LINK MG MG B 202 O HOH B 302 1555 1555 2.20 LINK MG MG B 202 O HOH B 314 1555 1555 2.10 LINK O HOH B 341 MG MG C 201 1555 1555 2.15 LINK MG MG C 201 O HOH C 305 1555 1555 2.20 LINK MG MG C 201 O HOH C 318 1555 1555 2.12 SITE 1 AC1 21 ARG A 71 SER A 72 GLY A 73 GLN A 119 SITE 2 AC1 21 MG A 203 HOH A 303 HOH A 306 HOH A 308 SITE 3 AC1 21 HOH A 309 HOH A 311 HOH A 325 HOH A 333 SITE 4 AC1 21 HOH A 339 HOH A 343 ASN B 84 GLY B 87 SITE 5 AC1 21 LEU B 88 ILE B 89 ASP B 90 TYR B 93 SITE 6 AC1 21 MET B 98 SITE 1 AC2 25 ARG A 141 GLY A 145 PHE A 146 GLY A 147 SITE 2 AC2 25 HIS A 148 SER A 149 HOH A 301 HOH A 310 SITE 3 AC2 25 HOH A 332 HOH A 334 HOH A 341 ARG B 71 SITE 4 AC2 25 SER B 72 GLY B 73 GLN B 119 MG B 202 SITE 5 AC2 25 HOH B 302 HOH B 314 ASN C 84 GLY C 87 SITE 6 AC2 25 LEU C 88 ASP C 90 TYR C 93 MET C 98 SITE 7 AC2 25 HOH C 303 SITE 1 AC3 4 DUP A 201 HOH A 308 HOH A 311 HOH A 339 SITE 1 AC4 25 ASN A 84 GLY A 87 LEU A 88 ILE A 89 SITE 2 AC4 25 ASP A 90 TYR A 93 MET A 98 HOH A 302 SITE 3 AC4 25 ARG B 141 GLY B 145 PHE B 146 GLY B 147 SITE 4 AC4 25 HIS B 148 SER B 149 HOH B 303 HOH B 311 SITE 5 AC4 25 HOH B 315 HOH B 341 ARG C 71 SER C 72 SITE 6 AC4 25 GLY C 73 GLN C 119 MG C 201 HOH C 305 SITE 7 AC4 25 HOH C 318 SITE 1 AC5 4 DUP A 202 HOH A 334 HOH B 302 HOH B 314 SITE 1 AC6 4 DUP B 201 HOH B 341 HOH C 305 HOH C 318 CRYST1 63.200 66.500 95.300 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015823 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015038 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010493 0.00000