HEADER BIOTIN BINDING PROTEIN 19-AUG-18 6HDT TITLE CRYSTAL STRUCTURE OF SHORT AFIFAVIDIN - BIOTIN COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: SHORT AFIFAVIDIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AFIFELLA PFENNIGII; SOURCE 3 ORGANISM_TAXID: 209897; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AVIDIN, BIOTIN, HIGH AFFINITY SYSTEMS, DIMERIC AVIDINS, BIOTIN KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR O.LIVNAH,O.AVRAHAM REVDAT 3 17-JAN-24 6HDT 1 REMARK REVDAT 2 26-DEC-18 6HDT 1 JRNL REVDAT 1 14-NOV-18 6HDT 0 JRNL AUTH O.AVRAHAM,E.A.BAYER,O.LIVNAH JRNL TITL CRYSTAL STRUCTURE OF AFIFAVIDIN REVEALS COMMON FEATURES OF JRNL TITL 2 MOLECULAR ASSEMBLAGE IN THE BACTERIAL DIMERIC AVIDINS. JRNL REF FEBS J. V. 285 4617 2018 JRNL REFN ISSN 1742-4658 JRNL PMID 30369031 JRNL DOI 10.1111/FEBS.14685 REMARK 2 REMARK 2 RESOLUTION. 1.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0071 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 49575 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2608 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.54 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.58 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3360 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.74 REMARK 3 BIN R VALUE (WORKING SET) : 0.3180 REMARK 3 BIN FREE R VALUE SET COUNT : 177 REMARK 3 BIN FREE R VALUE : 0.3630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3600 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 122 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.48000 REMARK 3 B22 (A**2) : -1.76000 REMARK 3 B33 (A**2) : -1.90000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.83000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.128 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.096 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.103 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.208 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3798 ; 0.012 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3243 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5219 ; 1.645 ; 1.909 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7454 ; 0.841 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 498 ; 6.688 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 164 ;35.385 ;25.732 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 455 ;14.134 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ;17.609 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 573 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4579 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 960 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1974 ; 3.322 ; 2.290 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1973 ; 3.315 ; 2.289 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2463 ; 4.185 ; 3.445 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2464 ; 4.186 ; 3.446 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1824 ; 3.891 ; 2.462 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1822 ; 3.893 ; 2.462 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2751 ; 4.574 ; 3.592 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4203 ; 4.802 ;18.902 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4173 ; 4.766 ;18.826 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 7041 ; 5.025 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 32 ;26.747 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 7019 ;16.701 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6HDT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1200011536. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52210 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.530 REMARK 200 RESOLUTION RANGE LOW (A) : 46.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08100 REMARK 200 FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6HDS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.3-1.5M AMMONIUM SULFATE, 0.1M REMARK 280 ACETATE PH 5.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.60900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 ALA A 0 REMARK 465 LYS A 128 REMARK 465 ALA A 129 REMARK 465 MET A 130 REMARK 465 LYS A 131 REMARK 465 MET B -1 REMARK 465 ALA B 0 REMARK 465 GLN B 1 REMARK 465 ASP B 2 REMARK 465 ASN B 127 REMARK 465 LYS B 128 REMARK 465 ALA B 129 REMARK 465 MET B 130 REMARK 465 LYS B 131 REMARK 465 MET C -1 REMARK 465 ALA C 0 REMARK 465 GLN C 1 REMARK 465 ASP C 2 REMARK 465 LYS C 128 REMARK 465 ALA C 129 REMARK 465 MET C 130 REMARK 465 LYS C 131 REMARK 465 MET D -1 REMARK 465 ALA D 0 REMARK 465 GLN D 1 REMARK 465 ASP D 2 REMARK 465 MET D 3 REMARK 465 SER D 4 REMARK 465 PRO D 5 REMARK 465 ARG D 6 REMARK 465 GLN D 7 REMARK 465 SER D 8 REMARK 465 ALA D 9 REMARK 465 GLU D 10 REMARK 465 ASN D 127 REMARK 465 LYS D 128 REMARK 465 ALA D 129 REMARK 465 MET D 130 REMARK 465 LYS D 131 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 305 O HOH A 330 1.84 REMARK 500 O HOH A 307 O HOH A 330 2.04 REMARK 500 O HOH D 325 O HOH D 327 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 303 O HOH D 324 2445 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 112 -32.44 -142.31 REMARK 500 PRO C 15 35.76 -83.02 REMARK 500 SER C 112 13.63 -150.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BTN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BTN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BTN C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BTN D 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6HDS RELATED DB: PDB DBREF 6HDT A -1 131 PDB 6HDT 6HDT -1 131 DBREF 6HDT B -1 131 PDB 6HDT 6HDT -1 131 DBREF 6HDT C -1 131 PDB 6HDT 6HDT -1 131 DBREF 6HDT D -1 131 PDB 6HDT 6HDT -1 131 SEQRES 1 A 133 MET ALA GLN ASP MET SER PRO ARG GLN SER ALA GLU ALA SEQRES 2 A 133 PHE GLY VAL PRO ALA VAL SER SER SER TRP VAL ASN GLN SEQRES 3 A 133 ASP GLY SER THR MET THR LEU VAL PHE GLY ALA GLY ASN SEQRES 4 A 133 SER VAL SER GLY PHE TYR VAL ASN ASN ALA PRO GLY PHE SEQRES 5 A 133 GLY CYS GLN GLY THR PRO TYR PRO LEU VAL GLY LEU THR SEQRES 6 A 133 TRP GLY ASN PHE ILE GLY PHE THR VAL ALA TRP ASP ASN SEQRES 7 A 133 ALA THR ALA ASN CYS ASN SER VAL THR SER TRP THR GLY SEQRES 8 A 133 PHE ALA GLU ALA ALA GLY SER ASP VAL THR ILE VAL THR SEQRES 9 A 133 ASP TRP ASN LEU ALA TYR GLN GLY SER SER SER GLY GLU SEQRES 10 A 133 ILE GLN GLN GLY SER ASP THR PHE THR LEU VAL ASN LYS SEQRES 11 A 133 ALA MET LYS SEQRES 1 B 133 MET ALA GLN ASP MET SER PRO ARG GLN SER ALA GLU ALA SEQRES 2 B 133 PHE GLY VAL PRO ALA VAL SER SER SER TRP VAL ASN GLN SEQRES 3 B 133 ASP GLY SER THR MET THR LEU VAL PHE GLY ALA GLY ASN SEQRES 4 B 133 SER VAL SER GLY PHE TYR VAL ASN ASN ALA PRO GLY PHE SEQRES 5 B 133 GLY CYS GLN GLY THR PRO TYR PRO LEU VAL GLY LEU THR SEQRES 6 B 133 TRP GLY ASN PHE ILE GLY PHE THR VAL ALA TRP ASP ASN SEQRES 7 B 133 ALA THR ALA ASN CYS ASN SER VAL THR SER TRP THR GLY SEQRES 8 B 133 PHE ALA GLU ALA ALA GLY SER ASP VAL THR ILE VAL THR SEQRES 9 B 133 ASP TRP ASN LEU ALA TYR GLN GLY SER SER SER GLY GLU SEQRES 10 B 133 ILE GLN GLN GLY SER ASP THR PHE THR LEU VAL ASN LYS SEQRES 11 B 133 ALA MET LYS SEQRES 1 C 133 MET ALA GLN ASP MET SER PRO ARG GLN SER ALA GLU ALA SEQRES 2 C 133 PHE GLY VAL PRO ALA VAL SER SER SER TRP VAL ASN GLN SEQRES 3 C 133 ASP GLY SER THR MET THR LEU VAL PHE GLY ALA GLY ASN SEQRES 4 C 133 SER VAL SER GLY PHE TYR VAL ASN ASN ALA PRO GLY PHE SEQRES 5 C 133 GLY CYS GLN GLY THR PRO TYR PRO LEU VAL GLY LEU THR SEQRES 6 C 133 TRP GLY ASN PHE ILE GLY PHE THR VAL ALA TRP ASP ASN SEQRES 7 C 133 ALA THR ALA ASN CYS ASN SER VAL THR SER TRP THR GLY SEQRES 8 C 133 PHE ALA GLU ALA ALA GLY SER ASP VAL THR ILE VAL THR SEQRES 9 C 133 ASP TRP ASN LEU ALA TYR GLN GLY SER SER SER GLY GLU SEQRES 10 C 133 ILE GLN GLN GLY SER ASP THR PHE THR LEU VAL ASN LYS SEQRES 11 C 133 ALA MET LYS SEQRES 1 D 133 MET ALA GLN ASP MET SER PRO ARG GLN SER ALA GLU ALA SEQRES 2 D 133 PHE GLY VAL PRO ALA VAL SER SER SER TRP VAL ASN GLN SEQRES 3 D 133 ASP GLY SER THR MET THR LEU VAL PHE GLY ALA GLY ASN SEQRES 4 D 133 SER VAL SER GLY PHE TYR VAL ASN ASN ALA PRO GLY PHE SEQRES 5 D 133 GLY CYS GLN GLY THR PRO TYR PRO LEU VAL GLY LEU THR SEQRES 6 D 133 TRP GLY ASN PHE ILE GLY PHE THR VAL ALA TRP ASP ASN SEQRES 7 D 133 ALA THR ALA ASN CYS ASN SER VAL THR SER TRP THR GLY SEQRES 8 D 133 PHE ALA GLU ALA ALA GLY SER ASP VAL THR ILE VAL THR SEQRES 9 D 133 ASP TRP ASN LEU ALA TYR GLN GLY SER SER SER GLY GLU SEQRES 10 D 133 ILE GLN GLN GLY SER ASP THR PHE THR LEU VAL ASN LYS SEQRES 11 D 133 ALA MET LYS HET BTN A 201 16 HET BTN B 201 16 HET BTN C 201 16 HET BTN D 201 16 HETNAM BTN BIOTIN FORMUL 5 BTN 4(C10 H16 N2 O3 S) FORMUL 9 HOH *122(H2 O) HELIX 1 AA1 SER A 4 GLY A 13 1 10 HELIX 2 AA2 SER B 4 GLY B 13 1 10 HELIX 3 AA3 SER C 4 GLY C 13 1 10 SHEET 1 AA1 9 SER A 18 VAL A 22 0 SHEET 2 AA1 9 THR A 28 PHE A 33 -1 O MET A 29 N TRP A 21 SHEET 3 AA1 9 SER A 38 VAL A 44 -1 O VAL A 44 N THR A 28 SHEET 4 AA1 9 PRO A 56 TRP A 64 -1 O GLY A 61 N VAL A 39 SHEET 5 AA1 9 PHE A 67 ASP A 75 -1 O THR A 71 N VAL A 60 SHEET 6 AA1 9 ASN A 80 ALA A 94 -1 O TRP A 87 N PHE A 70 SHEET 7 AA1 9 ASP A 97 TYR A 108 -1 O ASP A 97 N ALA A 94 SHEET 8 AA1 9 GLU A 115 LEU A 125 -1 O GLY A 119 N TRP A 104 SHEET 9 AA1 9 SER A 18 VAL A 22 -1 N VAL A 22 O THR A 124 SHEET 1 AA2 9 SER B 18 ASN B 23 0 SHEET 2 AA2 9 THR B 28 PHE B 33 -1 O MET B 29 N TRP B 21 SHEET 3 AA2 9 SER B 38 VAL B 44 -1 O VAL B 44 N THR B 28 SHEET 4 AA2 9 TYR B 57 TRP B 64 -1 O GLY B 61 N VAL B 39 SHEET 5 AA2 9 PHE B 67 ASP B 75 -1 O THR B 71 N VAL B 60 SHEET 6 AA2 9 ASN B 80 ALA B 94 -1 O TRP B 87 N PHE B 70 SHEET 7 AA2 9 ASP B 97 GLN B 109 -1 O ASP B 97 N ALA B 94 SHEET 8 AA2 9 GLY B 114 LEU B 125 -1 O GLN B 117 N LEU B 106 SHEET 9 AA2 9 SER B 18 ASN B 23 -1 N VAL B 22 O THR B 124 SHEET 1 AA3 9 SER C 18 ASN C 23 0 SHEET 2 AA3 9 THR C 28 PHE C 33 -1 O MET C 29 N TRP C 21 SHEET 3 AA3 9 SER C 38 VAL C 44 -1 O VAL C 44 N THR C 28 SHEET 4 AA3 9 PRO C 56 TRP C 64 -1 O TYR C 57 N TYR C 43 SHEET 5 AA3 9 PHE C 67 ASP C 75 -1 O THR C 71 N VAL C 60 SHEET 6 AA3 9 ASN C 80 ALA C 94 -1 O TRP C 87 N PHE C 70 SHEET 7 AA3 9 ASP C 97 GLN C 109 -1 O THR C 99 N GLU C 92 SHEET 8 AA3 9 GLY C 114 ASN C 127 -1 O GLN C 117 N LEU C 106 SHEET 9 AA3 9 SER C 18 ASN C 23 -1 N SER C 20 O VAL C 126 SHEET 1 AA4 9 SER D 18 ASN D 23 0 SHEET 2 AA4 9 THR D 28 PHE D 33 -1 O MET D 29 N TRP D 21 SHEET 3 AA4 9 SER D 38 VAL D 44 -1 O SER D 40 N VAL D 32 SHEET 4 AA4 9 TYR D 57 TRP D 64 -1 O GLY D 61 N VAL D 39 SHEET 5 AA4 9 PHE D 67 ASP D 75 -1 O THR D 71 N VAL D 60 SHEET 6 AA4 9 ASN D 80 ALA D 94 -1 O TRP D 87 N PHE D 70 SHEET 7 AA4 9 ASP D 97 GLN D 109 -1 O THR D 99 N GLU D 92 SHEET 8 AA4 9 GLY D 114 LEU D 125 -1 O GLN D 117 N LEU D 106 SHEET 9 AA4 9 SER D 18 ASN D 23 -1 N VAL D 22 O THR D 124 SSBOND 1 CYS A 52 CYS A 81 1555 1555 2.12 SSBOND 2 CYS B 52 CYS B 81 1555 1555 2.10 SSBOND 3 CYS C 52 CYS C 81 1555 1555 2.06 SSBOND 4 CYS D 52 CYS D 81 1555 1555 2.08 SITE 1 AC1 14 ASN A 23 SER A 27 TYR A 43 ASN A 45 SITE 2 AC1 14 PHE A 50 GLY A 51 TRP A 74 CYS A 81 SITE 3 AC1 14 SER A 83 THR A 85 TRP A 87 TRP A 104 SITE 4 AC1 14 ASP A 121 HOH A 305 SITE 1 AC2 13 ASN B 23 SER B 27 TYR B 43 ASN B 45 SITE 2 AC2 13 PHE B 50 GLY B 51 TRP B 74 CYS B 81 SITE 3 AC2 13 SER B 83 THR B 85 TRP B 87 TRP B 104 SITE 4 AC2 13 ASP B 121 SITE 1 AC3 13 ASN C 23 SER C 27 TYR C 43 ASN C 45 SITE 2 AC3 13 ALA C 47 PHE C 50 GLY C 51 TRP C 74 SITE 3 AC3 13 CYS C 81 SER C 83 THR C 85 TRP C 104 SITE 4 AC3 13 ASP C 121 SITE 1 AC4 14 ASN D 23 SER D 27 TYR D 43 ASN D 45 SITE 2 AC4 14 ALA D 47 PHE D 50 GLY D 51 TRP D 74 SITE 3 AC4 14 CYS D 81 SER D 83 THR D 85 TRP D 87 SITE 4 AC4 14 TRP D 104 ASP D 121 CRYST1 42.131 65.218 67.738 90.00 100.25 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023735 0.000000 0.004294 0.00000 SCALE2 0.000000 0.015333 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015002 0.00000