HEADER LIGASE 20-AUG-18 6HE0 TITLE CRYSTAL STRUCTURE OF 2-HYDROXYISOBUTYRYL-COA LIGASE (HCL) IN COMPLEX TITLE 2 WITH 2-HIB-AMP AND COA IN THE THIOESTERFICATION STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-HYDROXYISOBUTYRYL-COA SYNTHETASE; COMPND 3 CHAIN: A; COMPND 4 EC: 6.2.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AQUINCOLA TERTIARICARBONIS; SOURCE 3 ORGANISM_TAXID: 391953; SOURCE 4 GENE: HCL; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LIGASE, 2-HYDROXYISOBUTYRATE COA EXPDTA X-RAY DIFFRACTION AUTHOR M.ZAHN,T.ROHWERDER,N.STRATER REVDAT 2 17-JAN-24 6HE0 1 REMARK REVDAT 1 28-AUG-19 6HE0 0 JRNL AUTH M.ZAHN,N.KURTEVA-YANEVA,J.SCHUSTER,U.KRUG,T.GEORGI, JRNL AUTH 2 R.H.MULLER,T.ROHWERDER,N.STRATER JRNL TITL STRUCTURES OF 2-HYDROXYISOBUTYRIC ACID-COA LIGASE REVEAL JRNL TITL 2 DETERMINANTS OF SUBSTRATE SPECIFICITY AND DESCRIBE A JRNL TITL 3 MULTI-CONFORMATIONAL CATALYTIC CYCLE. JRNL REF J.MOL.BIOL. V. 431 2747 2019 JRNL REFN ESSN 1089-8638 JRNL PMID 31145912 JRNL DOI 10.1016/J.JMB.2019.05.027 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23493 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1206 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 12 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.41 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2826 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1854 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2664 REMARK 3 BIN R VALUE (WORKING SET) : 0.1804 REMARK 3 BIN FREE R VALUE : 0.2757 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.73 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 162 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3748 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 164 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.32810 REMARK 3 B22 (A**2) : -3.32810 REMARK 3 B33 (A**2) : 6.65630 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.240 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.296 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.212 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.282 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.212 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.908 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3968 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5401 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1367 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 91 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 610 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3968 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 494 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : 18 ; 1.000 ; HARMONIC REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4723 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.06 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.50 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.52 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|-1 - A|361} REMARK 3 ORIGIN FOR THE GROUP (A): 10.4112 32.7830 15.7895 REMARK 3 T TENSOR REMARK 3 T11: -0.0228 T22: -0.0778 REMARK 3 T33: -0.0783 T12: 0.0256 REMARK 3 T13: 0.0381 T23: 0.0318 REMARK 3 L TENSOR REMARK 3 L11: 0.6598 L22: 1.0128 REMARK 3 L33: 1.2150 L12: -0.1900 REMARK 3 L13: -0.2378 L23: 0.0007 REMARK 3 S TENSOR REMARK 3 S11: -0.0469 S12: -0.0264 S13: -0.1139 REMARK 3 S21: 0.2759 S22: 0.0464 S23: 0.1884 REMARK 3 S31: 0.2022 S32: -0.1688 S33: 0.0005 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|362 - A|475} REMARK 3 ORIGIN FOR THE GROUP (A): 31.4017 53.5964 19.8327 REMARK 3 T TENSOR REMARK 3 T11: -0.0274 T22: -0.0200 REMARK 3 T33: -0.1107 T12: 0.0481 REMARK 3 T13: -0.0669 T23: -0.0667 REMARK 3 L TENSOR REMARK 3 L11: 2.4282 L22: 1.7343 REMARK 3 L33: 2.0059 L12: -0.7648 REMARK 3 L13: -0.6320 L23: 0.2597 REMARK 3 S TENSOR REMARK 3 S11: -0.0606 S12: -0.1345 S13: 0.1898 REMARK 3 S21: 0.2988 S22: 0.1443 S23: -0.3310 REMARK 3 S31: 0.0049 S32: 0.5152 S33: -0.0837 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6HE0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1200011545. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23659 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.310 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 8.200 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.31 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : 0.33100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2Y4O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.0, 24% PEG 3350, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.58067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 67.16133 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 67.16133 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 33.58067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 ALA A -9 REMARK 465 SER A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 PHE A 454 REMARK 465 ALA A 477 REMARK 465 GLY A 478 REMARK 465 SER A 479 REMARK 465 ALA A 480 REMARK 465 TRP A 481 REMARK 465 SER A 482 REMARK 465 HIS A 483 REMARK 465 PRO A 484 REMARK 465 GLN A 485 REMARK 465 PHE A 486 REMARK 465 GLU A 487 REMARK 465 LYS A 488 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 9 78.16 -154.01 REMARK 500 CYS A 104 -55.53 71.81 REMARK 500 HIS A 114 -167.57 -126.89 REMARK 500 ALA A 158 58.02 -109.15 REMARK 500 SER A 162 -135.23 -154.77 REMARK 500 SER A 266 -89.49 -100.52 REMARK 500 SER A 282 60.89 -100.57 REMARK 500 ASN A 302 -2.42 -141.49 REMARK 500 ASP A 360 -168.03 -126.91 REMARK 500 SER A 397 -159.62 -106.34 REMARK 500 ASP A 462 32.13 -98.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8LE A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue COA A 1003 DBREF 6HE0 A 1 477 UNP I3VE75 I3VE75_9BURK 1 477 SEQADV 6HE0 MET A -10 UNP I3VE75 INITIATING METHIONINE SEQADV 6HE0 ALA A -9 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 SER A -8 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 HIS A -7 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 HIS A -6 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 HIS A -5 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 HIS A -4 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 HIS A -3 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 HIS A -2 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 SER A -1 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 GLY A 0 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 GLY A 478 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 SER A 479 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 ALA A 480 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 TRP A 481 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 SER A 482 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 HIS A 483 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 PRO A 484 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 GLN A 485 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 PHE A 486 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 GLU A 487 UNP I3VE75 EXPRESSION TAG SEQADV 6HE0 LYS A 488 UNP I3VE75 EXPRESSION TAG SEQRES 1 A 499 MET ALA SER HIS HIS HIS HIS HIS HIS SER GLY MET GLU SEQRES 2 A 499 GLU TRP ASN PHE PRO VAL GLU TYR ASP GLU ASN TYR LEU SEQRES 3 A 499 PRO PRO ALA ASP SER ARG TYR TRP PHE PRO ARG ARG GLU SEQRES 4 A 499 THR MET PRO ALA ALA GLU ARG ASP LYS ALA ILE LEU GLY SEQRES 5 A 499 ARG LEU GLN GLN VAL CYS GLN TYR ALA TRP GLU HIS ALA SEQRES 6 A 499 PRO PHE TYR ARG ARG LYS TRP GLU GLU ALA GLY PHE GLN SEQRES 7 A 499 PRO SER GLN LEU LYS SER LEU GLU ASP PHE GLU ALA ARG SEQRES 8 A 499 VAL PRO VAL VAL LYS LYS THR ASP LEU ARG GLU SER GLN SEQRES 9 A 499 ALA ALA HIS PRO PRO PHE GLY ASP TYR VAL CYS VAL PRO SEQRES 10 A 499 ASN SER GLU ILE PHE HIS VAL HIS GLY THR SER GLY THR SEQRES 11 A 499 THR GLY ARG PRO THR ALA PHE GLY ILE GLY ARG ALA ASP SEQRES 12 A 499 TRP ARG ALA ILE ALA ASN ALA HIS ALA ARG ILE MET TRP SEQRES 13 A 499 GLY MET GLY ILE ARG PRO GLY ASP LEU VAL CYS VAL ALA SEQRES 14 A 499 ALA VAL PHE SER LEU TYR MET GLY SER TRP GLY ALA LEU SEQRES 15 A 499 ALA GLY ALA GLU ARG LEU ARG ALA LYS ALA PHE PRO PHE SEQRES 16 A 499 GLY ALA GLY ALA PRO GLY MET SER ALA ARG LEU VAL GLN SEQRES 17 A 499 TRP LEU ASP THR MET LYS PRO ALA ALA PHE TYR GLY THR SEQRES 18 A 499 PRO SER TYR ALA ILE HIS LEU ALA GLU VAL ALA ARG GLU SEQRES 19 A 499 GLU LYS LEU ASN PRO ARG ASN PHE GLY LEU LYS CYS LEU SEQRES 20 A 499 PHE PHE SER GLY GLU PRO GLY ALA SER VAL PRO GLY VAL SEQRES 21 A 499 LYS ASP ARG ILE GLU GLU ALA TYR GLY ALA LYS VAL TYR SEQRES 22 A 499 ASP CYS GLY SER MET ALA GLU MET SER PRO PHE MET ASN SEQRES 23 A 499 VAL ALA GLY THR GLU GLN SER ASN ASP GLY MET LEU CYS SEQRES 24 A 499 TRP GLN ASP ILE ILE TYR THR GLU VAL CYS ASP PRO ALA SEQRES 25 A 499 ASN MET ARG ARG VAL PRO TYR GLY GLN ARG GLY THR PRO SEQRES 26 A 499 VAL TYR THR HIS LEU GLU ARG THR SER GLN PRO MET ILE SEQRES 27 A 499 ARG LEU LEU SER GLY ASP LEU THR LEU TRP THR ASN ASP SEQRES 28 A 499 GLU ASN PRO CYS GLY ARG THR TYR PRO ARG LEU PRO GLN SEQRES 29 A 499 GLY ILE PHE GLY ARG ILE ASP ASP MET PHE THR ILE ARG SEQRES 30 A 499 GLY GLU ASN ILE TYR PRO SER GLU ILE ASP ALA ALA LEU SEQRES 31 A 499 ASN GLN MET SER GLY TYR GLY GLY GLU HIS ARG ILE VAL SEQRES 32 A 499 ILE THR ARG GLU SER ALA MET ASP GLU LEU LEU LEU ARG SEQRES 33 A 499 VAL GLU PRO SER GLU SER VAL HIS ALA ALA GLY ALA ALA SEQRES 34 A 499 ALA LEU GLU THR PHE ARG THR GLU ALA SER HIS ARG VAL SEQRES 35 A 499 GLN THR VAL LEU GLY VAL ARG ALA LYS VAL GLU LEU VAL SEQRES 36 A 499 ALA PRO ASN SER ILE ALA ARG THR ASP PHE LYS ALA ARG SEQRES 37 A 499 ARG VAL ILE ASP ASP ARG GLU VAL PHE ARG ALA LEU ASN SEQRES 38 A 499 GLN GLN LEU GLN SER SER ALA GLY SER ALA TRP SER HIS SEQRES 39 A 499 PRO GLN PHE GLU LYS HET 8LE A1001 29 HET AMP A1002 23 HET COA A1003 48 HETNAM 8LE [[(2~{R},3~{S},4~{R},5~{R})-5-(6-AMINOPURIN-9-YL)-3,4- HETNAM 2 8LE BIS(OXIDANYL)OXOLAN-2-YL]METHOXY-OXIDANYL-PHOSPHORYL] HETNAM 3 8LE 2-METHYL-2-OXIDANYL-PROPANOATE HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM COA COENZYME A FORMUL 2 8LE C14 H20 N5 O9 P FORMUL 3 AMP C10 H14 N5 O7 P FORMUL 4 COA C21 H36 N7 O16 P3 S FORMUL 5 HOH *164(H2 O) HELIX 1 AA1 PHE A 24 MET A 30 1 7 HELIX 2 AA2 PRO A 31 ALA A 54 1 24 HELIX 3 AA3 ALA A 54 GLY A 65 1 12 HELIX 4 AA4 GLN A 67 LEU A 71 5 5 HELIX 5 AA5 SER A 73 VAL A 81 1 9 HELIX 6 AA6 LYS A 85 HIS A 96 1 12 HELIX 7 AA7 PRO A 106 SER A 108 5 3 HELIX 8 AA8 ARG A 130 MET A 147 1 18 HELIX 9 AA9 TYR A 164 LEU A 177 1 14 HELIX 10 AB1 GLY A 190 LYS A 203 1 14 HELIX 11 AB2 THR A 210 GLU A 224 1 15 HELIX 12 AB3 ASN A 227 PHE A 231 5 5 HELIX 13 AB4 VAL A 246 GLY A 258 1 13 HELIX 14 AB5 MET A 267 SER A 271 5 5 HELIX 15 AB6 PRO A 272 MET A 274 5 3 HELIX 16 AB7 TYR A 371 GLN A 381 1 11 HELIX 17 AB8 SER A 409 ALA A 415 1 7 HELIX 18 AB9 GLY A 416 GLY A 436 1 21 HELIX 19 AC1 ARG A 463 SER A 476 1 14 SHEET 1 AA1 2 ILE A 110 GLY A 115 0 SHEET 2 AA1 2 ALA A 125 GLY A 129 -1 O ILE A 128 N PHE A 111 SHEET 1 AA2 5 LYS A 180 PHE A 182 0 SHEET 2 AA2 5 LEU A 154 VAL A 157 1 N VAL A 155 O PHE A 182 SHEET 3 AA2 5 ALA A 206 GLY A 209 1 O ALA A 206 N CYS A 156 SHEET 4 AA2 5 CYS A 235 PHE A 238 1 O PHE A 237 N PHE A 207 SHEET 5 AA2 5 LYS A 260 ASP A 263 1 O TYR A 262 N LEU A 236 SHEET 1 AA3 3 VAL A 276 ALA A 277 0 SHEET 2 AA3 3 MET A 286 CYS A 288 -1 O LEU A 287 N ALA A 277 SHEET 3 AA3 3 ARG A 350 LEU A 351 -1 O LEU A 351 N MET A 286 SHEET 1 AA4 3 ILE A 293 CYS A 298 0 SHEET 2 AA4 3 ARG A 311 HIS A 318 -1 O THR A 313 N CYS A 298 SHEET 3 AA4 3 LEU A 329 LEU A 330 -1 O LEU A 329 N TYR A 316 SHEET 1 AA5 4 ILE A 293 CYS A 298 0 SHEET 2 AA5 4 ARG A 311 HIS A 318 -1 O THR A 313 N CYS A 298 SHEET 3 AA5 4 ASP A 333 LEU A 336 -1 O THR A 335 N GLY A 312 SHEET 4 AA5 4 ILE A 355 ARG A 358 -1 O PHE A 356 N LEU A 334 SHEET 1 AA6 2 PHE A 363 ILE A 365 0 SHEET 2 AA6 2 GLU A 368 ILE A 370 -1 O ILE A 370 N PHE A 363 SHEET 1 AA7 4 LYS A 440 LEU A 443 0 SHEET 2 AA7 4 GLU A 401 PRO A 408 1 N LEU A 402 O LYS A 440 SHEET 3 AA7 4 TYR A 385 THR A 394 -1 N GLY A 386 O GLU A 407 SHEET 4 AA7 4 VAL A 459 ASP A 461 1 O ILE A 460 N ILE A 393 CISPEP 1 PHE A 6 PRO A 7 0 -6.70 CISPEP 2 PRO A 97 PRO A 98 0 2.39 CISPEP 3 SER A 271 PRO A 272 0 5.68 SITE 1 AC1 21 SER A 239 GLY A 240 GLU A 241 PRO A 242 SITE 2 AC1 21 ASP A 263 CYS A 264 GLY A 265 SER A 266 SITE 3 AC1 21 MET A 267 ALA A 268 GLU A 269 PHE A 273 SITE 4 AC1 21 ASP A 333 ILE A 355 ARG A 358 ASN A 369 SITE 5 AC1 21 AMP A1002 HOH A1118 HOH A1138 HOH A1146 SITE 6 AC1 21 HOH A1213 SITE 1 AC2 19 LYS A 86 GLY A 240 GLU A 241 PRO A 242 SITE 2 AC2 19 ASP A 263 CYS A 264 GLY A 265 SER A 266 SITE 3 AC2 19 MET A 267 ALA A 268 GLU A 269 ASP A 333 SITE 4 AC2 19 ILE A 355 ARG A 358 ASN A 369 8LE A1001 SITE 5 AC2 19 HOH A1118 HOH A1146 HOH A1213 SITE 1 AC3 25 TYR A 164 ALA A 186 GLY A 187 ALA A 188 SITE 2 AC3 25 PRO A 189 GLY A 190 SER A 192 TYR A 208 SITE 3 AC3 25 GLY A 209 THR A 210 TYR A 213 HIS A 216 SITE 4 AC3 25 SER A 239 ARG A 366 GLY A 367 MET A 399 SITE 5 AC3 25 VAL A 437 ARG A 438 HOH A1103 HOH A1131 SITE 6 AC3 25 HOH A1159 HOH A1179 HOH A1204 HOH A1215 SITE 7 AC3 25 HOH A1261 CRYST1 95.054 95.054 100.742 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010520 0.006074 0.000000 0.00000 SCALE2 0.000000 0.012148 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009926 0.00000