HEADER STRUCTURAL PROTEIN 22-AUG-18 6HG7 TITLE CRYSTAL STRUCTURE OF A COLLAGEN II FRAGMENT CONTAINING THE BINDING TITLE 2 SITE OF PEDF AND COMP, (POG)4-LKG HRG FTG LQG-POG(4) COMPND MOL_ID: 1; COMPND 2 MOLECULE: COLLAGEN ALPHA-1(II) CHAIN; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: C-TERMINAL PEDF/COMP BINDING REGION OF COLLAGEN II; COMPND 5 SYNONYM: ALPHA-1 TYPE II COLLAGEN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606 KEYWDS COLLAGEN HELIX, COLLAGEN-LIKE PEPTIDE, COLLAGEN II, STRUCTURAL KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.M.GEBAUER,A.KOEHLER,H.DIETMAR,M.GOMPERT,I.NEUNDORF,F.ZAUCKE,M.KOCH, AUTHOR 2 U.BAUMANN REVDAT 4 17-JAN-24 6HG7 1 REMARK REVDAT 3 16-OCT-19 6HG7 1 REMARK REVDAT 2 19-JUN-19 6HG7 1 COMPND SOURCE REMARK DBREF REVDAT 2 2 1 SEQADV SEQRES HET HETNAM REVDAT 2 3 1 HETSYN FORMUL LINK SITE REVDAT 2 4 1 ATOM REVDAT 1 05-DEC-18 6HG7 0 JRNL AUTH J.M.GEBAUER,A.KOHLER,H.DIETMAR,M.GOMPERT,I.NEUNDORF, JRNL AUTH 2 F.ZAUCKE,M.KOCH,U.BAUMANN JRNL TITL COMP AND TSP-4 INTERACT SPECIFICALLY WITH THE NOVEL GXKGHR JRNL TITL 2 MOTIF ONLY FOUND IN FIBRILLAR COLLAGENS. JRNL REF SCI REP V. 8 17187 2018 JRNL REFN ESSN 2045-2322 JRNL PMID 30464261 JRNL DOI 10.1038/S41598-018-35447-8 REMARK 2 REMARK 2 RESOLUTION. 1.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 43777 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2211 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.0400 - 2.5200 0.99 2721 143 0.1736 0.2183 REMARK 3 2 2.5200 - 2.0000 0.99 2636 124 0.1454 0.1736 REMARK 3 3 2.0000 - 1.7500 1.00 2652 131 0.1409 0.1722 REMARK 3 4 1.7500 - 1.5900 1.00 2573 144 0.1311 0.1586 REMARK 3 5 1.5900 - 1.4700 1.00 2629 127 0.1383 0.1761 REMARK 3 6 1.4700 - 1.3900 0.99 2584 131 0.1288 0.1830 REMARK 3 7 1.3900 - 1.3200 1.00 2595 131 0.1246 0.1544 REMARK 3 8 1.3200 - 1.2600 1.00 2592 152 0.1313 0.1832 REMARK 3 9 1.2600 - 1.2100 1.00 2580 141 0.1337 0.1423 REMARK 3 10 1.2100 - 1.1700 1.00 2601 131 0.1332 0.1809 REMARK 3 11 1.1700 - 1.1300 1.00 2573 140 0.1393 0.1490 REMARK 3 12 1.1300 - 1.1000 1.00 2581 153 0.1542 0.1890 REMARK 3 13 1.1000 - 1.0700 1.00 2584 134 0.1759 0.1919 REMARK 3 14 1.0700 - 1.0500 0.99 2608 123 0.1860 0.2302 REMARK 3 15 1.0500 - 1.0200 0.99 2520 158 0.1952 0.2150 REMARK 3 16 1.0200 - 1.0000 0.99 2537 148 0.2337 0.2682 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.091 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.463 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 9.94 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 805 REMARK 3 ANGLE : 1.536 1104 REMARK 3 CHIRALITY : 0.068 107 REMARK 3 PLANARITY : 0.006 142 REMARK 3 DIHEDRAL : 10.255 275 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6HG7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1200011004. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.80000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47365 REMARK 200 RESOLUTION RANGE HIGH (A) : 0.980 REMARK 200 RESOLUTION RANGE LOW (A) : 31.020 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 0.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 0.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.81200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4AXY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M AMMONIUM SULPHATE AND 0.1 M BIS REMARK 280 -TRIS PROPANE PH 7.0, EVAPORATION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 13.44081 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 11.82000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.90950 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 13.44081 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 11.82000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 53.90950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH12 ARG C 17 O HOH C 201 1.58 REMARK 500 O HOH B 246 O HOH B 248 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HE2 HIS A 16 H THR A 20 2555 1.22 REMARK 500 O HOH C 201 O HOH C 201 2555 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 248 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH B 249 DISTANCE = 7.31 ANGSTROMS REMARK 525 HOH B 250 DISTANCE = 7.50 ANGSTROMS REMARK 525 HOH B 251 DISTANCE = 7.65 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE B 0 and PRO B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PRO B 1 and HYP B 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HYP B 2 and GLY B 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PRO B 4 and HYP B 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HYP B 5 and GLY B 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PRO B 10 and HYP B REMARK 800 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HYP B 11 and GLY B REMARK 800 12 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PRO B 31 and HYP B REMARK 800 32 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HYP B 32 and GLY B REMARK 800 33 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PRO B 34 and HYP B REMARK 800 35 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HYP B 35 and GLY B REMARK 800 36 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide GLY B 36 and NH2 B REMARK 800 37 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide ACE C 0 and PRO C 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PRO C 1 and HYP C 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HYP C 2 and GLY C 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PRO C 4 and HYP C 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HYP C 5 and GLY C 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PRO C 10 and HYP C REMARK 800 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HYP C 11 and GLY C REMARK 800 12 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PRO C 31 and HYP C REMARK 800 32 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HYP C 32 and GLY C REMARK 800 33 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PRO C 34 and HYP C REMARK 800 35 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide HYP C 35 and GLY C REMARK 800 36 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide GLY C 36 and NH2 C REMARK 800 37 DBREF 6HG7 A 0 37 UNP P02458 CO2A1_HUMAN 1116 1153 DBREF 6HG7 B 0 37 UNP P02458 CO2A1_HUMAN 1116 1153 DBREF 6HG7 C 0 37 UNP P02458 CO2A1_HUMAN 1116 1153 SEQADV 6HG7 ACE A 0 UNP P02458 GLY 1116 CONFLICT SEQADV 6HG7 PRO A 1 UNP P02458 ASP 1117 CONFLICT SEQADV 6HG7 HYP A 2 UNP P02458 LYS 1118 CONFLICT SEQADV 6HG7 PRO A 4 UNP P02458 GLU 1120 CONFLICT SEQADV 6HG7 HYP A 5 UNP P02458 ALA 1121 CONFLICT SEQADV 6HG7 PRO A 7 UNP P02458 GLU 1123 CONFLICT SEQADV 6HG7 PRO A 10 UNP P02458 GLU 1126 CONFLICT SEQADV 6HG7 HYP A 11 UNP P02458 ARG 1127 CONFLICT SEQADV 6HG7 PRO A 25 UNP P02458 LEU 1141 CONFLICT SEQADV 6HG7 HYP A 32 UNP P02458 SER 1148 CONFLICT SEQADV 6HG7 PRO A 34 UNP P02458 ASP 1150 CONFLICT SEQADV 6HG7 HYP A 35 UNP P02458 GLN 1151 CONFLICT SEQADV 6HG7 NH2 A 37 UNP P02458 ALA 1153 CONFLICT SEQADV 6HG7 ACE B 0 UNP P02458 GLY 1116 CONFLICT SEQADV 6HG7 PRO B 1 UNP P02458 ASP 1117 CONFLICT SEQADV 6HG7 HYP B 2 UNP P02458 LYS 1118 CONFLICT SEQADV 6HG7 PRO B 4 UNP P02458 GLU 1120 CONFLICT SEQADV 6HG7 HYP B 5 UNP P02458 ALA 1121 CONFLICT SEQADV 6HG7 PRO B 7 UNP P02458 GLU 1123 CONFLICT SEQADV 6HG7 PRO B 10 UNP P02458 GLU 1126 CONFLICT SEQADV 6HG7 HYP B 11 UNP P02458 ARG 1127 CONFLICT SEQADV 6HG7 PRO B 25 UNP P02458 LEU 1141 CONFLICT SEQADV 6HG7 HYP B 32 UNP P02458 SER 1148 CONFLICT SEQADV 6HG7 PRO B 34 UNP P02458 ASP 1150 CONFLICT SEQADV 6HG7 HYP B 35 UNP P02458 GLN 1151 CONFLICT SEQADV 6HG7 NH2 B 37 UNP P02458 ALA 1153 CONFLICT SEQADV 6HG7 ACE C 0 UNP P02458 GLY 1116 CONFLICT SEQADV 6HG7 PRO C 1 UNP P02458 ASP 1117 CONFLICT SEQADV 6HG7 HYP C 2 UNP P02458 LYS 1118 CONFLICT SEQADV 6HG7 PRO C 4 UNP P02458 GLU 1120 CONFLICT SEQADV 6HG7 HYP C 5 UNP P02458 ALA 1121 CONFLICT SEQADV 6HG7 PRO C 7 UNP P02458 GLU 1123 CONFLICT SEQADV 6HG7 PRO C 10 UNP P02458 GLU 1126 CONFLICT SEQADV 6HG7 HYP C 11 UNP P02458 ARG 1127 CONFLICT SEQADV 6HG7 PRO C 25 UNP P02458 LEU 1141 CONFLICT SEQADV 6HG7 HYP C 32 UNP P02458 SER 1148 CONFLICT SEQADV 6HG7 PRO C 34 UNP P02458 ASP 1150 CONFLICT SEQADV 6HG7 HYP C 35 UNP P02458 GLN 1151 CONFLICT SEQADV 6HG7 NH2 C 37 UNP P02458 ALA 1153 CONFLICT SEQRES 1 A 38 ACE PRO HYP GLY PRO HYP GLY PRO HYP GLY PRO HYP GLY SEQRES 2 A 38 LEU LYS GLY HIS ARG GLY PHE THR GLY LEU GLN GLY PRO SEQRES 3 A 38 HYP GLY PRO HYP GLY PRO HYP GLY PRO HYP GLY NH2 SEQRES 1 B 38 ACE PRO HYP GLY PRO HYP GLY PRO HYP GLY PRO HYP GLY SEQRES 2 B 38 LEU LYS GLY HIS ARG GLY PHE THR GLY LEU GLN GLY PRO SEQRES 3 B 38 HYP GLY PRO HYP GLY PRO HYP GLY PRO HYP GLY NH2 SEQRES 1 C 38 ACE PRO HYP GLY PRO HYP GLY PRO HYP GLY PRO HYP GLY SEQRES 2 C 38 LEU LYS GLY HIS ARG GLY PHE THR GLY LEU GLN GLY PRO SEQRES 3 C 38 HYP GLY PRO HYP GLY PRO HYP GLY PRO HYP GLY NH2 MODRES 6HG7 HYP A 8 PRO MODIFIED RESIDUE MODRES 6HG7 HYP A 26 PRO MODIFIED RESIDUE MODRES 6HG7 HYP A 29 PRO MODIFIED RESIDUE MODRES 6HG7 HYP B 8 PRO MODIFIED RESIDUE MODRES 6HG7 HYP B 26 PRO MODIFIED RESIDUE MODRES 6HG7 HYP B 29 PRO MODIFIED RESIDUE MODRES 6HG7 HYP C 8 PRO MODIFIED RESIDUE MODRES 6HG7 HYP C 26 PRO MODIFIED RESIDUE MODRES 6HG7 HYP C 29 PRO MODIFIED RESIDUE HET ACE A 0 6 HET HYP A 2 14 HET HYP A 5 15 HET HYP A 8 15 HET HYP A 11 15 HET HYP A 26 15 HET HYP A 29 15 HET HYP A 32 15 HET HYP A 35 15 HET NH2 A 37 1 HET ACE B 0 6 HET HYP B 2 15 HET HYP B 5 15 HET HYP B 8 15 HET HYP B 11 15 HET HYP B 26 15 HET HYP B 29 15 HET HYP B 32 15 HET HYP B 35 15 HET NH2 B 37 1 HET ACE C 0 6 HET HYP C 2 15 HET HYP C 5 15 HET HYP C 8 15 HET HYP C 11 15 HET HYP C 26 15 HET HYP C 29 15 HET HYP C 32 15 HET HYP C 35 15 HET NH2 C 37 1 HET SO4 A 101 5 HETNAM ACE ACETYL GROUP HETNAM HYP 4-HYDROXYPROLINE HETNAM NH2 AMINO GROUP HETNAM SO4 SULFATE ION HETSYN HYP HYDROXYPROLINE FORMUL 1 ACE 3(C2 H4 O) FORMUL 1 HYP 24(C5 H9 N O3) FORMUL 1 NH2 3(H2 N) FORMUL 4 SO4 O4 S 2- FORMUL 5 HOH *164(H2 O) LINK C ACE A 0 N PRO A 1 1555 1555 1.34 LINK C PRO A 1 N HYP A 2 1555 1555 1.32 LINK C HYP A 2 N GLY A 3 1555 1555 1.33 LINK C PRO A 4 N HYP A 5 1555 1555 1.33 LINK C HYP A 5 N GLY A 6 1555 1555 1.32 LINK C PRO A 7 N HYP A 8 1555 1555 1.32 LINK C HYP A 8 N GLY A 9 1555 1555 1.31 LINK C PRO A 10 N HYP A 11 1555 1555 1.32 LINK C HYP A 11 N GLY A 12 1555 1555 1.32 LINK C PRO A 25 N HYP A 26 1555 1555 1.32 LINK C HYP A 26 N GLY A 27 1555 1555 1.33 LINK C PRO A 28 N HYP A 29 1555 1555 1.33 LINK C HYP A 29 N GLY A 30 1555 1555 1.32 LINK C PRO A 31 N HYP A 32 1555 1555 1.33 LINK C HYP A 32 N GLY A 33 1555 1555 1.33 LINK C PRO A 34 N HYP A 35 1555 1555 1.32 LINK C HYP A 35 N GLY A 36 1555 1555 1.33 LINK C GLY A 36 N NH2 A 37 1555 1555 1.39 LINK C ACE B 0 N PRO B 1 1555 1555 1.33 LINK C PRO B 1 N HYP B 2 1555 1555 1.32 LINK C HYP B 2 N GLY B 3 1555 1555 1.32 LINK C PRO B 4 N HYP B 5 1555 1555 1.33 LINK C HYP B 5 N GLY B 6 1555 1555 1.32 LINK C PRO B 7 N HYP B 8 1555 1555 1.32 LINK C HYP B 8 N GLY B 9 1555 1555 1.32 LINK C PRO B 10 N HYP B 11 1555 1555 1.33 LINK C HYP B 11 N GLY B 12 1555 1555 1.32 LINK C PRO B 25 N HYP B 26 1555 1555 1.32 LINK C HYP B 26 N GLY B 27 1555 1555 1.32 LINK C PRO B 28 N HYP B 29 1555 1555 1.33 LINK C HYP B 29 N GLY B 30 1555 1555 1.32 LINK C PRO B 31 N HYP B 32 1555 1555 1.33 LINK C HYP B 32 N GLY B 33 1555 1555 1.32 LINK C PRO B 34 N HYP B 35 1555 1555 1.32 LINK C HYP B 35 N GLY B 36 1555 1555 1.32 LINK C GLY B 36 N NH2 B 37 1555 1555 1.35 LINK C ACE C 0 N PRO C 1 1555 1555 1.33 LINK C PRO C 1 N HYP C 2 1555 1555 1.33 LINK C HYP C 2 N GLY C 3 1555 1555 1.32 LINK C PRO C 4 N HYP C 5 1555 1555 1.33 LINK C HYP C 5 N GLY C 6 1555 1555 1.32 LINK C PRO C 7 N HYP C 8 1555 1555 1.31 LINK C HYP C 8 N GLY C 9 1555 1555 1.32 LINK C PRO C 10 N HYP C 11 1555 1555 1.33 LINK C HYP C 11 N GLY C 12 1555 1555 1.32 LINK C PRO C 25 N HYP C 26 1555 1555 1.32 LINK C HYP C 26 N GLY C 27 1555 1555 1.33 LINK C PRO C 28 N HYP C 29 1555 1555 1.33 LINK C HYP C 29 N GLY C 30 1555 1555 1.32 LINK C PRO C 31 N HYP C 32 1555 1555 1.32 LINK C HYP C 32 N GLY C 33 1555 1555 1.32 LINK C PRO C 34 N HYP C 35 1555 1555 1.33 LINK C HYP C 35 N GLY C 36 1555 1555 1.33 LINK C GLY C 36 N NH2 C 37 1555 1555 1.36 SITE 1 AC1 6 NH2 A 37 HYP B 2 ARG C 17 PHE C 19 SITE 2 AC1 6 THR C 20 HOH C 228 SITE 1 AC2 5 ACE A 0 NH2 A 37 HYP B 2 HOH B 201 SITE 2 AC2 5 ACE C 0 SITE 1 AC3 9 ACE A 0 NH2 A 37 SO4 A 101 ACE B 0 SITE 2 AC3 9 GLY B 3 HOH B 201 HOH B 203 PRO C 1 SITE 3 AC3 9 HYP C 35 SITE 1 AC4 10 ACE A 0 PRO A 1 SO4 A 101 PRO B 1 SITE 2 AC4 10 PRO B 4 HOH B 203 HOH B 211 PRO C 1 SITE 3 AC4 10 GLY C 3 HYP C 35 SITE 1 AC5 11 HYP A 2 GLY A 3 GLY B 3 GLY B 6 SITE 2 AC5 11 GLN B 23 HOH B 209 HOH B 220 GLY C 3 SITE 3 AC5 11 PRO C 4 HYP C 32 HOH C 211 SITE 1 AC6 12 GLY A 3 PRO A 4 PRO B 4 PRO B 7 SITE 2 AC6 12 HOH B 209 HOH B 212 HOH B 220 PRO C 4 SITE 3 AC6 12 GLY C 6 PRO C 7 HYP C 32 HOH C 211 SITE 1 AC7 8 HYP A 8 GLY A 9 GLY B 9 GLY B 12 SITE 2 AC7 8 HOH B 208 HOH B 228 GLY C 9 PRO C 10 SITE 1 AC8 9 GLY A 9 PRO A 10 PRO B 10 LEU B 13 SITE 2 AC8 9 HOH B 208 HOH B 219 HOH B 228 PRO C 10 SITE 3 AC8 9 GLY C 12 SITE 1 AC9 10 GLY A 27 HYP A 29 GLY A 30 HYP B 26 SITE 2 AC9 10 GLY B 30 GLY B 33 HOH B 206 HOH B 212 SITE 3 AC9 10 GLY C 30 PRO C 31 SITE 1 AD1 11 GLY A 30 PRO A 31 HYP B 26 PRO B 31 SITE 2 AD1 11 PRO B 34 HOH B 205 HOH B 206 HOH B 212 SITE 3 AD1 11 PRO C 31 GLY C 33 PRO C 34 SITE 1 AD2 9 HYP A 32 GLY A 33 GLN B 23 GLY B 33 SITE 2 AD2 9 GLY B 36 HOH B 202 HOH B 207 GLY C 33 SITE 3 AD2 9 PRO C 34 SITE 1 AD3 11 GLY A 33 PRO A 34 GLN B 23 PRO B 34 SITE 2 AD3 11 NH2 B 37 HOH B 202 HOH B 207 HOH B 217 SITE 3 AD3 11 HOH B 224 PRO C 34 GLY C 36 SITE 1 AD4 10 GLY A 33 PRO A 34 HOH A 216 PRO B 34 SITE 2 AD4 10 HYP B 35 HOH B 217 HOH B 224 HOH B 226 SITE 3 AD4 10 PRO C 34 GLY C 36 SITE 1 AD5 7 ACE A 0 PRO A 1 ACE B 0 HYP B 2 SITE 2 AD5 7 GLY B 3 HYP C 2 GLY C 3 SITE 1 AD6 8 ACE A 0 PRO A 1 HYP B 2 GLY B 3 SITE 2 AD6 8 ACE C 0 GLY C 3 HOH C 204 HOH C 207 SITE 1 AD7 8 PRO A 1 GLY A 3 GLY B 3 PRO B 4 SITE 2 AD7 8 PRO C 1 PRO C 4 HOH C 204 HOH C 207 SITE 1 AD8 11 GLY A 3 PRO A 4 HYP A 5 HYP B 5 SITE 2 AD8 11 GLY B 6 GLY C 3 GLY C 6 GLN C 23 SITE 3 AD8 11 HOH C 209 HOH C 220 HOH C 230 SITE 1 AD9 11 PRO A 4 HYP A 5 GLY A 6 GLY B 6 SITE 2 AD9 11 PRO B 7 PRO C 4 PRO C 7 HOH C 209 SITE 3 AD9 11 HOH C 220 HOH C 221 HOH C 230 SITE 1 AE1 11 GLY A 9 PRO A 10 GLN A 23 HYP B 11 SITE 2 AE1 11 GLY B 12 HOH B 213 GLY C 9 GLY C 12 SITE 3 AE1 11 HOH C 210 HOH C 216 HOH C 227 SITE 1 AE2 12 PRO A 10 GLY A 12 GLN A 23 GLY B 12 SITE 2 AE2 12 LEU B 13 HOH B 213 PRO C 10 LEU C 13 SITE 3 AE2 12 HOH C 210 HOH C 216 HOH C 227 HOH C 233 SITE 1 AE3 11 GLN A 23 GLY A 30 PRO A 31 HOH A 214 SITE 2 AE3 11 HOH A 232 HYP B 5 GLY B 30 HYP B 32 SITE 3 AE3 11 GLY B 33 GLY C 30 GLY C 33 SITE 1 AE4 11 GLN A 23 PRO A 31 GLY A 33 HOH A 214 SITE 2 AE4 11 HOH A 232 HYP B 5 GLY B 33 PRO B 34 SITE 3 AE4 11 PRO C 31 PRO C 34 HOH C 211 SITE 1 AE5 13 GLY A 33 PRO A 34 HYP B 2 GLN B 23 SITE 2 AE5 13 GLY B 33 HYP B 35 GLY B 36 HOH B 211 SITE 3 AE5 13 GLY C 33 GLY C 36 NH2 C 37 HOH C 222 SITE 4 AE5 13 HOH C 225 SITE 1 AE6 11 ARG A 17 PRO A 34 HYP A 35 HYP B 2 SITE 2 AE6 11 GLY B 36 HOH B 211 HOH B 224 PRO C 34 SITE 3 AE6 11 NH2 C 37 HOH C 222 HOH C 225 SITE 1 AE7 8 ARG A 17 PRO A 34 HYP A 35 GLY A 36 SITE 2 AE7 8 GLY B 36 HOH B 224 PRO C 34 HYP C 35 CRYST1 31.970 23.640 107.939 90.00 92.70 90.00 I 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.031279 0.000000 0.001476 0.00000 SCALE2 0.000000 0.042301 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009275 0.00000 HETATM 1 C ACE A 0 28.647 -0.391 -39.319 1.00 21.55 C ANISOU 1 C ACE A 0 2380 3461 2350 329 1062 -659 C HETATM 2 O ACE A 0 27.731 -1.215 -39.209 1.00 21.70 O ANISOU 2 O ACE A 0 2623 3169 2452 427 1186 -836 O HETATM 3 CH3 ACE A 0 28.893 0.363 -40.595 1.00 25.05 C ANISOU 3 CH3 ACE A 0 3076 4235 2206 893 1028 -605 C HETATM 4 H1 ACE A 0 28.992 1.426 -40.376 1.00 30.06 H HETATM 5 H2 ACE A 0 29.810 0.001 -41.060 1.00 30.06 H HETATM 6 H3 ACE A 0 28.056 0.209 -41.275 1.00 30.06 H