data_6HEQ # _entry.id 6HEQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6HEQ WWPDB D_1200011572 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6HEQ _pdbx_database_status.recvd_initial_deposition_date 2018-08-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Soror, S.H.' 1 0000-0001-6474-8884 'Abskharon, R.N.' 2 0000-0003-1350-0189 'Wohlkonig, A.' 3 0000-0003-3103-5022 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? US ? ? primary 'Plos Pathog.' ? ? 1553-7374 ? ? 15 ? e1008139 e1008139 'Structural evidence for the critical role of the prion protein hydrophobic region in forming an infectious prion.' 2019 ? 10.1371/journal.ppat.1008139 31815959 ? ? ? ? ? ? ? ? DK ? ? 1 'Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun.' ? ? 1744-3091 ? ? 66 ? 1644 1646 'Crystallization and preliminary X-ray diffraction analysis of a specific VHH domain against mouse prion protein' 2010 ? 10.1107/S1744309110042168 21139215 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Abskharon, R.' 1 ? primary 'Wang, F.' 2 0000-0003-1798-0829 primary 'Wohlkonig, A.' 3 ? primary 'Ruan, J.' 4 ? primary 'Soror, S.' 5 0000-0001-6474-8884 primary 'Giachin, G.' 6 0000-0001-7550-0307 primary 'Pardon, E.' 7 ? primary 'Zou, W.' 8 ? primary 'Legname, G.' 9 ? primary 'Ma, J.' 10 ? primary 'Steyaert, J.' 11 ? 1 'Abskharon, R.' 12 ? 1 'Soror, s.' 13 ? 1 'Pardon, E.' 14 ? 1 'Legname, G.' 15 ? 1 'Steyaert, J.' 16 ? 1 'Wohlkonig, A.' 17 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6HEQ _cell.details ? _cell.formula_units_Z ? _cell.length_a 30.040 _cell.length_a_esd ? _cell.length_b 37.150 _cell.length_b_esd ? _cell.length_c 83.000 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6HEQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Prion nanobody 484' 13360.841 1 ? ? ? ? 2 water nat water 18.015 95 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;VQLQESGGGLVQPGGSLRLSCAASGRTFSSYNMGWFRQAPGKGREFVASITSSGDKSDYTDSVKGRFTISRDNAKNTMYL QMNNLKPEDTATYYCARGLGIYIIRARGGYDHWQQGTQVTVS ; _entity_poly.pdbx_seq_one_letter_code_can ;VQLQESGGGLVQPGGSLRLSCAASGRTFSSYNMGWFRQAPGKGREFVASITSSGDKSDYTDSVKGRFTISRDNAKNTMYL QMNNLKPEDTATYYCARGLGIYIIRARGGYDHWQQGTQVTVS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 GLN n 1 3 LEU n 1 4 GLN n 1 5 GLU n 1 6 SER n 1 7 GLY n 1 8 GLY n 1 9 GLY n 1 10 LEU n 1 11 VAL n 1 12 GLN n 1 13 PRO n 1 14 GLY n 1 15 GLY n 1 16 SER n 1 17 LEU n 1 18 ARG n 1 19 LEU n 1 20 SER n 1 21 CYS n 1 22 ALA n 1 23 ALA n 1 24 SER n 1 25 GLY n 1 26 ARG n 1 27 THR n 1 28 PHE n 1 29 SER n 1 30 SER n 1 31 TYR n 1 32 ASN n 1 33 MET n 1 34 GLY n 1 35 TRP n 1 36 PHE n 1 37 ARG n 1 38 GLN n 1 39 ALA n 1 40 PRO n 1 41 GLY n 1 42 LYS n 1 43 GLY n 1 44 ARG n 1 45 GLU n 1 46 PHE n 1 47 VAL n 1 48 ALA n 1 49 SER n 1 50 ILE n 1 51 THR n 1 52 SER n 1 53 SER n 1 54 GLY n 1 55 ASP n 1 56 LYS n 1 57 SER n 1 58 ASP n 1 59 TYR n 1 60 THR n 1 61 ASP n 1 62 SER n 1 63 VAL n 1 64 LYS n 1 65 GLY n 1 66 ARG n 1 67 PHE n 1 68 THR n 1 69 ILE n 1 70 SER n 1 71 ARG n 1 72 ASP n 1 73 ASN n 1 74 ALA n 1 75 LYS n 1 76 ASN n 1 77 THR n 1 78 MET n 1 79 TYR n 1 80 LEU n 1 81 GLN n 1 82 MET n 1 83 ASN n 1 84 ASN n 1 85 LEU n 1 86 LYS n 1 87 PRO n 1 88 GLU n 1 89 ASP n 1 90 THR n 1 91 ALA n 1 92 THR n 1 93 TYR n 1 94 TYR n 1 95 CYS n 1 96 ALA n 1 97 ARG n 1 98 GLY n 1 99 LEU n 1 100 GLY n 1 101 ILE n 1 102 TYR n 1 103 ILE n 1 104 ILE n 1 105 ARG n 1 106 ALA n 1 107 ARG n 1 108 GLY n 1 109 GLY n 1 110 TYR n 1 111 ASP n 1 112 HIS n 1 113 TRP n 1 114 GLN n 1 115 GLN n 1 116 GLY n 1 117 THR n 1 118 GLN n 1 119 VAL n 1 120 THR n 1 121 VAL n 1 122 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 122 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Camelus dromedarius' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9838 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6HEQ _struct_ref.pdbx_db_accession 6HEQ _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6HEQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 122 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6HEQ _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 123 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 123 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6HEQ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.5 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 25.68 _exptl_crystal.description plates _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;30% PEG4K, 0.2M MgCl2, 0.1M Tris pH 8.5 ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-03-27 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Asymmetric Laue 001' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.933 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID14-2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.933 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID14-2 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6HEQ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.23 _reflns.d_resolution_low 17.85 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 26127 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.19 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.99 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.23 _reflns_shell.d_res_low 1.258 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 0.00 _refine.B_iso_max ? _refine.B_iso_mean 11.698 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.937 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6HEQ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.23 _refine.ls_d_res_low 17.85 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 26127 _refine.ls_number_reflns_R_free 1382 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.19 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.20009 _refine.ls_R_factor_R_free 0.22398 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.19886 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.054 _refine.pdbx_overall_ESU_R_Free 0.056 _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 0.713 _refine.overall_SU_ML 0.033 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 929 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 95 _refine_hist.number_atoms_total 1024 _refine_hist.d_res_high 1.23 _refine_hist.d_res_low 17.85 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 0.021 948 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.307 1.937 1278 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.353 5.000 121 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 31.398 22.558 43 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 11.772 15.000 153 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 14.480 15.000 9 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.089 0.200 133 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 0.020 731 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 0.823 1.500 596 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.500 2.000 944 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.147 3.000 352 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 3.182 4.500 334 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.226 _refine_ls_shell.d_res_low 1.258 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 113 _refine_ls_shell.number_reflns_R_work 1836 _refine_ls_shell.percent_reflns_obs 96.01 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.206 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.226 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6HEQ _struct.title 'Prion nanobody 484' _struct.pdbx_descriptor 'Nanobody for prion' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6HEQ _struct_keywords.text 'Nanobody, aggregation, beta fold, PROTEIN BINDING' _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 27 ? SER A 29 ? THR A 28 SER A 30 5 ? 3 HELX_P HELX_P2 AA2 ASP A 61 ? LYS A 64 ? ASP A 62 LYS A 65 5 ? 4 HELX_P HELX_P3 AA3 LYS A 86 ? THR A 90 ? LYS A 87 THR A 91 5 ? 5 HELX_P HELX_P4 AA4 ALA A 106 ? TYR A 110 ? ALA A 107 TYR A 111 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 21 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 95 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 22 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 96 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.015 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 6 ? AA3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 4 ? SER A 6 ? GLN A 5 SER A 7 AA1 2 LEU A 17 ? ALA A 22 ? LEU A 18 ALA A 23 AA1 3 THR A 77 ? MET A 82 ? THR A 78 MET A 83 AA1 4 PHE A 67 ? ASP A 72 ? PHE A 68 ASP A 73 AA2 1 GLY A 9 ? VAL A 11 ? GLY A 10 VAL A 12 AA2 2 THR A 117 ? VAL A 121 ? THR A 118 VAL A 122 AA2 3 ALA A 91 ? LEU A 99 ? ALA A 92 LEU A 100 AA2 4 TYR A 31 ? GLN A 38 ? TYR A 32 GLN A 39 AA2 5 GLU A 45 ? ILE A 50 ? GLU A 46 ILE A 51 AA2 6 SER A 57 ? TYR A 59 ? SER A 58 TYR A 60 AA3 1 GLY A 9 ? VAL A 11 ? GLY A 10 VAL A 12 AA3 2 THR A 117 ? VAL A 121 ? THR A 118 VAL A 122 AA3 3 ALA A 91 ? LEU A 99 ? ALA A 92 LEU A 100 AA3 4 HIS A 112 ? TRP A 113 ? HIS A 113 TRP A 114 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN A 4 ? N GLN A 5 O ALA A 22 ? O ALA A 23 AA1 2 3 N LEU A 17 ? N LEU A 18 O MET A 82 ? O MET A 83 AA1 3 4 O THR A 77 ? O THR A 78 N ASP A 72 ? N ASP A 73 AA2 1 2 N GLY A 9 ? N GLY A 10 O GLN A 118 ? O GLN A 119 AA2 2 3 O THR A 117 ? O THR A 118 N TYR A 93 ? N TYR A 94 AA2 3 4 O ALA A 96 ? O ALA A 97 N GLY A 34 ? N GLY A 35 AA2 4 5 N ARG A 37 ? N ARG A 38 O GLU A 45 ? O GLU A 46 AA2 5 6 N SER A 49 ? N SER A 50 O ASP A 58 ? O ASP A 59 AA3 1 2 N GLY A 9 ? N GLY A 10 O GLN A 118 ? O GLN A 119 AA3 2 3 O THR A 117 ? O THR A 118 N TYR A 93 ? N TYR A 94 AA3 3 4 N ARG A 97 ? N ARG A 98 O HIS A 112 ? O HIS A 113 # _atom_sites.entry_id 6HEQ _atom_sites.fract_transf_matrix[1][1] 0.033289 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026918 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012048 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 2 2 VAL VAL A . n A 1 2 GLN 2 3 3 GLN GLN A . n A 1 3 LEU 3 4 4 LEU LEU A . n A 1 4 GLN 4 5 5 GLN GLN A . n A 1 5 GLU 5 6 6 GLU GLU A . n A 1 6 SER 6 7 7 SER SER A . n A 1 7 GLY 7 8 8 GLY GLY A . n A 1 8 GLY 8 9 9 GLY GLY A . n A 1 9 GLY 9 10 10 GLY GLY A . n A 1 10 LEU 10 11 11 LEU LEU A . n A 1 11 VAL 11 12 12 VAL VAL A . n A 1 12 GLN 12 13 13 GLN GLN A . n A 1 13 PRO 13 14 14 PRO PRO A . n A 1 14 GLY 14 15 15 GLY GLY A . n A 1 15 GLY 15 16 16 GLY GLY A . n A 1 16 SER 16 17 17 SER SER A . n A 1 17 LEU 17 18 18 LEU LEU A . n A 1 18 ARG 18 19 19 ARG ARG A . n A 1 19 LEU 19 20 20 LEU LEU A . n A 1 20 SER 20 21 21 SER SER A . n A 1 21 CYS 21 22 22 CYS CYS A . n A 1 22 ALA 22 23 23 ALA ALA A . n A 1 23 ALA 23 24 24 ALA ALA A . n A 1 24 SER 24 25 25 SER SER A . n A 1 25 GLY 25 26 26 GLY GLY A . n A 1 26 ARG 26 27 27 ARG ARG A . n A 1 27 THR 27 28 28 THR THR A . n A 1 28 PHE 28 29 29 PHE PHE A . n A 1 29 SER 29 30 30 SER SER A . n A 1 30 SER 30 31 31 SER SER A . n A 1 31 TYR 31 32 32 TYR TYR A . n A 1 32 ASN 32 33 33 ASN ASN A . n A 1 33 MET 33 34 34 MET MET A . n A 1 34 GLY 34 35 35 GLY GLY A . n A 1 35 TRP 35 36 36 TRP TRP A . n A 1 36 PHE 36 37 37 PHE PHE A . n A 1 37 ARG 37 38 38 ARG ARG A . n A 1 38 GLN 38 39 39 GLN GLN A . n A 1 39 ALA 39 40 40 ALA ALA A . n A 1 40 PRO 40 41 41 PRO PRO A . n A 1 41 GLY 41 42 42 GLY GLY A . n A 1 42 LYS 42 43 43 LYS LYS A . n A 1 43 GLY 43 44 44 GLY GLY A . n A 1 44 ARG 44 45 45 ARG ARG A . n A 1 45 GLU 45 46 46 GLU GLU A . n A 1 46 PHE 46 47 47 PHE PHE A . n A 1 47 VAL 47 48 48 VAL VAL A . n A 1 48 ALA 48 49 49 ALA ALA A . n A 1 49 SER 49 50 50 SER SER A . n A 1 50 ILE 50 51 51 ILE ILE A . n A 1 51 THR 51 52 52 THR THR A . n A 1 52 SER 52 53 53 SER SER A . n A 1 53 SER 53 54 54 SER SER A . n A 1 54 GLY 54 55 55 GLY GLY A . n A 1 55 ASP 55 56 56 ASP ASP A . n A 1 56 LYS 56 57 57 LYS LYS A . n A 1 57 SER 57 58 58 SER SER A . n A 1 58 ASP 58 59 59 ASP ASP A . n A 1 59 TYR 59 60 60 TYR TYR A . n A 1 60 THR 60 61 61 THR THR A . n A 1 61 ASP 61 62 62 ASP ASP A . n A 1 62 SER 62 63 63 SER SER A . n A 1 63 VAL 63 64 64 VAL VAL A . n A 1 64 LYS 64 65 65 LYS LYS A . n A 1 65 GLY 65 66 66 GLY GLY A . n A 1 66 ARG 66 67 67 ARG ARG A . n A 1 67 PHE 67 68 68 PHE PHE A . n A 1 68 THR 68 69 69 THR THR A . n A 1 69 ILE 69 70 70 ILE ILE A . n A 1 70 SER 70 71 71 SER SER A . n A 1 71 ARG 71 72 72 ARG ARG A . n A 1 72 ASP 72 73 73 ASP ASP A . n A 1 73 ASN 73 74 74 ASN ASN A . n A 1 74 ALA 74 75 75 ALA ALA A . n A 1 75 LYS 75 76 76 LYS LYS A . n A 1 76 ASN 76 77 77 ASN ASN A . n A 1 77 THR 77 78 78 THR THR A . n A 1 78 MET 78 79 79 MET MET A . n A 1 79 TYR 79 80 80 TYR TYR A . n A 1 80 LEU 80 81 81 LEU LEU A . n A 1 81 GLN 81 82 82 GLN GLN A . n A 1 82 MET 82 83 83 MET MET A . n A 1 83 ASN 83 84 84 ASN ASN A . n A 1 84 ASN 84 85 85 ASN ASN A . n A 1 85 LEU 85 86 86 LEU LEU A . n A 1 86 LYS 86 87 87 LYS LYS A . n A 1 87 PRO 87 88 88 PRO PRO A . n A 1 88 GLU 88 89 89 GLU GLU A . n A 1 89 ASP 89 90 90 ASP ASP A . n A 1 90 THR 90 91 91 THR THR A . n A 1 91 ALA 91 92 92 ALA ALA A . n A 1 92 THR 92 93 93 THR THR A . n A 1 93 TYR 93 94 94 TYR TYR A . n A 1 94 TYR 94 95 95 TYR TYR A . n A 1 95 CYS 95 96 96 CYS CYS A . n A 1 96 ALA 96 97 97 ALA ALA A . n A 1 97 ARG 97 98 98 ARG ARG A . n A 1 98 GLY 98 99 99 GLY GLY A . n A 1 99 LEU 99 100 100 LEU LEU A . n A 1 100 GLY 100 101 101 GLY GLY A . n A 1 101 ILE 101 102 102 ILE ILE A . n A 1 102 TYR 102 103 103 TYR TYR A . n A 1 103 ILE 103 104 104 ILE ILE A . n A 1 104 ILE 104 105 105 ILE ILE A . n A 1 105 ARG 105 106 106 ARG ARG A . n A 1 106 ALA 106 107 107 ALA ALA A . n A 1 107 ARG 107 108 108 ARG ARG A . n A 1 108 GLY 108 109 109 GLY GLY A . n A 1 109 GLY 109 110 110 GLY GLY A . n A 1 110 TYR 110 111 111 TYR TYR A . n A 1 111 ASP 111 112 112 ASP ASP A . n A 1 112 HIS 112 113 113 HIS HIS A . n A 1 113 TRP 113 114 114 TRP TRP A . n A 1 114 GLN 114 115 115 GLN GLN A . n A 1 115 GLN 115 116 116 GLN GLN A . n A 1 116 GLY 116 117 117 GLY GLY A . n A 1 117 THR 117 118 118 THR THR A . n A 1 118 GLN 118 119 119 GLN GLN A . n A 1 119 VAL 119 120 120 VAL VAL A . n A 1 120 THR 120 121 121 THR THR A . n A 1 121 VAL 121 122 122 VAL VAL A . n A 1 122 SER 122 123 123 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 201 42 HOH HOH A . B 2 HOH 2 202 74 HOH HOH A . B 2 HOH 3 203 81 HOH HOH A . B 2 HOH 4 204 63 HOH HOH A . B 2 HOH 5 205 44 HOH HOH A . B 2 HOH 6 206 73 HOH HOH A . B 2 HOH 7 207 33 HOH HOH A . B 2 HOH 8 208 61 HOH HOH A . B 2 HOH 9 209 89 HOH HOH A . B 2 HOH 10 210 56 HOH HOH A . B 2 HOH 11 211 70 HOH HOH A . B 2 HOH 12 212 66 HOH HOH A . B 2 HOH 13 213 25 HOH HOH A . B 2 HOH 14 214 38 HOH HOH A . B 2 HOH 15 215 46 HOH HOH A . B 2 HOH 16 216 7 HOH HOH A . B 2 HOH 17 217 23 HOH HOH A . B 2 HOH 18 218 10 HOH HOH A . B 2 HOH 19 219 72 HOH HOH A . B 2 HOH 20 220 16 HOH HOH A . B 2 HOH 21 221 5 HOH HOH A . B 2 HOH 22 222 93 HOH HOH A . B 2 HOH 23 223 45 HOH HOH A . B 2 HOH 24 224 62 HOH HOH A . B 2 HOH 25 225 13 HOH HOH A . B 2 HOH 26 226 90 HOH HOH A . B 2 HOH 27 227 1 HOH HOH A . B 2 HOH 28 228 51 HOH HOH A . B 2 HOH 29 229 4 HOH HOH A . B 2 HOH 30 230 17 HOH HOH A . B 2 HOH 31 231 92 HOH HOH A . B 2 HOH 32 232 22 HOH HOH A . B 2 HOH 33 233 58 HOH HOH A . B 2 HOH 34 234 36 HOH HOH A . B 2 HOH 35 235 59 HOH HOH A . B 2 HOH 36 236 69 HOH HOH A . B 2 HOH 37 237 39 HOH HOH A . B 2 HOH 38 238 27 HOH HOH A . B 2 HOH 39 239 75 HOH HOH A . B 2 HOH 40 240 26 HOH HOH A . B 2 HOH 41 241 54 HOH HOH A . B 2 HOH 42 242 21 HOH HOH A . B 2 HOH 43 243 24 HOH HOH A . B 2 HOH 44 244 32 HOH HOH A . B 2 HOH 45 245 28 HOH HOH A . B 2 HOH 46 246 15 HOH HOH A . B 2 HOH 47 247 77 HOH HOH A . B 2 HOH 48 248 37 HOH HOH A . B 2 HOH 49 249 83 HOH HOH A . B 2 HOH 50 250 40 HOH HOH A . B 2 HOH 51 251 60 HOH HOH A . B 2 HOH 52 252 65 HOH HOH A . B 2 HOH 53 253 31 HOH HOH A . B 2 HOH 54 254 6 HOH HOH A . B 2 HOH 55 255 64 HOH HOH A . B 2 HOH 56 256 50 HOH HOH A . B 2 HOH 57 257 19 HOH HOH A . B 2 HOH 58 258 29 HOH HOH A . B 2 HOH 59 259 43 HOH HOH A . B 2 HOH 60 260 48 HOH HOH A . B 2 HOH 61 261 80 HOH HOH A . B 2 HOH 62 262 82 HOH HOH A . B 2 HOH 63 263 94 HOH HOH A . B 2 HOH 64 264 55 HOH HOH A . B 2 HOH 65 265 35 HOH HOH A . B 2 HOH 66 266 2 HOH HOH A . B 2 HOH 67 267 53 HOH HOH A . B 2 HOH 68 268 8 HOH HOH A . B 2 HOH 69 269 84 HOH HOH A . B 2 HOH 70 270 11 HOH HOH A . B 2 HOH 71 271 20 HOH HOH A . B 2 HOH 72 272 30 HOH HOH A . B 2 HOH 73 273 18 HOH HOH A . B 2 HOH 74 274 47 HOH HOH A . B 2 HOH 75 275 87 HOH HOH A . B 2 HOH 76 276 3 HOH HOH A . B 2 HOH 77 277 34 HOH HOH A . B 2 HOH 78 278 88 HOH HOH A . B 2 HOH 79 279 49 HOH HOH A . B 2 HOH 80 280 86 HOH HOH A . B 2 HOH 81 281 78 HOH HOH A . B 2 HOH 82 282 14 HOH HOH A . B 2 HOH 83 283 41 HOH HOH A . B 2 HOH 84 284 9 HOH HOH A . B 2 HOH 85 285 91 HOH HOH A . B 2 HOH 86 286 12 HOH HOH A . B 2 HOH 87 287 52 HOH HOH A . B 2 HOH 88 288 57 HOH HOH A . B 2 HOH 89 289 71 HOH HOH A . B 2 HOH 90 290 68 HOH HOH A . B 2 HOH 91 291 95 HOH HOH A . B 2 HOH 92 292 67 HOH HOH A . B 2 HOH 93 293 85 HOH HOH A . B 2 HOH 94 294 76 HOH HOH A . B 2 HOH 95 295 79 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 6160 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-12-04 2 'Structure model' 1 1 2019-12-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_citation_author.identifier_ORCID' 13 2 'Structure model' '_citation_author.name' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.5.0109 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 92 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 179.38 _pdbx_validate_torsion.psi 168.93 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 115 ? CG ? A GLN 114 CG 2 1 Y 1 A GLN 115 ? CD ? A GLN 114 CD 3 1 Y 1 A GLN 115 ? OE1 ? A GLN 114 OE1 4 1 Y 1 A GLN 115 ? NE2 ? A GLN 114 NE2 5 1 Y 1 A GLN 116 ? CG ? A GLN 115 CG 6 1 Y 1 A GLN 116 ? CD ? A GLN 115 CD 7 1 Y 1 A GLN 116 ? OE1 ? A GLN 115 OE1 8 1 Y 1 A GLN 116 ? NE2 ? A GLN 115 NE2 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #